Multiple sequence alignment - TraesCS5D01G450800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G450800 chr5D 100.000 2702 0 0 1 2702 499227838 499225137 0.000000e+00 4990
1 TraesCS5D01G450800 chr5B 93.382 1904 80 24 822 2702 619855629 619853749 0.000000e+00 2776
2 TraesCS5D01G450800 chr5B 90.149 335 17 7 461 791 619856026 619855704 3.220000e-114 422
3 TraesCS5D01G450800 chr5B 85.106 188 28 0 40 227 149263285 149263098 2.750000e-45 193
4 TraesCS5D01G450800 chr5A 90.118 2206 120 43 529 2702 623494098 623491959 0.000000e+00 2776
5 TraesCS5D01G450800 chr5A 86.740 181 24 0 47 227 22722346 22722526 4.560000e-48 202
6 TraesCS5D01G450800 chr4D 88.043 184 22 0 44 227 83274912 83274729 4.530000e-53 219
7 TraesCS5D01G450800 chr6B 85.789 190 21 6 41 227 203276557 203276371 2.120000e-46 196
8 TraesCS5D01G450800 chr2D 83.744 203 31 2 25 227 35257430 35257630 9.870000e-45 191
9 TraesCS5D01G450800 chr2D 82.464 211 35 2 25 235 472144746 472144538 1.650000e-42 183
10 TraesCS5D01G450800 chr1D 83.744 203 31 2 25 227 352189140 352188940 9.870000e-45 191
11 TraesCS5D01G450800 chr6D 83.251 203 32 2 25 227 107936723 107936523 4.590000e-43 185
12 TraesCS5D01G450800 chr3D 83.010 206 33 2 25 230 339453316 339453113 4.590000e-43 185


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G450800 chr5D 499225137 499227838 2701 True 4990 4990 100.0000 1 2702 1 chr5D.!!$R1 2701
1 TraesCS5D01G450800 chr5B 619853749 619856026 2277 True 1599 2776 91.7655 461 2702 2 chr5B.!!$R2 2241
2 TraesCS5D01G450800 chr5A 623491959 623494098 2139 True 2776 2776 90.1180 529 2702 1 chr5A.!!$R1 2173

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.030101 ATGCACGTTTGTTTGGGTCG 59.970 50.0 0.0 0.0 0.0 4.79 F
267 268 0.034896 GTGGTGAGGATGACGGTTGT 59.965 55.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1656 1744 0.257039 AGGTGCTCCCCATGAATGAC 59.743 55.000 0.00 0.0 0.00 3.06 R
1872 1961 1.949525 CTTGAACACCAAGTGGACTGG 59.050 52.381 3.83 0.0 45.52 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.371063 GCTGTCGACGGAGGTGGA 61.371 66.667 28.38 0.00 0.00 4.02
18 19 2.927580 GCTGTCGACGGAGGTGGAA 61.928 63.158 28.38 0.00 32.42 3.53
19 20 1.213013 CTGTCGACGGAGGTGGAAG 59.787 63.158 20.01 0.00 32.42 3.46
20 21 1.228337 TGTCGACGGAGGTGGAAGA 60.228 57.895 11.62 0.00 32.42 2.87
21 22 1.241990 TGTCGACGGAGGTGGAAGAG 61.242 60.000 11.62 0.00 32.42 2.85
22 23 1.677966 TCGACGGAGGTGGAAGAGG 60.678 63.158 0.00 0.00 0.00 3.69
23 24 2.711922 CGACGGAGGTGGAAGAGGG 61.712 68.421 0.00 0.00 0.00 4.30
24 25 1.305046 GACGGAGGTGGAAGAGGGA 60.305 63.158 0.00 0.00 0.00 4.20
25 26 1.305381 ACGGAGGTGGAAGAGGGAG 60.305 63.158 0.00 0.00 0.00 4.30
26 27 2.060980 CGGAGGTGGAAGAGGGAGG 61.061 68.421 0.00 0.00 0.00 4.30
27 28 1.392534 GGAGGTGGAAGAGGGAGGA 59.607 63.158 0.00 0.00 0.00 3.71
28 29 0.689412 GGAGGTGGAAGAGGGAGGAG 60.689 65.000 0.00 0.00 0.00 3.69
29 30 0.041982 GAGGTGGAAGAGGGAGGAGT 59.958 60.000 0.00 0.00 0.00 3.85
30 31 0.494095 AGGTGGAAGAGGGAGGAGTT 59.506 55.000 0.00 0.00 0.00 3.01
31 32 0.615850 GGTGGAAGAGGGAGGAGTTG 59.384 60.000 0.00 0.00 0.00 3.16
32 33 0.615850 GTGGAAGAGGGAGGAGTTGG 59.384 60.000 0.00 0.00 0.00 3.77
33 34 0.193574 TGGAAGAGGGAGGAGTTGGT 59.806 55.000 0.00 0.00 0.00 3.67
34 35 0.615850 GGAAGAGGGAGGAGTTGGTG 59.384 60.000 0.00 0.00 0.00 4.17
35 36 1.645710 GAAGAGGGAGGAGTTGGTGA 58.354 55.000 0.00 0.00 0.00 4.02
36 37 1.978580 GAAGAGGGAGGAGTTGGTGAA 59.021 52.381 0.00 0.00 0.00 3.18
37 38 1.353091 AGAGGGAGGAGTTGGTGAAC 58.647 55.000 0.00 0.00 0.00 3.18
38 39 0.037232 GAGGGAGGAGTTGGTGAACG 60.037 60.000 0.00 0.00 37.15 3.95
39 40 0.763223 AGGGAGGAGTTGGTGAACGT 60.763 55.000 0.00 0.00 37.15 3.99
40 41 0.320508 GGGAGGAGTTGGTGAACGTC 60.321 60.000 0.00 0.00 37.15 4.34
41 42 0.666577 GGAGGAGTTGGTGAACGTCG 60.667 60.000 0.00 0.00 37.15 5.12
42 43 1.282930 GAGGAGTTGGTGAACGTCGC 61.283 60.000 0.00 0.00 37.15 5.19
43 44 2.654912 GGAGTTGGTGAACGTCGCG 61.655 63.158 0.00 0.00 37.15 5.87
44 45 3.277742 GAGTTGGTGAACGTCGCGC 62.278 63.158 0.00 0.00 37.15 6.86
61 62 3.554692 CGCGTCCGCTTCATGTCC 61.555 66.667 10.21 0.00 39.32 4.02
62 63 3.554692 GCGTCCGCTTCATGTCCG 61.555 66.667 4.10 0.00 38.26 4.79
63 64 2.126071 CGTCCGCTTCATGTCCGT 60.126 61.111 0.00 0.00 0.00 4.69
64 65 2.444624 CGTCCGCTTCATGTCCGTG 61.445 63.158 0.00 0.00 0.00 4.94
65 66 2.434185 TCCGCTTCATGTCCGTGC 60.434 61.111 0.00 0.00 0.00 5.34
66 67 3.499737 CCGCTTCATGTCCGTGCC 61.500 66.667 0.00 0.00 0.00 5.01
67 68 3.853330 CGCTTCATGTCCGTGCCG 61.853 66.667 0.00 0.00 0.00 5.69
68 69 2.434185 GCTTCATGTCCGTGCCGA 60.434 61.111 0.00 0.00 0.00 5.54
69 70 2.740714 GCTTCATGTCCGTGCCGAC 61.741 63.158 0.00 0.00 0.00 4.79
70 71 2.431771 TTCATGTCCGTGCCGACG 60.432 61.111 0.00 0.00 45.67 5.12
80 81 3.430862 TGCCGACGCAAATGAGGC 61.431 61.111 0.00 0.00 43.74 4.70
81 82 3.127533 GCCGACGCAAATGAGGCT 61.128 61.111 0.00 0.00 44.06 4.58
82 83 3.093278 CCGACGCAAATGAGGCTC 58.907 61.111 7.79 7.79 0.00 4.70
83 84 1.741401 CCGACGCAAATGAGGCTCA 60.741 57.895 21.19 21.19 0.00 4.26
84 85 1.298157 CCGACGCAAATGAGGCTCAA 61.298 55.000 22.84 5.13 0.00 3.02
85 86 0.516877 CGACGCAAATGAGGCTCAAA 59.483 50.000 22.84 0.00 0.00 2.69
