Multiple sequence alignment - TraesCS5D01G464600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G464600 chr5D 100.000 3424 0 0 1 3424 507770085 507766662 0.000000e+00 6324.0
1 TraesCS5D01G464600 chr5D 78.692 1422 222 46 1019 2402 507573141 507571763 0.000000e+00 872.0
2 TraesCS5D01G464600 chr5D 80.715 923 139 27 1513 2409 507617961 507617052 0.000000e+00 682.0
3 TraesCS5D01G464600 chr5D 89.005 382 38 3 1044 1422 507618673 507618293 1.440000e-128 470.0
4 TraesCS5D01G464600 chr5D 94.512 164 9 0 112 275 398757241 398757404 1.580000e-63 254.0
5 TraesCS5D01G464600 chr5D 92.814 167 11 1 108 274 277619926 277619761 1.230000e-59 241.0
6 TraesCS5D01G464600 chr5D 88.514 148 14 3 2540 2684 341197796 341197649 3.510000e-40 176.0
7 TraesCS5D01G464600 chr5D 88.235 68 6 2 3074 3141 344696965 344697030 2.830000e-11 80.5
8 TraesCS5D01G464600 chr5D 80.208 96 16 3 2049 2142 366780894 366780800 6.130000e-08 69.4
9 TraesCS5D01G464600 chr5B 93.214 1901 92 14 575 2457 638304983 638303102 0.000000e+00 2761.0
10 TraesCS5D01G464600 chr5B 84.536 776 74 32 2679 3424 638302855 638302096 0.000000e+00 726.0
11 TraesCS5D01G464600 chr5B 76.577 222 35 9 3212 3420 470182083 470182300 4.670000e-19 106.0
12 TraesCS5D01G464600 chr5B 83.000 100 14 2 3328 3424 516456895 516456796 1.690000e-13 87.9
13 TraesCS5D01G464600 chr5A 92.263 1913 104 16 558 2457 635381853 635379972 0.000000e+00 2673.0
14 TraesCS5D01G464600 chr5A 92.286 1063 69 2 1013 2062 635337744 635336682 0.000000e+00 1496.0
15 TraesCS5D01G464600 chr5A 80.270 963 149 27 1478 2413 635291502 635290554 0.000000e+00 688.0
16 TraesCS5D01G464600 chr5A 90.176 397 39 0 1019 1415 635292523 635292127 5.070000e-143 518.0
17 TraesCS5D01G464600 chr5A 94.932 296 15 0 2151 2446 635336681 635336386 6.690000e-127 464.0
18 TraesCS5D01G464600 chr5A 84.861 469 37 14 2817 3256 635336192 635335729 3.140000e-120 442.0
19 TraesCS5D01G464600 chr5A 88.462 338 39 0 1019 1356 635294829 635294492 3.180000e-110 409.0
20 TraesCS5D01G464600 chr5A 80.072 552 69 25 2825 3342 635378669 635378125 4.170000e-99 372.0
21 TraesCS5D01G464600 chr5A 87.019 208 20 3 271 471 635382464 635382257 9.560000e-56 228.0
22 TraesCS5D01G464600 chr5A 77.679 224 34 10 3212 3423 705379354 705379135 4.640000e-24 122.0
23 TraesCS5D01G464600 chrUn 77.444 1463 254 46 994 2410 49322776 49324208 0.000000e+00 804.0
24 TraesCS5D01G464600 chrUn 77.983 595 102 14 1797 2378 82309706 82310284 2.530000e-91 346.0
25 TraesCS5D01G464600 chrUn 77.983 595 102 14 1797 2378 286812663 286812085 2.530000e-91 346.0
26 TraesCS5D01G464600 chr1B 78.535 778 135 26 1001 1769 562564874 562564120 1.850000e-132 483.0
27 TraesCS5D01G464600 chr7D 75.684 1024 191 34 1421 2410 47649259 47650258 3.110000e-125 459.0
28 TraesCS5D01G464600 chr7D 84.848 396 54 6 1025 1417 47648783 47649175 8.910000e-106 394.0
29 TraesCS5D01G464600 chr7D 77.526 574 118 10 1797 2369 47609868 47610431 5.480000e-88 335.0
30 TraesCS5D01G464600 chr7D 91.765 170 14 0 111 280 235502569 235502400 1.590000e-58 237.0
31 TraesCS5D01G464600 chr7A 84.248 419 55 9 1006 1417 50182569 50182155 6.880000e-107 398.0
32 TraesCS5D01G464600 chr7A 88.356 146 14 3 2543 2686 723755908 723755764 4.540000e-39 172.0
33 TraesCS5D01G464600 chr7A 80.117 171 18 11 3264 3424 80140574 80140410 2.790000e-21 113.0
34 TraesCS5D01G464600 chr7A 73.801 271 55 15 3074 3338 706034648 706034388 3.640000e-15 93.5
35 TraesCS5D01G464600 chr4A 74.190 926 175 40 1421 2309 662625924 662625026 9.160000e-86 327.0
36 TraesCS5D01G464600 chr4A 80.597 134 21 5 3248 3381 67987708 67987836 7.820000e-17 99.0
37 TraesCS5D01G464600 chr1D 93.452 168 11 0 108 275 311986778 311986611 2.040000e-62 250.0
38 TraesCS5D01G464600 chr1D 92.771 166 12 0 111 276 450202216 450202051 1.230000e-59 241.0
39 TraesCS5D01G464600 chr1D 91.813 171 14 0 112 282 126223342 126223512 4.420000e-59 239.0
40 TraesCS5D01G464600 chr1D 91.813 171 13 1 104 274 9764046 9764215 1.590000e-58 237.0
41 TraesCS5D01G464600 chr1D 82.243 107 11 5 3045 3146 401562952 401562849 6.090000e-13 86.1
42 TraesCS5D01G464600 chr4D 92.771 166 12 0 112 277 433364937 433364772 1.230000e-59 241.0
43 TraesCS5D01G464600 chr4D 84.722 144 20 2 2543 2684 177742284 177742141 3.560000e-30 143.0
44 TraesCS5D01G464600 chr3D 92.814 167 11 1 109 274 486424783 486424949 1.230000e-59 241.0
45 TraesCS5D01G464600 chr3D 81.081 185 23 10 3202 3382 535645886 535646062 1.660000e-28 137.0
46 TraesCS5D01G464600 chr2A 89.928 139 13 1 2543 2680 345374966 345374828 9.760000e-41 178.0
47 TraesCS5D01G464600 chr2A 76.667 240 42 11 2930 3158 692208498 692208262 1.670000e-23 121.0
48 TraesCS5D01G464600 chr2A 84.158 101 10 3 3328 3424 612838726 612838824 3.640000e-15 93.5
49 TraesCS5D01G464600 chr6B 88.406 138 15 1 2543 2679 393235307 393235170 7.600000e-37 165.0
50 TraesCS5D01G464600 chr1A 90.476 105 9 1 2543 2646 38000218 38000114 1.660000e-28 137.0
51 TraesCS5D01G464600 chr1A 74.848 330 58 16 3013 3330 553980790 553980474 3.590000e-25 126.0
52 TraesCS5D01G464600 chr2B 78.199 211 33 10 2958 3161 656378960 656378756 4.640000e-24 122.0
53 TraesCS5D01G464600 chr2B 83.838 99 6 7 3333 3424 704900952 704901047 6.090000e-13 86.1
54 TraesCS5D01G464600 chr4B 86.458 96 9 3 3329 3421 17480073 17480167 6.050000e-18 102.0
55 TraesCS5D01G464600 chr3B 81.250 128 21 3 3212 3338 39645113 39644988 2.170000e-17 100.0
56 TraesCS5D01G464600 chr3A 81.250 128 21 3 3212 3338 724638922 724638797 2.170000e-17 100.0
57 TraesCS5D01G464600 chr2D 84.314 102 9 3 3328 3424 391105290 391105389 3.640000e-15 93.5
58 TraesCS5D01G464600 chr7B 82.692 104 9 8 3328 3424 488137408 488137307 2.190000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G464600 chr5D 507766662 507770085 3423 True 6324.000000 6324 100.000000 1 3424 1 chr5D.!!$R5 3423
1 TraesCS5D01G464600 chr5D 507571763 507573141 1378 True 872.000000 872 78.692000 1019 2402 1 chr5D.!!$R4 1383
2 TraesCS5D01G464600 chr5D 507617052 507618673 1621 True 576.000000 682 84.860000 1044 2409 2 chr5D.!!$R6 1365
3 TraesCS5D01G464600 chr5B 638302096 638304983 2887 True 1743.500000 2761 88.875000 575 3424 2 chr5B.!!$R2 2849
4 TraesCS5D01G464600 chr5A 635378125 635382464 4339 True 1091.000000 2673 86.451333 271 3342 3 chr5A.!!$R4 3071
5 TraesCS5D01G464600 chr5A 635335729 635337744 2015 True 800.666667 1496 90.693000 1013 3256 3 chr5A.!!$R3 2243
6 TraesCS5D01G464600 chr5A 635290554 635294829 4275 True 538.333333 688 86.302667 1019 2413 3 chr5A.!!$R2 1394
7 TraesCS5D01G464600 chrUn 49322776 49324208 1432 False 804.000000 804 77.444000 994 2410 1 chrUn.!!$F1 1416
8 TraesCS5D01G464600 chrUn 82309706 82310284 578 False 346.000000 346 77.983000 1797 2378 1 chrUn.!!$F2 581
9 TraesCS5D01G464600 chrUn 286812085 286812663 578 True 346.000000 346 77.983000 1797 2378 1 chrUn.!!$R1 581
10 TraesCS5D01G464600 chr1B 562564120 562564874 754 True 483.000000 483 78.535000 1001 1769 1 chr1B.!!$R1 768
11 TraesCS5D01G464600 chr7D 47648783 47650258 1475 False 426.500000 459 80.266000 1025 2410 2 chr7D.!!$F2 1385
12 TraesCS5D01G464600 chr7D 47609868 47610431 563 False 335.000000 335 77.526000 1797 2369 1 chr7D.!!$F1 572
13 TraesCS5D01G464600 chr4A 662625026 662625924 898 True 327.000000 327 74.190000 1421 2309 1 chr4A.!!$R1 888

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
379 387 0.036010 CACATCCCTTGCTTCTCCGT 60.036 55.0 0.0 0.0 0.00 4.69 F
475 483 0.106519 CAAAGGGTGGGCTAGATGGG 60.107 60.0 0.0 0.0 0.00 4.00 F
