Multiple sequence alignment - TraesCS5D01G465600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G465600 chr5D 100.000 2481 0 0 1 2481 508159256 508156776 0.000000e+00 4582.0
1 TraesCS5D01G465600 chr5D 87.248 298 24 4 1469 1765 508179728 508179444 6.620000e-86 327.0
2 TraesCS5D01G465600 chr5D 97.222 108 3 0 158 265 383645480 383645373 1.520000e-42 183.0
3 TraesCS5D01G465600 chr5D 88.000 125 15 0 438 562 354807335 354807211 5.530000e-32 148.0
4 TraesCS5D01G465600 chr5B 91.029 1059 43 19 745 1762 638781826 638782873 0.000000e+00 1382.0
5 TraesCS5D01G465600 chr5B 87.176 811 49 25 753 1543 638764459 638765234 0.000000e+00 870.0
6 TraesCS5D01G465600 chr5B 92.857 154 11 0 1533 1686 638765487 638765640 8.930000e-55 224.0
7 TraesCS5D01G465600 chr5B 91.411 163 13 1 557 719 638762681 638762842 3.210000e-54 222.0
8 TraesCS5D01G465600 chr5B 88.406 138 11 5 137 269 354289957 354290094 7.100000e-36 161.0
9 TraesCS5D01G465600 chr5B 89.256 121 5 4 1 118 638758465 638758580 7.150000e-31 145.0
10 TraesCS5D01G465600 chr5B 88.889 108 11 1 557 663 638781872 638781979 5.570000e-27 132.0
11 TraesCS5D01G465600 chr5B 87.736 106 7 5 745 849 638763810 638763910 4.330000e-23 119.0
12 TraesCS5D01G465600 chr5A 89.130 1058 55 20 745 1764 635905595 635904560 0.000000e+00 1262.0
13 TraesCS5D01G465600 chr5A 90.614 554 34 9 1075 1623 635897905 635897365 0.000000e+00 719.0
14 TraesCS5D01G465600 chr5A 86.103 331 28 10 745 1064 635899642 635899319 8.500000e-90 340.0
15 TraesCS5D01G465600 chr5A 92.000 150 12 0 1616 1765 635891141 635890992 6.950000e-51 211.0
16 TraesCS5D01G465600 chr5A 93.913 115 5 2 153 265 312272798 312272684 3.280000e-39 172.0
17 TraesCS5D01G465600 chr5A 86.452 155 17 2 557 707 635899774 635899620 1.530000e-37 167.0
18 TraesCS5D01G465600 chr5A 91.597 119 7 2 557 672 635901432 635901314 7.100000e-36 161.0
19 TraesCS5D01G465600 chr5A 90.909 121 3 3 1 118 635910034 635909919 3.300000e-34 156.0
20 TraesCS5D01G465600 chr5A 89.167 120 13 0 436 555 205012184 205012303 1.540000e-32 150.0
21 TraesCS5D01G465600 chr5A 81.765 170 17 10 743 902 635899736 635899571 2.000000e-26 130.0
22 TraesCS5D01G465600 chr5A 90.361 83 8 0 625 707 635899793 635899711 2.610000e-20 110.0
23 TraesCS5D01G465600 chr2D 95.700 721 27 4 1765 2481 276935675 276936395 0.000000e+00 1157.0
24 TraesCS5D01G465600 chr2D 94.429 718 37 3 1766 2481 285350083 285349367 0.000000e+00 1101.0
25 TraesCS5D01G465600 chr2D 94.282 717 37 3 1766 2481 566485202 566485915 0.000000e+00 1094.0
26 TraesCS5D01G465600 chr2D 91.034 145 9 4 250 394 591951771 591951911 2.520000e-45 193.0
27 TraesCS5D01G465600 chr2D 93.750 112 7 0 158 269 50240041 50239930 4.240000e-38 169.0
28 TraesCS5D01G465600 chr2D 87.023 131 17 0 436 566 270957803 270957673 5.530000e-32 148.0
29 TraesCS5D01G465600 chr7D 94.730 721 33 5 1766 2481 145918975 145919695 0.000000e+00 1116.0
30 TraesCS5D01G465600 chr7D 94.175 721 37 4 1766 2481 616464835 616465555 0.000000e+00 1094.0
31 TraesCS5D01G465600 chr6D 94.708 718 36 2 1766 2481 464697138 464696421 0.000000e+00 1114.0
32 TraesCS5D01G465600 chr6D 94.044 722 39 4 1763 2481 446133053 446133773 0.000000e+00 1092.0
33 TraesCS5D01G465600 chr6D 91.870 123 8 2 145 265 141446547 141446425 1.180000e-38 171.0
34 TraesCS5D01G465600 chr6D 92.982 114 8 0 444 557 470385518 470385405 1.530000e-37 167.0
35 TraesCS5D01G465600 chr6D 89.516 124 13 0 436 559 84966789 84966666 9.190000e-35 158.0
36 TraesCS5D01G465600 chr6D 90.000 120 10 2 449 567 328108475 328108357 1.190000e-33 154.0
37 TraesCS5D01G465600 chr6D 87.179 78 7 3 371 446 57997716 57997792 4.400000e-13 86.1
38 TraesCS5D01G465600 chr4D 94.715 719 33 4 1766 2481 369876352 369877068 0.000000e+00 1112.0
39 TraesCS5D01G465600 chr4D 94.298 719 36 4 1766 2481 369860228 369859512 0.000000e+00 1096.0
40 TraesCS5D01G465600 chr4D 85.113 309 27 10 158 447 29833242 29832934 5.190000e-77 298.0
41 TraesCS5D01G465600 chr4D 88.550 131 15 0 436 566 250268052 250267922 2.550000e-35 159.0
42 TraesCS5D01G465600 chr2B 82.578 287 42 8 158 439 118834031 118833748 1.910000e-61 246.0
43 TraesCS5D01G465600 chr2B 85.492 193 23 5 262 451 185105064 185104874 1.950000e-46 196.0
44 TraesCS5D01G465600 chr2B 95.370 108 5 0 158 265 175068705 175068598 3.280000e-39 172.0
45 TraesCS5D01G465600 chr3D 96.183 131 5 0 261 391 267286538 267286408 5.370000e-52 215.0
46 TraesCS5D01G465600 chr7B 94.118 136 6 2 260 394 678632489 678632355 3.230000e-49 206.0
47 TraesCS5D01G465600 chr6B 92.857 140 9 1 260 399 153239876 153239738 4.180000e-48 202.0
48 TraesCS5D01G465600 chr6B 88.710 124 14 0 436 559 161881330 161881453 4.270000e-33 152.0
49 TraesCS5D01G465600 chr6B 92.857 56 3 1 388 442 140419982 140420037 2.050000e-11 80.5
50 TraesCS5D01G465600 chr6B 92.857 56 3 1 388 442 140430501 140430556 2.050000e-11 80.5
51 TraesCS5D01G465600 chr6B 92.857 56 3 1 388 442 140447102 140447157 2.050000e-11 80.5
52 TraesCS5D01G465600 chr4B 91.667 144 12 0 261 404 56414367 56414510 1.500000e-47 200.0
53 TraesCS5D01G465600 chr4B 93.443 122 6 2 145 265 7036950 7037070 1.960000e-41 180.0
54 TraesCS5D01G465600 chr1B 85.246 183 20 5 216 393 434748689 434748509 5.450000e-42 182.0
55 TraesCS5D01G465600 chr1A 89.516 124 13 0 436 559 36568055 36568178 9.190000e-35 158.0
56 TraesCS5D01G465600 chr4A 75.532 282 45 14 163 437 720134350 720134614 1.560000e-22 117.0
57 TraesCS5D01G465600 chr3A 83.333 114 16 2 1199 1312 36500215 36500105 4.370000e-18 102.0
58 TraesCS5D01G465600 chr3A 92.857 56 3 1 388 442 265180853 265180908 2.050000e-11 80.5
59 TraesCS5D01G465600 chr3A 83.117 77 13 0 1595 1671 36498818 36498742 1.230000e-08 71.3
60 TraesCS5D01G465600 chr3B 92.857 56 3 1 388 442 299794580 299794635 2.050000e-11 80.5
61 TraesCS5D01G465600 chr3B 91.379 58 4 1 388 444 18828201 18828144 7.360000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G465600 chr5D 508156776 508159256 2480 True 4582.000000 4582 100.000000 1 2481 1 chr5D.!!$R3 2480
1 TraesCS5D01G465600 chr5B 638781826 638782873 1047 False 757.000000 1382 89.959000 557 1762 2 chr5B.!!$F4 1205
2 TraesCS5D01G465600 chr5B 638762681 638765640 2959 False 358.750000 870 89.795000 557 1686 4 chr5B.!!$F3 1129
3 TraesCS5D01G465600 chr5A 635897365 635905595 8230 True 412.714286 1262 88.003143 557 1764 7 chr5A.!!$R4 1207
4 TraesCS5D01G465600 chr2D 276935675 276936395 720 False 1157.000000 1157 95.700000 1765 2481 1 chr2D.!!$F1 716
5 TraesCS5D01G465600 chr2D 285349367 285350083 716 True 1101.000000 1101 94.429000 1766 2481 1 chr2D.!!$R3 715
6 TraesCS5D01G465600 chr2D 566485202 566485915 713 False 1094.000000 1094 94.282000 1766 2481 1 chr2D.!!$F2 715
7 TraesCS5D01G465600 chr7D 145918975 145919695 720 False 1116.000000 1116 94.730000 1766 2481 1 chr7D.!!$F1 715
8 TraesCS5D01G465600 chr7D 616464835 616465555 720 False 1094.000000 1094 94.175000 1766 2481 1 chr7D.!!$F2 715
9 TraesCS5D01G465600 chr6D 464696421 464697138 717 True 1114.000000 1114 94.708000 1766 2481 1 chr6D.!!$R4 715
10 TraesCS5D01G465600 chr6D 446133053 446133773 720 False 1092.000000 1092 94.044000 1763 2481 1 chr6D.!!$F2 718
11 TraesCS5D01G465600 chr4D 369876352 369877068 716 False 1112.000000 1112 94.715000 1766 2481 1 chr4D.!!$F1 715
12 TraesCS5D01G465600 chr4D 369859512 369860228 716 True 1096.000000 1096 94.298000 1766 2481 1 chr4D.!!$R3 715

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.037447 GCTGAAGAACTGAAGGGCCT 59.963 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 2031 0.10741 TGAAAACTGACGTGTGGGCT 60.107 50.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.349488 GGACCAGTGTTTTACTTGCAC 57.651 47.619 0.00 0.00 37.60 4.57
21 22 2.286772 GGACCAGTGTTTTACTTGCACG 60.287 50.000 0.00 0.00 37.60 5.34
22 23 1.673920 ACCAGTGTTTTACTTGCACGG 59.326 47.619 0.00 0.00 37.60 4.94
23 24 1.001815 CCAGTGTTTTACTTGCACGGG 60.002 52.381 0.00 0.00 40.74 5.28
24 25 1.944024 CAGTGTTTTACTTGCACGGGA 59.056 47.619 0.00 0.00 37.60 5.14
25 26 1.944709 AGTGTTTTACTTGCACGGGAC 59.055 47.619 0.00 0.00 35.67 4.46
49 50 1.590147 GGGACGGCTATATCCACGG 59.410 63.158 0.00 0.00 36.65 4.94
50 51 1.183676 GGGACGGCTATATCCACGGT 61.184 60.000 0.00 0.00 36.65 4.83