86 87 1.131126 CGACGCAAATGAGGCTCAAAT 59.869 47.619 22.84 10.89 0.00 2.32
87 88 2.414559 CGACGCAAATGAGGCTCAAATT 60.415 45.455 22.84 16.39 0.00 1.82
88 89 3.578688 GACGCAAATGAGGCTCAAATTT 58.421 40.909 22.84 15.38 0.00 1.82
89 90 3.319755 ACGCAAATGAGGCTCAAATTTG 58.680 40.909 27.49 27.49 41.88 2.32
90 91 2.669434 CGCAAATGAGGCTCAAATTTGG 59.331 45.455 30.22 21.44 40.20 3.28
91 92 3.614630 CGCAAATGAGGCTCAAATTTGGA 60.615 43.478 30.22 7.38 40.20 3.53
92 93 3.681417 GCAAATGAGGCTCAAATTTGGAC 59.319 43.478 30.22 18.52 40.20 4.02
93 94 4.248058 CAAATGAGGCTCAAATTTGGACC 58.752 43.478 25.52 17.80 37.55 4.46
94 95 2.673775 TGAGGCTCAAATTTGGACCA 57.326 45.000 23.75 12.92 0.00 4.02
95 96 2.517959 TGAGGCTCAAATTTGGACCAG 58.482 47.619 23.75 13.98 0.00 4.00
96 97 1.821136 GAGGCTCAAATTTGGACCAGG 59.179 52.381 23.75 9.21 0.00 4.45
97 98 1.428912 AGGCTCAAATTTGGACCAGGA 59.571 47.619 23.75 3.91 0.00 3.86
98 99 2.158325 AGGCTCAAATTTGGACCAGGAA 60.158 45.455 23.75 3.31 0.00 3.36
99 100 2.833943 GGCTCAAATTTGGACCAGGAAT 59.166 45.455 17.90 0.00 0.00 3.01
100 101 3.368739 GGCTCAAATTTGGACCAGGAATG 60.369 47.826 17.90 0.00 0.00 2.67
101 102 3.368739 GCTCAAATTTGGACCAGGAATGG 60.369 47.826 17.90 0.00 0.00 3.16
102 103 3.172339 TCAAATTTGGACCAGGAATGGG 58.828 45.455 17.90 0.00 0.00 4.00
103 104 2.905736 CAAATTTGGACCAGGAATGGGT 59.094 45.455 10.49 0.00 42.61 4.51
107 108 2.124695 GACCAGGAATGGGTCGGC 60.125 66.667 0.00 0.00 44.80 5.54
108 109 2.933287 ACCAGGAATGGGTCGGCA 60.933 61.111 0.00 0.00 31.49 5.69
109 110 2.124570 CCAGGAATGGGTCGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
110 111 2.124570 CAGGAATGGGTCGGCAGG 60.125 66.667 0.00 0.00 0.00 4.85
111 112 4.115199 AGGAATGGGTCGGCAGGC 62.115 66.667 0.00 0.00 0.00 4.85
113 114 4.467084 GAATGGGTCGGCAGGCGA 62.467 66.667 16.33 16.33 0.00 5.54
114 115 3.969250 GAATGGGTCGGCAGGCGAA 62.969 63.158 22.24 6.13 0.00 4.70
115 116 4.778143 ATGGGTCGGCAGGCGAAC 62.778 66.667 25.69 25.69 0.00 3.95
119 120 3.039588 GTCGGCAGGCGAACGAAA 61.040 61.111 22.24 0.00 38.46 3.46
120 121 2.280254 TCGGCAGGCGAACGAAAA 60.280 55.556 18.10 0.00 33.21 2.29
121 122 2.173382 CGGCAGGCGAACGAAAAG 59.827 61.111 11.78 0.00 0.00 2.27
122 123 2.126850 GGCAGGCGAACGAAAAGC 60.127 61.111 0.00 0.00 0.00 3.51
124 125 2.173382 CAGGCGAACGAAAAGCGG 59.827 61.111 0.00 0.00 46.49 5.52
125 126 2.029964 AGGCGAACGAAAAGCGGA 59.970 55.556 0.00 0.00 46.49 5.54
126 127 1.375523 AGGCGAACGAAAAGCGGAT 60.376 52.632 0.00 0.00 46.49 4.18
127 128 1.226018 GGCGAACGAAAAGCGGATG 60.226 57.895 0.00 0.00 46.49 3.51
128 129 1.863446 GCGAACGAAAAGCGGATGC 60.863 57.895 0.00 0.00 46.49 3.91
129 130 1.495509 CGAACGAAAAGCGGATGCA 59.504 52.632 0.00 0.00 46.23 3.96
130 131 0.789383 CGAACGAAAAGCGGATGCAC 60.789 55.000 0.00 0.00 46.23 4.57
131 132 0.789383 GAACGAAAAGCGGATGCACG 60.789 55.000 0.00 0.00 46.23 5.34
132 133 1.503818 AACGAAAAGCGGATGCACGT 61.504 50.000 0.00 0.00 46.23 4.49
133 134 1.206578 CGAAAAGCGGATGCACGTT 59.793 52.632 0.00 0.00 46.23 3.99
134 135 0.385473 CGAAAAGCGGATGCACGTTT 60.385 50.000 0.00 0.00 46.23 3.60
135 136 1.052287 GAAAAGCGGATGCACGTTTG 58.948 50.000 0.00 0.00 46.23 2.93
136 137 0.383949 AAAAGCGGATGCACGTTTGT 59.616 45.000 0.00 0.00 46.23 2.83
137 138 0.383949 AAAGCGGATGCACGTTTGTT 59.616 45.000 0.00 0.00 46.23 2.83
138 139 0.383949 AAGCGGATGCACGTTTGTTT 59.616 45.000 0.00 0.00 46.23 2.83
139 140 0.317770 AGCGGATGCACGTTTGTTTG 60.318 50.000 0.00 0.00 46.23 2.93
140 141 1.274798 GCGGATGCACGTTTGTTTGG 61.275 55.000 0.00 0.00 42.15 3.28
141 142 0.662970 CGGATGCACGTTTGTTTGGG 60.663 55.000 0.00 0.00 0.00 4.12
142 143 0.387565 GGATGCACGTTTGTTTGGGT 59.612 50.000 0.00 0.00 0.00 4.51
143 144 1.601914 GGATGCACGTTTGTTTGGGTC 60.602 52.381 0.00 0.00 0.00 4.46
144 145 0.030101 ATGCACGTTTGTTTGGGTCG 59.970 50.000 0.00 0.00 0.00 4.79
145 146 1.298788 GCACGTTTGTTTGGGTCGG 60.299 57.895 0.00 0.00 0.00 4.79
146 147 1.298788 CACGTTTGTTTGGGTCGGC 60.299 57.895 0.00 0.00 0.00 5.54
147 148 2.051703 CGTTTGTTTGGGTCGGCG 60.052 61.111 0.00 0.00 0.00 6.46
148 149 2.354188 GTTTGTTTGGGTCGGCGC 60.354 61.111 0.00 0.00 0.00 6.53
149 150 3.955101 TTTGTTTGGGTCGGCGCG 61.955 61.111 0.00 0.00 0.00 6.86
152 153 4.676586 GTTTGGGTCGGCGCGTTG 62.677 66.667 8.43 0.00 0.00 4.10
165 166 2.983592 CGTTGGGCCGCCTTTTCT 60.984 61.111 9.86 0.00 0.00 2.52
166 167 2.650778 GTTGGGCCGCCTTTTCTG 59.349 61.111 9.86 0.00 0.00 3.02
167 168 2.197324 TTGGGCCGCCTTTTCTGT 59.803 55.556 9.86 0.00 0.00 3.41
168 169 1.901464 TTGGGCCGCCTTTTCTGTC 60.901 57.895 9.86 0.00 0.00 3.51
169 170 3.062466 GGGCCGCCTTTTCTGTCC 61.062 66.667 9.86 0.00 0.00 4.02
170 171 3.431725 GGCCGCCTTTTCTGTCCG 61.432 66.667 0.71 0.00 0.00 4.79
171 172 4.103103 GCCGCCTTTTCTGTCCGC 62.103 66.667 0.00 0.00 0.00 5.54
172 173 3.788766 CCGCCTTTTCTGTCCGCG 61.789 66.667 0.00 0.00 42.37 6.46
173 174 2.736995 CGCCTTTTCTGTCCGCGA 60.737 61.111 8.23 0.00 45.41 5.87
174 175 2.861006 GCCTTTTCTGTCCGCGAC 59.139 61.111 8.23 4.50 0.00 5.19
175 176 3.011760 GCCTTTTCTGTCCGCGACG 62.012 63.158 8.23 0.00 34.95 5.12
176 177 1.372499 CCTTTTCTGTCCGCGACGA 60.372 57.895 8.23 0.00 34.95 4.20
177 178 0.736325 CCTTTTCTGTCCGCGACGAT 60.736 55.000 8.23 0.00 34.95 3.73