986 1316 0.108138 CCTGATCCCACCGTTCAGAC 60.108 60.0 0.9 0.0 39.69 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 4891 2.109181 GCTCCGGTAGATGGCCAC 59.891 66.667 8.16 1.58 0.00 5.01 R
1748 4971 3.696518 TAGCAGGATCCCGGCAGGT 62.697 63.158 23.60 10.98 46.75 4.00 R
2599 6056 0.108804 TTTAGAACAGCCGAGCGAGG 60.109 55.000 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.543777 TCACCTCTGTGTTGGCTAAC 57.456 50.000 5.91 5.91 43.26 2.34
20 21 2.047061 TCACCTCTGTGTTGGCTAACT 58.953 47.619 14.47 0.00 43.26 2.24
21 22 2.438021 TCACCTCTGTGTTGGCTAACTT 59.562 45.455 14.47 0.00 43.26 2.66
22 23 3.644265 TCACCTCTGTGTTGGCTAACTTA 59.356 43.478 14.47 2.35 43.26 2.24
23 24 3.997021 CACCTCTGTGTTGGCTAACTTAG 59.003 47.826 14.47 11.64 37.72 2.18
24 25 3.901844 ACCTCTGTGTTGGCTAACTTAGA 59.098 43.478 14.47 14.84 37.68 2.10
25 26 4.246458 CCTCTGTGTTGGCTAACTTAGAC 58.754 47.826 14.47 4.47 37.68 2.59
26 27 4.262463 CCTCTGTGTTGGCTAACTTAGACA 60.262 45.833 14.47 8.81 43.47 3.41
27 28 9.985474 CACCTCTGTGTTGGCTAACTTAGACAA 62.985 44.444 12.40 12.40 44.18 3.18
35 36 5.118990 TGGCTAACTTAGACAATCTCATGC 58.881 41.667 1.45 0.00 41.86 4.06
36 37 4.210120 GGCTAACTTAGACAATCTCATGCG 59.790 45.833 0.00 0.00 32.68 4.73
37 38 4.806247 GCTAACTTAGACAATCTCATGCGT 59.194 41.667 0.00 0.00 0.00 5.24
38 39 5.276584 GCTAACTTAGACAATCTCATGCGTG 60.277 44.000 0.00 0.00 0.00 5.34
39 40 4.456280 ACTTAGACAATCTCATGCGTGA 57.544 40.909 8.64 8.64 0.00 4.35
43 44 1.662629 GACAATCTCATGCGTGAGGTG 59.337 52.381 30.75 28.15 45.03 4.00
44 45 1.002430 ACAATCTCATGCGTGAGGTGT 59.998 47.619 30.75 28.69 45.03 4.16
45 46 1.395954 CAATCTCATGCGTGAGGTGTG 59.604 52.381 30.75 22.22 45.03 3.82
46 47 1.002430 AATCTCATGCGTGAGGTGTGT 59.998 47.619 30.75 10.74 45.03 3.72
47 48 2.449548 CTCATGCGTGAGGTGTGTC 58.550 57.895 25.59 0.00 46.56 3.67
48 49 1.005037 TCATGCGTGAGGTGTGTCC 60.005 57.895 3.97 0.00 0.00 4.02
49 50 2.048222 ATGCGTGAGGTGTGTCCG 60.048 61.111 0.00 0.00 41.99 4.79
50 51 3.589654 ATGCGTGAGGTGTGTCCGG 62.590 63.158 0.00 0.00 41.99 5.14
51 52 4.295119 GCGTGAGGTGTGTCCGGT 62.295 66.667 0.00 0.00 41.99 5.28
52 53 2.922950 GCGTGAGGTGTGTCCGGTA 61.923 63.158 0.00 0.00 41.99 4.02
53 54 1.080974 CGTGAGGTGTGTCCGGTAC 60.081 63.158 0.00 2.66 41.99 3.34
54 55 1.798234 CGTGAGGTGTGTCCGGTACA 61.798 60.000 0.00 5.71 41.99 2.90
55 56 0.390124 GTGAGGTGTGTCCGGTACAA 59.610 55.000 14.25 0.00 40.63 2.41
56 57 1.001633 GTGAGGTGTGTCCGGTACAAT 59.998 52.381 14.25 7.75 40.63 2.71
57 58 2.231964 GTGAGGTGTGTCCGGTACAATA 59.768 50.000 14.25 3.00 40.63 1.90
58 59 3.101437 TGAGGTGTGTCCGGTACAATAT 58.899 45.455 14.25 5.39 40.63 1.28
59 60 3.118920 TGAGGTGTGTCCGGTACAATATG 60.119 47.826 14.25 0.00 40.63 1.78
60 61 3.101437 AGGTGTGTCCGGTACAATATGA 58.899 45.455 14.25 0.00 40.63 2.15
61 62 3.709653 AGGTGTGTCCGGTACAATATGAT 59.290 43.478 14.25 0.00 40.63 2.45
62 63 4.056050 GGTGTGTCCGGTACAATATGATC 58.944 47.826 14.25 2.83 40.63 2.92
63 64 4.442332 GGTGTGTCCGGTACAATATGATCA 60.442 45.833 14.25 0.00 40.63 2.92
64 65 4.506654 GTGTGTCCGGTACAATATGATCAC 59.493 45.833 14.25 9.66 40.63 3.06
65 66 4.056050 GTGTCCGGTACAATATGATCACC 58.944 47.826 0.00 0.00 40.63 4.02
66 67 3.964688 TGTCCGGTACAATATGATCACCT 59.035 43.478 0.00 0.00 34.29 4.00
67 68 4.038763 TGTCCGGTACAATATGATCACCTC 59.961 45.833 0.00 0.00 34.29 3.85
68 69 4.281182 GTCCGGTACAATATGATCACCTCT 59.719 45.833 0.00 0.00 0.00 3.69
69 70 4.280929 TCCGGTACAATATGATCACCTCTG 59.719 45.833 0.00 0.00 0.00 3.35
70 71 4.039245 CCGGTACAATATGATCACCTCTGT 59.961 45.833 0.00 2.17 0.00 3.41
71 72 5.243060 CCGGTACAATATGATCACCTCTGTA 59.757 44.000 0.00 1.16 0.00 2.74
72 73 6.071334 CCGGTACAATATGATCACCTCTGTAT 60.071 42.308 0.00 0.00 0.00 2.29
73 74 7.378966 CGGTACAATATGATCACCTCTGTATT 58.621 38.462 0.00 0.00 0.00 1.89
74 75 8.520351 CGGTACAATATGATCACCTCTGTATTA 58.480 37.037 0.00 0.00 0.00 0.98
75 76 9.640963 GGTACAATATGATCACCTCTGTATTAC 57.359 37.037 0.00 0.00 0.00 1.89
76 77 9.640963 GTACAATATGATCACCTCTGTATTACC 57.359 37.037 0.00 0.00 0.00 2.85
77 78 8.262601 ACAATATGATCACCTCTGTATTACCA 57.737 34.615 0.00 0.00 0.00 3.25
78 79 8.884323 ACAATATGATCACCTCTGTATTACCAT 58.116 33.333 0.00 0.00 0.00 3.55
79 80 9.730705 CAATATGATCACCTCTGTATTACCATT 57.269 33.333 0.00 0.00 0.00 3.16
106 107 8.625786 TTTTAACCTTTACTATTGGTCCTCAC 57.374 34.615 0.00 0.00 32.98 3.51
107 108 4.467198 ACCTTTACTATTGGTCCTCACG 57.533 45.455 0.00 0.00 0.00 4.35
108 109 4.091549 ACCTTTACTATTGGTCCTCACGA 58.908 43.478 0.00 0.00 0.00 4.35
109 110 4.529377 ACCTTTACTATTGGTCCTCACGAA 59.471 41.667 0.00 0.00 0.00 3.85
110 111 5.109903 CCTTTACTATTGGTCCTCACGAAG 58.890 45.833 0.00 0.00 0.00 3.79
111 112 9.101595 AACCTTTACTATTGGTCCTCACGAAGT 62.102 40.741 0.00 0.00 35.08 3.01
112 113 6.127535 CCTTTACTATTGGTCCTCACGAAGTA 60.128 42.308 0.00 0.00 41.61 2.24
113 114 4.715527 ACTATTGGTCCTCACGAAGTAC 57.284 45.455 0.00 0.00 41.61 2.73
114 115 4.342359 ACTATTGGTCCTCACGAAGTACT 58.658 43.478 0.00 0.00 41.61 2.73
115 116 3.870633 ATTGGTCCTCACGAAGTACTC 57.129 47.619 0.00 0.00 41.61 2.59
116 117 1.542492 TGGTCCTCACGAAGTACTCC 58.458 55.000 0.00 0.00 41.61 3.85
117 118 0.816373 GGTCCTCACGAAGTACTCCC 59.184 60.000 0.00 0.00 41.61 4.30
118 119 1.616456 GGTCCTCACGAAGTACTCCCT 60.616 57.143 0.00 0.00 41.61 4.20
119 120 1.744522 GTCCTCACGAAGTACTCCCTC 59.255 57.143 0.00 0.00 41.61 4.30
120 121 1.104630 CCTCACGAAGTACTCCCTCC 58.895 60.000 0.00 0.00 41.61 4.30
121 122 0.733729 CTCACGAAGTACTCCCTCCG 59.266 60.000 0.00 0.00 41.61 4.63
122 123 0.037303 TCACGAAGTACTCCCTCCGT 59.963 55.000 0.00 0.00 41.61 4.69
123 124 0.886563 CACGAAGTACTCCCTCCGTT 59.113 55.000 0.00 0.00 41.61 4.44
124 125 1.135460 CACGAAGTACTCCCTCCGTTC 60.135 57.143 0.00 0.00 41.61 3.95
125 126 0.455005 CGAAGTACTCCCTCCGTTCC 59.545 60.000 0.00 0.00 0.00 3.62
126 127 1.849977 GAAGTACTCCCTCCGTTCCT 58.150 55.000 0.00 0.00 0.00 3.36
127 128 2.681976 CGAAGTACTCCCTCCGTTCCTA 60.682 54.545 0.00 0.00 0.00 2.94
128 129 3.359950 GAAGTACTCCCTCCGTTCCTAA 58.640 50.000 0.00 0.00 0.00 2.69
129 130 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
130 131 3.782992 AGTACTCCCTCCGTTCCTAAAA 58.217 45.455 0.00 0.00 0.00 1.52
131 132 4.162651 AGTACTCCCTCCGTTCCTAAAAA 58.837 43.478 0.00 0.00 0.00 1.94
132 133 4.781621 AGTACTCCCTCCGTTCCTAAAAAT 59.218 41.667 0.00 0.00 0.00 1.82
133 134 5.960202 AGTACTCCCTCCGTTCCTAAAAATA 59.040 40.000 0.00 0.00 0.00 1.40
134 135 5.767277 ACTCCCTCCGTTCCTAAAAATAA 57.233 39.130 0.00 0.00 0.00 1.40
135 136 6.130692 ACTCCCTCCGTTCCTAAAAATAAA 57.869 37.500 0.00 0.00 0.00 1.40
136 137 6.728411 ACTCCCTCCGTTCCTAAAAATAAAT 58.272 36.000 0.00 0.00 0.00 1.40
137 138 6.827251 ACTCCCTCCGTTCCTAAAAATAAATC 59.173 38.462 0.00 0.00 0.00 2.17
138 139 6.723339 TCCCTCCGTTCCTAAAAATAAATCA 58.277 36.000 0.00 0.00 0.00 2.57
139 140 7.351166 TCCCTCCGTTCCTAAAAATAAATCAT 58.649 34.615 0.00 0.00 0.00 2.45
140 141 7.837187 TCCCTCCGTTCCTAAAAATAAATCATT 59.163 33.333 0.00 0.00 0.00 2.57
141 142 9.127277 CCCTCCGTTCCTAAAAATAAATCATTA 57.873 33.333 0.00 0.00 0.00 1.90
162 163 9.310449 TCATTATAGGGATTTCACTAGGTAGAC 57.690 37.037 0.00 0.00 34.97 2.59
163 164 9.315363 CATTATAGGGATTTCACTAGGTAGACT 57.685 37.037 0.00 0.00 34.97 3.24
165 166 9.804977 TTATAGGGATTTCACTAGGTAGACTAC 57.195 37.037 3.86 3.86 34.97 2.73
166 167 6.088541 AGGGATTTCACTAGGTAGACTACA 57.911 41.667 14.48 0.00 0.00 2.74
167 168 6.684538 AGGGATTTCACTAGGTAGACTACAT 58.315 40.000 14.48 9.91 0.00 2.29