51 52 0.243095 GGACGGCTATATCCACGGTC 59.757 60.000 0.00 0.00 34.87 4.79
52 53 0.243095 GACGGCTATATCCACGGTCC 59.757 60.000 0.00 0.00 0.00 4.46
53 54 0.468585 ACGGCTATATCCACGGTCCA 60.469 55.000 0.00 0.00 0.00 4.02
54 55 0.038526 CGGCTATATCCACGGTCCAC 60.039 60.000 0.00 0.00 0.00 4.02
55 56 0.320697 GGCTATATCCACGGTCCACC 59.679 60.000 0.00 0.00 0.00 4.61
56 57 1.339097 GCTATATCCACGGTCCACCT 58.661 55.000 0.00 0.00 0.00 4.00
57 58 1.000955 GCTATATCCACGGTCCACCTG 59.999 57.143 0.00 0.00 0.00 4.00
58 59 1.000955 CTATATCCACGGTCCACCTGC 59.999 57.143 0.00 0.00 0.00 4.85
59 60 0.980754 ATATCCACGGTCCACCTGCA 60.981 55.000 0.00 0.00 0.00 4.41
60 61 0.980754 TATCCACGGTCCACCTGCAT 60.981 55.000 0.00 0.00 0.00 3.96
61 62 2.257409 ATCCACGGTCCACCTGCATC 62.257 60.000 0.00 0.00 0.00 3.91
62 63 2.665000 CACGGTCCACCTGCATCT 59.335 61.111 0.00 0.00 0.00 2.90
63 64 1.003355 CACGGTCCACCTGCATCTT 60.003 57.895 0.00 0.00 0.00 2.40
64 65 0.606401 CACGGTCCACCTGCATCTTT 60.606 55.000 0.00 0.00 0.00 2.52
65 66 0.606401 ACGGTCCACCTGCATCTTTG 60.606 55.000 0.00 0.00 0.00 2.77
66 67 0.606401 CGGTCCACCTGCATCTTTGT 60.606 55.000 0.00 0.00 0.00 2.83
67 68 0.883833 GGTCCACCTGCATCTTTGTG 59.116 55.000 0.00 0.00 0.00 3.33
68 69 1.609208 GTCCACCTGCATCTTTGTGT 58.391 50.000 0.00 0.00 0.00 3.72
69 70 1.267806 GTCCACCTGCATCTTTGTGTG 59.732 52.381 0.00 0.00 0.00 3.82
70 71 0.038892 CCACCTGCATCTTTGTGTGC 60.039 55.000 0.00 0.00 41.61 4.57
71 72 0.956633 CACCTGCATCTTTGTGTGCT 59.043 50.000 0.00 0.00 41.78 4.40
72 73 0.956633 ACCTGCATCTTTGTGTGCTG 59.043 50.000 0.00 0.00 41.78 4.41
73 74 1.241165 CCTGCATCTTTGTGTGCTGA 58.759 50.000 5.91 0.00 41.16 4.26
74 75 1.610038 CCTGCATCTTTGTGTGCTGAA 59.390 47.619 5.91 0.00 41.16 3.02
75 76 2.351447 CCTGCATCTTTGTGTGCTGAAG 60.351 50.000 5.91 0.00 41.16 3.02
76 77 2.551032 CTGCATCTTTGTGTGCTGAAGA 59.449 45.455 0.00 0.00 41.16 2.87
77 78 2.950975 TGCATCTTTGTGTGCTGAAGAA 59.049 40.909 0.00 0.00 41.78 2.52
78 79 3.243168 TGCATCTTTGTGTGCTGAAGAAC 60.243 43.478 0.00 0.00 41.78 3.01
79 80 3.004106 GCATCTTTGTGTGCTGAAGAACT 59.996 43.478 0.00 0.00 38.30 3.01
80 81 4.534168 CATCTTTGTGTGCTGAAGAACTG 58.466 43.478 0.00 0.00 33.56 3.16
81 82 3.872696 TCTTTGTGTGCTGAAGAACTGA 58.127 40.909 0.00 0.00 0.00 3.41
82 83 4.260985 TCTTTGTGTGCTGAAGAACTGAA 58.739 39.130 0.00 0.00 0.00 3.02
83 84 4.333649 TCTTTGTGTGCTGAAGAACTGAAG 59.666 41.667 0.00 0.00 0.00 3.02
84 85 2.564771 TGTGTGCTGAAGAACTGAAGG 58.435 47.619 0.00 0.00 0.00 3.46
85 86 1.876156 GTGTGCTGAAGAACTGAAGGG 59.124 52.381 0.00 0.00 0.00 3.95
86 87 0.877743 GTGCTGAAGAACTGAAGGGC 59.122 55.000 0.00 0.00 0.00 5.19
87 88 0.250901 TGCTGAAGAACTGAAGGGCC 60.251 55.000 0.00 0.00 0.00 5.80
88 89 0.037447 GCTGAAGAACTGAAGGGCCT 59.963 55.000 0.00 0.00 0.00 5.19
89 90 1.948144 GCTGAAGAACTGAAGGGCCTC 60.948 57.143 6.46 0.56 0.00 4.70
90 91 1.349026 CTGAAGAACTGAAGGGCCTCA 59.651 52.381 6.46 5.98 0.00 3.86
91 92 1.349026 TGAAGAACTGAAGGGCCTCAG 59.651 52.381 23.16 23.16 46.94 3.35
92 93 0.695347 AAGAACTGAAGGGCCTCAGG 59.305 55.000 26.24 14.87 46.02 3.86
93 94 0.474660 AGAACTGAAGGGCCTCAGGT 60.475 55.000 26.24 23.12 46.24 4.00
94 95 2.070639 AACTGAAGGGCCTCAGGTC 58.929 57.895 26.24 14.73 39.19 3.85
95 96 0.768221 AACTGAAGGGCCTCAGGTCA 60.768 55.000 26.24 17.85 39.19 4.02
96 97 1.197430 ACTGAAGGGCCTCAGGTCAG 61.197 60.000 24.74 24.74 46.02 3.51
97 98 2.270527 GAAGGGCCTCAGGTCAGC 59.729 66.667 6.46 0.00 0.00 4.26
98 99 3.334054 AAGGGCCTCAGGTCAGCC 61.334 66.667 6.46 0.00 46.37 4.85
101 102 4.416738 GGCCTCAGGTCAGCCACC 62.417 72.222 0.00 0.00 46.34 4.61
111 112 2.514803 GGTCAGCCACCACAATAAAGT 58.485 47.619 0.00 0.00 45.98 2.66
112 113 2.488153 GGTCAGCCACCACAATAAAGTC 59.512 50.000 0.00 0.00 45.98 3.01
113 114 3.146066 GTCAGCCACCACAATAAAGTCA 58.854 45.455 0.00 0.00 0.00 3.41
114 115 3.568007 GTCAGCCACCACAATAAAGTCAA 59.432 43.478 0.00 0.00 0.00 3.18
115 116 3.820467 TCAGCCACCACAATAAAGTCAAG 59.180 43.478 0.00 0.00 0.00 3.02
116 117 3.820467 CAGCCACCACAATAAAGTCAAGA 59.180 43.478 0.00 0.00 0.00 3.02
117 118 4.278170 CAGCCACCACAATAAAGTCAAGAA 59.722 41.667 0.00 0.00 0.00 2.52
118 119 4.892934 AGCCACCACAATAAAGTCAAGAAA 59.107 37.500 0.00 0.00 0.00 2.52
119 120 5.362430 AGCCACCACAATAAAGTCAAGAAAA 59.638 36.000 0.00 0.00 0.00 2.29
120 121 6.045955 GCCACCACAATAAAGTCAAGAAAAA 58.954 36.000 0.00 0.00 0.00 1.94
121 122 6.200854 GCCACCACAATAAAGTCAAGAAAAAG 59.799 38.462 0.00 0.00 0.00 2.27
122 123 7.264947 CCACCACAATAAAGTCAAGAAAAAGT 58.735 34.615 0.00 0.00 0.00 2.66
123 124 7.222611 CCACCACAATAAAGTCAAGAAAAAGTG 59.777 37.037 0.00 0.00 0.00 3.16
124 125 7.973388 CACCACAATAAAGTCAAGAAAAAGTGA 59.027 33.333 0.00 0.00 0.00 3.41
125 126 8.527810 ACCACAATAAAGTCAAGAAAAAGTGAA 58.472 29.630 0.00 0.00 0.00 3.18
126 127 9.023967 CCACAATAAAGTCAAGAAAAAGTGAAG 57.976 33.333 0.00 0.00 0.00 3.02
127 128 9.787532 CACAATAAAGTCAAGAAAAAGTGAAGA 57.212 29.630 0.00 0.00 0.00 2.87
133 134 8.567285 AAGTCAAGAAAAAGTGAAGAAAGAGA 57.433 30.769 0.00 0.00 0.00 3.10
134 135 8.744568 AGTCAAGAAAAAGTGAAGAAAGAGAT 57.255 30.769 0.00 0.00 0.00 2.75
135 136 9.838339 AGTCAAGAAAAAGTGAAGAAAGAGATA 57.162 29.630 0.00 0.00 0.00 1.98
177 178 9.828039 AAAGTACCCTTCGTTCCTAAATATAAG 57.172 33.333 0.00 0.00 0.00 1.73
178 179 8.544687 AGTACCCTTCGTTCCTAAATATAAGT 57.455 34.615 0.00 0.00 0.00 2.24
179 180 8.637099 AGTACCCTTCGTTCCTAAATATAAGTC 58.363 37.037 0.00 0.00 0.00 3.01
180 181 7.672122 ACCCTTCGTTCCTAAATATAAGTCT 57.328 36.000 0.00 0.00 0.00 3.24
181 182 8.087303 ACCCTTCGTTCCTAAATATAAGTCTT 57.913 34.615 0.00 0.00 0.00 3.01
182 183 8.546322 ACCCTTCGTTCCTAAATATAAGTCTTT 58.454 33.333 0.00 0.00 0.00 2.52
183 184 9.392259 CCCTTCGTTCCTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
200 201 8.535690 AAGTCTTTTTAGAGATTTCACTACGG 57.464 34.615 0.00 0.00 0.00 4.02
201 202 7.893658 AGTCTTTTTAGAGATTTCACTACGGA 58.106 34.615 0.00 0.00 0.00 4.69
202 203 8.030106 AGTCTTTTTAGAGATTTCACTACGGAG 58.970 37.037 0.00 0.00 0.00 4.63
204 205 9.017509 TCTTTTTAGAGATTTCACTACGGAGTA 57.982 33.333 0.00 0.00 45.11 2.59
205 206 9.804758 CTTTTTAGAGATTTCACTACGGAGTAT 57.195 33.333 0.00 0.00 44.56 2.12
210 211 8.254178 AGAGATTTCACTACGGAGTATATACG 57.746 38.462 0.00 0.00 44.56 3.06
211 212 7.333921 AGAGATTTCACTACGGAGTATATACGG 59.666 40.741 0.00 4.06 44.56 4.02
212 213 7.164122 AGATTTCACTACGGAGTATATACGGA 58.836 38.462 0.00 0.00 44.56 4.69
213 214 6.791887 TTTCACTACGGAGTATATACGGAG 57.208 41.667 0.00 4.77 44.56 4.63
214 215 4.248859 TCACTACGGAGTATATACGGAGC 58.751 47.826 0.00 0.00 44.56 4.70
215 216 3.999001 CACTACGGAGTATATACGGAGCA 59.001 47.826 0.00 0.00 44.56 4.26
216 217 4.453478 CACTACGGAGTATATACGGAGCAA 59.547 45.833 0.00 0.00 44.56 3.91
217 218 5.049198 CACTACGGAGTATATACGGAGCAAA 60.049 44.000 0.00 0.00 44.56 3.68
218 219 4.924305 ACGGAGTATATACGGAGCAAAA 57.076 40.909 7.23 0.00 41.94 2.44
219 220 5.464030 ACGGAGTATATACGGAGCAAAAT 57.536 39.130 7.23 0.00 41.94 1.82
220 221 5.227908 ACGGAGTATATACGGAGCAAAATG 58.772 41.667 7.23 0.00 41.94 2.32
221 222 4.625742 CGGAGTATATACGGAGCAAAATGG 59.374 45.833 7.23 0.00 0.00 3.16
222 223 5.566032 CGGAGTATATACGGAGCAAAATGGA 60.566 44.000 7.23 0.00 0.00 3.41
223 224 6.407202 GGAGTATATACGGAGCAAAATGGAT 58.593 40.000 7.23 0.00 0.00 3.41
224 225 6.313905 GGAGTATATACGGAGCAAAATGGATG 59.686 42.308 7.23 0.00 0.00 3.51
225 226 7.004555 AGTATATACGGAGCAAAATGGATGA 57.995 36.000 7.23 0.00 0.00 2.92
226 227 7.450074 AGTATATACGGAGCAAAATGGATGAA 58.550 34.615 7.23 0.00 0.00 2.57
227 228 8.103305 AGTATATACGGAGCAAAATGGATGAAT 58.897 33.333 7.23 0.00 0.00 2.57
228 229 5.695851 ATACGGAGCAAAATGGATGAATC 57.304 39.130 0.00 0.00 0.00 2.52
229 230 3.624777 ACGGAGCAAAATGGATGAATCT 58.375 40.909 0.00 0.00 0.00 2.40
230 231 4.780815 ACGGAGCAAAATGGATGAATCTA 58.219 39.130 0.00 0.00 0.00 1.98
231 232 4.576463 ACGGAGCAAAATGGATGAATCTAC 59.424 41.667 0.00 0.00 0.00 2.59
232 233 4.576053 CGGAGCAAAATGGATGAATCTACA 59.424 41.667 0.00 0.00 0.00 2.74
233 234 5.504665 CGGAGCAAAATGGATGAATCTACAC 60.505 44.000 0.00 0.00 0.00 2.90
234 235 5.591877 GGAGCAAAATGGATGAATCTACACT 59.408 40.000 0.00 0.00 0.00 3.55
235 236 6.238593 GGAGCAAAATGGATGAATCTACACTC 60.239 42.308 0.00 0.00 0.00 3.51