178 179 0.640768 CTTTTCTGTCCGCGACGATC 59.359 55.000 8.23 0.00 34.95 3.69
179 180 0.734942 TTTTCTGTCCGCGACGATCC 60.735 55.000 8.23 0.00 34.95 3.36
180 181 1.868987 TTTCTGTCCGCGACGATCCA 61.869 55.000 8.23 0.00 34.95 3.41
181 182 1.868987 TTCTGTCCGCGACGATCCAA 61.869 55.000 8.23 0.00 34.95 3.53
182 183 1.445410 CTGTCCGCGACGATCCAAA 60.445 57.895 8.23 0.00 34.95 3.28
183 184 1.683790 CTGTCCGCGACGATCCAAAC 61.684 60.000 8.23 0.00 34.95 2.93
184 185 2.505337 TCCGCGACGATCCAAACG 60.505 61.111 8.23 0.00 0.00 3.60
185 186 3.550992 CCGCGACGATCCAAACGG 61.551 66.667 8.23 0.00 34.93 4.44
186 187 2.505337 CGCGACGATCCAAACGGA 60.505 61.111 0.00 0.00 36.85 4.69
187 188 2.785105 CGCGACGATCCAAACGGAC 61.785 63.158 0.00 0.00 34.62 4.79
188 189 1.735198 GCGACGATCCAAACGGACA 60.735 57.895 0.00 0.00 34.62 4.02
189 190 1.952266 GCGACGATCCAAACGGACAC 61.952 60.000 0.00 0.00 34.62 3.67
191 192 1.952266 GACGATCCAAACGGACACGC 61.952 60.000 8.96 1.53 46.04 5.34
192 193 2.776072 GATCCAAACGGACACGCG 59.224 61.111 3.53 3.53 46.04 6.01
193 194 3.362851 GATCCAAACGGACACGCGC 62.363 63.158 5.73 0.00 46.04 6.86
202 203 3.475774 GACACGCGCGGACGAAAT 61.476 61.111 35.22 8.09 43.93 2.17
203 204 3.680072 GACACGCGCGGACGAAATG 62.680 63.158 35.22 22.80 43.93 2.32
204 205 3.474904 CACGCGCGGACGAAATGA 61.475 61.111 35.22 0.00 43.93 2.57
205 206 3.179265 ACGCGCGGACGAAATGAG 61.179 61.111 35.22 1.22 43.93 2.90
206 207 3.179265 CGCGCGGACGAAATGAGT 61.179 61.111 24.84 0.00 43.93 3.41
207 208 2.695646 GCGCGGACGAAATGAGTC 59.304 61.111 8.83 0.00 43.93 3.36
208 209 1.805945 GCGCGGACGAAATGAGTCT 60.806 57.895 8.83 0.00 43.93 3.24
209 210 1.991430 CGCGGACGAAATGAGTCTG 59.009 57.895 0.00 1.17 45.24 3.51
211 212 1.991430 CGGACGAAATGAGTCTGCG 59.009 57.895 0.00 0.00 38.05 5.18
212 213 1.710339 GGACGAAATGAGTCTGCGC 59.290 57.895 0.00 0.00 38.58 6.09
213 214 1.341802 GACGAAATGAGTCTGCGCG 59.658 57.895 0.00 0.00 35.84 6.86
214 215 1.344942 GACGAAATGAGTCTGCGCGT 61.345 55.000 8.43 0.00 35.84 6.01
215 216 0.944311 ACGAAATGAGTCTGCGCGTT 60.944 50.000 8.43 0.00 0.00 4.84
216 217 0.517132 CGAAATGAGTCTGCGCGTTG 60.517 55.000 8.43 0.25 0.00 4.10
217 218 0.179215 GAAATGAGTCTGCGCGTTGG 60.179 55.000 8.43 0.00 0.00 3.77
218 219 0.602638 AAATGAGTCTGCGCGTTGGA 60.603 50.000 8.43 0.28 0.00 3.53
219 220 1.016130 AATGAGTCTGCGCGTTGGAG 61.016 55.000 8.43 0.00 37.38 3.86
220 221 2.049063 GAGTCTGCGCGTTGGAGT 60.049 61.111 8.43 6.56 37.31 3.85
221 222 1.664965 GAGTCTGCGCGTTGGAGTT 60.665 57.895 8.43 0.00 37.31 3.01
222 223 1.891060 GAGTCTGCGCGTTGGAGTTG 61.891 60.000 8.43 0.00 37.31 3.16
223 224 3.345808 TCTGCGCGTTGGAGTTGC 61.346 61.111 8.43 0.00 37.31 4.17
224 225 3.349006 CTGCGCGTTGGAGTTGCT 61.349 61.111 8.43 0.00 0.00 3.91
225 226 3.300667 CTGCGCGTTGGAGTTGCTC 62.301 63.158 8.43 0.00 0.00 4.26
226 227 3.044305 GCGCGTTGGAGTTGCTCT 61.044 61.111 8.43 0.00 0.00 4.09
227 228 3.016474 GCGCGTTGGAGTTGCTCTC 62.016 63.158 8.43 1.79 42.07 3.20
228 229 1.664649 CGCGTTGGAGTTGCTCTCA 60.665 57.895 0.00 0.00 44.40 3.27
229 230 1.016130 CGCGTTGGAGTTGCTCTCAT 61.016 55.000 0.00 0.00 44.40 2.90
230 231 0.445436 GCGTTGGAGTTGCTCTCATG 59.555 55.000 10.56 0.00 44.40 3.07
231 232 1.081892 CGTTGGAGTTGCTCTCATGG 58.918 55.000 10.56 0.00 44.40 3.66
232 233 0.807496 GTTGGAGTTGCTCTCATGGC 59.193 55.000 10.56 0.00 44.40 4.40
233 234 0.322816 TTGGAGTTGCTCTCATGGCC 60.323 55.000 0.00 0.00 44.40 5.36
234 235 1.203441 TGGAGTTGCTCTCATGGCCT 61.203 55.000 3.32 0.00 44.40 5.19
235 236 0.463474 GGAGTTGCTCTCATGGCCTC 60.463 60.000 3.32 0.00 44.40 4.70
236 237 0.540923 GAGTTGCTCTCATGGCCTCT 59.459 55.000 3.32 0.00 42.34 3.69
237 238 1.759445 GAGTTGCTCTCATGGCCTCTA 59.241 52.381 3.32 0.00 42.34 2.43
238 239 2.169352 GAGTTGCTCTCATGGCCTCTAA 59.831 50.000 3.32 0.00 42.34 2.10
239 240 2.573462 AGTTGCTCTCATGGCCTCTAAA 59.427 45.455 3.32 0.00 0.00 1.85
240 241 2.941720 GTTGCTCTCATGGCCTCTAAAG 59.058 50.000 3.32 0.00 0.00 1.85
241 242 2.470990 TGCTCTCATGGCCTCTAAAGA 58.529 47.619 3.32 0.00 0.00 2.52
242 243 2.169352 TGCTCTCATGGCCTCTAAAGAC 59.831 50.000 3.32 0.00 0.00 3.01
243 244 2.801342 GCTCTCATGGCCTCTAAAGACG 60.801 54.545 3.32 0.00 0.00 4.18
244 245 2.690497 CTCTCATGGCCTCTAAAGACGA 59.310 50.000 3.32 0.00 0.00 4.20
245 246 2.427453 TCTCATGGCCTCTAAAGACGAC 59.573 50.000 3.32 0.00 0.00 4.34
246 247 2.166459 CTCATGGCCTCTAAAGACGACA 59.834 50.000 3.32 0.00 0.00 4.35
247 248 2.565391 TCATGGCCTCTAAAGACGACAA 59.435 45.455 3.32 0.00 0.00 3.18
248 249 2.743636 TGGCCTCTAAAGACGACAAG 57.256 50.000 3.32 0.00 0.00 3.16
249 250 1.968493 TGGCCTCTAAAGACGACAAGT 59.032 47.619 3.32 0.00 0.00 3.16
250 251 2.288825 TGGCCTCTAAAGACGACAAGTG 60.289 50.000 3.32 0.00 0.00 3.16
251 252 2.338500 GCCTCTAAAGACGACAAGTGG 58.662 52.381 0.00 0.00 0.00 4.00
252 253 2.288886 GCCTCTAAAGACGACAAGTGGT 60.289 50.000 0.00 0.00 0.00 4.16
253 254 3.318017 CCTCTAAAGACGACAAGTGGTG 58.682 50.000 0.00 0.00 0.00 4.17
254 255 3.005472 CCTCTAAAGACGACAAGTGGTGA 59.995 47.826 0.00 0.00 0.00 4.02
255 256 4.230657 CTCTAAAGACGACAAGTGGTGAG 58.769 47.826 0.00 0.00 0.00 3.51
256 257 2.240493 AAAGACGACAAGTGGTGAGG 57.760 50.000 0.00 0.00 0.00 3.86
257 258 1.410004 AAGACGACAAGTGGTGAGGA 58.590 50.000 0.00 0.00 0.00 3.71