168 169 7.823635 AGGGATTTCACTAGGTAGACTACATA 58.176 38.462 14.48 10.55 0.00 2.29
169 170 7.724951 AGGGATTTCACTAGGTAGACTACATAC 59.275 40.741 14.48 0.00 0.00 2.39
170 171 7.308469 GGGATTTCACTAGGTAGACTACATACG 60.308 44.444 14.48 8.15 0.00 3.06
171 172 7.443575 GGATTTCACTAGGTAGACTACATACGA 59.556 40.741 14.48 6.33 0.00 3.43
172 173 8.743085 ATTTCACTAGGTAGACTACATACGAA 57.257 34.615 14.48 11.24 0.00 3.85
173 174 7.783090 TTCACTAGGTAGACTACATACGAAG 57.217 40.000 14.48 4.37 0.00 3.79
174 175 5.757320 TCACTAGGTAGACTACATACGAAGC 59.243 44.000 14.48 0.00 0.00 3.86
175 176 5.526479 CACTAGGTAGACTACATACGAAGCA 59.474 44.000 14.48 0.00 0.00 3.91
176 177 6.037940 CACTAGGTAGACTACATACGAAGCAA 59.962 42.308 14.48 0.00 0.00 3.91
177 178 5.909621 AGGTAGACTACATACGAAGCAAA 57.090 39.130 14.48 0.00 0.00 3.68
178 179 6.276832 AGGTAGACTACATACGAAGCAAAA 57.723 37.500 14.48 0.00 0.00 2.44
179 180 6.875076 AGGTAGACTACATACGAAGCAAAAT 58.125 36.000 14.48 0.00 0.00 1.82
180 181 6.757010 AGGTAGACTACATACGAAGCAAAATG 59.243 38.462 14.48 0.00 0.00 2.32
181 182 6.018994 GGTAGACTACATACGAAGCAAAATGG 60.019 42.308 14.48 0.00 0.00 3.16
182 183 5.730550 AGACTACATACGAAGCAAAATGGA 58.269 37.500 0.00 0.00 0.00 3.41
183 184 6.349300 AGACTACATACGAAGCAAAATGGAT 58.651 36.000 0.00 0.00 0.00 3.41
184 185 6.258727 AGACTACATACGAAGCAAAATGGATG 59.741 38.462 0.00 0.00 0.00 3.51
185 186 6.112734 ACTACATACGAAGCAAAATGGATGA 58.887 36.000 0.00 0.00 0.00 2.92
186 187 5.895636 ACATACGAAGCAAAATGGATGAA 57.104 34.783 0.00 0.00 0.00 2.57
187 188 6.455360 ACATACGAAGCAAAATGGATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
188 189 6.498304 ACATACGAAGCAAAATGGATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
189 190 6.319658 ACATACGAAGCAAAATGGATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
190 191 7.498900 ACATACGAAGCAAAATGGATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
191 192 6.949352 ACGAAGCAAAATGGATGAATCTAT 57.051 33.333 0.00 0.00 0.00 1.98
192 193 9.725019 ATACGAAGCAAAATGGATGAATCTATA 57.275 29.630 0.00 0.00 0.00 1.31
193 194 7.865707 ACGAAGCAAAATGGATGAATCTATAC 58.134 34.615 0.00 0.00 0.00 1.47
194 195 7.716998 ACGAAGCAAAATGGATGAATCTATACT 59.283 33.333 0.00 0.00 0.00 2.12
195 196 8.562892 CGAAGCAAAATGGATGAATCTATACTT 58.437 33.333 0.00 0.00 0.00 2.24
218 219 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
223 224 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
224 225 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
225 226 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
226 227 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
227 228 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
228 229 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
229 230 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
230 231 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
233 234 7.905604 ATACATCCGTATGTGGTTCATAATG 57.094 36.000 3.56 0.00 45.99 1.90
234 235 5.924356 ACATCCGTATGTGGTTCATAATGA 58.076 37.500 0.00 0.00 44.79 2.57
235 236 6.353323 ACATCCGTATGTGGTTCATAATGAA 58.647 36.000 0.00 0.00 44.79 2.57
236 237 6.826231 ACATCCGTATGTGGTTCATAATGAAA 59.174 34.615 0.00 0.00 44.79 2.69
237 238 7.502226 ACATCCGTATGTGGTTCATAATGAAAT 59.498 33.333 0.00 0.00 44.79 2.17
238 239 7.490962 TCCGTATGTGGTTCATAATGAAATC 57.509 36.000 0.00 0.00 38.22 2.17
239 240 7.279615 TCCGTATGTGGTTCATAATGAAATCT 58.720 34.615 0.00 0.00 38.22 2.40
240 241 7.441157 TCCGTATGTGGTTCATAATGAAATCTC 59.559 37.037 0.00 0.00 38.22 2.75
241 242 7.442364 CCGTATGTGGTTCATAATGAAATCTCT 59.558 37.037 0.00 0.00 38.22 3.10
242 243 9.476202 CGTATGTGGTTCATAATGAAATCTCTA 57.524 33.333 0.00 0.00 38.22 2.43
245 246 9.685276 ATGTGGTTCATAATGAAATCTCTACAA 57.315 29.630 0.00 0.00 38.22 2.41
246 247 9.513906 TGTGGTTCATAATGAAATCTCTACAAA 57.486 29.630 0.00 0.00 38.22 2.83
247 248 9.994432 GTGGTTCATAATGAAATCTCTACAAAG 57.006 33.333 0.00 0.00 38.22 2.77
248 249 9.958180 TGGTTCATAATGAAATCTCTACAAAGA 57.042 29.630 0.00 0.00 38.22 2.52
268 269 9.379791 ACAAAGACTTATATTTAGAAACGGAGG 57.620 33.333 0.00 0.00 0.00 4.30
269 270 8.827677 CAAAGACTTATATTTAGAAACGGAGGG 58.172 37.037 0.00 0.00 0.00 4.30
298 299 5.527026 ACTTTTCTCATTCCTCCTCCATT 57.473 39.130 0.00 0.00 0.00 3.16
301 302 5.365021 TTTCTCATTCCTCCTCCATTCTC 57.635 43.478 0.00 0.00 0.00 2.87
307 308 1.211456 CCTCCTCCATTCTCTTGCCT 58.789 55.000 0.00 0.00 0.00 4.75
311 319 1.836166 CCTCCATTCTCTTGCCTCTCA 59.164 52.381 0.00 0.00 0.00 3.27
313 321 3.468770 CTCCATTCTCTTGCCTCTCATG 58.531 50.000 0.00 0.00 0.00 3.07
318 326 0.106335 CTCTTGCCTCTCATGCCGAT 59.894 55.000 0.00 0.00 0.00 4.18
329 337 2.103094 CTCATGCCGATCCAACCTCTAA 59.897 50.000 0.00 0.00 0.00 2.10
331 339 2.396590 TGCCGATCCAACCTCTAAAC 57.603 50.000 0.00 0.00 0.00 2.01
339 347 5.978322 CGATCCAACCTCTAAACTAGTAAGC 59.022 44.000 0.00 0.00 0.00 3.09
340 348 5.672421 TCCAACCTCTAAACTAGTAAGCC 57.328 43.478 0.00 0.00 0.00 4.35
349 357 4.803098 AAACTAGTAAGCCACTCGATGT 57.197 40.909 0.00 0.00 38.80 3.06
368 376 3.023949 GCTCACTCGCCACATCCCT 62.024 63.158 0.00 0.00 0.00 4.20
372 380 2.270205 CTCGCCACATCCCTTGCT 59.730 61.111 0.00 0.00 0.00 3.91
378 386 0.745845 CCACATCCCTTGCTTCTCCG 60.746 60.000 0.00 0.00 0.00 4.63
379 387 0.036010 CACATCCCTTGCTTCTCCGT 60.036 55.000 0.00 0.00 0.00 4.69
386 394 2.489971 CCTTGCTTCTCCGTTGTAACA 58.510 47.619 0.00 0.00 0.00 2.41
418 426 1.068895 AGATGATGGAGCTCAGCGAAG 59.931 52.381 17.19 0.00 36.67 3.79
427 435 1.078848 CTCAGCGAAGGTTGGGGAG 60.079 63.158 0.00 0.00 33.74 4.30
454 462 2.894565 CGCGGAGGGTAGTAGAGCG 61.895 68.421 0.00 0.00 40.14 5.03
461 469 0.179081 GGGTAGTAGAGCGGCAAAGG 60.179 60.000 1.45 0.00 0.00 3.11
471 479 2.966732 CGGCAAAGGGTGGGCTAGA 61.967 63.158 0.00 0.00 0.00 2.43
472 480 1.615262 GGCAAAGGGTGGGCTAGAT 59.385 57.895 0.00 0.00 0.00 1.98
473 481 0.753111 GGCAAAGGGTGGGCTAGATG 60.753 60.000 0.00 0.00 0.00 2.90
474 482 0.753111 GCAAAGGGTGGGCTAGATGG 60.753 60.000 0.00 0.00 0.00 3.51
475 483 0.106519 CAAAGGGTGGGCTAGATGGG 60.107 60.000 0.00 0.00 0.00 4.00
476 484 1.289244 AAAGGGTGGGCTAGATGGGG 61.289 60.000 0.00 0.00 0.00 4.96
477 485 3.178611 GGGTGGGCTAGATGGGGG 61.179 72.222 0.00 0.00 0.00 5.40
491 499 4.364686 GGGGGAGGGGGAGTGGAA 62.365 72.222 0.00 0.00 0.00 3.53
492 500 2.692741 GGGGAGGGGGAGTGGAAG 60.693 72.222 0.00 0.00 0.00 3.46
493 501 2.692741 GGGAGGGGGAGTGGAAGG 60.693 72.222 0.00 0.00 0.00 3.46
494 502 2.692741 GGAGGGGGAGTGGAAGGG 60.693 72.222 0.00 0.00 0.00 3.95
495 503 2.125225 GAGGGGGAGTGGAAGGGT 59.875 66.667 0.00 0.00 0.00 4.34
496 504 2.204151 AGGGGGAGTGGAAGGGTG 60.204 66.667 0.00 0.00 0.00 4.61
497 505 2.531942 GGGGGAGTGGAAGGGTGT 60.532 66.667 0.00 0.00 0.00 4.16
498 506 2.603652 GGGGGAGTGGAAGGGTGTC 61.604 68.421 0.00 0.00 0.00 3.67
499 507 2.663196 GGGAGTGGAAGGGTGTCG 59.337 66.667 0.00 0.00 0.00 4.35
500 508 2.663196 GGAGTGGAAGGGTGTCGG 59.337 66.667 0.00 0.00 0.00 4.79
501 509 2.047179 GAGTGGAAGGGTGTCGGC 60.047 66.667 0.00 0.00 0.00 5.54
502 510 3.934391 GAGTGGAAGGGTGTCGGCG 62.934 68.421 0.00 0.00 0.00 6.46
519 527 3.650950 GCTGGGCAAGGTCAGGGA 61.651 66.667 0.00 0.00 0.00 4.20
520 528 2.673523 CTGGGCAAGGTCAGGGAG 59.326 66.667 0.00 0.00 0.00 4.30
521 529 2.935481 TGGGCAAGGTCAGGGAGG 60.935 66.667 0.00 0.00 0.00 4.30
522 530 4.432741 GGGCAAGGTCAGGGAGGC 62.433 72.222 0.00 0.00 0.00 4.70
523 531 4.432741 GGCAAGGTCAGGGAGGCC 62.433 72.222 0.00 0.00 44.66 5.19
546 554 4.873129 CGGGCGGGTCGAGATGTG 62.873 72.222 0.00 0.00 0.00 3.21