236 237 6.421485 AGCAAAATGGATGAATCTACACTCT 58.579 36.000 0.00 0.00 0.00 3.24
237 238 7.568349 AGCAAAATGGATGAATCTACACTCTA 58.432 34.615 0.00 0.00 0.00 2.43
238 239 8.049117 AGCAAAATGGATGAATCTACACTCTAA 58.951 33.333 0.00 0.00 0.00 2.10
239 240 8.677300 GCAAAATGGATGAATCTACACTCTAAA 58.323 33.333 0.00 0.00 0.00 1.85
272 273 2.595238 ACATCCGTATGTACTCCCTCC 58.405 52.381 0.00 0.00 44.66 4.30
273 274 2.091499 ACATCCGTATGTACTCCCTCCA 60.091 50.000 0.00 0.00 44.66 3.86
274 275 3.165875 CATCCGTATGTACTCCCTCCAT 58.834 50.000 0.00 0.00 0.00 3.41
275 276 2.872732 TCCGTATGTACTCCCTCCATC 58.127 52.381 0.00 0.00 0.00 3.51
276 277 1.893801 CCGTATGTACTCCCTCCATCC 59.106 57.143 0.00 0.00 0.00 3.51
277 278 1.893801 CGTATGTACTCCCTCCATCCC 59.106 57.143 0.00 0.00 0.00 3.85
278 279 2.755208 CGTATGTACTCCCTCCATCCCA 60.755 54.545 0.00 0.00 0.00 4.37
279 280 2.587060 ATGTACTCCCTCCATCCCAA 57.413 50.000 0.00 0.00 0.00 4.12
280 281 2.352561 TGTACTCCCTCCATCCCAAA 57.647 50.000 0.00 0.00 0.00 3.28
281 282 2.638325 TGTACTCCCTCCATCCCAAAA 58.362 47.619 0.00 0.00 0.00 2.44
282 283 3.197983 TGTACTCCCTCCATCCCAAAAT 58.802 45.455 0.00 0.00 0.00 1.82
283 284 3.596046 TGTACTCCCTCCATCCCAAAATT 59.404 43.478 0.00 0.00 0.00 1.82
284 285 4.791334 TGTACTCCCTCCATCCCAAAATTA 59.209 41.667 0.00 0.00 0.00 1.40
285 286 5.435041 TGTACTCCCTCCATCCCAAAATTAT 59.565 40.000 0.00 0.00 0.00 1.28
286 287 5.487861 ACTCCCTCCATCCCAAAATTATT 57.512 39.130 0.00 0.00 0.00 1.40
287 288 5.211201 ACTCCCTCCATCCCAAAATTATTG 58.789 41.667 0.00 0.00 0.00 1.90
288 289 5.211201 CTCCCTCCATCCCAAAATTATTGT 58.789 41.667 0.00 0.00 0.00 2.71
289 290 5.208121 TCCCTCCATCCCAAAATTATTGTC 58.792 41.667 0.00 0.00 0.00 3.18
290 291 5.043432 TCCCTCCATCCCAAAATTATTGTCT 60.043 40.000 0.00 0.00 0.00 3.41
291 292 5.662657 CCCTCCATCCCAAAATTATTGTCTT 59.337 40.000 0.00 0.00 0.00 3.01
292 293 6.838612 CCCTCCATCCCAAAATTATTGTCTTA 59.161 38.462 0.00 0.00 0.00 2.10
293 294 7.344352 CCCTCCATCCCAAAATTATTGTCTTAA 59.656 37.037 0.00 0.00 0.00 1.85
294 295 8.757877 CCTCCATCCCAAAATTATTGTCTTAAA 58.242 33.333 0.00 0.00 0.00 1.52
320 321 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
321 322 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
322 323 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
323 324 8.638873 TGTCTAAATACGGATGTATCAAGTCAT 58.361 33.333 0.00 0.00 40.42 3.06
324 325 8.916654 GTCTAAATACGGATGTATCAAGTCATG 58.083 37.037 0.00 0.00 40.42 3.07
325 326 8.638873 TCTAAATACGGATGTATCAAGTCATGT 58.361 33.333 0.00 0.00 40.42 3.21
326 327 9.261180 CTAAATACGGATGTATCAAGTCATGTT 57.739 33.333 0.00 0.00 40.42 2.71
327 328 8.506168 AAATACGGATGTATCAAGTCATGTTT 57.494 30.769 0.00 0.00 40.42 2.83
328 329 8.506168 AATACGGATGTATCAAGTCATGTTTT 57.494 30.769 0.00 0.00 40.42 2.43
329 330 9.607988 AATACGGATGTATCAAGTCATGTTTTA 57.392 29.630 0.00 0.00 40.42 1.52
330 331 7.539712 ACGGATGTATCAAGTCATGTTTTAG 57.460 36.000 0.00 0.00 0.00 1.85
331 332 7.103641 ACGGATGTATCAAGTCATGTTTTAGT 58.896 34.615 0.00 0.00 0.00 2.24
332 333 8.255206 ACGGATGTATCAAGTCATGTTTTAGTA 58.745 33.333 0.00 0.00 0.00 1.82
333 334 9.261180 CGGATGTATCAAGTCATGTTTTAGTAT 57.739 33.333 0.00 0.00 0.00 2.12
377 378 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
378 379 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
379 380 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
380 381 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
381 382 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
382 383 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
383 384 4.034285 AGACAAGAATTTTGGGACGGAT 57.966 40.909 0.00 0.00 0.00 4.18
384 385 3.758554 AGACAAGAATTTTGGGACGGATG 59.241 43.478 0.00 0.00 0.00 3.51
385 386 2.825532 ACAAGAATTTTGGGACGGATGG 59.174 45.455 0.00 0.00 0.00 3.51
386 387 3.088532 CAAGAATTTTGGGACGGATGGA 58.911 45.455 0.00 0.00 0.00 3.41
387 388 3.004752 AGAATTTTGGGACGGATGGAG 57.995 47.619 0.00 0.00 0.00 3.86
388 389 2.308866 AGAATTTTGGGACGGATGGAGT 59.691 45.455 0.00 0.00 0.00 3.85
389 390 3.521937 AGAATTTTGGGACGGATGGAGTA 59.478 43.478 0.00 0.00 0.00 2.59
390 391 3.560636 ATTTTGGGACGGATGGAGTAG 57.439 47.619 0.00 0.00 0.00 2.57
391 392 1.946984 TTTGGGACGGATGGAGTAGT 58.053 50.000 0.00 0.00 0.00 2.73
392 393 1.946984 TTGGGACGGATGGAGTAGTT 58.053 50.000 0.00 0.00 0.00 2.24
393 394 1.946984 TGGGACGGATGGAGTAGTTT 58.053 50.000 0.00 0.00 0.00 2.66
394 395 1.553248 TGGGACGGATGGAGTAGTTTG 59.447 52.381 0.00 0.00 0.00 2.93
395 396 1.553704 GGGACGGATGGAGTAGTTTGT 59.446 52.381 0.00 0.00 0.00 2.83
396 397 2.762327 GGGACGGATGGAGTAGTTTGTA 59.238 50.000 0.00 0.00 0.00 2.41
397 398 3.387050 GGGACGGATGGAGTAGTTTGTAT 59.613 47.826 0.00 0.00 0.00 2.29
398 399 4.141779 GGGACGGATGGAGTAGTTTGTATT 60.142 45.833 0.00 0.00 0.00 1.89
399 400 5.069516 GGGACGGATGGAGTAGTTTGTATTA 59.930 44.000 0.00 0.00 0.00 0.98
400 401 6.407299 GGGACGGATGGAGTAGTTTGTATTAA 60.407 42.308 0.00 0.00 0.00 1.40
401 402 7.043565 GGACGGATGGAGTAGTTTGTATTAAA 58.956 38.462 0.00 0.00 0.00 1.52
402 403 7.550196 GGACGGATGGAGTAGTTTGTATTAAAA 59.450 37.037 0.00 0.00 0.00 1.52
403 404 9.106070 GACGGATGGAGTAGTTTGTATTAAAAT 57.894 33.333 0.00 0.00 0.00 1.82
404 405 9.106070 ACGGATGGAGTAGTTTGTATTAAAATC 57.894 33.333 0.00 0.00 0.00 2.17
405 406 8.557029 CGGATGGAGTAGTTTGTATTAAAATCC 58.443 37.037 0.00 0.00 0.00 3.01
406 407 9.628500 GGATGGAGTAGTTTGTATTAAAATCCT 57.372 33.333 0.00 0.00 0.00 3.24
433 434 9.780186 AGAAAGATTTATATTTAGGAACGGAGG 57.220 33.333 0.00 0.00 0.00 4.30
434 435 8.919777 AAAGATTTATATTTAGGAACGGAGGG 57.080 34.615 0.00 0.00 0.00 4.30
435 436 7.867160 AGATTTATATTTAGGAACGGAGGGA 57.133 36.000 0.00 0.00 0.00 4.20
436 437 7.908453 AGATTTATATTTAGGAACGGAGGGAG 58.092 38.462 0.00 0.00 0.00 4.30
437 438 7.513091 AGATTTATATTTAGGAACGGAGGGAGT 59.487 37.037 0.00 0.00 0.00 3.85
438 439 8.731591 ATTTATATTTAGGAACGGAGGGAGTA 57.268 34.615 0.00 0.00 0.00 2.59
439 440 7.771927 TTATATTTAGGAACGGAGGGAGTAG 57.228 40.000 0.00 0.00 0.00 2.57
440 441 3.463048 TTTAGGAACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
441 442 4.591321 TTTAGGAACGGAGGGAGTAGTA 57.409 45.455 0.00 0.00 0.00 1.82
442 443 2.732844 AGGAACGGAGGGAGTAGTAG 57.267 55.000 0.00 0.00 0.00 2.57
443 444 1.921748 AGGAACGGAGGGAGTAGTAGT 59.078 52.381 0.00 0.00 0.00 2.73
444 445 2.022934 GGAACGGAGGGAGTAGTAGTG 58.977 57.143 0.00 0.00 0.00 2.74
445 446 2.620108 GGAACGGAGGGAGTAGTAGTGT 60.620 54.545 0.00 0.00 0.00 3.55
446 447 3.370953 GGAACGGAGGGAGTAGTAGTGTA 60.371 52.174 0.00 0.00 0.00 2.90
447 448 4.265073 GAACGGAGGGAGTAGTAGTGTAA 58.735 47.826 0.00 0.00 0.00 2.41
448 449 4.516652 ACGGAGGGAGTAGTAGTGTAAT 57.483 45.455 0.00 0.00 0.00 1.89
449 450 5.636903 ACGGAGGGAGTAGTAGTGTAATA 57.363 43.478 0.00 0.00 0.00 0.98
450 451 5.619220 ACGGAGGGAGTAGTAGTGTAATAG 58.381 45.833 0.00 0.00 0.00 1.73
451 452 4.455190 CGGAGGGAGTAGTAGTGTAATAGC 59.545 50.000 0.00 0.00 0.00 2.97
452 453 4.766373 GGAGGGAGTAGTAGTGTAATAGCC 59.234 50.000 0.00 0.00 0.00 3.93
453 454 5.383476 GAGGGAGTAGTAGTGTAATAGCCA 58.617 45.833 0.00 0.00 0.00 4.75
454 455 5.774179 AGGGAGTAGTAGTGTAATAGCCAA 58.226 41.667 0.00 0.00 0.00 4.52
455 456 5.597594 AGGGAGTAGTAGTGTAATAGCCAAC 59.402 44.000 0.00 0.00 0.00 3.77
456 457 5.221402 GGGAGTAGTAGTGTAATAGCCAACC 60.221 48.000 0.00 0.00 0.00 3.77
457 458 5.597594 GGAGTAGTAGTGTAATAGCCAACCT 59.402 44.000 0.00 0.00 0.00 3.50
458 459 6.097981 GGAGTAGTAGTGTAATAGCCAACCTT 59.902 42.308 0.00 0.00 0.00 3.50
459 460 7.286316 GGAGTAGTAGTGTAATAGCCAACCTTA 59.714 40.741 0.00 0.00 0.00 2.69
460 461 8.779096 AGTAGTAGTGTAATAGCCAACCTTAT 57.221 34.615 0.00 0.00 0.00 1.73
461 462 9.872684 AGTAGTAGTGTAATAGCCAACCTTATA 57.127 33.333 0.00 0.00 0.00 0.98
463 464 7.668492 AGTAGTGTAATAGCCAACCTTATAGC 58.332 38.462 0.00 0.00 0.00 2.97
464 465 5.866207 AGTGTAATAGCCAACCTTATAGCC 58.134 41.667 0.00 0.00 0.00 3.93
465 466 5.001874 GTGTAATAGCCAACCTTATAGCCC 58.998 45.833 0.00 0.00 0.00 5.19
466 467 4.661240 TGTAATAGCCAACCTTATAGCCCA 59.339 41.667 0.00 0.00 0.00 5.36
467 468 3.790089 ATAGCCAACCTTATAGCCCAC 57.210 47.619 0.00 0.00 0.00 4.61
468 469 1.295020 AGCCAACCTTATAGCCCACA 58.705 50.000 0.00 0.00 0.00 4.17
469 470 1.852965 AGCCAACCTTATAGCCCACAT 59.147 47.619 0.00 0.00 0.00 3.21