258 259 1.633774 AGACGACAAGTGGTGAGGAT 58.366 50.000 0.00 0.00 0.00 3.24
259 260 1.273606 AGACGACAAGTGGTGAGGATG 59.726 52.381 0.00 0.00 0.00 3.51
260 261 1.272490 GACGACAAGTGGTGAGGATGA 59.728 52.381 0.00 0.00 0.00 2.92
261 262 1.000955 ACGACAAGTGGTGAGGATGAC 59.999 52.381 0.00 0.00 0.00 3.06
262 263 1.714794 GACAAGTGGTGAGGATGACG 58.285 55.000 0.00 0.00 0.00 4.35
263 264 0.321671 ACAAGTGGTGAGGATGACGG 59.678 55.000 0.00 0.00 0.00 4.79
264 265 0.321671 CAAGTGGTGAGGATGACGGT 59.678 55.000 0.00 0.00 0.00 4.83
265 266 1.056660 AAGTGGTGAGGATGACGGTT 58.943 50.000 0.00 0.00 0.00 4.44
266 267 0.321671 AGTGGTGAGGATGACGGTTG 59.678 55.000 0.00 0.00 0.00 3.77
267 268 0.034896 GTGGTGAGGATGACGGTTGT 59.965 55.000 0.00 0.00 0.00 3.32
268 269 1.274167 GTGGTGAGGATGACGGTTGTA 59.726 52.381 0.00 0.00 0.00 2.41
269 270 1.548719 TGGTGAGGATGACGGTTGTAG 59.451 52.381 0.00 0.00 0.00 2.74
270 271 1.822990 GGTGAGGATGACGGTTGTAGA 59.177 52.381 0.00 0.00 0.00 2.59
271 272 2.232941 GGTGAGGATGACGGTTGTAGAA 59.767 50.000 0.00 0.00 0.00 2.10
272 273 3.306502 GGTGAGGATGACGGTTGTAGAAA 60.307 47.826 0.00 0.00 0.00 2.52
273 274 4.504858 GTGAGGATGACGGTTGTAGAAAT 58.495 43.478 0.00 0.00 0.00 2.17
274 275 4.567159 GTGAGGATGACGGTTGTAGAAATC 59.433 45.833 0.00 0.00 0.00 2.17
275 276 4.221924 TGAGGATGACGGTTGTAGAAATCA 59.778 41.667 0.00 0.00 0.00 2.57
276 277 4.759782 AGGATGACGGTTGTAGAAATCAG 58.240 43.478 0.00 0.00 0.00 2.90
277 278 4.223032 AGGATGACGGTTGTAGAAATCAGT 59.777 41.667 0.00 0.00 0.00 3.41
278 279 4.935808 GGATGACGGTTGTAGAAATCAGTT 59.064 41.667 0.00 0.00 0.00 3.16
279 280 5.163854 GGATGACGGTTGTAGAAATCAGTTG 60.164 44.000 0.00 0.00 0.00 3.16
280 281 3.496884 TGACGGTTGTAGAAATCAGTTGC 59.503 43.478 0.00 0.00 0.00 4.17
281 282 3.472652 ACGGTTGTAGAAATCAGTTGCA 58.527 40.909 0.00 0.00 0.00 4.08
282 283 4.072131 ACGGTTGTAGAAATCAGTTGCAT 58.928 39.130 0.00 0.00 0.00 3.96
283 284 4.518970 ACGGTTGTAGAAATCAGTTGCATT 59.481 37.500 0.00 0.00 0.00 3.56
284 285 4.853196 CGGTTGTAGAAATCAGTTGCATTG 59.147 41.667 0.00 0.00 0.00 2.82
285 286 5.163513 GGTTGTAGAAATCAGTTGCATTGG 58.836 41.667 0.00 0.00 0.00 3.16
286 287 5.048083 GGTTGTAGAAATCAGTTGCATTGGA 60.048 40.000 0.00 0.00 0.00 3.53
287 288 5.885230 TGTAGAAATCAGTTGCATTGGAG 57.115 39.130 0.00 0.00 0.00 3.86
288 289 5.316167 TGTAGAAATCAGTTGCATTGGAGT 58.684 37.500 0.00 0.00 0.00 3.85
289 290 5.769662 TGTAGAAATCAGTTGCATTGGAGTT 59.230 36.000 0.00 0.00 0.00 3.01
290 291 5.796424 AGAAATCAGTTGCATTGGAGTTT 57.204 34.783 0.00 0.00 0.00 2.66
291 292 6.165700 AGAAATCAGTTGCATTGGAGTTTT 57.834 33.333 0.00 0.00 0.00 2.43
292 293 6.218746 AGAAATCAGTTGCATTGGAGTTTTC 58.781 36.000 0.00 0.00 0.00 2.29
293 294 5.796424 AATCAGTTGCATTGGAGTTTTCT 57.204 34.783 0.00 0.00 0.00 2.52
294 295 5.796424 ATCAGTTGCATTGGAGTTTTCTT 57.204 34.783 0.00 0.00 0.00 2.52
295 296 4.935702 TCAGTTGCATTGGAGTTTTCTTG 58.064 39.130 0.00 0.00 0.00 3.02
296 297 3.492011 CAGTTGCATTGGAGTTTTCTTGC 59.508 43.478 0.00 0.00 0.00 4.01
297 298 3.132646 AGTTGCATTGGAGTTTTCTTGCA 59.867 39.130 0.00 0.00 38.24 4.08
298 299 3.815856 TGCATTGGAGTTTTCTTGCAA 57.184 38.095 0.00 0.00 37.17 4.08
299 300 4.134379 TGCATTGGAGTTTTCTTGCAAA 57.866 36.364 0.00 0.00 37.17 3.68
300 301 4.706035 TGCATTGGAGTTTTCTTGCAAAT 58.294 34.783 0.00 0.00 37.17 2.32
301 302 4.512198 TGCATTGGAGTTTTCTTGCAAATG 59.488 37.500 0.00 0.00 37.17 2.32
302 303 4.512571 GCATTGGAGTTTTCTTGCAAATGT 59.487 37.500 0.00 0.00 29.63 2.71
303 304 5.007921 GCATTGGAGTTTTCTTGCAAATGTT 59.992 36.000 0.00 0.00 29.63 2.71
304 305 6.458615 GCATTGGAGTTTTCTTGCAAATGTTT 60.459 34.615 0.00 0.00 29.63 2.83
305 306 6.419980 TTGGAGTTTTCTTGCAAATGTTTG 57.580 33.333 0.00 1.19 41.03 2.93
306 307 5.486526 TGGAGTTTTCTTGCAAATGTTTGT 58.513 33.333 0.00 0.00 40.24 2.83
307 308 5.350914 TGGAGTTTTCTTGCAAATGTTTGTG 59.649 36.000 0.00 0.00 40.24 3.33
308 309 5.220643 GGAGTTTTCTTGCAAATGTTTGTGG 60.221 40.000 0.00 0.00 40.24 4.17
309 310 5.486526 AGTTTTCTTGCAAATGTTTGTGGA 58.513 33.333 0.00 0.00 40.24 4.02
310 311 5.351189 AGTTTTCTTGCAAATGTTTGTGGAC 59.649 36.000 0.00 0.00 40.24 4.02
311 312 4.462508 TTCTTGCAAATGTTTGTGGACA 57.537 36.364 0.00 0.00 40.24 4.02
312 313 4.669206 TCTTGCAAATGTTTGTGGACAT 57.331 36.364 0.00 0.00 41.83 3.06
313 314 4.370049 TCTTGCAAATGTTTGTGGACATG 58.630 39.130 0.00 0.00 40.03 3.21
314 315 2.481854 TGCAAATGTTTGTGGACATGC 58.518 42.857 7.26 0.00 40.03 4.06
315 316 1.456544 GCAAATGTTTGTGGACATGCG 59.543 47.619 7.26 0.00 40.03 4.73
316 317 2.741612 CAAATGTTTGTGGACATGCGT 58.258 42.857 0.00 0.00 40.03 5.24
317 318 2.704725 AATGTTTGTGGACATGCGTC 57.295 45.000 0.00 0.00 40.03 5.19
318 319 0.516877 ATGTTTGTGGACATGCGTCG 59.483 50.000 0.00 0.00 43.61 5.12
319 320 0.812014 TGTTTGTGGACATGCGTCGT 60.812 50.000 0.00 0.00 43.61 4.34
320 321 0.110823 GTTTGTGGACATGCGTCGTC 60.111 55.000 0.00 1.28 43.61 4.20
321 322 0.249699 TTTGTGGACATGCGTCGTCT 60.250 50.000 0.00 0.00 43.61 4.18
322 323 0.666274 TTGTGGACATGCGTCGTCTC 60.666 55.000 0.00 4.19 43.61 3.36
323 324 1.213013 GTGGACATGCGTCGTCTCT 59.787 57.895 0.00 0.00 43.61 3.10
324 325 0.798771 GTGGACATGCGTCGTCTCTC 60.799 60.000 0.00 0.00 43.61 3.20
325 326 1.226717 GGACATGCGTCGTCTCTCC 60.227 63.158 0.00 0.00 43.61 3.71