547 555 4.530857 GGGCGGGTCGAGATGTGG 62.531 72.222 0.00 0.00 0.00 4.17
548 556 3.458163 GGCGGGTCGAGATGTGGA 61.458 66.667 0.00 0.00 0.00 4.02
549 557 2.797278 GGCGGGTCGAGATGTGGAT 61.797 63.158 0.00 0.00 0.00 3.41
550 558 1.592669 GCGGGTCGAGATGTGGATG 60.593 63.158 0.00 0.00 0.00 3.51
551 559 1.592669 CGGGTCGAGATGTGGATGC 60.593 63.158 0.00 0.00 0.00 3.91
552 560 1.592669 GGGTCGAGATGTGGATGCG 60.593 63.158 0.00 0.00 0.00 4.73
553 561 1.141881 GGTCGAGATGTGGATGCGT 59.858 57.895 0.00 0.00 0.00 5.24
554 562 0.460284 GGTCGAGATGTGGATGCGTT 60.460 55.000 0.00 0.00 0.00 4.84
555 563 1.359848 GTCGAGATGTGGATGCGTTT 58.640 50.000 0.00 0.00 0.00 3.60
556 564 1.732259 GTCGAGATGTGGATGCGTTTT 59.268 47.619 0.00 0.00 0.00 2.43
632 957 3.501828 TGATCATTTCCACTTGGTGTTCG 59.498 43.478 0.00 0.00 36.34 3.95
673 1000 9.611284 CTGATTCTTCGAAACAATGAAAATGTA 57.389 29.630 0.00 0.00 0.00 2.29
699 1026 5.942872 ACTTTAGCAAAGATGAAACATCCG 58.057 37.500 13.35 0.16 41.02 4.18
786 1113 5.357032 GTGGTATTGTGTCAAATTCCCCTAG 59.643 44.000 0.00 0.00 0.00 3.02
791 1118 3.274288 GTGTCAAATTCCCCTAGCTCTG 58.726 50.000 0.00 0.00 0.00 3.35
792 1119 2.912956 TGTCAAATTCCCCTAGCTCTGT 59.087 45.455 0.00 0.00 0.00 3.41
793 1120 3.055094 TGTCAAATTCCCCTAGCTCTGTC 60.055 47.826 0.00 0.00 0.00 3.51
836 1163 8.894731 TCCAAGCATCTATCTACTCGTATAATC 58.105 37.037 0.00 0.00 0.00 1.75
951 1278 1.303643 GGAGACCAGCCACCAAAGG 60.304 63.158 0.00 0.00 0.00 3.11
984 1314 1.221840 CCCTGATCCCACCGTTCAG 59.778 63.158 0.00 0.00 37.84 3.02
985 1315 1.264749 CCCTGATCCCACCGTTCAGA 61.265 60.000 0.90 0.00 39.69 3.27
986 1316 0.108138 CCTGATCCCACCGTTCAGAC 60.108 60.000 0.90 0.00 39.69 3.51
987 1317 0.898320 CTGATCCCACCGTTCAGACT 59.102 55.000 0.00 0.00 39.69 3.24
988 1318 1.276421 CTGATCCCACCGTTCAGACTT 59.724 52.381 0.00 0.00 39.69 3.01
989 1319 1.275291 TGATCCCACCGTTCAGACTTC 59.725 52.381 0.00 0.00 0.00 3.01
1649 4871 2.668212 CATGGACCGCGTGTGGTT 60.668 61.111 4.92 0.00 44.01 3.67
1748 4971 3.405093 CTTCCAGCAGCCCGCCATA 62.405 63.158 0.00 0.00 44.04 2.74
2162 5454 1.227383 CCCACTGGTTATGCTCCCC 59.773 63.158 0.00 0.00 0.00 4.81
2451 5746 3.760151 TGTTCCAGATTTGGCAAGATCAG 59.240 43.478 18.17 12.85 44.63 2.90
2483 5821 5.923665 ACGTCTGATGGATTTCGTTTAAAC 58.076 37.500 8.35 8.35 0.00 2.01
2487 5825 6.581166 GTCTGATGGATTTCGTTTAAACAACC 59.419 38.462 18.07 12.39 0.00 3.77
2493 5831 6.490721 TGGATTTCGTTTAAACAACCTGGTAT 59.509 34.615 18.07 2.23 0.00 2.73
2494 5832 6.804783 GGATTTCGTTTAAACAACCTGGTATG 59.195 38.462 18.07 3.63 0.00 2.39
2496 5834 6.696441 TTCGTTTAAACAACCTGGTATGTT 57.304 33.333 18.07 16.48 41.31 2.71
2497 5835 6.062434 TCGTTTAAACAACCTGGTATGTTG 57.938 37.500 18.07 10.36 46.60 3.33
2523 5980 3.691049 AAAATGCGAATCCGGTATGTG 57.309 42.857 0.00 0.00 36.06 3.21
2525 5982 0.756294 ATGCGAATCCGGTATGTGGA 59.244 50.000 0.00 0.00 40.46 4.02
2527 5984 1.140052 TGCGAATCCGGTATGTGGAAT 59.860 47.619 0.00 0.00 39.39 3.01
2528 5985 2.365941 TGCGAATCCGGTATGTGGAATA 59.634 45.455 0.00 0.00 39.39 1.75
2529 5986 2.735134 GCGAATCCGGTATGTGGAATAC 59.265 50.000 0.00 0.00 39.39 1.89
2533 5990 5.805486 CGAATCCGGTATGTGGAATACTATG 59.195 44.000 0.00 0.00 39.39 2.23
2535 5992 7.362315 CGAATCCGGTATGTGGAATACTATGTA 60.362 40.741 0.00 0.00 39.39 2.29
2536 5993 7.973048 ATCCGGTATGTGGAATACTATGTAT 57.027 36.000 0.00 0.00 39.39 2.29
2538 5995 8.284945 TCCGGTATGTGGAATACTATGTATAC 57.715 38.462 0.00 0.00 30.98 1.47
2539 5996 8.111545 TCCGGTATGTGGAATACTATGTATACT 58.888 37.037 0.00 0.00 30.98 2.12
2540 5997 8.404000 CCGGTATGTGGAATACTATGTATACTC 58.596 40.741 4.17 0.00 0.00 2.59
2544 6001 7.776618 TGTGGAATACTATGTATACTCTGGG 57.223 40.000 4.17 0.00 0.00 4.45
2545 6002 6.724441 TGTGGAATACTATGTATACTCTGGGG 59.276 42.308 4.17 0.00 0.00 4.96
2546 6003 5.720041 TGGAATACTATGTATACTCTGGGGC 59.280 44.000 4.17 0.00 0.00 5.80
2549 6006 4.200447 ACTATGTATACTCTGGGGCTGT 57.800 45.455 4.17 0.00 0.00 4.40
2550 6007 4.557705 ACTATGTATACTCTGGGGCTGTT 58.442 43.478 4.17 0.00 0.00 3.16
2551 6008 4.589374 ACTATGTATACTCTGGGGCTGTTC 59.411 45.833 4.17 0.00 0.00 3.18
2552 6009 1.754803 TGTATACTCTGGGGCTGTTCG 59.245 52.381 4.17 0.00 0.00 3.95
2554 6011 0.325296 ATACTCTGGGGCTGTTCGGA 60.325 55.000 0.00 0.00 0.00 4.55
2556 6013 1.374947 CTCTGGGGCTGTTCGGAAA 59.625 57.895 0.00 0.00 0.00 3.13
2557 6014 0.955919 CTCTGGGGCTGTTCGGAAAC 60.956 60.000 0.00 0.00 35.85 2.78
2558 6015 1.971695 CTGGGGCTGTTCGGAAACC 60.972 63.158 0.00 0.00 34.28 3.27
2560 6017 2.265904 GGGGCTGTTCGGAAACCAC 61.266 63.158 0.00 0.00 34.28 4.16
2562 6019 2.265904 GGCTGTTCGGAAACCACCC 61.266 63.158 0.00 0.00 34.28 4.61
2565 6022 2.281276 GTTCGGAAACCACCCGCT 60.281 61.111 0.00 0.00 46.10 5.52
2566 6023 2.031465 TTCGGAAACCACCCGCTC 59.969 61.111 0.00 0.00 46.10 5.03
2567 6024 3.540367 TTCGGAAACCACCCGCTCC 62.540 63.158 0.00 0.00 46.10 4.70
2569 6026 2.359975 GGAAACCACCCGCTCCAG 60.360 66.667 0.00 0.00 0.00 3.86
2572 6029 0.536460 GAAACCACCCGCTCCAGAAA 60.536 55.000 0.00 0.00 0.00 2.52
2574 6031 0.322546 AACCACCCGCTCCAGAAATC 60.323 55.000 0.00 0.00 0.00 2.17
2575 6032 1.299648 CCACCCGCTCCAGAAATCA 59.700 57.895 0.00 0.00 0.00 2.57
2576 6033 1.026718 CCACCCGCTCCAGAAATCAC 61.027 60.000 0.00 0.00 0.00 3.06
2577 6034 0.321564 CACCCGCTCCAGAAATCACA 60.322 55.000 0.00 0.00 0.00 3.58
2578 6035 0.036010 ACCCGCTCCAGAAATCACAG 60.036 55.000 0.00 0.00 0.00 3.66
2579 6036 0.250234 CCCGCTCCAGAAATCACAGA 59.750 55.000 0.00 0.00 0.00 3.41
2580 6037 1.339055 CCCGCTCCAGAAATCACAGAA 60.339 52.381 0.00 0.00 0.00 3.02
2582 6039 2.611292 CCGCTCCAGAAATCACAGAATC 59.389 50.000 0.00 0.00 0.00 2.52
2585 6042 3.376546 GCTCCAGAAATCACAGAATCCAC 59.623 47.826 0.00 0.00 0.00 4.02
2586 6043 3.599343 TCCAGAAATCACAGAATCCACG 58.401 45.455 0.00 0.00 0.00 4.94
2587 6044 2.679837 CCAGAAATCACAGAATCCACGG 59.320 50.000 0.00 0.00 0.00 4.94
2588 6045 3.599343 CAGAAATCACAGAATCCACGGA 58.401 45.455 0.00 0.00 0.00 4.69
2589 6046 3.620374 CAGAAATCACAGAATCCACGGAG 59.380 47.826 0.00 0.00 0.00 4.63
2591 6048 4.466370 AGAAATCACAGAATCCACGGAGTA 59.534 41.667 0.00 0.00 41.61 2.59
2592 6049 3.802948 ATCACAGAATCCACGGAGTAC 57.197 47.619 0.00 0.00 41.61 2.73
2593 6050 1.822990 TCACAGAATCCACGGAGTACC 59.177 52.381 0.00 0.00 41.61 3.34
2594 6051 1.548719 CACAGAATCCACGGAGTACCA 59.451 52.381 0.00 0.00 41.61 3.25
2595 6052 2.028476 CACAGAATCCACGGAGTACCAA 60.028 50.000 0.00 0.00 41.61 3.67
2596 6053 2.838202 ACAGAATCCACGGAGTACCAAT 59.162 45.455 0.00 0.00 41.61 3.16
2598 6055 4.261801 CAGAATCCACGGAGTACCAATTT 58.738 43.478 0.00 0.00 41.61 1.82
2599 6056 4.332819 CAGAATCCACGGAGTACCAATTTC 59.667 45.833 0.00 0.00 41.61 2.17
2600 6057 2.773993 TCCACGGAGTACCAATTTCC 57.226 50.000 0.00 0.00 41.61 3.13
2602 6059 2.235402 TCCACGGAGTACCAATTTCCTC 59.765 50.000 0.00 0.00 41.61 3.71
2603 6060 2.268298 CACGGAGTACCAATTTCCTCG 58.732 52.381 0.00 0.00 41.61 4.63
2605 6062 1.134788 CGGAGTACCAATTTCCTCGCT 60.135 52.381 0.00 0.00 35.59 4.93
2607 6064 2.194271 GAGTACCAATTTCCTCGCTCG 58.806 52.381 0.00 0.00 0.00 5.03
2608 6065 1.134788 AGTACCAATTTCCTCGCTCGG 60.135 52.381 0.00 0.00 0.00 4.63
2609 6066 0.461339 TACCAATTTCCTCGCTCGGC 60.461 55.000 0.00 0.00 0.00 5.54
2610 6067 1.450312 CCAATTTCCTCGCTCGGCT 60.450 57.895 0.00 0.00 0.00 5.52
2611 6068 1.709147 CCAATTTCCTCGCTCGGCTG 61.709 60.000 0.00 0.00 0.00 4.85
2612 6069 1.021390 CAATTTCCTCGCTCGGCTGT 61.021 55.000 0.00 0.00 0.00 4.40
2613 6070 0.321653 AATTTCCTCGCTCGGCTGTT 60.322 50.000 0.00 0.00 0.00 3.16
2614 6071 0.741221 ATTTCCTCGCTCGGCTGTTC 60.741 55.000 0.00 0.00 0.00 3.18