470 471 2.244769 AGCCAACCTTATAGCCCACATT 59.755 45.455 0.00 0.00 0.00 2.71
471 472 3.461831 AGCCAACCTTATAGCCCACATTA 59.538 43.478 0.00 0.00 0.00 1.90
472 473 4.106341 AGCCAACCTTATAGCCCACATTAT 59.894 41.667 0.00 0.00 0.00 1.28
473 474 4.832823 GCCAACCTTATAGCCCACATTATT 59.167 41.667 0.00 0.00 0.00 1.40
474 475 5.278957 GCCAACCTTATAGCCCACATTATTG 60.279 44.000 0.00 0.00 0.00 1.90
475 476 5.833131 CCAACCTTATAGCCCACATTATTGT 59.167 40.000 0.00 0.00 36.15 2.71
476 477 7.001674 CCAACCTTATAGCCCACATTATTGTA 58.998 38.462 0.00 0.00 33.76 2.41
477 478 7.669722 CCAACCTTATAGCCCACATTATTGTAT 59.330 37.037 0.00 0.00 33.76 2.29
478 479 8.514594 CAACCTTATAGCCCACATTATTGTATG 58.485 37.037 0.00 0.00 33.76 2.39
479 480 7.175104 ACCTTATAGCCCACATTATTGTATGG 58.825 38.462 0.00 0.00 33.76 2.74
480 481 6.603201 CCTTATAGCCCACATTATTGTATGGG 59.397 42.308 3.67 3.67 40.50 4.00
481 482 3.971468 AGCCCACATTATTGTATGGGT 57.029 42.857 9.80 8.81 39.96 4.51
482 483 6.712114 ATAGCCCACATTATTGTATGGGTA 57.288 37.500 9.80 14.61 39.96 3.69
483 484 5.599048 AGCCCACATTATTGTATGGGTAT 57.401 39.130 9.80 0.00 39.96 2.73
484 485 5.570320 AGCCCACATTATTGTATGGGTATC 58.430 41.667 9.80 0.00 39.96 2.24
485 486 5.313240 AGCCCACATTATTGTATGGGTATCT 59.687 40.000 9.80 0.00 39.96 1.98
486 487 6.503924 AGCCCACATTATTGTATGGGTATCTA 59.496 38.462 9.80 0.00 39.96 1.98
487 488 7.184570 AGCCCACATTATTGTATGGGTATCTAT 59.815 37.037 9.80 0.00 39.96 1.98
488 489 8.491134 GCCCACATTATTGTATGGGTATCTATA 58.509 37.037 9.80 0.00 39.96 1.31
498 499 9.729550 TTGTATGGGTATCTATAGATTATGGCT 57.270 33.333 20.13 4.95 36.05 4.75
514 515 9.570468 AGATTATGGCTATAAATGATATGCCAG 57.430 33.333 6.60 0.00 42.53 4.85
515 516 9.347240 GATTATGGCTATAAATGATATGCCAGT 57.653 33.333 6.60 0.00 42.53 4.00
516 517 9.705103 ATTATGGCTATAAATGATATGCCAGTT 57.295 29.630 6.60 0.00 42.53 3.16
517 518 7.636150 ATGGCTATAAATGATATGCCAGTTC 57.364 36.000 10.25 0.00 42.53 3.01
518 519 5.945784 TGGCTATAAATGATATGCCAGTTCC 59.054 40.000 0.00 0.00 38.41 3.62
519 520 6.183347 GGCTATAAATGATATGCCAGTTCCT 58.817 40.000 0.00 0.00 35.77 3.36
520 521 6.660949 GGCTATAAATGATATGCCAGTTCCTT 59.339 38.462 0.00 0.00 35.77 3.36
521 522 7.829211 GGCTATAAATGATATGCCAGTTCCTTA 59.171 37.037 0.00 0.00 35.77 2.69
522 523 9.401058 GCTATAAATGATATGCCAGTTCCTTAT 57.599 33.333 0.00 0.00 0.00 1.73
525 526 7.693969 AAATGATATGCCAGTTCCTTATAGC 57.306 36.000 0.00 0.00 0.00 2.97
526 527 5.165961 TGATATGCCAGTTCCTTATAGCC 57.834 43.478 0.00 0.00 0.00 3.93
527 528 4.597075 TGATATGCCAGTTCCTTATAGCCA 59.403 41.667 0.00 0.00 0.00 4.75
528 529 5.251468 TGATATGCCAGTTCCTTATAGCCAT 59.749 40.000 0.00 0.00 0.00 4.40
529 530 3.492102 TGCCAGTTCCTTATAGCCATC 57.508 47.619 0.00 0.00 0.00 3.51
530 531 2.777114 TGCCAGTTCCTTATAGCCATCA 59.223 45.455 0.00 0.00 0.00 3.07
531 532 3.181451 TGCCAGTTCCTTATAGCCATCAG 60.181 47.826 0.00 0.00 0.00 2.90
532 533 3.181450 GCCAGTTCCTTATAGCCATCAGT 60.181 47.826 0.00 0.00 0.00 3.41
533 534 4.687219 GCCAGTTCCTTATAGCCATCAGTT 60.687 45.833 0.00 0.00 0.00 3.16
534 535 4.818546 CCAGTTCCTTATAGCCATCAGTTG 59.181 45.833 0.00 0.00 0.00 3.16
550 551 8.862325 CCATCAGTTGGCTATATTATTAACCA 57.138 34.615 0.00 0.00 39.09 3.67
551 552 9.466497 CCATCAGTTGGCTATATTATTAACCAT 57.534 33.333 0.00 0.00 39.09 3.55
553 554 8.335532 TCAGTTGGCTATATTATTAACCATGC 57.664 34.615 0.00 0.00 0.00 4.06
554 555 8.163408 TCAGTTGGCTATATTATTAACCATGCT 58.837 33.333 0.00 0.00 0.00 3.79
555 556 8.454106 CAGTTGGCTATATTATTAACCATGCTC 58.546 37.037 0.00 0.00 0.00 4.26
556 557 8.386264 AGTTGGCTATATTATTAACCATGCTCT 58.614 33.333 0.00 0.00 0.00 4.09
557 558 9.014297 GTTGGCTATATTATTAACCATGCTCTT 57.986 33.333 0.00 0.00 0.00 2.85
559 560 9.890629 TGGCTATATTATTAACCATGCTCTTAG 57.109 33.333 0.00 0.00 0.00 2.18
560 561 9.331282 GGCTATATTATTAACCATGCTCTTAGG 57.669 37.037 0.00 0.00 0.00 2.69
561 562 8.831550 GCTATATTATTAACCATGCTCTTAGGC 58.168 37.037 0.00 0.00 0.00 3.93
571 572 4.445448 CCATGCTCTTAGGCAATCTTACCT 60.445 45.833 0.04 0.00 45.68 3.08
574 575 5.671493 TGCTCTTAGGCAATCTTACCTTAC 58.329 41.667 0.00 0.00 39.43 2.34
602 603 3.931907 ACCCGATCTGATTTGGATTGA 57.068 42.857 11.86 0.00 0.00 2.57
665 666 5.841957 TTAGACAATCTTACCCTACCGTC 57.158 43.478 0.00 0.00 0.00 4.79
672 673 2.173519 CTTACCCTACCGTCTCAACCA 58.826 52.381 0.00 0.00 0.00 3.67
677 678 2.629051 CCTACCGTCTCAACCAAATCC 58.371 52.381 0.00 0.00 0.00 3.01
697 698 5.565592 TCCGATTTGGATTGTTGAGAATG 57.434 39.130 0.00 0.00 43.74 2.67
711 712 7.770801 TGTTGAGAATGATACGGTAAATCTG 57.229 36.000 0.00 0.00 0.00 2.90
715 716 9.613428 TTGAGAATGATACGGTAAATCTGATTT 57.387 29.630 18.64 18.64 36.29 2.17
719 720 8.924511 AATGATACGGTAAATCTGATTTGGAT 57.075 30.769 22.47 10.33 33.82 3.41
720 721 8.924511 ATGATACGGTAAATCTGATTTGGATT 57.075 30.769 22.47 9.27 35.25 3.01
721 722 8.153479 TGATACGGTAAATCTGATTTGGATTG 57.847 34.615 22.47 11.62 34.19 2.67
722 723 7.773224 TGATACGGTAAATCTGATTTGGATTGT 59.227 33.333 22.47 15.61 34.19 2.71
723 724 6.194796 ACGGTAAATCTGATTTGGATTGTG 57.805 37.500 22.47 9.66 34.19 3.33
724 725 5.125417 ACGGTAAATCTGATTTGGATTGTGG 59.875 40.000 22.47 7.99 34.19 4.17
725 726 5.356751 CGGTAAATCTGATTTGGATTGTGGA 59.643 40.000 22.47 0.00 34.19 4.02
726 727 6.458751 CGGTAAATCTGATTTGGATTGTGGAG 60.459 42.308 22.47 2.46 34.19 3.86
727 728 6.603201 GGTAAATCTGATTTGGATTGTGGAGA 59.397 38.462 22.47 0.00 34.19 3.71
728 729 7.286316 GGTAAATCTGATTTGGATTGTGGAGAT 59.714 37.037 22.47 0.00 34.19 2.75
729 730 6.956202 AATCTGATTTGGATTGTGGAGATC 57.044 37.500 0.00 0.00 32.90 2.75
730 731 5.705397 TCTGATTTGGATTGTGGAGATCT 57.295 39.130 0.00 0.00 0.00 2.75
731 732 6.070951 TCTGATTTGGATTGTGGAGATCTT 57.929 37.500 0.00 0.00 0.00 2.40
732 733 6.487828 TCTGATTTGGATTGTGGAGATCTTT 58.512 36.000 0.00 0.00 0.00 2.52
733 734 6.950041 TCTGATTTGGATTGTGGAGATCTTTT 59.050 34.615 0.00 0.00 0.00 2.27
734 735 7.452501 TCTGATTTGGATTGTGGAGATCTTTTT 59.547 33.333 0.00 0.00 0.00 1.94
761 762 5.266242 GCGGTTGATTGTTGAGATTGATAC 58.734 41.667 0.00 0.00 0.00 2.24
765 766 6.250819 GTTGATTGTTGAGATTGATACGGTG 58.749 40.000 0.00 0.00 0.00 4.94
816 817 4.189639 GATTAGGCAATCTACCCTACCG 57.810 50.000 0.00 0.00 38.03 4.02
817 818 2.761786 TAGGCAATCTACCCTACCGT 57.238 50.000 0.00 0.00 32.65 4.83
818 819 2.761786 AGGCAATCTACCCTACCGTA 57.238 50.000 0.00 0.00 0.00 4.02
819 820 3.255634 AGGCAATCTACCCTACCGTAT 57.744 47.619 0.00 0.00 0.00 3.06
820 821 3.163467 AGGCAATCTACCCTACCGTATC 58.837 50.000 0.00 0.00 0.00 2.24
821 822 3.163467 GGCAATCTACCCTACCGTATCT 58.837 50.000 0.00 0.00 0.00 1.98
822 823 4.043812 AGGCAATCTACCCTACCGTATCTA 59.956 45.833 0.00 0.00 0.00 1.98
823 824 4.157472 GGCAATCTACCCTACCGTATCTAC 59.843 50.000 0.00 0.00 0.00 2.59
824 825 4.157472 GCAATCTACCCTACCGTATCTACC 59.843 50.000 0.00 0.00 0.00 3.18
825 826 4.582973 ATCTACCCTACCGTATCTACCC 57.417 50.000 0.00 0.00 0.00 3.69
826 827 2.303022 TCTACCCTACCGTATCTACCCG 59.697 54.545 0.00 0.00 0.00 5.28
827 828 1.140312 ACCCTACCGTATCTACCCGA 58.860 55.000 0.00 0.00 0.00 5.14
828 829 1.707427 ACCCTACCGTATCTACCCGAT 59.293 52.381 0.00 0.00 36.11 4.18
829 830 2.290577 ACCCTACCGTATCTACCCGATC 60.291 54.545 0.00 0.00 33.48 3.69
830 831 2.026449 CCCTACCGTATCTACCCGATCT 60.026 54.545 0.00 0.00 33.48 2.75
831 832 3.008330 CCTACCGTATCTACCCGATCTG 58.992 54.545 0.00 0.00 33.48 2.90
832 833 2.945080 ACCGTATCTACCCGATCTGA 57.055 50.000 0.00 0.00 33.48 3.27
833 834 3.436577 ACCGTATCTACCCGATCTGAT 57.563 47.619 0.00 0.00 33.48 2.90
834 835 3.764218 ACCGTATCTACCCGATCTGATT 58.236 45.455 0.00 0.00 33.48 2.57
835 836 4.150359 ACCGTATCTACCCGATCTGATTT 58.850 43.478 0.00 0.00 33.48 2.17
836 837 4.022242 ACCGTATCTACCCGATCTGATTTG 60.022 45.833 0.00 0.00 33.48 2.32
837 838 4.486090 CGTATCTACCCGATCTGATTTGG 58.514 47.826 5.21 5.21 33.48 3.28
838 839 4.217767 CGTATCTACCCGATCTGATTTGGA 59.782 45.833 11.86 0.00 33.48 3.53
839 840 5.105716 CGTATCTACCCGATCTGATTTGGAT 60.106 44.000 11.86 0.00 33.48 3.41
840 841 5.832539 ATCTACCCGATCTGATTTGGATT 57.167 39.130 11.86 2.76 0.00 3.01
841 842 5.630415 TCTACCCGATCTGATTTGGATTT 57.370 39.130 11.86 0.86 0.00 2.17
842 843 6.001449 TCTACCCGATCTGATTTGGATTTT 57.999 37.500 11.86 0.00 0.00 1.82
843 844 6.423182 TCTACCCGATCTGATTTGGATTTTT 58.577 36.000 11.86 0.00 0.00 1.94