326 327 1.658686 GGACATGCGTCGTCTCTCCT 61.659 60.000 0.00 0.00 43.61 3.69
327 328 0.171455 GACATGCGTCGTCTCTCCTT 59.829 55.000 0.00 0.00 31.07 3.36
328 329 0.603569 ACATGCGTCGTCTCTCCTTT 59.396 50.000 0.00 0.00 0.00 3.11
329 330 1.000955 ACATGCGTCGTCTCTCCTTTT 59.999 47.619 0.00 0.00 0.00 2.27
330 331 1.656095 CATGCGTCGTCTCTCCTTTTC 59.344 52.381 0.00 0.00 0.00 2.29
331 332 0.959553 TGCGTCGTCTCTCCTTTTCT 59.040 50.000 0.00 0.00 0.00 2.52
332 333 1.340248 TGCGTCGTCTCTCCTTTTCTT 59.660 47.619 0.00 0.00 0.00 2.52
333 334 2.223971 TGCGTCGTCTCTCCTTTTCTTT 60.224 45.455 0.00 0.00 0.00 2.52
334 335 2.409041 GCGTCGTCTCTCCTTTTCTTTC 59.591 50.000 0.00 0.00 0.00 2.62
335 336 3.639538 CGTCGTCTCTCCTTTTCTTTCA 58.360 45.455 0.00 0.00 0.00 2.69
336 337 3.670991 CGTCGTCTCTCCTTTTCTTTCAG 59.329 47.826 0.00 0.00 0.00 3.02
337 338 4.623002 GTCGTCTCTCCTTTTCTTTCAGT 58.377 43.478 0.00 0.00 0.00 3.41
338 339 4.446051 GTCGTCTCTCCTTTTCTTTCAGTG 59.554 45.833 0.00 0.00 0.00 3.66
339 340 4.099573 TCGTCTCTCCTTTTCTTTCAGTGT 59.900 41.667 0.00 0.00 0.00 3.55
340 341 4.446051 CGTCTCTCCTTTTCTTTCAGTGTC 59.554 45.833 0.00 0.00 0.00 3.67
341 342 5.606505 GTCTCTCCTTTTCTTTCAGTGTCT 58.393 41.667 0.00 0.00 0.00 3.41
342 343 6.052360 GTCTCTCCTTTTCTTTCAGTGTCTT 58.948 40.000 0.00 0.00 0.00 3.01
343 344 6.540551 GTCTCTCCTTTTCTTTCAGTGTCTTT 59.459 38.462 0.00 0.00 0.00 2.52
344 345 7.066404 GTCTCTCCTTTTCTTTCAGTGTCTTTT 59.934 37.037 0.00 0.00 0.00 2.27
345 346 7.611855 TCTCTCCTTTTCTTTCAGTGTCTTTTT 59.388 33.333 0.00 0.00 0.00 1.94
346 347 8.801882 TCTCCTTTTCTTTCAGTGTCTTTTTA 57.198 30.769 0.00 0.00 0.00 1.52
347 348 9.408648 TCTCCTTTTCTTTCAGTGTCTTTTTAT 57.591 29.630 0.00 0.00 0.00 1.40
350 351 9.899226 CCTTTTCTTTCAGTGTCTTTTTATAGG 57.101 33.333 0.00 0.00 0.00 2.57
351 352 9.399403 CTTTTCTTTCAGTGTCTTTTTATAGGC 57.601 33.333 0.00 0.00 0.00 3.93
352 353 7.448748 TTCTTTCAGTGTCTTTTTATAGGCC 57.551 36.000 0.00 0.00 0.00 5.19
353 354 6.779860 TCTTTCAGTGTCTTTTTATAGGCCT 58.220 36.000 11.78 11.78 0.00 5.19
354 355 7.231467 TCTTTCAGTGTCTTTTTATAGGCCTT 58.769 34.615 12.58 0.81 0.00 4.35
355 356 7.724061 TCTTTCAGTGTCTTTTTATAGGCCTTT 59.276 33.333 12.58 5.50 0.00 3.11
356 357 7.833285 TTCAGTGTCTTTTTATAGGCCTTTT 57.167 32.000 12.58 0.84 0.00 2.27
357 358 7.448748 TCAGTGTCTTTTTATAGGCCTTTTC 57.551 36.000 12.58 0.00 0.00 2.29
358 359 7.231467 TCAGTGTCTTTTTATAGGCCTTTTCT 58.769 34.615 12.58 0.00 0.00 2.52
359 360 7.724061 TCAGTGTCTTTTTATAGGCCTTTTCTT 59.276 33.333 12.58 0.00 0.00 2.52
360 361 8.360390 CAGTGTCTTTTTATAGGCCTTTTCTTT 58.640 33.333 12.58 0.00 0.00 2.52
361 362 8.577296 AGTGTCTTTTTATAGGCCTTTTCTTTC 58.423 33.333 12.58 0.00 0.00 2.62
362 363 8.357402 GTGTCTTTTTATAGGCCTTTTCTTTCA 58.643 33.333 12.58 0.00 0.00 2.69
363 364 9.088987 TGTCTTTTTATAGGCCTTTTCTTTCAT 57.911 29.630 12.58 0.00 0.00 2.57
364 365 9.358872 GTCTTTTTATAGGCCTTTTCTTTCATG 57.641 33.333 12.58 0.00 0.00 3.07
365 366 8.531146 TCTTTTTATAGGCCTTTTCTTTCATGG 58.469 33.333 12.58 0.00 0.00 3.66
366 367 7.790782 TTTTATAGGCCTTTTCTTTCATGGT 57.209 32.000 12.58 0.00 0.00 3.55
367 368 7.790782 TTTATAGGCCTTTTCTTTCATGGTT 57.209 32.000 12.58 0.00 0.00 3.67
368 369 5.665916 ATAGGCCTTTTCTTTCATGGTTG 57.334 39.130 12.58 0.00 0.00 3.77
369 370 2.037641 AGGCCTTTTCTTTCATGGTTGC 59.962 45.455 0.00 0.00 0.00 4.17
370 371 2.224257 GGCCTTTTCTTTCATGGTTGCA 60.224 45.455 0.00 0.00 0.00 4.08
371 372 3.557686 GGCCTTTTCTTTCATGGTTGCAT 60.558 43.478 0.00 0.00 0.00 3.96
372 373 3.681417 GCCTTTTCTTTCATGGTTGCATC 59.319 43.478 0.00 0.00 0.00 3.91
373 374 4.248058 CCTTTTCTTTCATGGTTGCATCC 58.752 43.478 6.88 6.88 0.00 3.51
374 375 4.262549 CCTTTTCTTTCATGGTTGCATCCA 60.263 41.667 18.62 18.62 42.01 3.41
375 376 4.524316 TTTCTTTCATGGTTGCATCCAG 57.476 40.909 20.69 13.03 41.05 3.86
376 377 2.449464 TCTTTCATGGTTGCATCCAGG 58.551 47.619 20.00 20.00 41.05 4.45
377 378 2.041485 TCTTTCATGGTTGCATCCAGGA 59.959 45.455 23.63 23.63 44.75 3.86
378 379 2.832643 TTCATGGTTGCATCCAGGAT 57.167 45.000 26.80 7.22 45.52 3.24
379 380 3.949586 TTCATGGTTGCATCCAGGATA 57.050 42.857 26.80 16.75 45.52 2.59
380 381 4.458256 TTCATGGTTGCATCCAGGATAT 57.542 40.909 26.80 6.52 45.52 1.63
381 382 4.458256 TCATGGTTGCATCCAGGATATT 57.542 40.909 23.63 3.52 42.21 1.28
382 383 4.146564 TCATGGTTGCATCCAGGATATTG 58.853 43.478 23.63 14.75 42.21 1.90
383 384 3.668141 TGGTTGCATCCAGGATATTGT 57.332 42.857 12.62 0.00 33.19 2.71
384 385 4.787135 TGGTTGCATCCAGGATATTGTA 57.213 40.909 12.62 0.00 33.19 2.41
385 386 5.122707 TGGTTGCATCCAGGATATTGTAA 57.877 39.130 12.62 0.00 33.19 2.41
386 387 5.514169 TGGTTGCATCCAGGATATTGTAAA 58.486 37.500 12.62 0.00 33.19 2.01
387 388 5.359576 TGGTTGCATCCAGGATATTGTAAAC 59.640 40.000 12.62 0.88 33.19 2.01
388 389 5.594317 GGTTGCATCCAGGATATTGTAAACT 59.406 40.000 9.02 0.00 0.00 2.66
389 390 6.096846 GGTTGCATCCAGGATATTGTAAACTT 59.903 38.462 9.02 0.00 0.00 2.66
390 391 7.363793 GGTTGCATCCAGGATATTGTAAACTTT 60.364 37.037 9.02 0.00 0.00 2.66
391 392 7.099266 TGCATCCAGGATATTGTAAACTTTG 57.901 36.000 0.00 0.00 0.00 2.77
392 393 6.889177 TGCATCCAGGATATTGTAAACTTTGA 59.111 34.615 0.00 0.00 0.00 2.69
393 394 7.395772 TGCATCCAGGATATTGTAAACTTTGAA 59.604 33.333 0.00 0.00 0.00 2.69