2615 6072 1.816863 TTTCCTCGCTCGGCTGTTCT 61.817 55.000 0.00 0.00 0.00 3.01
2616 6073 0.963856 TTCCTCGCTCGGCTGTTCTA 60.964 55.000 0.00 0.00 0.00 2.10
2619 6076 0.992802 CTCGCTCGGCTGTTCTAAAC 59.007 55.000 0.00 0.00 0.00 2.01
2620 6077 0.601558 TCGCTCGGCTGTTCTAAACT 59.398 50.000 0.00 0.00 0.00 2.66
2621 6078 0.716108 CGCTCGGCTGTTCTAAACTG 59.284 55.000 0.00 0.00 0.00 3.16
2628 6085 2.977405 CTGTTCTAAACTGCAGCACC 57.023 50.000 15.27 0.00 0.00 5.01
2629 6086 1.195448 CTGTTCTAAACTGCAGCACCG 59.805 52.381 15.27 0.00 0.00 4.94
2630 6087 0.517316 GTTCTAAACTGCAGCACCGG 59.483 55.000 15.27 0.00 0.00 5.28
2631 6088 1.234615 TTCTAAACTGCAGCACCGGC 61.235 55.000 15.27 0.00 41.61 6.13
2641 6098 4.704833 GCACCGGCTGCTTCTGGA 62.705 66.667 18.16 0.00 43.33 3.86
2642 6099 2.435586 CACCGGCTGCTTCTGGAG 60.436 66.667 0.00 0.00 36.35 3.86
2644 6101 2.435586 CCGGCTGCTTCTGGAGTG 60.436 66.667 0.00 0.00 34.34 3.51
2645 6102 2.435586 CGGCTGCTTCTGGAGTGG 60.436 66.667 0.00 0.00 33.91 4.00
2646 6103 2.045536 GGCTGCTTCTGGAGTGGG 60.046 66.667 0.00 0.00 33.91 4.61
2647 6104 2.753029 GCTGCTTCTGGAGTGGGT 59.247 61.111 0.00 0.00 33.91 4.51
2648 6105 1.376553 GCTGCTTCTGGAGTGGGTC 60.377 63.158 0.00 0.00 33.91 4.46
2657 6114 2.529389 GAGTGGGTCCTGTGGGGT 60.529 66.667 0.00 0.00 36.25 4.95
2659 6116 3.966543 GTGGGTCCTGTGGGGTGG 61.967 72.222 0.00 0.00 36.25 4.61
2660 6117 4.194497 TGGGTCCTGTGGGGTGGA 62.194 66.667 0.00 0.00 36.25 4.02
2661 6118 3.330720 GGGTCCTGTGGGGTGGAG 61.331 72.222 0.00 0.00 36.25 3.86
2662 6119 3.330720 GGTCCTGTGGGGTGGAGG 61.331 72.222 0.00 0.00 36.25 4.30
2663 6120 3.330720 GTCCTGTGGGGTGGAGGG 61.331 72.222 0.00 0.00 36.25 4.30
2665 6122 3.330720 CCTGTGGGGTGGAGGGAC 61.331 72.222 0.00 0.00 0.00 4.46
2677 6134 4.115270 AGGGACTCCGAACAGACC 57.885 61.111 0.00 0.00 38.33 3.85
2689 6884 3.435671 CCGAACAGACCCTTTGTATGAAC 59.564 47.826 0.00 0.00 38.49 3.18
2692 6887 3.660865 ACAGACCCTTTGTATGAACGAC 58.339 45.455 0.00 0.00 38.49 4.34
2703 6898 7.095397 CCTTTGTATGAACGACAGTGTGAAATA 60.095 37.037 0.00 0.00 0.00 1.40
2765 6962 9.672086 TTTCACAACGAGAAATTTTAACATAGG 57.328 29.630 0.00 0.00 30.56 2.57
2768 6965 6.433093 ACAACGAGAAATTTTAACATAGGCCT 59.567 34.615 11.78 11.78 0.00 5.19
2770 6967 7.787725 ACGAGAAATTTTAACATAGGCCTAG 57.212 36.000 19.33 12.53 0.00 3.02
2783 6980 5.844516 ACATAGGCCTAGTCTATTTTAGCCA 59.155 40.000 19.33 0.00 26.81 4.75
2786 6983 4.287326 AGGCCTAGTCTATTTTAGCCATCC 59.713 45.833 1.29 0.00 0.00 3.51
2788 6985 5.241662 GCCTAGTCTATTTTAGCCATCCAG 58.758 45.833 0.00 0.00 0.00 3.86
2791 6988 7.093289 GCCTAGTCTATTTTAGCCATCCAGATA 60.093 40.741 0.00 0.00 0.00 1.98
2792 6989 8.816894 CCTAGTCTATTTTAGCCATCCAGATAA 58.183 37.037 0.00 0.00 0.00 1.75
2925 7274 8.908903 AGGCACCGACAAATAATATTCAAATAA 58.091 29.630 0.00 0.00 0.00 1.40
2956 7305 6.014669 AGCCAAATGTAAATTGCCTGAGTTTA 60.015 34.615 0.00 0.00 0.00 2.01
3037 7419 8.472007 TTTTATTCCTAGTGTTGTTTCATGGT 57.528 30.769 0.00 0.00 0.00 3.55
3041 7423 6.385649 TCCTAGTGTTGTTTCATGGTTTTC 57.614 37.500 0.00 0.00 0.00 2.29
3043 7425 6.262273 TCCTAGTGTTGTTTCATGGTTTTCTC 59.738 38.462 0.00 0.00 0.00 2.87
3200 7609 7.921786 TTGGGATGTAGAGTGATTGTAAAAG 57.078 36.000 0.00 0.00 0.00 2.27
3262 7671 6.052360 TGTATTAGAGTGTGAAAACTGCACA 58.948 36.000 0.00 0.00 43.41 4.57
3336 7745 7.665561 AAGTTGTGTGCAAGTTTTTGTTTAT 57.334 28.000 0.00 0.00 43.51 1.40
3338 7747 7.738345 AGTTGTGTGCAAGTTTTTGTTTATTC 58.262 30.769 0.00 0.00 34.84 1.75
3341 7750 8.988064 TGTGTGCAAGTTTTTGTTTATTCTTA 57.012 26.923 0.00 0.00 36.65 2.10
3368 7787 8.532186 AATGTAATACCAATGCCACTAATTCA 57.468 30.769 0.00 0.00 0.00 2.57
3377 7796 6.127253 CCAATGCCACTAATTCATTCTTCCTT 60.127 38.462 0.00 0.00 0.00 3.36
3380 7799 6.957631 TGCCACTAATTCATTCTTCCTTAGA 58.042 36.000 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.901844 TCTAAGTTAGCCAACACAGAGGT 59.098 43.478 4.93 0.00 37.10 3.85
3 4 4.246458 GTCTAAGTTAGCCAACACAGAGG 58.754 47.826 4.93 0.00 37.10 3.69
5 6 4.948341 TGTCTAAGTTAGCCAACACAGA 57.052 40.909 4.93 0.00 37.10 3.41
6 7 5.934625 AGATTGTCTAAGTTAGCCAACACAG 59.065 40.000 8.45 0.00 37.10 3.66
7 8 5.865085 AGATTGTCTAAGTTAGCCAACACA 58.135 37.500 8.45 3.28 37.10 3.72
8 9 5.932303 TGAGATTGTCTAAGTTAGCCAACAC 59.068 40.000 8.45 6.56 37.10 3.32
9 10 6.109156 TGAGATTGTCTAAGTTAGCCAACA 57.891 37.500 8.45 3.97 37.10 3.33
10 11 6.457528 GCATGAGATTGTCTAAGTTAGCCAAC 60.458 42.308 8.45 1.42 34.67 3.77
11 12 5.586243 GCATGAGATTGTCTAAGTTAGCCAA 59.414 40.000 8.69 8.69 0.00 4.52
12 13 5.118990 GCATGAGATTGTCTAAGTTAGCCA 58.881 41.667 4.93 0.00 0.00 4.75
13 14 4.210120 CGCATGAGATTGTCTAAGTTAGCC 59.790 45.833 4.93 0.00 0.00 3.93
14 15 4.806247 ACGCATGAGATTGTCTAAGTTAGC 59.194 41.667 2.50 1.70 0.00 3.09
15 16 6.036470 TCACGCATGAGATTGTCTAAGTTAG 58.964 40.000 2.50 3.29 0.00 2.34
16 17 5.961272 TCACGCATGAGATTGTCTAAGTTA 58.039 37.500 2.50 0.00 0.00 2.24
17 18 4.820897 TCACGCATGAGATTGTCTAAGTT 58.179 39.130 2.50 0.00 0.00 2.66
18 19 4.456280 TCACGCATGAGATTGTCTAAGT 57.544 40.909 2.50 0.00 0.00 2.24
30 31 1.005037 GGACACACCTCACGCATGA 60.005 57.895 0.00 0.00 35.41 3.07
31 32 2.382746 CGGACACACCTCACGCATG 61.383 63.158 0.00 0.00 36.31 4.06
32 33 2.048222 CGGACACACCTCACGCAT 60.048 61.111 0.00 0.00 36.31 4.73
33 34 4.293648 CCGGACACACCTCACGCA 62.294 66.667 0.00 0.00 36.31 5.24
34 35 2.922950 TACCGGACACACCTCACGC 61.923 63.158 9.46 0.00 36.31 5.34
35 36 1.080974 GTACCGGACACACCTCACG 60.081 63.158 9.46 0.00 36.31 4.35
36 37 0.390124 TTGTACCGGACACACCTCAC 59.610 55.000 9.46 0.00 37.96 3.51
37 38 1.344065 ATTGTACCGGACACACCTCA 58.656 50.000 9.46 0.00 37.96 3.86
38 39 3.131577 TCATATTGTACCGGACACACCTC 59.868 47.826 9.46 0.00 37.96 3.85
39 40 3.101437 TCATATTGTACCGGACACACCT 58.899 45.455 9.46 4.59 37.96 4.00
40 41 3.530265 TCATATTGTACCGGACACACC 57.470 47.619 9.46 0.00 37.96 4.16
41 42 4.506654 GTGATCATATTGTACCGGACACAC 59.493 45.833 9.46 7.13 37.96 3.82
42 43 4.442332 GGTGATCATATTGTACCGGACACA 60.442 45.833 9.46 9.28 37.96 3.72
43 44 4.056050 GGTGATCATATTGTACCGGACAC 58.944 47.826 9.46 6.19 37.96 3.67
44 45 3.964688 AGGTGATCATATTGTACCGGACA 59.035 43.478 9.46 5.40 36.55 4.02
45 46 4.281182 AGAGGTGATCATATTGTACCGGAC 59.719 45.833 9.46 2.18 36.55 4.79
46 47 4.280929 CAGAGGTGATCATATTGTACCGGA 59.719 45.833 9.46 0.00 36.55 5.14
47 48 4.039245 ACAGAGGTGATCATATTGTACCGG 59.961 45.833 0.00 0.00 36.55 5.28
48 49 5.201713 ACAGAGGTGATCATATTGTACCG 57.798 43.478 0.00 0.00 36.55 4.02
49 50 9.640963 GTAATACAGAGGTGATCATATTGTACC 57.359 37.037 0.00 0.00 0.00 3.34
50 51 9.640963 GGTAATACAGAGGTGATCATATTGTAC 57.359 37.037 0.00 0.00 0.00 2.90
51 52 9.374711 TGGTAATACAGAGGTGATCATATTGTA 57.625 33.333 0.00 6.72 0.00 2.41
52 53 8.262601 TGGTAATACAGAGGTGATCATATTGT 57.737 34.615 0.00 4.64 0.00 2.71
53 54 9.730705 AATGGTAATACAGAGGTGATCATATTG 57.269 33.333 0.00 0.00 0.00 1.90
80 81 9.070179 GTGAGGACCAATAGTAAAGGTTAAAAA 57.930 33.333 0.00 0.00 35.36 1.94
81 82 7.388500 CGTGAGGACCAATAGTAAAGGTTAAAA 59.612 37.037 0.00 0.00 35.36 1.52
82 83 6.875195 CGTGAGGACCAATAGTAAAGGTTAAA 59.125 38.462 0.00 0.00 35.36 1.52
83 84 6.211184 TCGTGAGGACCAATAGTAAAGGTTAA 59.789 38.462 0.00 0.00 35.36 2.01
84 85 5.716228 TCGTGAGGACCAATAGTAAAGGTTA 59.284 40.000 0.00 0.00 35.36 2.85
85 86 4.529377 TCGTGAGGACCAATAGTAAAGGTT 59.471 41.667 0.00 0.00 35.36 3.50
86 87 4.091549 TCGTGAGGACCAATAGTAAAGGT 58.908 43.478 0.00 0.00 38.63 3.50
87 88 4.730949 TCGTGAGGACCAATAGTAAAGG 57.269 45.455 0.00 0.00 0.00 3.11