844 845 5.329035 ACCCGATCTGATTTGGATTTTTG 57.671 39.130 11.86 0.00 0.00 2.44
845 846 5.016173 ACCCGATCTGATTTGGATTTTTGA 58.984 37.500 11.86 0.00 0.00 2.69
846 847 5.126061 ACCCGATCTGATTTGGATTTTTGAG 59.874 40.000 11.86 0.00 0.00 3.02
847 848 5.357878 CCCGATCTGATTTGGATTTTTGAGA 59.642 40.000 10.44 0.00 0.00 3.27
848 849 6.040166 CCCGATCTGATTTGGATTTTTGAGAT 59.960 38.462 10.44 0.00 0.00 2.75
849 850 6.916387 CCGATCTGATTTGGATTTTTGAGATG 59.084 38.462 4.38 0.00 0.00 2.90
850 851 7.415989 CCGATCTGATTTGGATTTTTGAGATGT 60.416 37.037 4.38 0.00 0.00 3.06
851 852 8.615211 CGATCTGATTTGGATTTTTGAGATGTA 58.385 33.333 0.00 0.00 0.00 2.29
980 985 2.419297 CCTCAAACCATCTTCCTCTCGG 60.419 54.545 0.00 0.00 0.00 4.63
981 986 2.497675 CTCAAACCATCTTCCTCTCGGA 59.502 50.000 0.00 0.00 37.60 4.55
982 987 2.233922 TCAAACCATCTTCCTCTCGGAC 59.766 50.000 0.00 0.00 39.60 4.79
992 1013 4.040461 TCTTCCTCTCGGACAAAGACAAAT 59.960 41.667 0.00 0.00 39.60 2.32
998 1019 6.183360 CCTCTCGGACAAAGACAAATAATCAC 60.183 42.308 0.00 0.00 0.00 3.06
1047 1068 0.327924 TGGCCATCTTGTTCATCGGT 59.672 50.000 0.00 0.00 0.00 4.69
1098 1120 8.627208 AGTATTCTTGCCATTACCTTCATATG 57.373 34.615 0.00 0.00 0.00 1.78
1099 1121 8.220559 AGTATTCTTGCCATTACCTTCATATGT 58.779 33.333 1.90 0.00 0.00 2.29
1100 1122 9.502091 GTATTCTTGCCATTACCTTCATATGTA 57.498 33.333 1.90 0.00 0.00 2.29
1104 1126 9.066892 TCTTGCCATTACCTTCATATGTATTTC 57.933 33.333 1.90 0.00 0.00 2.17
1113 1135 7.472543 ACCTTCATATGTATTTCGAACAAAGC 58.527 34.615 0.00 0.00 0.00 3.51
1120 1142 4.452795 TGTATTTCGAACAAAGCCGAATCA 59.547 37.500 0.00 0.00 43.14 2.57
1156 1183 1.042229 GTGTACCCCCAACCAAAACC 58.958 55.000 0.00 0.00 0.00 3.27
1164 1191 1.691976 CCCAACCAAAACCTTCCCTTC 59.308 52.381 0.00 0.00 0.00 3.46
1297 1328 6.121590 TGGTGATATCAATGAAAGCAAGCTA 58.878 36.000 7.07 0.00 0.00 3.32
1748 1794 7.106890 TGACCTGAATATTTGTGTCCGAATTA 58.893 34.615 8.71 0.00 0.00 1.40
1778 1824 3.823281 TGGACTTCGGAAACACTAACA 57.177 42.857 0.00 0.00 0.00 2.41
1813 1859 1.228094 TTTGCATCTCGCCCACACA 60.228 52.632 0.00 0.00 41.33 3.72
1835 1881 1.153784 GGATCCGCGTCCGTTTGTA 60.154 57.895 4.92 0.00 0.00 2.41
1857 1903 2.480759 GGTGCATGAATCTTGGCATGTC 60.481 50.000 0.00 0.00 42.86 3.06
2054 2130 1.770110 TCTCCCACACCCAAGCTGT 60.770 57.895 0.00 0.00 0.00 4.40
2092 2168 1.233950 CGGTGTACATGGCAACTGCA 61.234 55.000 0.00 0.00 44.36 4.41
2096 2172 2.159627 GTGTACATGGCAACTGCACTAC 59.840 50.000 0.00 0.00 44.36 2.73
2240 2341 1.754226 ACCCGAACATGTTGTTTTGCT 59.246 42.857 17.58 0.00 41.28 3.91
2257 2358 3.165058 TGCTATGTCTCTTTGTAGCGG 57.835 47.619 0.00 0.00 41.78 5.52
2270 2371 0.668401 GTAGCGGTACACGGCAACTT 60.668 55.000 19.43 0.00 43.55 2.66
2294 2395 4.020485 CCTAGTGTTAGTAGGTGGCAACTT 60.020 45.833 11.85 0.00 36.69 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.286772 CCGTGCAAGTAAAACACTGGTC 60.287 50.000 0.00 0.00 37.63 4.02
3 4 1.001815 CCCGTGCAAGTAAAACACTGG 60.002 52.381 0.00 0.00 37.63 4.00
4 5 1.944024 TCCCGTGCAAGTAAAACACTG 59.056 47.619 0.00 0.00 37.63 3.66
6 7 1.333435 CGTCCCGTGCAAGTAAAACAC 60.333 52.381 0.00 0.00 0.00 3.32
7 8 0.938713 CGTCCCGTGCAAGTAAAACA 59.061 50.000 0.00 0.00 0.00 2.83
8 9 0.236449 CCGTCCCGTGCAAGTAAAAC 59.764 55.000 0.00 0.00 0.00 2.43
9 10 0.885596 CCCGTCCCGTGCAAGTAAAA 60.886 55.000 0.00 0.00 0.00 1.52
10 11 1.301874 CCCGTCCCGTGCAAGTAAA 60.302 57.895 0.00 0.00 0.00 2.01
11 12 2.208619 TCCCGTCCCGTGCAAGTAA 61.209 57.895 0.00 0.00 0.00 2.24
12 13 2.601067 TCCCGTCCCGTGCAAGTA 60.601 61.111 0.00 0.00 0.00 2.24
13 14 4.309950 GTCCCGTCCCGTGCAAGT 62.310 66.667 0.00 0.00 0.00 3.16
24 25 2.703675 ATATAGCCGTCCCGTCCCGT 62.704 60.000 0.00 0.00 0.00 5.28
25 26 1.930908 GATATAGCCGTCCCGTCCCG 61.931 65.000 0.00 0.00 0.00 5.14
26 27 1.602327 GGATATAGCCGTCCCGTCCC 61.602 65.000 0.00 0.00 0.00 4.46
27 28 0.896940 TGGATATAGCCGTCCCGTCC 60.897 60.000 1.91 0.00 33.45 4.79
28 29 0.243095 GTGGATATAGCCGTCCCGTC 59.757 60.000 1.91 0.00 33.45 4.79
29 30 1.521450 CGTGGATATAGCCGTCCCGT 61.521 60.000 1.91 0.00 33.45 5.28
30 31 1.211969 CGTGGATATAGCCGTCCCG 59.788 63.158 1.91 0.00 33.45 5.14
31 32 1.183676 ACCGTGGATATAGCCGTCCC 61.184 60.000 1.91 0.00 33.45 4.46
32 33 0.243095 GACCGTGGATATAGCCGTCC 59.757 60.000 1.91 0.00 35.02 4.79
33 34 0.243095 GGACCGTGGATATAGCCGTC 59.757 60.000 1.91 3.90 0.00 4.79
34 35 0.468585 TGGACCGTGGATATAGCCGT 60.469 55.000 1.91 0.00 0.00 5.68
35 36 0.038526 GTGGACCGTGGATATAGCCG 60.039 60.000 1.91 0.00 0.00 5.52
36 37 0.320697 GGTGGACCGTGGATATAGCC 59.679 60.000 0.00 0.00 0.00 3.93
37 38 1.000955 CAGGTGGACCGTGGATATAGC 59.999 57.143 0.00 0.00 42.08 2.97
38 39 1.000955 GCAGGTGGACCGTGGATATAG 59.999 57.143 0.00 0.00 42.08 1.31
39 40 1.045407 GCAGGTGGACCGTGGATATA 58.955 55.000 0.00 0.00 42.08 0.86
40 41 0.980754 TGCAGGTGGACCGTGGATAT 60.981 55.000 0.00 0.00 42.08 1.63
41 42 0.980754 ATGCAGGTGGACCGTGGATA 60.981 55.000 0.00 0.00 42.08 2.59
42 43 2.257409 GATGCAGGTGGACCGTGGAT 62.257 60.000 0.00 0.00 42.08 3.41
43 44 2.927856 ATGCAGGTGGACCGTGGA 60.928 61.111 0.00 0.00 42.08 4.02
44 45 2.436646 GATGCAGGTGGACCGTGG 60.437 66.667 0.00 0.00 42.08 4.94
45 46 0.606401 AAAGATGCAGGTGGACCGTG 60.606 55.000 0.00 0.00 42.08 4.94
46 47 0.606401 CAAAGATGCAGGTGGACCGT 60.606 55.000 0.00 0.00 42.08 4.83
47 48 0.606401 ACAAAGATGCAGGTGGACCG 60.606 55.000 0.00 0.00 42.08 4.79
48 49 0.883833 CACAAAGATGCAGGTGGACC 59.116 55.000 0.00 0.00 0.00 4.46
49 50 1.267806 CACACAAAGATGCAGGTGGAC 59.732 52.381 0.00 0.00 35.62 4.02
50 51 1.608055 CACACAAAGATGCAGGTGGA 58.392 50.000 0.00 0.00 35.62 4.02
51 52 0.038892 GCACACAAAGATGCAGGTGG 60.039 55.000 0.00 0.00 41.65 4.61
52 53 0.956633 AGCACACAAAGATGCAGGTG 59.043 50.000 0.00 0.00 44.59 4.00
53 54 0.956633 CAGCACACAAAGATGCAGGT 59.043 50.000 0.00 0.00 44.59 4.00
54 55 1.241165 TCAGCACACAAAGATGCAGG 58.759 50.000 0.00 0.00 44.59 4.85
55 56 2.551032 TCTTCAGCACACAAAGATGCAG 59.449 45.455 0.00 0.00 44.59 4.41
56 57 2.574450 TCTTCAGCACACAAAGATGCA 58.426 42.857 0.00 0.00 44.59 3.96
57 58 3.004106 AGTTCTTCAGCACACAAAGATGC 59.996 43.478 0.00 0.00 42.39 3.91
58 59 4.274214 TCAGTTCTTCAGCACACAAAGATG 59.726 41.667 0.00 0.00 0.00 2.90
59 60 4.454678 TCAGTTCTTCAGCACACAAAGAT 58.545 39.130 0.00 0.00 0.00 2.40
60 61 3.872696 TCAGTTCTTCAGCACACAAAGA 58.127 40.909 0.00 0.00 0.00 2.52
61 62 4.497006 CCTTCAGTTCTTCAGCACACAAAG 60.497 45.833 0.00 0.00 0.00 2.77
62 63 3.378112 CCTTCAGTTCTTCAGCACACAAA 59.622 43.478 0.00 0.00 0.00 2.83
63 64 2.945008 CCTTCAGTTCTTCAGCACACAA 59.055 45.455 0.00 0.00 0.00 3.33
64 65 2.564771 CCTTCAGTTCTTCAGCACACA 58.435 47.619 0.00 0.00 0.00 3.72
65 66 1.876156 CCCTTCAGTTCTTCAGCACAC 59.124 52.381 0.00 0.00 0.00 3.82
66 67 1.815408 GCCCTTCAGTTCTTCAGCACA 60.815 52.381 0.00 0.00 0.00 4.57
67 68 0.877743 GCCCTTCAGTTCTTCAGCAC 59.122 55.000 0.00 0.00 0.00 4.40
68 69 0.250901 GGCCCTTCAGTTCTTCAGCA 60.251 55.000 0.00 0.00 0.00 4.41
69 70 0.037447 AGGCCCTTCAGTTCTTCAGC 59.963 55.000 0.00 0.00 0.00 4.26
70 71 1.349026 TGAGGCCCTTCAGTTCTTCAG 59.651 52.381 0.00 0.00 0.00 3.02
71 72 1.349026 CTGAGGCCCTTCAGTTCTTCA 59.651 52.381 12.79 0.00 39.76 3.02
72 73 1.339535 CCTGAGGCCCTTCAGTTCTTC 60.340 57.143 18.08 0.00 42.41 2.87
73 74 0.695347 CCTGAGGCCCTTCAGTTCTT 59.305 55.000 18.08 0.00 42.41 2.52
74 75 0.474660 ACCTGAGGCCCTTCAGTTCT 60.475 55.000 18.08 1.06 42.41 3.01
75 76 0.035915 GACCTGAGGCCCTTCAGTTC 60.036 60.000 18.08 11.50 42.41 3.01
76 77 0.768221 TGACCTGAGGCCCTTCAGTT 60.768 55.000 18.08 6.52 42.41 3.16
77 78 1.152030 TGACCTGAGGCCCTTCAGT 60.152 57.895 18.08 8.47 42.41 3.41
78 79 1.601171 CTGACCTGAGGCCCTTCAG 59.399 63.158 13.83 13.83 43.35 3.02
79 80 2.596851 GCTGACCTGAGGCCCTTCA 61.597 63.158 0.00 0.00 0.00 3.02
80 81 2.270527 GCTGACCTGAGGCCCTTC 59.729 66.667 0.00 0.00 0.00 3.46
81 82 3.334054 GGCTGACCTGAGGCCCTT 61.334 66.667 0.00 0.00 39.96 3.95
82 83 4.664267 TGGCTGACCTGAGGCCCT 62.664 66.667 0.00 0.00 44.71 5.19
83 84 4.416738 GTGGCTGACCTGAGGCCC 62.417 72.222 0.00 0.00 44.71 5.80
84 85 4.416738 GGTGGCTGACCTGAGGCC 62.417 72.222 0.00 0.00 42.25 5.19
85 86 3.640407 TGGTGGCTGACCTGAGGC 61.640 66.667 0.00 0.00 46.32 4.70
86 87 2.055689 TTGTGGTGGCTGACCTGAGG 62.056 60.000 0.00 0.00 46.32 3.86