394 395 8.416329 GCATCCAGGATATTGTAAACTTTGAAT 58.584 33.333 0.00 0.00 0.00 2.57
395 396 9.740239 CATCCAGGATATTGTAAACTTTGAATG 57.260 33.333 0.00 0.00 0.00 2.67
396 397 8.877864 TCCAGGATATTGTAAACTTTGAATGT 57.122 30.769 0.00 0.00 0.00 2.71
397 398 9.308000 TCCAGGATATTGTAAACTTTGAATGTT 57.692 29.630 0.00 0.00 0.00 2.71
398 399 9.927668 CCAGGATATTGTAAACTTTGAATGTTT 57.072 29.630 12.77 12.77 40.27 2.83
402 403 9.726034 GATATTGTAAACTTTGAATGTTTTGCG 57.274 29.630 13.30 0.00 38.41 4.85
403 404 6.952935 TTGTAAACTTTGAATGTTTTGCGT 57.047 29.167 13.30 0.00 38.41 5.24
404 405 6.952935 TGTAAACTTTGAATGTTTTGCGTT 57.047 29.167 13.30 0.00 38.41 4.84
405 406 7.352719 TGTAAACTTTGAATGTTTTGCGTTT 57.647 28.000 13.30 0.00 38.41 3.60
406 407 7.230222 TGTAAACTTTGAATGTTTTGCGTTTG 58.770 30.769 13.30 0.00 38.41 2.93
407 408 5.854431 AACTTTGAATGTTTTGCGTTTGT 57.146 30.435 0.00 0.00 0.00 2.83
408 409 5.202046 ACTTTGAATGTTTTGCGTTTGTG 57.798 34.783 0.00 0.00 0.00 3.33
409 410 4.688413 ACTTTGAATGTTTTGCGTTTGTGT 59.312 33.333 0.00 0.00 0.00 3.72
410 411 5.864474 ACTTTGAATGTTTTGCGTTTGTGTA 59.136 32.000 0.00 0.00 0.00 2.90
411 412 6.533367 ACTTTGAATGTTTTGCGTTTGTGTAT 59.467 30.769 0.00 0.00 0.00 2.29
412 413 5.879948 TGAATGTTTTGCGTTTGTGTATG 57.120 34.783 0.00 0.00 0.00 2.39
413 414 5.582550 TGAATGTTTTGCGTTTGTGTATGA 58.417 33.333 0.00 0.00 0.00 2.15
414 415 5.685068 TGAATGTTTTGCGTTTGTGTATGAG 59.315 36.000 0.00 0.00 0.00 2.90
415 416 4.624336 TGTTTTGCGTTTGTGTATGAGT 57.376 36.364 0.00 0.00 0.00 3.41
416 417 4.346970 TGTTTTGCGTTTGTGTATGAGTG 58.653 39.130 0.00 0.00 0.00 3.51
417 418 4.095036 TGTTTTGCGTTTGTGTATGAGTGA 59.905 37.500 0.00 0.00 0.00 3.41
418 419 4.466567 TTTGCGTTTGTGTATGAGTGAG 57.533 40.909 0.00 0.00 0.00 3.51
419 420 1.798223 TGCGTTTGTGTATGAGTGAGC 59.202 47.619 0.00 0.00 0.00 4.26
420 421 1.201812 GCGTTTGTGTATGAGTGAGCG 60.202 52.381 0.00 0.00 0.00 5.03
421 422 1.390123 CGTTTGTGTATGAGTGAGCGG 59.610 52.381 0.00 0.00 0.00 5.52
422 423 2.683968 GTTTGTGTATGAGTGAGCGGA 58.316 47.619 0.00 0.00 0.00 5.54
423 424 2.363788 TTGTGTATGAGTGAGCGGAC 57.636 50.000 0.00 0.00 0.00 4.79
424 425 1.253100 TGTGTATGAGTGAGCGGACA 58.747 50.000 0.00 0.00 0.00 4.02
425 426 1.616374 TGTGTATGAGTGAGCGGACAA 59.384 47.619 0.00 0.00 0.00 3.18
426 427 2.036604 TGTGTATGAGTGAGCGGACAAA 59.963 45.455 0.00 0.00 0.00 2.83
427 428 3.064207 GTGTATGAGTGAGCGGACAAAA 58.936 45.455 0.00 0.00 0.00 2.44
428 429 3.496884 GTGTATGAGTGAGCGGACAAAAA 59.503 43.478 0.00 0.00 0.00 1.94
429 430 4.154195 GTGTATGAGTGAGCGGACAAAAAT 59.846 41.667 0.00 0.00 0.00 1.82
430 431 4.759693 TGTATGAGTGAGCGGACAAAAATT 59.240 37.500 0.00 0.00 0.00 1.82
431 432 4.853924 ATGAGTGAGCGGACAAAAATTT 57.146 36.364 0.00 0.00 0.00 1.82
432 433 4.647424 TGAGTGAGCGGACAAAAATTTT 57.353 36.364 0.00 0.00 0.00 1.82
433 434 5.004922 TGAGTGAGCGGACAAAAATTTTT 57.995 34.783 10.41 10.41 0.00 1.94
484 485 2.691409 TTTCTCGAATGGAGCGGATT 57.309 45.000 0.00 0.00 42.82 3.01
567 568 0.250124 TCGGCCAGAACGTTGTGAAT 60.250 50.000 25.53 0.00 0.00 2.57
602 603 1.227031 TTCCACGCTAATACGCCGG 60.227 57.895 0.00 0.00 36.19 6.13
628 629 1.519455 CGGCGGGTCAAGTCTGATC 60.519 63.158 0.00 0.00 33.05 2.92
681 689 2.972625 CATGGACAGTACATGGACGTT 58.027 47.619 17.29 0.00 41.46 3.99
689 697 4.201871 ACAGTACATGGACGTTTGTTTGTG 60.202 41.667 1.41 0.00 0.00 3.33
701 709 1.948104 TGTTTGTGTGTCGAAGGAGG 58.052 50.000 0.00 0.00 0.00 4.30
702 710 1.226746 GTTTGTGTGTCGAAGGAGGG 58.773 55.000 0.00 0.00 0.00 4.30
703 711 0.107831 TTTGTGTGTCGAAGGAGGGG 59.892 55.000 0.00 0.00 0.00 4.79
709 717 0.619255 TGTCGAAGGAGGGGCCATTA 60.619 55.000 4.39 0.00 40.02 1.90
814 866 3.388024 AGCAAACTTTTCCCTTTCTTCCC 59.612 43.478 0.00 0.00 0.00 3.97
819 871 1.158007 TTTCCCTTTCTTCCCCTGCT 58.842 50.000 0.00 0.00 0.00 4.24
820 872 0.698818 TTCCCTTTCTTCCCCTGCTC 59.301 55.000 0.00 0.00 0.00 4.26
843 895 4.649705 TCTCCCCCGTCCAAGCCA 62.650 66.667 0.00 0.00 0.00 4.75
844 896 4.101448 CTCCCCCGTCCAAGCCAG 62.101 72.222 0.00 0.00 0.00 4.85
886 938 1.012486 ACTCGACAAAACCCGATCGC 61.012 55.000 10.32 0.00 34.59 4.58
913 965 1.447838 TCGACCGATCAAAGCCAGC 60.448 57.895 0.00 0.00 0.00 4.85
914 966 2.464459 CGACCGATCAAAGCCAGCC 61.464 63.158 0.00 0.00 0.00 4.85
915 967 2.044946 ACCGATCAAAGCCAGCCC 60.045 61.111 0.00 0.00 0.00 5.19
916 968 2.045045 CCGATCAAAGCCAGCCCA 60.045 61.111 0.00 0.00 0.00 5.36
917 969 2.409870 CCGATCAAAGCCAGCCCAC 61.410 63.158 0.00 0.00 0.00 4.61
918 970 2.753966 CGATCAAAGCCAGCCCACG 61.754 63.158 0.00 0.00 0.00 4.94
919 971 3.056313 GATCAAAGCCAGCCCACGC 62.056 63.158 0.00 0.00 0.00 5.34
967 1033 4.166378 ACGATCCCCCGATCCCCA 62.166 66.667 0.00 0.00 41.77 4.96
1617 1705 0.172578 TCCGCATGAACGTCTACCTG 59.827 55.000 0.00 0.00 0.00 4.00
1704 1792 0.169009 GCACGCTCCCAAAATGAGAC 59.831 55.000 0.00 0.00 31.26 3.36
1816 1905 3.696898 CAGTCTTCGTAGTCTGTATGCC 58.303 50.000 7.87 0.00 34.23 4.40
1872 1961 4.988540 GGGGAGTTTTGATTTGTTTGTAGC 59.011 41.667 0.00 0.00 0.00 3.58
1942 2032 6.639632 TCTGAATCTGTTTTTCAAGGGAAG 57.360 37.500 0.00 0.00 32.98 3.46
2028 2118 7.138692 AGCTTGTGAAATTCAGTGTATCTTC 57.861 36.000 0.00 0.00 0.00 2.87