88 89 5.721232 ACTTCGTGAGGACCAATAGTAAAG 58.279 41.667 0.00 0.00 0.00 1.85
89 90 5.733620 ACTTCGTGAGGACCAATAGTAAA 57.266 39.130 0.00 0.00 0.00 2.01
90 91 5.948162 AGTACTTCGTGAGGACCAATAGTAA 59.052 40.000 0.00 0.00 40.38 2.24
91 92 5.503927 AGTACTTCGTGAGGACCAATAGTA 58.496 41.667 0.00 0.00 40.38 1.82
92 93 4.342359 AGTACTTCGTGAGGACCAATAGT 58.658 43.478 0.00 0.00 40.38 2.12
93 94 4.202030 GGAGTACTTCGTGAGGACCAATAG 60.202 50.000 0.00 0.00 40.38 1.73
94 95 3.698040 GGAGTACTTCGTGAGGACCAATA 59.302 47.826 0.00 0.00 40.38 1.90
95 96 2.496470 GGAGTACTTCGTGAGGACCAAT 59.504 50.000 0.00 0.00 40.38 3.16
96 97 1.891150 GGAGTACTTCGTGAGGACCAA 59.109 52.381 0.00 0.00 40.38 3.67
97 98 1.542492 GGAGTACTTCGTGAGGACCA 58.458 55.000 0.00 0.00 40.38 4.02
98 99 0.816373 GGGAGTACTTCGTGAGGACC 59.184 60.000 0.00 0.00 40.38 4.46
99 100 1.744522 GAGGGAGTACTTCGTGAGGAC 59.255 57.143 0.00 0.00 39.74 3.85
100 101 1.340795 GGAGGGAGTACTTCGTGAGGA 60.341 57.143 0.00 0.00 0.00 3.71
101 102 1.104630 GGAGGGAGTACTTCGTGAGG 58.895 60.000 0.00 0.00 0.00 3.86
102 103 0.733729 CGGAGGGAGTACTTCGTGAG 59.266 60.000 0.00 0.00 34.78 3.51
103 104 2.864114 CGGAGGGAGTACTTCGTGA 58.136 57.895 0.00 0.00 34.78 4.35
106 107 0.455005 GGAACGGAGGGAGTACTTCG 59.545 60.000 0.00 0.00 44.95 3.79
107 108 1.849977 AGGAACGGAGGGAGTACTTC 58.150 55.000 0.00 0.00 0.00 3.01
108 109 3.463048 TTAGGAACGGAGGGAGTACTT 57.537 47.619 0.00 0.00 0.00 2.24
109 110 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
110 111 4.541973 TTTTTAGGAACGGAGGGAGTAC 57.458 45.455 0.00 0.00 0.00 2.73
111 112 6.872585 TTATTTTTAGGAACGGAGGGAGTA 57.127 37.500 0.00 0.00 0.00 2.59
112 113 5.767277 TTATTTTTAGGAACGGAGGGAGT 57.233 39.130 0.00 0.00 0.00 3.85
113 114 6.826741 TGATTTATTTTTAGGAACGGAGGGAG 59.173 38.462 0.00 0.00 0.00 4.30
114 115 6.723339 TGATTTATTTTTAGGAACGGAGGGA 58.277 36.000 0.00 0.00 0.00 4.20
115 116 7.582667 ATGATTTATTTTTAGGAACGGAGGG 57.417 36.000 0.00 0.00 0.00 4.30
136 137 9.310449 GTCTACCTAGTGAAATCCCTATAATGA 57.690 37.037 0.00 0.00 0.00 2.57
137 138 9.315363 AGTCTACCTAGTGAAATCCCTATAATG 57.685 37.037 0.00 0.00 0.00 1.90
139 140 9.804977 GTAGTCTACCTAGTGAAATCCCTATAA 57.195 37.037 0.00 0.00 0.00 0.98
140 141 8.952602 TGTAGTCTACCTAGTGAAATCCCTATA 58.047 37.037 7.56 0.00 0.00 1.31
141 142 7.823635 TGTAGTCTACCTAGTGAAATCCCTAT 58.176 38.462 7.56 0.00 0.00 2.57
142 143 7.217028 TGTAGTCTACCTAGTGAAATCCCTA 57.783 40.000 7.56 0.00 0.00 3.53
143 144 6.088541 TGTAGTCTACCTAGTGAAATCCCT 57.911 41.667 7.56 0.00 0.00 4.20
144 145 6.980416 ATGTAGTCTACCTAGTGAAATCCC 57.020 41.667 7.56 0.00 0.00 3.85
145 146 7.443575 TCGTATGTAGTCTACCTAGTGAAATCC 59.556 40.741 7.56 0.00 0.00 3.01
146 147 8.375608 TCGTATGTAGTCTACCTAGTGAAATC 57.624 38.462 7.56 0.00 0.00 2.17
147 148 8.743085 TTCGTATGTAGTCTACCTAGTGAAAT 57.257 34.615 7.56 0.00 0.00 2.17
148 149 7.201679 GCTTCGTATGTAGTCTACCTAGTGAAA 60.202 40.741 7.56 0.00 0.00 2.69
149 150 6.259608 GCTTCGTATGTAGTCTACCTAGTGAA 59.740 42.308 7.56 8.11 0.00 3.18
150 151 5.757320 GCTTCGTATGTAGTCTACCTAGTGA 59.243 44.000 7.56 1.42 0.00 3.41
151 152 5.526479 TGCTTCGTATGTAGTCTACCTAGTG 59.474 44.000 7.56 0.00 0.00 2.74
152 153 5.678583 TGCTTCGTATGTAGTCTACCTAGT 58.321 41.667 7.56 0.00 0.00 2.57
153 154 6.615264 TTGCTTCGTATGTAGTCTACCTAG 57.385 41.667 7.56 0.00 0.00 3.02
154 155 7.395190 TTTTGCTTCGTATGTAGTCTACCTA 57.605 36.000 7.56 0.00 0.00 3.08
155 156 5.909621 TTTGCTTCGTATGTAGTCTACCT 57.090 39.130 7.56 0.35 0.00 3.08
156 157 6.018994 CCATTTTGCTTCGTATGTAGTCTACC 60.019 42.308 7.56 0.00 0.00 3.18
157 158 6.755141 TCCATTTTGCTTCGTATGTAGTCTAC 59.245 38.462 2.81 2.81 0.00 2.59
158 159 6.869695 TCCATTTTGCTTCGTATGTAGTCTA 58.130 36.000 0.00 0.00 0.00 2.59
159 160 5.730550 TCCATTTTGCTTCGTATGTAGTCT 58.269 37.500 0.00 0.00 0.00 3.24
160 161 6.257849 TCATCCATTTTGCTTCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
161 162 6.112734 TCATCCATTTTGCTTCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
162 163 6.603237 TCATCCATTTTGCTTCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
163 164 6.993786 TTCATCCATTTTGCTTCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
164 165 5.895636 TTCATCCATTTTGCTTCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
165 166 6.732154 AGATTCATCCATTTTGCTTCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
166 167 6.949352 AGATTCATCCATTTTGCTTCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
167 168 8.988934 GTATAGATTCATCCATTTTGCTTCGTA 58.011 33.333 0.00 0.00 0.00 3.43
168 169 6.949352 ATAGATTCATCCATTTTGCTTCGT 57.051 33.333 0.00 0.00 0.00 3.85
169 170 8.092521 AGTATAGATTCATCCATTTTGCTTCG 57.907 34.615 0.00 0.00 0.00 3.79
192 193 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
196 197 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
197 198 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
198 199 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
199 200 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
200 201 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
201 202 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
202 203 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
203 204 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
204 205 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
207 208 9.599866 CATTATGAACCACATACGGATGTATAT 57.400 33.333 14.23 1.68 44.82 0.86
208 209 8.808092 TCATTATGAACCACATACGGATGTATA 58.192 33.333 14.23 4.47 44.82 1.47
209 210 7.676004 TCATTATGAACCACATACGGATGTAT 58.324 34.615 14.23 5.54 44.82 2.29
210 211 7.056844 TCATTATGAACCACATACGGATGTA 57.943 36.000 14.23 0.00 44.82 2.29
211 212 6.353323 TTCATTATGAACCACATACGGATGT 58.647 36.000 7.68 7.68 40.62 3.06
212 213 6.859420 TTCATTATGAACCACATACGGATG 57.141 37.500 5.94 5.94 40.62 3.51
213 214 7.939039 AGATTTCATTATGAACCACATACGGAT 59.061 33.333 7.19 0.00 40.62 4.18
214 215 7.279615 AGATTTCATTATGAACCACATACGGA 58.720 34.615 7.19 0.00 40.62 4.69
215 216 7.442364 AGAGATTTCATTATGAACCACATACGG 59.558 37.037 7.19 0.00 40.62 4.02
216 217 8.370493 AGAGATTTCATTATGAACCACATACG 57.630 34.615 7.19 0.00 40.62 3.06
219 220 9.685276 TTGTAGAGATTTCATTATGAACCACAT 57.315 29.630 7.19 0.00 35.89 3.21
220 221 9.513906 TTTGTAGAGATTTCATTATGAACCACA 57.486 29.630 7.19 0.00 35.89 4.17
221 222 9.994432 CTTTGTAGAGATTTCATTATGAACCAC 57.006 33.333 7.19 2.67 35.89 4.16
222 223 9.958180 TCTTTGTAGAGATTTCATTATGAACCA 57.042 29.630 7.19 0.00 35.89 3.67
242 243 9.379791 CCTCCGTTTCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
243 244 8.827677 CCCTCCGTTTCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
244 245 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
245 246 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
246 247 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
247 248 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
248 249 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
252 253 9.377238 AGTAATACTCCCTCCGTTTCTAAATAT 57.623 33.333 0.00 0.00 0.00 1.28
253 254 8.773033 AGTAATACTCCCTCCGTTTCTAAATA 57.227 34.615 0.00 0.00 0.00 1.40
254 255 7.672122 AGTAATACTCCCTCCGTTTCTAAAT 57.328 36.000 0.00 0.00 0.00 1.40
255 256 7.486407 AAGTAATACTCCCTCCGTTTCTAAA 57.514 36.000 0.00 0.00 0.00 1.85
256 257 7.486407 AAAGTAATACTCCCTCCGTTTCTAA 57.514 36.000 0.00 0.00 0.00 2.10
257 258 7.398332 AGAAAAGTAATACTCCCTCCGTTTCTA 59.602 37.037 10.52 0.00 28.99 2.10
258 259 6.212993 AGAAAAGTAATACTCCCTCCGTTTCT 59.787 38.462 7.71 7.71 0.00 2.52