87 88 0.037303 ATTGTGGTGGCTGACCTGAG 59.963 55.000 6.95 0.00 46.32 3.35
88 89 1.357137 TATTGTGGTGGCTGACCTGA 58.643 50.000 6.95 0.00 46.32 3.86
89 90 2.198827 TTATTGTGGTGGCTGACCTG 57.801 50.000 6.95 0.00 46.32 4.00
90 91 2.108250 ACTTTATTGTGGTGGCTGACCT 59.892 45.455 6.95 0.00 46.32 3.85
91 92 2.488153 GACTTTATTGTGGTGGCTGACC 59.512 50.000 0.00 0.00 46.37 4.02
92 93 3.146066 TGACTTTATTGTGGTGGCTGAC 58.854 45.455 0.00 0.00 0.00 3.51
93 94 3.500448 TGACTTTATTGTGGTGGCTGA 57.500 42.857 0.00 0.00 0.00 4.26
94 95 3.820467 TCTTGACTTTATTGTGGTGGCTG 59.180 43.478 0.00 0.00 0.00 4.85
95 96 4.098914 TCTTGACTTTATTGTGGTGGCT 57.901 40.909 0.00 0.00 0.00 4.75
96 97 4.846779 TTCTTGACTTTATTGTGGTGGC 57.153 40.909 0.00 0.00 0.00 5.01
97 98 7.222611 CACTTTTTCTTGACTTTATTGTGGTGG 59.777 37.037 0.00 0.00 0.00 4.61
98 99 7.973388 TCACTTTTTCTTGACTTTATTGTGGTG 59.027 33.333 0.00 0.00 0.00 4.17
99 100 8.062065 TCACTTTTTCTTGACTTTATTGTGGT 57.938 30.769 0.00 0.00 0.00 4.16
100 101 8.925161 TTCACTTTTTCTTGACTTTATTGTGG 57.075 30.769 0.00 0.00 0.00 4.17
101 102 9.787532 TCTTCACTTTTTCTTGACTTTATTGTG 57.212 29.630 0.00 0.00 0.00 3.33
107 108 9.014297 TCTCTTTCTTCACTTTTTCTTGACTTT 57.986 29.630 0.00 0.00 0.00 2.66
108 109 8.567285 TCTCTTTCTTCACTTTTTCTTGACTT 57.433 30.769 0.00 0.00 0.00 3.01
109 110 8.744568 ATCTCTTTCTTCACTTTTTCTTGACT 57.255 30.769 0.00 0.00 0.00 3.41
151 152 9.828039 CTTATATTTAGGAACGAAGGGTACTTT 57.172 33.333 0.00 0.00 36.97 2.66
152 153 8.985922 ACTTATATTTAGGAACGAAGGGTACTT 58.014 33.333 0.00 0.00 40.34 2.24
153 154 8.544687 ACTTATATTTAGGAACGAAGGGTACT 57.455 34.615 0.00 0.00 0.00 2.73
154 155 8.637099 AGACTTATATTTAGGAACGAAGGGTAC 58.363 37.037 0.00 0.00 0.00 3.34
155 156 8.773033 AGACTTATATTTAGGAACGAAGGGTA 57.227 34.615 0.00 0.00 0.00 3.69
156 157 7.672122 AGACTTATATTTAGGAACGAAGGGT 57.328 36.000 0.00 0.00 0.00 4.34
157 158 8.959705 AAAGACTTATATTTAGGAACGAAGGG 57.040 34.615 0.00 0.00 0.00 3.95
174 175 9.635520 CCGTAGTGAAATCTCTAAAAAGACTTA 57.364 33.333 0.00 0.00 0.00 2.24
175 176 8.365647 TCCGTAGTGAAATCTCTAAAAAGACTT 58.634 33.333 0.00 0.00 0.00 3.01
176 177 7.893658 TCCGTAGTGAAATCTCTAAAAAGACT 58.106 34.615 0.00 0.00 0.00 3.24
177 178 7.813627 ACTCCGTAGTGAAATCTCTAAAAAGAC 59.186 37.037 0.00 0.00 33.57 3.01
178 179 7.893658 ACTCCGTAGTGAAATCTCTAAAAAGA 58.106 34.615 0.00 0.00 33.57 2.52
179 180 9.804758 ATACTCCGTAGTGAAATCTCTAAAAAG 57.195 33.333 0.00 0.00 36.36 2.27
184 185 9.363763 CGTATATACTCCGTAGTGAAATCTCTA 57.636 37.037 11.05 0.00 36.36 2.43
185 186 7.333921 CCGTATATACTCCGTAGTGAAATCTCT 59.666 40.741 11.05 0.00 36.36 3.10
186 187 7.332926 TCCGTATATACTCCGTAGTGAAATCTC 59.667 40.741 11.05 0.00 36.36 2.75
187 188 7.164122 TCCGTATATACTCCGTAGTGAAATCT 58.836 38.462 11.05 0.00 36.36 2.40
188 189 7.369803 TCCGTATATACTCCGTAGTGAAATC 57.630 40.000 11.05 0.00 36.36 2.17
189 190 6.128063 GCTCCGTATATACTCCGTAGTGAAAT 60.128 42.308 11.05 0.00 36.36 2.17
190 191 5.180117 GCTCCGTATATACTCCGTAGTGAAA 59.820 44.000 11.05 0.00 36.36 2.69
191 192 4.692625 GCTCCGTATATACTCCGTAGTGAA 59.307 45.833 11.05 0.00 36.36 3.18
192 193 4.248859 GCTCCGTATATACTCCGTAGTGA 58.751 47.826 11.05 0.00 36.36 3.41
193 194 3.999001 TGCTCCGTATATACTCCGTAGTG 59.001 47.826 11.05 0.00 36.36 2.74
194 195 4.277515 TGCTCCGTATATACTCCGTAGT 57.722 45.455 11.05 0.00 39.91 2.73
195 196 5.618056 TTTGCTCCGTATATACTCCGTAG 57.382 43.478 11.05 2.81 0.00 3.51
196 197 6.384224 CATTTTGCTCCGTATATACTCCGTA 58.616 40.000 11.05 0.00 0.00 4.02
197 198 4.924305 TTTTGCTCCGTATATACTCCGT 57.076 40.909 11.05 0.00 0.00 4.69
198 199 4.625742 CCATTTTGCTCCGTATATACTCCG 59.374 45.833 11.05 0.00 0.00 4.63
199 200 5.790593 TCCATTTTGCTCCGTATATACTCC 58.209 41.667 11.05 0.00 0.00 3.85
200 201 7.097192 TCATCCATTTTGCTCCGTATATACTC 58.903 38.462 11.05 0.00 0.00 2.59
201 202 7.004555 TCATCCATTTTGCTCCGTATATACT 57.995 36.000 11.05 0.00 0.00 2.12
202 203 7.667043 TTCATCCATTTTGCTCCGTATATAC 57.333 36.000 2.53 2.53 0.00 1.47
203 204 8.321353 AGATTCATCCATTTTGCTCCGTATATA 58.679 33.333 0.00 0.00 0.00 0.86
204 205 7.170965 AGATTCATCCATTTTGCTCCGTATAT 58.829 34.615 0.00 0.00 0.00 0.86
205 206 6.533730 AGATTCATCCATTTTGCTCCGTATA 58.466 36.000 0.00 0.00 0.00 1.47
206 207 5.380043 AGATTCATCCATTTTGCTCCGTAT 58.620 37.500 0.00 0.00 0.00 3.06
207 208 4.780815 AGATTCATCCATTTTGCTCCGTA 58.219 39.130 0.00 0.00 0.00 4.02
208 209 3.624777 AGATTCATCCATTTTGCTCCGT 58.375 40.909 0.00 0.00 0.00 4.69
209 210 4.576053 TGTAGATTCATCCATTTTGCTCCG 59.424 41.667 0.00 0.00 0.00 4.63
210 211 5.591877 AGTGTAGATTCATCCATTTTGCTCC 59.408 40.000 0.00 0.00 0.00 4.70
211 212 6.541641 AGAGTGTAGATTCATCCATTTTGCTC 59.458 38.462 0.00 0.00 0.00 4.26
212 213 6.421485 AGAGTGTAGATTCATCCATTTTGCT 58.579 36.000 0.00 0.00 0.00 3.91
213 214 6.690194 AGAGTGTAGATTCATCCATTTTGC 57.310 37.500 0.00 0.00 0.00 3.68
251 252 3.138839 TGGAGGGAGTACATACGGATGTA 59.861 47.826 16.71 16.71 44.77 2.29
253 254 2.594131 TGGAGGGAGTACATACGGATG 58.406 52.381 5.94 5.94 39.16 3.51
254 255 3.432378 GATGGAGGGAGTACATACGGAT 58.568 50.000 0.00 0.00 0.00 4.18
255 256 2.490351 GGATGGAGGGAGTACATACGGA 60.490 54.545 0.00 0.00 0.00 4.69
256 257 1.893801 GGATGGAGGGAGTACATACGG 59.106 57.143 0.00 0.00 0.00 4.02
257 258 1.893801 GGGATGGAGGGAGTACATACG 59.106 57.143 0.00 0.00 0.00 3.06
258 259 2.972348 TGGGATGGAGGGAGTACATAC 58.028 52.381 0.00 0.00 0.00 2.39
259 260 3.717507 TTGGGATGGAGGGAGTACATA 57.282 47.619 0.00 0.00 0.00 2.29
260 261 2.587060 TTGGGATGGAGGGAGTACAT 57.413 50.000 0.00 0.00 0.00 2.29
261 262 2.352561 TTTGGGATGGAGGGAGTACA 57.647 50.000 0.00 0.00 0.00 2.90
262 263 3.953542 ATTTTGGGATGGAGGGAGTAC 57.046 47.619 0.00 0.00 0.00 2.73
263 264 6.068498 ACAATAATTTTGGGATGGAGGGAGTA 60.068 38.462 0.00 0.00 0.00 2.59
264 265 5.211201 CAATAATTTTGGGATGGAGGGAGT 58.789 41.667 0.00 0.00 0.00 3.85
265 266 5.211201 ACAATAATTTTGGGATGGAGGGAG 58.789 41.667 0.00 0.00 0.00 4.30
266 267 5.043432 AGACAATAATTTTGGGATGGAGGGA 60.043 40.000 0.00 0.00 0.00 4.20
267 268 5.211201 AGACAATAATTTTGGGATGGAGGG 58.789 41.667 0.00 0.00 0.00 4.30
268 269 6.796785 AAGACAATAATTTTGGGATGGAGG 57.203 37.500 0.00 0.00 0.00 4.30
294 295 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
295 296 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
296 297 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
297 298 8.002984 TGACTTGATACATCCGTATTTAGACA 57.997 34.615 0.00 0.00 38.48 3.41
298 299 8.916654 CATGACTTGATACATCCGTATTTAGAC 58.083 37.037 0.00 0.00 38.48 2.59
299 300 8.638873 ACATGACTTGATACATCCGTATTTAGA 58.361 33.333 0.00 0.00 38.48 2.10
300 301 8.818141 ACATGACTTGATACATCCGTATTTAG 57.182 34.615 0.00 0.00 38.48 1.85
301 302 9.607988 AAACATGACTTGATACATCCGTATTTA 57.392 29.630 0.00 0.00 38.48 1.40
302 303 8.506168 AAACATGACTTGATACATCCGTATTT 57.494 30.769 0.00 0.00 38.48 1.40
303 304 8.506168 AAAACATGACTTGATACATCCGTATT 57.494 30.769 0.00 0.00 38.48 1.89
304 305 9.261180 CTAAAACATGACTTGATACATCCGTAT 57.739 33.333 0.00 0.00 41.16 3.06
305 306 8.255206 ACTAAAACATGACTTGATACATCCGTA 58.745 33.333 0.00 0.00 0.00 4.02
306 307 7.103641 ACTAAAACATGACTTGATACATCCGT 58.896 34.615 0.00 0.00 0.00 4.69
307 308 7.539712 ACTAAAACATGACTTGATACATCCG 57.460 36.000 0.00 0.00 0.00 4.18
351 352 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
352 353 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
353 354 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
354 355 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
355 356 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
356 357 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
357 358 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
358 359 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
359 360 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
360 361 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
361 362 3.827722 TCCGTCCCAAAATTCTTGTCTT 58.172 40.909 0.00 0.00 0.00 3.01
362 363 3.502123 TCCGTCCCAAAATTCTTGTCT 57.498 42.857 0.00 0.00 0.00 3.41
363 364 3.119495 CCATCCGTCCCAAAATTCTTGTC 60.119 47.826 0.00 0.00 0.00 3.18
364 365 2.825532 CCATCCGTCCCAAAATTCTTGT 59.174 45.455 0.00 0.00 0.00 3.16
365 366 3.088532 TCCATCCGTCCCAAAATTCTTG 58.911 45.455 0.00 0.00 0.00 3.02