2147 2240 0.036875 AGGTAAGGTGCAGAGTTGGC 59.963 55.000 0.00 0.00 0.00 4.52
2160 2253 4.336433 GCAGAGTTGGCTTCATATTGCTAA 59.664 41.667 0.00 0.00 0.00 3.09
2164 2257 9.440773 CAGAGTTGGCTTCATATTGCTAATATA 57.559 33.333 0.00 0.00 32.91 0.86
2194 2287 5.818136 TTCTTCACAACTTTGGAGAACAG 57.182 39.130 0.00 0.00 0.00 3.16
2197 2290 2.945008 TCACAACTTTGGAGAACAGCAG 59.055 45.455 0.00 0.00 0.00 4.24
2201 2294 3.281727 ACTTTGGAGAACAGCAGTTGA 57.718 42.857 0.00 0.00 38.30 3.18
2205 2298 5.127682 ACTTTGGAGAACAGCAGTTGATTTT 59.872 36.000 0.00 0.00 38.30 1.82
2208 2301 4.036734 TGGAGAACAGCAGTTGATTTTGAC 59.963 41.667 0.00 0.00 38.30 3.18
2213 2306 3.058016 ACAGCAGTTGATTTTGACGATGG 60.058 43.478 0.00 0.00 0.00 3.51
2223 2317 5.584649 TGATTTTGACGATGGTAATCCTCAC 59.415 40.000 0.00 0.00 30.50 3.51
2225 2319 4.819105 TTGACGATGGTAATCCTCACTT 57.181 40.909 0.00 0.00 30.50 3.16
2273 2367 6.037098 CACTAACAGAGTAATAGGTCAGCAC 58.963 44.000 0.00 0.00 35.64 4.40
2380 2477 9.515226 AAAAGGTAGAATGCTACTGTATTTTCA 57.485 29.630 10.81 0.00 45.10 2.69
2411 2508 5.752955 CACAACTTTGGGAAACAACAATAGG 59.247 40.000 0.00 0.00 39.19 2.57
2524 2624 4.519350 GCTGTTTACTAAGATTATGCCCCC 59.481 45.833 0.00 0.00 0.00 5.40
2573 2673 7.092354 TGTTTACTAAAGATTATGCCCCCACTA 60.092 37.037 0.00 0.00 0.00 2.74
2608 2708 1.561076 CCTCCACCAACATCCTGATGA 59.439 52.381 13.81 0.00 41.20 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.820767 CTTCCACCTCCGTCGACAGC 62.821 65.000 17.16 0.00 0.00 4.40
1 2 1.213013 CTTCCACCTCCGTCGACAG 59.787 63.158 17.16 3.99 0.00 3.51
3 4 1.507174 CTCTTCCACCTCCGTCGAC 59.493 63.158 5.18 5.18 0.00 4.20
5 6 2.711922 CCCTCTTCCACCTCCGTCG 61.712 68.421 0.00 0.00 0.00 5.12
6 7 1.305046 TCCCTCTTCCACCTCCGTC 60.305 63.158 0.00 0.00 0.00 4.79
8 9 2.060980 CCTCCCTCTTCCACCTCCG 61.061 68.421 0.00 0.00 0.00 4.63
9 10 0.689412 CTCCTCCCTCTTCCACCTCC 60.689 65.000 0.00 0.00 0.00 4.30
10 11 0.041982 ACTCCTCCCTCTTCCACCTC 59.958 60.000 0.00 0.00 0.00 3.85
11 12 0.494095 AACTCCTCCCTCTTCCACCT 59.506 55.000 0.00 0.00 0.00 4.00
12 13 0.615850 CAACTCCTCCCTCTTCCACC 59.384 60.000 0.00 0.00 0.00 4.61
13 14 0.615850 CCAACTCCTCCCTCTTCCAC 59.384 60.000 0.00 0.00 0.00 4.02
14 15 0.193574 ACCAACTCCTCCCTCTTCCA 59.806 55.000 0.00 0.00 0.00 3.53
15 16 0.615850 CACCAACTCCTCCCTCTTCC 59.384 60.000 0.00 0.00 0.00 3.46
16 17 1.645710 TCACCAACTCCTCCCTCTTC 58.354 55.000 0.00 0.00 0.00 2.87
17 18 1.700186 GTTCACCAACTCCTCCCTCTT 59.300 52.381 0.00 0.00 0.00 2.85
18 19 1.353091 GTTCACCAACTCCTCCCTCT 58.647 55.000 0.00 0.00 0.00 3.69
19 20 0.037232 CGTTCACCAACTCCTCCCTC 60.037 60.000 0.00 0.00 0.00 4.30
20 21 0.763223 ACGTTCACCAACTCCTCCCT 60.763 55.000 0.00 0.00 0.00 4.20
21 22 0.320508 GACGTTCACCAACTCCTCCC 60.321 60.000 0.00 0.00 0.00 4.30
22 23 0.666577 CGACGTTCACCAACTCCTCC 60.667 60.000 0.00 0.00 0.00 4.30
23 24 1.282930 GCGACGTTCACCAACTCCTC 61.283 60.000 0.00 0.00 0.00 3.71
24 25 1.300697 GCGACGTTCACCAACTCCT 60.301 57.895 0.00 0.00 0.00 3.69
25 26 2.654912 CGCGACGTTCACCAACTCC 61.655 63.158 0.00 0.00 0.00 3.85
26 27 2.844146 CGCGACGTTCACCAACTC 59.156 61.111 0.00 0.00 0.00 3.01
27 28 3.335534 GCGCGACGTTCACCAACT 61.336 61.111 12.10 0.00 0.00 3.16
28 29 4.696172 CGCGCGACGTTCACCAAC 62.696 66.667 28.94 0.00 36.87 3.77
45 46 3.554692 CGGACATGAAGCGGACGC 61.555 66.667 8.91 8.91 42.33 5.19
46 47 2.126071 ACGGACATGAAGCGGACG 60.126 61.111 0.00 0.00 0.00 4.79
47 48 2.740714 GCACGGACATGAAGCGGAC 61.741 63.158 0.00 0.00 0.00 4.79
48 49 2.434185 GCACGGACATGAAGCGGA 60.434 61.111 0.00 0.00 0.00 5.54
49 50 3.499737 GGCACGGACATGAAGCGG 61.500 66.667 0.00 0.00 0.00 5.52
64 65 3.100862 GAGCCTCATTTGCGTCGGC 62.101 63.158 0.00 0.00 40.99 5.54
65 66 1.298157 TTGAGCCTCATTTGCGTCGG 61.298 55.000 0.00 0.00 0.00 4.79
66 67 0.516877 TTTGAGCCTCATTTGCGTCG 59.483 50.000 0.00 0.00 0.00 5.12
67 68 2.927553 ATTTGAGCCTCATTTGCGTC 57.072 45.000 0.00 0.00 0.00 5.19
68 69 3.319755 CAAATTTGAGCCTCATTTGCGT 58.680 40.909 13.08 0.00 0.00 5.24
69 70 2.669434 CCAAATTTGAGCCTCATTTGCG 59.331 45.455 19.86 5.53 29.56 4.85
70 71 3.681417 GTCCAAATTTGAGCCTCATTTGC 59.319 43.478 19.86 0.86 29.56 3.68
71 72 4.248058 GGTCCAAATTTGAGCCTCATTTG 58.752 43.478 19.86 11.98 30.31 2.32
72 73 3.903090 TGGTCCAAATTTGAGCCTCATTT 59.097 39.130 19.86 0.00 0.00 2.32
73 74 3.509442 TGGTCCAAATTTGAGCCTCATT 58.491 40.909 19.86 0.00 0.00 2.57
74 75 3.094572 CTGGTCCAAATTTGAGCCTCAT 58.905 45.455 19.86 0.00 0.00 2.90
75 76 2.517959 CTGGTCCAAATTTGAGCCTCA 58.482 47.619 19.86 9.02 0.00 3.86
76 77 1.821136 CCTGGTCCAAATTTGAGCCTC 59.179 52.381 19.86 5.15 0.00 4.70
77 78 1.428912 TCCTGGTCCAAATTTGAGCCT 59.571 47.619 19.86 0.00 0.00 4.58
78 79 1.923356 TCCTGGTCCAAATTTGAGCC 58.077 50.000 19.86 18.87 0.00 4.70
79 80 3.368739 CCATTCCTGGTCCAAATTTGAGC 60.369 47.826 19.86 14.42 37.79 4.26
80 81 3.196254 CCCATTCCTGGTCCAAATTTGAG 59.804 47.826 19.86 8.53 41.37 3.02
81 82 3.172339 CCCATTCCTGGTCCAAATTTGA 58.828 45.455 19.86 3.14 41.37 2.69
82 83 2.905736 ACCCATTCCTGGTCCAAATTTG 59.094 45.455 11.40 11.40 41.37 2.32
83 84 3.173151 GACCCATTCCTGGTCCAAATTT 58.827 45.455 0.00 0.00 45.38 1.82
84 85 2.820178 GACCCATTCCTGGTCCAAATT 58.180 47.619 0.00 0.00 45.38 1.82
85 86 2.532250 GACCCATTCCTGGTCCAAAT 57.468 50.000 0.00 0.00 45.38 2.32