259 260 6.404708 AGAAAAGTAATACTCCCTCCGTTTC 58.595 40.000 0.00 0.00 0.00 2.78
260 261 6.013984 TGAGAAAAGTAATACTCCCTCCGTTT 60.014 38.462 11.40 0.83 0.00 3.60
261 262 5.482878 TGAGAAAAGTAATACTCCCTCCGTT 59.517 40.000 11.40 0.00 0.00 4.44
262 263 5.021458 TGAGAAAAGTAATACTCCCTCCGT 58.979 41.667 11.40 0.00 0.00 4.69
263 264 5.593679 TGAGAAAAGTAATACTCCCTCCG 57.406 43.478 11.40 0.00 0.00 4.63
264 265 6.993308 GGAATGAGAAAAGTAATACTCCCTCC 59.007 42.308 11.40 0.00 0.00 4.30
265 266 7.797062 AGGAATGAGAAAAGTAATACTCCCTC 58.203 38.462 0.00 2.13 0.00 4.30
266 267 7.147461 GGAGGAATGAGAAAAGTAATACTCCCT 60.147 40.741 0.00 0.00 34.92 4.20
267 268 6.993308 GGAGGAATGAGAAAAGTAATACTCCC 59.007 42.308 0.00 0.00 34.92 4.30
268 269 7.797062 AGGAGGAATGAGAAAAGTAATACTCC 58.203 38.462 0.00 0.00 39.80 3.85
269 270 7.929245 GGAGGAGGAATGAGAAAAGTAATACTC 59.071 40.741 0.00 0.00 0.00 2.59
298 299 0.972471 TCGGCATGAGAGGCAAGAGA 60.972 55.000 0.00 0.00 0.00 3.10
301 302 0.883814 GGATCGGCATGAGAGGCAAG 60.884 60.000 0.00 0.00 0.00 4.01
307 308 0.465705 GAGGTTGGATCGGCATGAGA 59.534 55.000 0.00 0.00 0.00 3.27
311 319 2.505819 AGTTTAGAGGTTGGATCGGCAT 59.494 45.455 0.00 0.00 0.00 4.40
313 321 2.693267 AGTTTAGAGGTTGGATCGGC 57.307 50.000 0.00 0.00 0.00 5.54
318 326 5.046807 GTGGCTTACTAGTTTAGAGGTTGGA 60.047 44.000 0.00 0.00 0.00 3.53
329 337 4.111375 CACATCGAGTGGCTTACTAGTT 57.889 45.455 0.00 0.00 44.69 2.24
349 357 2.265739 GGATGTGGCGAGTGAGCA 59.734 61.111 0.00 0.00 39.27 4.26
368 376 2.158871 AGGTGTTACAACGGAGAAGCAA 60.159 45.455 0.00 0.00 0.00 3.91
372 380 2.224113 GGTGAGGTGTTACAACGGAGAA 60.224 50.000 0.00 0.00 0.00 2.87
378 386 1.202557 TCCACGGTGAGGTGTTACAAC 60.203 52.381 10.28 0.00 36.16 3.32
379 387 1.069513 CTCCACGGTGAGGTGTTACAA 59.930 52.381 10.28 0.00 36.16 2.41
386 394 0.826715 CATCATCTCCACGGTGAGGT 59.173 55.000 10.28 0.00 33.04 3.85
418 426 4.329545 TGCTCGTGCTCCCCAACC 62.330 66.667 11.19 0.00 40.48 3.77
448 456 2.668632 CCACCCTTTGCCGCTCTA 59.331 61.111 0.00 0.00 0.00 2.43
454 462 0.753111 CATCTAGCCCACCCTTTGCC 60.753 60.000 0.00 0.00 0.00 4.52
474 482 4.364686 TTCCACTCCCCCTCCCCC 62.365 72.222 0.00 0.00 0.00 5.40
475 483 2.692741 CTTCCACTCCCCCTCCCC 60.693 72.222 0.00 0.00 0.00 4.81
476 484 2.692741 CCTTCCACTCCCCCTCCC 60.693 72.222 0.00 0.00 0.00 4.30
477 485 2.692741 CCCTTCCACTCCCCCTCC 60.693 72.222 0.00 0.00 0.00 4.30
478 486 2.125225 ACCCTTCCACTCCCCCTC 59.875 66.667 0.00 0.00 0.00 4.30
479 487 2.204151 CACCCTTCCACTCCCCCT 60.204 66.667 0.00 0.00 0.00 4.79
480 488 2.531942 ACACCCTTCCACTCCCCC 60.532 66.667 0.00 0.00 0.00 5.40
481 489 2.955881 CGACACCCTTCCACTCCCC 61.956 68.421 0.00 0.00 0.00 4.81
482 490 2.663196 CGACACCCTTCCACTCCC 59.337 66.667 0.00 0.00 0.00 4.30
483 491 2.663196 CCGACACCCTTCCACTCC 59.337 66.667 0.00 0.00 0.00 3.85
484 492 2.047179 GCCGACACCCTTCCACTC 60.047 66.667 0.00 0.00 0.00 3.51
485 493 4.003788 CGCCGACACCCTTCCACT 62.004 66.667 0.00 0.00 0.00 4.00
502 510 3.635268 CTCCCTGACCTTGCCCAGC 62.635 68.421 0.00 0.00 0.00 4.85
503 511 2.673523 CTCCCTGACCTTGCCCAG 59.326 66.667 0.00 0.00 0.00 4.45
504 512 2.935481 CCTCCCTGACCTTGCCCA 60.935 66.667 0.00 0.00 0.00 5.36
505 513 4.432741 GCCTCCCTGACCTTGCCC 62.433 72.222 0.00 0.00 0.00 5.36
506 514 4.432741 GGCCTCCCTGACCTTGCC 62.433 72.222 0.00 0.00 0.00 4.52
507 515 4.785453 CGGCCTCCCTGACCTTGC 62.785 72.222 0.00 0.00 0.00 4.01
508 516 4.785453 GCGGCCTCCCTGACCTTG 62.785 72.222 0.00 0.00 0.00 3.61
529 537 4.873129 CACATCTCGACCCGCCCG 62.873 72.222 0.00 0.00 0.00 6.13
530 538 4.530857 CCACATCTCGACCCGCCC 62.531 72.222 0.00 0.00 0.00 6.13
531 539 2.797278 ATCCACATCTCGACCCGCC 61.797 63.158 0.00 0.00 0.00 6.13
532 540 1.592669 CATCCACATCTCGACCCGC 60.593 63.158 0.00 0.00 0.00 6.13
533 541 1.592669 GCATCCACATCTCGACCCG 60.593 63.158 0.00 0.00 0.00 5.28
534 542 1.592669 CGCATCCACATCTCGACCC 60.593 63.158 0.00 0.00 0.00 4.46
535 543 0.460284 AACGCATCCACATCTCGACC 60.460 55.000 0.00 0.00 0.00 4.79
536 544 1.359848 AAACGCATCCACATCTCGAC 58.640 50.000 0.00 0.00 0.00 4.20
537 545 2.093306 AAAACGCATCCACATCTCGA 57.907 45.000 0.00 0.00 0.00 4.04
538 546 2.900122 AAAAACGCATCCACATCTCG 57.100 45.000 0.00 0.00 0.00 4.04
612 937 2.819608 CCGAACACCAAGTGGAAATGAT 59.180 45.455 3.83 0.00 37.94 2.45
632 957 0.846693 ATCAGGCCTAATGACCCACC 59.153 55.000 3.98 0.00 0.00 4.61
673 1000 7.148407 CGGATGTTTCATCTTTGCTAAAGTACT 60.148 37.037 9.16 0.00 39.52 2.73
786 1113 0.820871 AAGTGGGAGATCGACAGAGC 59.179 55.000 0.00 0.00 0.00 4.09
791 1118 4.766375 TGGAAATAAAGTGGGAGATCGAC 58.234 43.478 0.00 0.00 0.00 4.20
792 1119 5.428253 CTTGGAAATAAAGTGGGAGATCGA 58.572 41.667 0.00 0.00 0.00 3.59
793 1120 4.035675 GCTTGGAAATAAAGTGGGAGATCG 59.964 45.833 0.00 0.00 0.00 3.69
836 1163 6.365839 CACAAGTGCGCCTATATAAAATGAG 58.634 40.000 4.18 0.00 0.00 2.90
951 1278 3.861263 GGGACGATGGCGCGAAAC 61.861 66.667 12.10 0.00 42.48 2.78
984 1314 4.732355 GCTTCCATCGTACTCTCTGAAGTC 60.732 50.000 0.00 0.00 32.41 3.01
985 1315 3.129638 GCTTCCATCGTACTCTCTGAAGT 59.870 47.826 0.00 0.00 32.41 3.01
986 1316 3.129462 TGCTTCCATCGTACTCTCTGAAG 59.871 47.826 0.00 0.00 0.00 3.02
987 1317 3.089284 TGCTTCCATCGTACTCTCTGAA 58.911 45.455 0.00 0.00 0.00 3.02
988 1318 2.685388 CTGCTTCCATCGTACTCTCTGA 59.315 50.000 0.00 0.00 0.00 3.27
989 1319 2.797792 GCTGCTTCCATCGTACTCTCTG 60.798 54.545 0.00 0.00 0.00 3.35
1669 4891 2.109181 GCTCCGGTAGATGGCCAC 59.891 66.667 8.16 1.58 0.00 5.01
1748 4971 3.696518 TAGCAGGATCCCGGCAGGT 62.697 63.158 23.60 10.98 46.75 4.00
2464 5802 6.582295 CAGGTTGTTTAAACGAAATCCATCAG 59.418 38.462 9.91 0.00 0.00 2.90
2467 5805 5.303333 ACCAGGTTGTTTAAACGAAATCCAT 59.697 36.000 9.91 0.00 0.00 3.41
2502 5840 3.181491 CCACATACCGGATTCGCATTTTT 60.181 43.478 9.46 0.00 34.56 1.94
2504 5842 1.946768 CCACATACCGGATTCGCATTT 59.053 47.619 9.46 0.00 34.56 2.32
2515 5972 9.175312 AGAGTATACATAGTATTCCACATACCG 57.825 37.037 5.50 0.00 0.00 4.02
2521 5978 6.351117 GCCCCAGAGTATACATAGTATTCCAC 60.351 46.154 5.50 0.00 0.00 4.02
2523 5980 5.958987 AGCCCCAGAGTATACATAGTATTCC 59.041 44.000 5.50 0.00 0.00 3.01
2525 5982 6.323737 ACAGCCCCAGAGTATACATAGTATT 58.676 40.000 5.50 0.00 0.00 1.89
2527 5984 5.335028 ACAGCCCCAGAGTATACATAGTA 57.665 43.478 5.50 0.00 0.00 1.82
2528 5985 4.200447 ACAGCCCCAGAGTATACATAGT 57.800 45.455 5.50 0.00 0.00 2.12
2529 5986 4.321304 CGAACAGCCCCAGAGTATACATAG 60.321 50.000 5.50 0.00 0.00 2.23
2533 5990 1.068741 CCGAACAGCCCCAGAGTATAC 59.931 57.143 0.00 0.00 0.00 1.47
2535 5992 0.325296 TCCGAACAGCCCCAGAGTAT 60.325 55.000 0.00 0.00 0.00 2.12
2536 5993 0.543410 TTCCGAACAGCCCCAGAGTA 60.543 55.000 0.00 0.00 0.00 2.59
2538 5995 0.955919 GTTTCCGAACAGCCCCAGAG 60.956 60.000 0.00 0.00 35.79 3.35
2539 5996 1.072505 GTTTCCGAACAGCCCCAGA 59.927 57.895 0.00 0.00 35.79 3.86
2540 5997 1.971695 GGTTTCCGAACAGCCCCAG 60.972 63.158 0.00 0.00 37.51 4.45
2543 6000 2.265904 GGTGGTTTCCGAACAGCCC 61.266 63.158 0.00 0.00 37.51 5.19
2544 6001 2.265904 GGGTGGTTTCCGAACAGCC 61.266 63.158 4.69 4.69 37.51 4.85
2545 6002 3.351450 GGGTGGTTTCCGAACAGC 58.649 61.111 0.00 0.00 37.51 4.40
2552 6009 2.359975 CTGGAGCGGGTGGTTTCC 60.360 66.667 0.00 0.00 0.00 3.13
2554 6011 0.112412 ATTTCTGGAGCGGGTGGTTT 59.888 50.000 0.00 0.00 0.00 3.27
2556 6013 1.299976 GATTTCTGGAGCGGGTGGT 59.700 57.895 0.00 0.00 0.00 4.16
2557 6014 1.026718 GTGATTTCTGGAGCGGGTGG 61.027 60.000 0.00 0.00 0.00 4.61
2558 6015 0.321564 TGTGATTTCTGGAGCGGGTG 60.322 55.000 0.00 0.00 0.00 4.61