366 367 3.245264 ACTCCATCCGTCCCAAAATTCTT 60.245 43.478 0.00 0.00 0.00 2.52
367 368 2.308866 ACTCCATCCGTCCCAAAATTCT 59.691 45.455 0.00 0.00 0.00 2.40
368 369 2.723273 ACTCCATCCGTCCCAAAATTC 58.277 47.619 0.00 0.00 0.00 2.17
369 370 2.899303 ACTCCATCCGTCCCAAAATT 57.101 45.000 0.00 0.00 0.00 1.82
370 371 2.844348 ACTACTCCATCCGTCCCAAAAT 59.156 45.455 0.00 0.00 0.00 1.82
371 372 2.262637 ACTACTCCATCCGTCCCAAAA 58.737 47.619 0.00 0.00 0.00 2.44
372 373 1.946984 ACTACTCCATCCGTCCCAAA 58.053 50.000 0.00 0.00 0.00 3.28
373 374 1.946984 AACTACTCCATCCGTCCCAA 58.053 50.000 0.00 0.00 0.00 4.12
374 375 1.553248 CAAACTACTCCATCCGTCCCA 59.447 52.381 0.00 0.00 0.00 4.37
375 376 1.553704 ACAAACTACTCCATCCGTCCC 59.446 52.381 0.00 0.00 0.00 4.46
376 377 4.667519 ATACAAACTACTCCATCCGTCC 57.332 45.455 0.00 0.00 0.00 4.79
377 378 8.483307 TTTTAATACAAACTACTCCATCCGTC 57.517 34.615 0.00 0.00 0.00 4.79
378 379 9.106070 GATTTTAATACAAACTACTCCATCCGT 57.894 33.333 0.00 0.00 0.00 4.69
379 380 8.557029 GGATTTTAATACAAACTACTCCATCCG 58.443 37.037 0.00 0.00 0.00 4.18
380 381 9.628500 AGGATTTTAATACAAACTACTCCATCC 57.372 33.333 0.00 0.00 0.00 3.51
407 408 9.780186 CCTCCGTTCCTAAATATAAATCTTTCT 57.220 33.333 0.00 0.00 0.00 2.52
408 409 9.000486 CCCTCCGTTCCTAAATATAAATCTTTC 58.000 37.037 0.00 0.00 0.00 2.62
409 410 8.720537 TCCCTCCGTTCCTAAATATAAATCTTT 58.279 33.333 0.00 0.00 0.00 2.52
410 411 8.271398 TCCCTCCGTTCCTAAATATAAATCTT 57.729 34.615 0.00 0.00 0.00 2.40
411 412 7.513091 ACTCCCTCCGTTCCTAAATATAAATCT 59.487 37.037 0.00 0.00 0.00 2.40
412 413 7.677892 ACTCCCTCCGTTCCTAAATATAAATC 58.322 38.462 0.00 0.00 0.00 2.17
413 414 7.628501 ACTCCCTCCGTTCCTAAATATAAAT 57.371 36.000 0.00 0.00 0.00 1.40
414 415 7.786464 ACTACTCCCTCCGTTCCTAAATATAAA 59.214 37.037 0.00 0.00 0.00 1.40
415 416 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
416 417 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
417 418 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
418 419 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
419 420 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
420 421 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
421 422 3.525199 ACTACTACTCCCTCCGTTCCTAA 59.475 47.826 0.00 0.00 0.00 2.69
422 423 3.118112 CACTACTACTCCCTCCGTTCCTA 60.118 52.174 0.00 0.00 0.00 2.94
423 424 1.921748 ACTACTACTCCCTCCGTTCCT 59.078 52.381 0.00 0.00 0.00 3.36
424 425 2.022934 CACTACTACTCCCTCCGTTCC 58.977 57.143 0.00 0.00 0.00 3.62
425 426 2.720915 ACACTACTACTCCCTCCGTTC 58.279 52.381 0.00 0.00 0.00 3.95
426 427 2.895242 ACACTACTACTCCCTCCGTT 57.105 50.000 0.00 0.00 0.00 4.44
427 428 4.516652 ATTACACTACTACTCCCTCCGT 57.483 45.455 0.00 0.00 0.00 4.69
428 429 4.455190 GCTATTACACTACTACTCCCTCCG 59.545 50.000 0.00 0.00 0.00 4.63
429 430 4.766373 GGCTATTACACTACTACTCCCTCC 59.234 50.000 0.00 0.00 0.00 4.30
430 431 5.383476 TGGCTATTACACTACTACTCCCTC 58.617 45.833 0.00 0.00 0.00 4.30
431 432 5.399052 TGGCTATTACACTACTACTCCCT 57.601 43.478 0.00 0.00 0.00 4.20
432 433 5.221402 GGTTGGCTATTACACTACTACTCCC 60.221 48.000 0.00 0.00 0.00 4.30
433 434 5.597594 AGGTTGGCTATTACACTACTACTCC 59.402 44.000 0.00 0.00 0.00 3.85
434 435 6.712179 AGGTTGGCTATTACACTACTACTC 57.288 41.667 0.00 0.00 0.00 2.59
435 436 8.779096 ATAAGGTTGGCTATTACACTACTACT 57.221 34.615 0.00 0.00 0.00 2.57
437 438 8.800332 GCTATAAGGTTGGCTATTACACTACTA 58.200 37.037 0.00 0.00 0.00 1.82
438 439 7.256225 GGCTATAAGGTTGGCTATTACACTACT 60.256 40.741 0.00 0.00 0.00 2.57
439 440 6.872547 GGCTATAAGGTTGGCTATTACACTAC 59.127 42.308 0.00 0.00 0.00 2.73
440 441 6.013984 GGGCTATAAGGTTGGCTATTACACTA 60.014 42.308 0.00 0.00 0.00 2.74
441 442 5.221864 GGGCTATAAGGTTGGCTATTACACT 60.222 44.000 0.00 0.00 0.00 3.55
442 443 5.001874 GGGCTATAAGGTTGGCTATTACAC 58.998 45.833 0.00 0.00 0.00 2.90
443 444 4.661240 TGGGCTATAAGGTTGGCTATTACA 59.339 41.667 0.00 0.00 0.00 2.41
444 445 5.001874 GTGGGCTATAAGGTTGGCTATTAC 58.998 45.833 0.00 0.00 0.00 1.89
445 446 4.661240 TGTGGGCTATAAGGTTGGCTATTA 59.339 41.667 0.00 0.00 0.00 0.98
446 447 3.461831 TGTGGGCTATAAGGTTGGCTATT 59.538 43.478 0.00 0.00 0.00 1.73
447 448 3.053077 TGTGGGCTATAAGGTTGGCTAT 58.947 45.455 0.00 0.00 0.00 2.97
448 449 2.483547 TGTGGGCTATAAGGTTGGCTA 58.516 47.619 0.00 0.00 0.00 3.93
449 450 1.295020 TGTGGGCTATAAGGTTGGCT 58.705 50.000 0.00 0.00 0.00 4.75
450 451 2.364972 ATGTGGGCTATAAGGTTGGC 57.635 50.000 0.00 0.00 0.00 4.52
451 452 5.833131 ACAATAATGTGGGCTATAAGGTTGG 59.167 40.000 0.00 0.00 38.69 3.77
452 453 6.959639 ACAATAATGTGGGCTATAAGGTTG 57.040 37.500 0.00 0.00 38.69 3.77
453 454 7.669722 CCATACAATAATGTGGGCTATAAGGTT 59.330 37.037 0.00 0.00 40.84 3.50
454 455 7.175104 CCATACAATAATGTGGGCTATAAGGT 58.825 38.462 0.00 0.00 40.84 3.50
455 456 6.603201 CCCATACAATAATGTGGGCTATAAGG 59.397 42.308 0.00 0.00 40.84 2.69
456 457 7.175104 ACCCATACAATAATGTGGGCTATAAG 58.825 38.462 9.12 0.00 43.47 1.73
457 458 7.097623 ACCCATACAATAATGTGGGCTATAA 57.902 36.000 9.12 0.00 43.47 0.98
458 459 6.712114 ACCCATACAATAATGTGGGCTATA 57.288 37.500 9.12 0.00 43.47 1.31
459 460 5.599048 ACCCATACAATAATGTGGGCTAT 57.401 39.130 9.12 0.00 43.47 2.97
460 461 6.503924 AGATACCCATACAATAATGTGGGCTA 59.496 38.462 9.12 2.48 43.47 3.93
461 462 3.971468 ACCCATACAATAATGTGGGCT 57.029 42.857 9.12 0.00 43.47 5.19
462 463 5.570320 AGATACCCATACAATAATGTGGGC 58.430 41.667 9.12 0.00 43.47 5.36
472 473 9.729550 AGCCATAATCTATAGATACCCATACAA 57.270 33.333 15.64 0.00 33.73 2.41
488 489 9.570468 CTGGCATATCATTTATAGCCATAATCT 57.430 33.333 4.25 0.00 40.49 2.40
489 490 9.347240 ACTGGCATATCATTTATAGCCATAATC 57.653 33.333 4.25 0.00 40.49 1.75
490 491 9.705103 AACTGGCATATCATTTATAGCCATAAT 57.295 29.630 4.25 0.00 40.49 1.28
491 492 9.177608 GAACTGGCATATCATTTATAGCCATAA 57.822 33.333 4.25 0.00 40.49 1.90
492 493 7.775093 GGAACTGGCATATCATTTATAGCCATA 59.225 37.037 4.25 0.00 40.49 2.74
493 494 6.604795 GGAACTGGCATATCATTTATAGCCAT 59.395 38.462 4.25 0.00 40.49 4.40
494 495 5.945784 GGAACTGGCATATCATTTATAGCCA 59.054 40.000 0.00 0.00 39.75 4.75
495 496 6.183347 AGGAACTGGCATATCATTTATAGCC 58.817 40.000 0.00 0.00 37.18 3.93
496 497 7.693969 AAGGAACTGGCATATCATTTATAGC 57.306 36.000 0.00 0.00 40.86 2.97
499 500 9.401058 GCTATAAGGAACTGGCATATCATTTAT 57.599 33.333 5.16 8.44 40.86 1.40
500 501 7.829211 GGCTATAAGGAACTGGCATATCATTTA 59.171 37.037 5.16 2.99 40.86 1.40
501 502 6.660949 GGCTATAAGGAACTGGCATATCATTT 59.339 38.462 5.16 1.22 40.86 2.32
502 503 6.183347 GGCTATAAGGAACTGGCATATCATT 58.817 40.000 5.19 5.19 40.86 2.57
503 504 5.251468 TGGCTATAAGGAACTGGCATATCAT 59.749 40.000 0.00 0.00 40.86 2.45
504 505 4.597075 TGGCTATAAGGAACTGGCATATCA 59.403 41.667 0.00 0.00 40.86 2.15
505 506 5.165961 TGGCTATAAGGAACTGGCATATC 57.834 43.478 0.00 0.00 40.86 1.63
506 507 5.251468 TGATGGCTATAAGGAACTGGCATAT 59.749 40.000 0.00 0.00 42.29 1.78
507 508 4.597075 TGATGGCTATAAGGAACTGGCATA 59.403 41.667 0.00 0.00 42.29 3.14
508 509 3.395607 TGATGGCTATAAGGAACTGGCAT 59.604 43.478 0.00 0.00 44.24 4.40
509 510 2.777114 TGATGGCTATAAGGAACTGGCA 59.223 45.455 0.00 0.00 40.86 4.92
510 511 3.181450 ACTGATGGCTATAAGGAACTGGC 60.181 47.826 0.00 0.00 40.86 4.85
511 512 4.696479 ACTGATGGCTATAAGGAACTGG 57.304 45.455 0.00 0.00 40.86 4.00
512 513 4.818546 CCAACTGATGGCTATAAGGAACTG 59.181 45.833 0.00 0.00 43.80 3.16
513 514 5.041191 CCAACTGATGGCTATAAGGAACT 57.959 43.478 0.00 0.00 43.80 3.01
527 528 8.960591 GCATGGTTAATAATATAGCCAACTGAT 58.039 33.333 0.00 0.00 39.25 2.90
528 529 8.163408 AGCATGGTTAATAATATAGCCAACTGA 58.837 33.333 0.00 0.00 39.25 3.41
529 530 8.340618 AGCATGGTTAATAATATAGCCAACTG 57.659 34.615 0.00 0.00 39.25 3.16
530 531 8.386264 AGAGCATGGTTAATAATATAGCCAACT 58.614 33.333 0.00 0.00 39.25 3.16
531 532 8.567285 AGAGCATGGTTAATAATATAGCCAAC 57.433 34.615 0.00 0.00 39.25 3.77
533 534 9.890629 CTAAGAGCATGGTTAATAATATAGCCA 57.109 33.333 0.00 0.00 39.96 4.75
534 535 9.331282 CCTAAGAGCATGGTTAATAATATAGCC 57.669 37.037 0.00 0.00 0.00 3.93
535 536 8.831550 GCCTAAGAGCATGGTTAATAATATAGC 58.168 37.037 0.00 0.00 0.00 2.97
536 537 9.890629 TGCCTAAGAGCATGGTTAATAATATAG 57.109 33.333 0.00 0.00 38.00 1.31
538 539 9.759473 ATTGCCTAAGAGCATGGTTAATAATAT 57.241 29.630 0.00 0.00 43.64 1.28
539 540 9.231297 GATTGCCTAAGAGCATGGTTAATAATA 57.769 33.333 0.00 0.00 43.64 0.98
540 541 7.946776 AGATTGCCTAAGAGCATGGTTAATAAT 59.053 33.333 0.00 0.00 43.64 1.28
541 542 7.290061 AGATTGCCTAAGAGCATGGTTAATAA 58.710 34.615 0.00 0.00 43.64 1.40
542 543 6.841601 AGATTGCCTAAGAGCATGGTTAATA 58.158 36.000 0.00 0.00 43.64 0.98
543 544 5.699143 AGATTGCCTAAGAGCATGGTTAAT 58.301 37.500 0.00 0.00 43.64 1.40
544 545 5.116084 AGATTGCCTAAGAGCATGGTTAA 57.884 39.130 0.00 0.00 43.64 2.01
545 546 4.778213 AGATTGCCTAAGAGCATGGTTA 57.222 40.909 0.00 0.00 43.64 2.85
546 547 3.659183 AGATTGCCTAAGAGCATGGTT 57.341 42.857 0.00 0.00 43.64 3.67
547 548 3.659183 AAGATTGCCTAAGAGCATGGT 57.341 42.857 0.00 0.00 43.64 3.55
548 549 3.817647 GGTAAGATTGCCTAAGAGCATGG 59.182 47.826 0.00 0.00 43.64 3.66
549 550 4.712476 AGGTAAGATTGCCTAAGAGCATG 58.288 43.478 0.00 0.00 41.76 4.06
550 551 5.379706 AAGGTAAGATTGCCTAAGAGCAT 57.620 39.130 2.43 0.00 42.81 3.79
551 552 4.844349 AAGGTAAGATTGCCTAAGAGCA 57.156 40.909 2.43 0.00 42.81 4.26
552 553 5.057819 GGTAAGGTAAGATTGCCTAAGAGC 58.942 45.833 2.43 0.00 42.81 4.09
553 554 5.163437 ACGGTAAGGTAAGATTGCCTAAGAG 60.163 44.000 2.43 0.00 42.81 2.85
554 555 4.713321 ACGGTAAGGTAAGATTGCCTAAGA 59.287 41.667 2.43 0.00 42.81 2.10
555 556 5.019785 ACGGTAAGGTAAGATTGCCTAAG 57.980 43.478 2.43 0.00 42.81 2.18
556 557 6.324512 TGATACGGTAAGGTAAGATTGCCTAA 59.675 38.462 2.43 0.00 42.81 2.69
557 558 5.834742 TGATACGGTAAGGTAAGATTGCCTA 59.165 40.000 2.43 0.00 42.81 3.93
558 559 4.652421 TGATACGGTAAGGTAAGATTGCCT 59.348 41.667 0.00 0.00 45.74 4.75
559 560 4.952460 TGATACGGTAAGGTAAGATTGCC 58.048 43.478 0.00 0.00 0.00 4.52
560 561 5.235831 GGTTGATACGGTAAGGTAAGATTGC 59.764 44.000 0.00 0.00 0.00 3.56
561 562 5.756833 GGGTTGATACGGTAAGGTAAGATTG 59.243 44.000 0.00 0.00 0.00 2.67
571 572 3.289836 TCAGATCGGGTTGATACGGTAA 58.710 45.455 0.00 0.00 37.47 2.85
574 575 3.386768 AATCAGATCGGGTTGATACGG 57.613 47.619 0.00 0.00 37.47 4.02
647 648 3.705051 TGAGACGGTAGGGTAAGATTGT 58.295 45.455 0.00 0.00 0.00 2.71
677 678 6.847792 CGTATCATTCTCAACAATCCAAATCG 59.152 38.462 0.00 0.00 0.00 3.34
688 689 8.594881 ATCAGATTTACCGTATCATTCTCAAC 57.405 34.615 0.00 0.00 0.00 3.18
694 695 8.924511 ATCCAAATCAGATTTACCGTATCATT 57.075 30.769 8.12 0.00 0.00 2.57
697 698 8.070171 CACAATCCAAATCAGATTTACCGTATC 58.930 37.037 8.12 0.00 31.56 2.24
732 733 3.065510 TCTCAACAATCAACCGCGAAAAA 59.934 39.130 8.23 0.00 0.00 1.94
733 734 2.614520 TCTCAACAATCAACCGCGAAAA 59.385 40.909 8.23 0.00 0.00 2.29
734 735 2.214347 TCTCAACAATCAACCGCGAAA 58.786 42.857 8.23 0.00 0.00 3.46
735 736 1.872388 TCTCAACAATCAACCGCGAA 58.128 45.000 8.23 0.00 0.00 4.70
736 737 2.093306 ATCTCAACAATCAACCGCGA 57.907 45.000 8.23 0.00 0.00 5.87
737 738 2.159430 TCAATCTCAACAATCAACCGCG 59.841 45.455 0.00 0.00 0.00 6.46
738 739 3.829886 TCAATCTCAACAATCAACCGC 57.170 42.857 0.00 0.00 0.00 5.68
739 740 5.492854 CGTATCAATCTCAACAATCAACCG 58.507 41.667 0.00 0.00 0.00 4.44
740 741 5.354234 ACCGTATCAATCTCAACAATCAACC 59.646 40.000 0.00 0.00 0.00 3.77
741 742 6.092122 TCACCGTATCAATCTCAACAATCAAC 59.908 38.462 0.00 0.00 0.00 3.18
742 743 6.169800 TCACCGTATCAATCTCAACAATCAA 58.830 36.000 0.00 0.00 0.00 2.57
743 744 5.729510 TCACCGTATCAATCTCAACAATCA 58.270 37.500 0.00 0.00 0.00 2.57
795 796 3.577415 ACGGTAGGGTAGATTGCCTAATC 59.423 47.826 0.00 0.00 42.44 1.75
796 797 3.584294 ACGGTAGGGTAGATTGCCTAAT 58.416 45.455 0.00 0.00 0.00 1.73
797 798 3.036452 ACGGTAGGGTAGATTGCCTAA 57.964 47.619 0.00 0.00 0.00 2.69
798 799 2.761786 ACGGTAGGGTAGATTGCCTA 57.238 50.000 0.00 0.00 0.00 3.93
799 800 2.761786 TACGGTAGGGTAGATTGCCT 57.238 50.000 0.00 0.00 0.00 4.75
800 801 3.163467 AGATACGGTAGGGTAGATTGCC 58.837 50.000 0.00 0.00 0.00 4.52
801 802 4.157472 GGTAGATACGGTAGGGTAGATTGC 59.843 50.000 0.00 0.00 0.00 3.56
802 803 4.704057 GGGTAGATACGGTAGGGTAGATTG 59.296 50.000 0.00 0.00 0.00 2.67
803 804 4.566488 CGGGTAGATACGGTAGGGTAGATT 60.566 50.000 0.00 0.00 0.00 2.40
804 805 3.054802 CGGGTAGATACGGTAGGGTAGAT 60.055 52.174 0.00 0.00 0.00 1.98
805 806 2.303022 CGGGTAGATACGGTAGGGTAGA 59.697 54.545 0.00 0.00 0.00 2.59
806 807 2.303022 TCGGGTAGATACGGTAGGGTAG 59.697 54.545 0.00 0.00 0.00 3.18
807 808 2.334977 TCGGGTAGATACGGTAGGGTA 58.665 52.381 0.00 0.00 0.00 3.69
808 809 1.140312 TCGGGTAGATACGGTAGGGT 58.860 55.000 0.00 0.00 0.00 4.34
809 810 2.026449 AGATCGGGTAGATACGGTAGGG 60.026 54.545 0.00 0.00 40.26 3.53
810 811 3.008330 CAGATCGGGTAGATACGGTAGG 58.992 54.545 0.00 0.00 40.26 3.18
811 812 3.935315 TCAGATCGGGTAGATACGGTAG 58.065 50.000 0.00 0.00 40.26 3.18
812 813 4.564782 ATCAGATCGGGTAGATACGGTA 57.435 45.455 0.00 0.00 40.26 4.02
813 814 2.945080 TCAGATCGGGTAGATACGGT 57.055 50.000 0.00 0.00 40.26 4.83
814 815 4.486090 CAAATCAGATCGGGTAGATACGG 58.514 47.826 0.00 0.00 40.26 4.02
815 816 4.217767 TCCAAATCAGATCGGGTAGATACG 59.782 45.833 0.00 0.00 40.26 3.06
816 817 5.723672 TCCAAATCAGATCGGGTAGATAC 57.276 43.478 0.00 0.00 40.26 2.24
817 818 6.935240 AATCCAAATCAGATCGGGTAGATA 57.065 37.500 0.00 0.00 40.26 1.98
818 819 5.832539 AATCCAAATCAGATCGGGTAGAT 57.167 39.130 0.00 0.00 43.51 1.98
819 820 5.630415 AAATCCAAATCAGATCGGGTAGA 57.370 39.130 0.00 0.00 0.00 2.59
820 821 6.318648 TCAAAAATCCAAATCAGATCGGGTAG 59.681 38.462 0.00 0.00 0.00 3.18
821 822 6.184068 TCAAAAATCCAAATCAGATCGGGTA 58.816 36.000 0.00 0.00 0.00 3.69
822 823 5.016173 TCAAAAATCCAAATCAGATCGGGT 58.984 37.500 0.00 0.00 0.00 5.28
823 824 5.357878 TCTCAAAAATCCAAATCAGATCGGG 59.642 40.000 0.00 0.00 0.00 5.14
824 825 6.441093 TCTCAAAAATCCAAATCAGATCGG 57.559 37.500 0.00 0.00 0.00 4.18
825 826 7.478322 ACATCTCAAAAATCCAAATCAGATCG 58.522 34.615 0.00 0.00 0.00 3.69
855 856 7.817962 GCCTAATCACGTATACAAGGTATCATT 59.182 37.037 3.32 0.00 0.00 2.57
856 857 7.039293 TGCCTAATCACGTATACAAGGTATCAT 60.039 37.037 3.32 0.00 0.00 2.45
857 858 6.265876 TGCCTAATCACGTATACAAGGTATCA 59.734 38.462 3.32 0.00 0.00 2.15
858 859 6.684686 TGCCTAATCACGTATACAAGGTATC 58.315 40.000 3.32 0.00 0.00 2.24
992 1013 4.119862 GCGGCTCTTTGTCATAGTGATTA 58.880 43.478 0.00 0.00 0.00 1.75
998 1019 1.590238 CGAAGCGGCTCTTTGTCATAG 59.410 52.381 1.45 0.00 34.56 2.23
1098 1120 4.965062 TGATTCGGCTTTGTTCGAAATAC 58.035 39.130 0.00 0.00 46.25 1.89
1099 1121 5.811399 ATGATTCGGCTTTGTTCGAAATA 57.189 34.783 0.00 0.00 46.25 1.40
1100 1122 4.701956 ATGATTCGGCTTTGTTCGAAAT 57.298 36.364 0.00 0.00 46.25 2.17
1101 1123 4.497473 AATGATTCGGCTTTGTTCGAAA 57.503 36.364 0.00 0.00 46.25 3.46
1104 1126 4.095610 GGTAAATGATTCGGCTTTGTTCG 58.904 43.478 0.00 0.00 0.00 3.95
1113 1135 7.485913 CACTGATTGAAAAGGTAAATGATTCGG 59.514 37.037 0.00 0.00 0.00 4.30
1120 1142 6.436218 GGGGTACACTGATTGAAAAGGTAAAT 59.564 38.462 0.00 0.00 0.00 1.40
1156 1183 5.467035 TGCTGTTTTAATTGGAAGGGAAG 57.533 39.130 0.00 0.00 0.00 3.46
1164 1191 5.466058 TGCATCAGTTTGCTGTTTTAATTGG 59.534 36.000 0.00 0.00 43.18 3.16
1191 1218 7.823665 ACCTATTGCATGCATATTTGAGTATG 58.176 34.615 23.37 0.41 35.61 2.39
1297 1328 5.828299 TTCGGAGACAAAACTTCACATTT 57.172 34.783 0.00 0.00 34.32 2.32
1625 1661 5.016173 TGGGTAGAACCATCCAAGAAAATG 58.984 41.667 0.00 0.00 41.02 2.32
1748 1794 7.610305 AGTGTTTCCGAAGTCCAATTGTAATAT 59.390 33.333 4.43 0.00 0.00 1.28
1835 1881 1.754803 CATGCCAAGATTCATGCACCT 59.245 47.619 0.00 0.00 36.41 4.00
1857 1903 1.374252 GTCCTACGTGGCACCACAG 60.374 63.158 19.38 13.77 46.47 3.66
1959 2031 0.107410 TGAAAACTGACGTGTGGGCT 60.107 50.000 0.00 0.00 0.00 5.19
2054 2130 0.597118 GCAAAACGCATGGCAACTGA 60.597 50.000 0.00 0.00 41.79 3.41
2074 2150 0.240945 GTGCAGTTGCCATGTACACC 59.759 55.000 0.00 0.00 41.18 4.16
2104 2180 5.990120 AAAGAAAGTTGCCATCTGCTTAT 57.010 34.783 0.00 0.00 42.00 1.73
2134 2217 2.064434 TGGCAACTGACATGTTTGGA 57.936 45.000 0.00 0.00 37.61 3.53
2240 2341 4.437794 CGTGTACCGCTACAAAGAGACATA 60.438 45.833 0.00 0.00 34.53 2.29
2257 2358 2.288640 ACACTAGGAAGTTGCCGTGTAC 60.289 50.000 15.30 0.00 32.86 2.90
2270 2371 3.461378 TGCCACCTACTAACACTAGGA 57.539 47.619 0.00 0.00 35.23 2.94
2294 2395 6.267471 AGTTGCCATGATTTGAAAACCTTAGA 59.733 34.615 0.00 0.00 0.00 2.10
2349 2450 4.644498 GGTTGCCACCTACTAACACTAAA 58.356 43.478 0.00 0.00 40.44 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.