2560 6017 0.250234 TCTGTGATTTCTGGAGCGGG 59.750 55.000 0.00 0.00 0.00 6.13
2562 6019 2.611292 GGATTCTGTGATTTCTGGAGCG 59.389 50.000 0.00 0.00 0.00 5.03
2563 6020 3.376546 GTGGATTCTGTGATTTCTGGAGC 59.623 47.826 0.00 0.00 0.00 4.70
2565 6022 3.599343 CGTGGATTCTGTGATTTCTGGA 58.401 45.455 0.00 0.00 0.00 3.86
2566 6023 2.679837 CCGTGGATTCTGTGATTTCTGG 59.320 50.000 0.00 0.00 0.00 3.86
2567 6024 3.599343 TCCGTGGATTCTGTGATTTCTG 58.401 45.455 0.00 0.00 0.00 3.02
2569 6026 3.600388 ACTCCGTGGATTCTGTGATTTC 58.400 45.455 0.00 0.00 0.00 2.17
2572 6029 2.431057 GGTACTCCGTGGATTCTGTGAT 59.569 50.000 0.00 0.00 0.00 3.06
2574 6031 1.548719 TGGTACTCCGTGGATTCTGTG 59.451 52.381 0.00 0.00 36.30 3.66
2575 6032 1.933021 TGGTACTCCGTGGATTCTGT 58.067 50.000 0.00 0.00 36.30 3.41
2576 6033 3.543680 ATTGGTACTCCGTGGATTCTG 57.456 47.619 0.00 0.00 36.30 3.02
2577 6034 4.514401 GAAATTGGTACTCCGTGGATTCT 58.486 43.478 0.00 0.00 36.30 2.40
2578 6035 3.626217 GGAAATTGGTACTCCGTGGATTC 59.374 47.826 0.00 0.00 36.30 2.52
2579 6036 3.265995 AGGAAATTGGTACTCCGTGGATT 59.734 43.478 0.00 0.00 36.30 3.01
2580 6037 2.844348 AGGAAATTGGTACTCCGTGGAT 59.156 45.455 0.00 0.00 36.30 3.41
2582 6039 2.629051 GAGGAAATTGGTACTCCGTGG 58.371 52.381 0.00 0.00 36.30 4.94
2585 6042 1.134788 AGCGAGGAAATTGGTACTCCG 60.135 52.381 0.00 0.00 36.30 4.63
2586 6043 2.552031 GAGCGAGGAAATTGGTACTCC 58.448 52.381 0.00 0.00 0.00 3.85
2587 6044 2.194271 CGAGCGAGGAAATTGGTACTC 58.806 52.381 0.00 0.00 0.00 2.59
2588 6045 1.134788 CCGAGCGAGGAAATTGGTACT 60.135 52.381 0.00 0.00 0.00 2.73
2589 6046 1.287425 CCGAGCGAGGAAATTGGTAC 58.713 55.000 0.00 0.00 0.00 3.34
2590 6047 0.461339 GCCGAGCGAGGAAATTGGTA 60.461 55.000 4.64 0.00 0.00 3.25
2591 6048 1.745489 GCCGAGCGAGGAAATTGGT 60.745 57.895 4.64 0.00 0.00 3.67
2592 6049 1.450312 AGCCGAGCGAGGAAATTGG 60.450 57.895 4.64 0.00 0.00 3.16
2593 6050 1.021390 ACAGCCGAGCGAGGAAATTG 61.021 55.000 4.64 0.35 0.00 2.32
2594 6051 0.321653 AACAGCCGAGCGAGGAAATT 60.322 50.000 4.64 0.00 0.00 1.82
2595 6052 0.741221 GAACAGCCGAGCGAGGAAAT 60.741 55.000 4.64 0.00 0.00 2.17
2596 6053 1.374252 GAACAGCCGAGCGAGGAAA 60.374 57.895 4.64 0.00 0.00 3.13
2598 6055 0.963856 TTAGAACAGCCGAGCGAGGA 60.964 55.000 4.64 0.00 0.00 3.71
2599 6056 0.108804 TTTAGAACAGCCGAGCGAGG 60.109 55.000 0.00 0.00 0.00 4.63
2600 6057 0.992802 GTTTAGAACAGCCGAGCGAG 59.007 55.000 0.00 0.00 0.00 5.03
2602 6059 0.716108 CAGTTTAGAACAGCCGAGCG 59.284 55.000 0.00 0.00 0.00 5.03
2603 6060 0.444260 GCAGTTTAGAACAGCCGAGC 59.556 55.000 0.00 0.00 37.88 5.03
2605 6062 1.795768 CTGCAGTTTAGAACAGCCGA 58.204 50.000 5.25 0.00 42.51 5.54
2609 6066 1.195448 CGGTGCTGCAGTTTAGAACAG 59.805 52.381 16.64 2.12 0.00 3.16
2610 6067 1.225855 CGGTGCTGCAGTTTAGAACA 58.774 50.000 16.64 0.00 0.00 3.18
2611 6068 0.517316 CCGGTGCTGCAGTTTAGAAC 59.483 55.000 16.64 4.62 0.00 3.01
2612 6069 1.234615 GCCGGTGCTGCAGTTTAGAA 61.235 55.000 16.64 0.00 33.53 2.10
2613 6070 1.671054 GCCGGTGCTGCAGTTTAGA 60.671 57.895 16.64 0.00 33.53 2.10
2614 6071 2.870372 GCCGGTGCTGCAGTTTAG 59.130 61.111 16.64 5.05 33.53 1.85
2625 6082 2.435586 CTCCAGAAGCAGCCGGTG 60.436 66.667 1.90 0.89 0.00 4.94
2626 6083 2.925170 ACTCCAGAAGCAGCCGGT 60.925 61.111 1.90 0.00 0.00 5.28
2627 6084 2.435586 CACTCCAGAAGCAGCCGG 60.436 66.667 0.00 0.00 0.00 6.13
2628 6085 2.435586 CCACTCCAGAAGCAGCCG 60.436 66.667 0.00 0.00 0.00 5.52
2629 6086 2.045536 CCCACTCCAGAAGCAGCC 60.046 66.667 0.00 0.00 0.00 4.85
2630 6087 1.376553 GACCCACTCCAGAAGCAGC 60.377 63.158 0.00 0.00 0.00 5.25
2631 6088 1.197430 AGGACCCACTCCAGAAGCAG 61.197 60.000 0.00 0.00 42.46 4.24
2632 6089 1.152030 AGGACCCACTCCAGAAGCA 60.152 57.895 0.00 0.00 42.46 3.91
2633 6090 1.298014 CAGGACCCACTCCAGAAGC 59.702 63.158 0.00 0.00 42.46 3.86
2636 6093 1.536418 CCACAGGACCCACTCCAGA 60.536 63.158 0.00 0.00 42.46 3.86
2637 6094 2.596851 CCCACAGGACCCACTCCAG 61.597 68.421 0.00 0.00 42.46 3.86
2638 6095 2.529136 CCCACAGGACCCACTCCA 60.529 66.667 0.00 0.00 42.46 3.86
2640 6097 2.529389 ACCCCACAGGACCCACTC 60.529 66.667 0.00 0.00 39.89 3.51
2641 6098 2.854032 CACCCCACAGGACCCACT 60.854 66.667 0.00 0.00 39.89 4.00
2642 6099 3.966543 CCACCCCACAGGACCCAC 61.967 72.222 0.00 0.00 39.89 4.61
2644 6101 3.330720 CTCCACCCCACAGGACCC 61.331 72.222 0.00 0.00 39.89 4.46
2645 6102 3.330720 CCTCCACCCCACAGGACC 61.331 72.222 0.00 0.00 39.89 4.46
2646 6103 3.330720 CCCTCCACCCCACAGGAC 61.331 72.222 0.00 0.00 39.89 3.85
2647 6104 3.537506 TCCCTCCACCCCACAGGA 61.538 66.667 0.00 0.00 39.89 3.86
2648 6105 3.330720 GTCCCTCCACCCCACAGG 61.331 72.222 0.00 0.00 43.78 4.00
2649 6106 2.203998 AGTCCCTCCACCCCACAG 60.204 66.667 0.00 0.00 0.00 3.66
2650 6107 2.203938 GAGTCCCTCCACCCCACA 60.204 66.667 0.00 0.00 0.00 4.17
2659 6116 1.605971 GGGTCTGTTCGGAGTCCCTC 61.606 65.000 2.80 0.00 38.07 4.30
2660 6117 1.609794 GGGTCTGTTCGGAGTCCCT 60.610 63.158 2.80 0.00 38.07 4.20
2661 6118 1.192803 AAGGGTCTGTTCGGAGTCCC 61.193 60.000 2.80 0.00 40.58 4.46
2662 6119 0.685660 AAAGGGTCTGTTCGGAGTCC 59.314 55.000 0.00 0.00 0.00 3.85
2663 6120 1.070289 ACAAAGGGTCTGTTCGGAGTC 59.930 52.381 0.00 0.00 0.00 3.36
2665 6122 3.056107 TCATACAAAGGGTCTGTTCGGAG 60.056 47.826 0.00 0.00 0.00 4.63
2666 6123 2.901192 TCATACAAAGGGTCTGTTCGGA 59.099 45.455 0.00 0.00 0.00 4.55
2667 6124 3.328382 TCATACAAAGGGTCTGTTCGG 57.672 47.619 0.00 0.00 0.00 4.30
2668 6125 3.122948 CGTTCATACAAAGGGTCTGTTCG 59.877 47.826 0.00 0.00 0.00 3.95
2669 6126 4.151867 GTCGTTCATACAAAGGGTCTGTTC 59.848 45.833 0.00 0.00 0.00 3.18
2670 6127 4.062991 GTCGTTCATACAAAGGGTCTGTT 58.937 43.478 0.00 0.00 0.00 3.16
2671 6128 3.070446 TGTCGTTCATACAAAGGGTCTGT 59.930 43.478 0.00 0.00 0.00 3.41
2672 6129 3.659786 TGTCGTTCATACAAAGGGTCTG 58.340 45.455 0.00 0.00 0.00 3.51
2673 6130 3.323979 ACTGTCGTTCATACAAAGGGTCT 59.676 43.478 0.00 0.00 0.00 3.85
2674 6131 3.432252 CACTGTCGTTCATACAAAGGGTC 59.568 47.826 0.00 0.00 0.00 4.46
2676 6133 3.186409 CACACTGTCGTTCATACAAAGGG 59.814 47.826 0.00 0.00 0.00 3.95
2677 6134 4.055360 TCACACTGTCGTTCATACAAAGG 58.945 43.478 0.00 0.00 0.00 3.11
2689 6884 6.287107 AGTTTTCACTATTTCACACTGTCG 57.713 37.500 0.00 0.00 0.00 4.35
2692 6887 8.773645 TCACATAGTTTTCACTATTTCACACTG 58.226 33.333 0.00 0.00 42.73 3.66
2765 6962 5.012148 TCTGGATGGCTAAAATAGACTAGGC 59.988 44.000 0.00 0.00 40.25 3.93
2800 6997 7.108841 ACTAATAAATCGTACAGCTCTTGGA 57.891 36.000 0.00 0.00 0.00 3.53
2806 7003 8.235359 AGAAGGTACTAATAAATCGTACAGCT 57.765 34.615 0.00 0.00 38.49 4.24
2887 7236 1.921869 CGGTGCCTTTCCAGGGGTAT 61.922 60.000 0.00 0.00 41.21 2.73
2889 7238 3.966543 CGGTGCCTTTCCAGGGGT 61.967 66.667 0.00 0.00 41.21 4.95
3056 7439 4.069312 TGACTGGTCCAAGGGATAAGTA 57.931 45.455 0.00 0.00 32.75 2.24
3070 7453 5.086621 AGCCCAATAGAAAAATTGACTGGT 58.913 37.500 0.00 0.00 38.84 4.00
3126 7510 5.354792 AGAACAAAGCAAAACACATGCAAAT 59.645 32.000 0.00 0.00 46.22 2.32
3185 7594 8.812972 TGAGTGTATACCTTTTACAATCACTCT 58.187 33.333 17.83 0.00 44.81 3.24
3242 7651 6.449635 AATTGTGCAGTTTTCACACTCTAA 57.550 33.333 0.00 0.00 43.32 2.10
3256 7665 8.697067 GCAAAGAATAAGCATATAATTGTGCAG 58.303 33.333 12.72 0.00 42.00 4.41
3335 7744 9.816354 GTGGCATTGGTATTACATTTTAAGAAT 57.184 29.630 0.00 0.00 0.00 2.40
3336 7745 9.030452 AGTGGCATTGGTATTACATTTTAAGAA 57.970 29.630 0.00 0.00 0.00 2.52
3341 7750 9.816354 GAATTAGTGGCATTGGTATTACATTTT 57.184 29.630 0.00 0.00 0.00 1.82
3351 7770 5.127682 GGAAGAATGAATTAGTGGCATTGGT 59.872 40.000 0.00 0.00 32.80 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.