91 92 2.933287 TGCCGACCCATTCCTGGT 60.933 61.111 0.00 0.00 41.37 4.00
92 93 2.124570 CTGCCGACCCATTCCTGG 60.125 66.667 0.00 0.00 42.73 4.45
93 94 2.124570 CCTGCCGACCCATTCCTG 60.125 66.667 0.00 0.00 0.00 3.86
94 95 4.115199 GCCTGCCGACCCATTCCT 62.115 66.667 0.00 0.00 0.00 3.36
96 97 4.467084 TCGCCTGCCGACCCATTC 62.467 66.667 0.00 0.00 41.89 2.67
103 104 2.280254 TTTTCGTTCGCCTGCCGA 60.280 55.556 0.00 0.00 45.77 5.54
104 105 2.173382 CTTTTCGTTCGCCTGCCG 59.827 61.111 0.00 0.00 38.61 5.69
105 106 2.126850 GCTTTTCGTTCGCCTGCC 60.127 61.111 0.00 0.00 0.00 4.85
106 107 2.499732 CGCTTTTCGTTCGCCTGC 60.500 61.111 0.00 0.00 0.00 4.85
107 108 1.635663 ATCCGCTTTTCGTTCGCCTG 61.636 55.000 0.00 0.00 36.19 4.85
108 109 1.375523 ATCCGCTTTTCGTTCGCCT 60.376 52.632 0.00 0.00 36.19 5.52
109 110 1.226018 CATCCGCTTTTCGTTCGCC 60.226 57.895 0.00 0.00 36.19 5.54
110 111 1.863446 GCATCCGCTTTTCGTTCGC 60.863 57.895 0.00 0.00 36.19 4.70
111 112 0.789383 GTGCATCCGCTTTTCGTTCG 60.789 55.000 0.00 0.00 39.64 3.95
112 113 0.789383 CGTGCATCCGCTTTTCGTTC 60.789 55.000 0.00 0.00 39.64 3.95
113 114 1.206578 CGTGCATCCGCTTTTCGTT 59.793 52.632 0.00 0.00 39.64 3.85
114 115 1.503818 AACGTGCATCCGCTTTTCGT 61.504 50.000 0.00 0.00 39.64 3.85
115 116 0.385473 AAACGTGCATCCGCTTTTCG 60.385 50.000 0.00 0.00 39.64 3.46
116 117 1.052287 CAAACGTGCATCCGCTTTTC 58.948 50.000 0.00 0.00 39.64 2.29
117 118 0.383949 ACAAACGTGCATCCGCTTTT 59.616 45.000 0.00 0.00 39.64 2.27
118 119 0.383949 AACAAACGTGCATCCGCTTT 59.616 45.000 0.00 0.00 39.64 3.51
119 120 0.383949 AAACAAACGTGCATCCGCTT 59.616 45.000 0.00 0.00 39.64 4.68
120 121 0.317770 CAAACAAACGTGCATCCGCT 60.318 50.000 0.00 0.00 39.64 5.52
121 122 1.274798 CCAAACAAACGTGCATCCGC 61.275 55.000 0.00 0.00 39.24 5.54
122 123 0.662970 CCCAAACAAACGTGCATCCG 60.663 55.000 0.00 0.00 0.00 4.18
123 124 0.387565 ACCCAAACAAACGTGCATCC 59.612 50.000 0.00 0.00 0.00 3.51
124 125 1.766069 GACCCAAACAAACGTGCATC 58.234 50.000 0.00 0.00 0.00 3.91
125 126 0.030101 CGACCCAAACAAACGTGCAT 59.970 50.000 0.00 0.00 0.00 3.96
126 127 1.429825 CGACCCAAACAAACGTGCA 59.570 52.632 0.00 0.00 0.00 4.57
127 128 1.298788 CCGACCCAAACAAACGTGC 60.299 57.895 0.00 0.00 0.00 5.34
128 129 1.298788 GCCGACCCAAACAAACGTG 60.299 57.895 0.00 0.00 0.00 4.49
129 130 2.825975 CGCCGACCCAAACAAACGT 61.826 57.895 0.00 0.00 0.00 3.99
130 131 2.051703 CGCCGACCCAAACAAACG 60.052 61.111 0.00 0.00 0.00 3.60
131 132 2.354188 GCGCCGACCCAAACAAAC 60.354 61.111 0.00 0.00 0.00 2.93
132 133 3.955101 CGCGCCGACCCAAACAAA 61.955 61.111 0.00 0.00 0.00 2.83
135 136 4.676586 CAACGCGCCGACCCAAAC 62.677 66.667 5.73 0.00 0.00 2.93
148 149 2.983592 AGAAAAGGCGGCCCAACG 60.984 61.111 17.02 0.00 0.00 4.10
149 150 2.142357 GACAGAAAAGGCGGCCCAAC 62.142 60.000 17.02 5.20 0.00 3.77
150 151 1.901464 GACAGAAAAGGCGGCCCAA 60.901 57.895 17.02 0.00 0.00 4.12
151 152 2.282180 GACAGAAAAGGCGGCCCA 60.282 61.111 17.02 0.00 0.00 5.36
152 153 3.062466 GGACAGAAAAGGCGGCCC 61.062 66.667 17.02 0.00 0.00 5.80
153 154 3.431725 CGGACAGAAAAGGCGGCC 61.432 66.667 12.11 12.11 0.00 6.13
154 155 4.103103 GCGGACAGAAAAGGCGGC 62.103 66.667 0.00 0.00 0.00 6.53
155 156 3.788766 CGCGGACAGAAAAGGCGG 61.789 66.667 0.00 0.00 42.86 6.13
157 158 2.861006 GTCGCGGACAGAAAAGGC 59.139 61.111 6.13 0.00 32.09 4.35
158 159 0.736325 ATCGTCGCGGACAGAAAAGG 60.736 55.000 6.13 0.00 32.09 3.11
159 160 0.640768 GATCGTCGCGGACAGAAAAG 59.359 55.000 6.13 0.00 32.09 2.27
160 161 0.734942 GGATCGTCGCGGACAGAAAA 60.735 55.000 6.13 0.00 32.09 2.29
161 162 1.153901 GGATCGTCGCGGACAGAAA 60.154 57.895 6.13 0.00 32.09 2.52
162 163 1.868987 TTGGATCGTCGCGGACAGAA 61.869 55.000 6.13 0.00 32.09 3.02
163 164 1.868987 TTTGGATCGTCGCGGACAGA 61.869 55.000 6.13 0.75 32.09 3.41
164 165 1.445410 TTTGGATCGTCGCGGACAG 60.445 57.895 6.13 0.00 32.09 3.51
165 166 1.735198 GTTTGGATCGTCGCGGACA 60.735 57.895 6.13 0.00 32.09 4.02
166 167 2.785105 CGTTTGGATCGTCGCGGAC 61.785 63.158 6.13 2.05 0.00 4.79
167 168 2.505337 CGTTTGGATCGTCGCGGA 60.505 61.111 6.13 0.00 0.00 5.54
168 169 3.550992 CCGTTTGGATCGTCGCGG 61.551 66.667 6.13 3.67 37.49 6.46
169 170 2.505337 TCCGTTTGGATCGTCGCG 60.505 61.111 0.00 0.00 40.17 5.87
185 186 3.475774 ATTTCGTCCGCGCGTGTC 61.476 61.111 29.95 16.67 38.14 3.67
186 187 3.773630 CATTTCGTCCGCGCGTGT 61.774 61.111 29.95 2.95 38.14 4.49
187 188 3.406060 CTCATTTCGTCCGCGCGTG 62.406 63.158 29.95 19.95 38.14 5.34
188 189 3.179265 CTCATTTCGTCCGCGCGT 61.179 61.111 29.95 4.74 38.14 6.01
189 190 3.126722 GACTCATTTCGTCCGCGCG 62.127 63.158 25.67 25.67 38.14 6.86
190 191 1.805945 AGACTCATTTCGTCCGCGC 60.806 57.895 0.00 0.00 38.14 6.86
191 192 1.991430 CAGACTCATTTCGTCCGCG 59.009 57.895 0.00 0.00 39.92 6.46
192 193 1.710339 GCAGACTCATTTCGTCCGC 59.290 57.895 0.00 0.00 31.83 5.54
193 194 1.991430 CGCAGACTCATTTCGTCCG 59.009 57.895 0.00 0.00 31.83 4.79
194 195 1.710339 GCGCAGACTCATTTCGTCC 59.290 57.895 0.30 0.00 31.83 4.79
195 196 1.341802 CGCGCAGACTCATTTCGTC 59.658 57.895 8.75 0.00 0.00 4.20
196 197 0.944311 AACGCGCAGACTCATTTCGT 60.944 50.000 5.73 0.00 0.00 3.85
197 198 0.517132 CAACGCGCAGACTCATTTCG 60.517 55.000 5.73 0.00 0.00 3.46
198 199 0.179215 CCAACGCGCAGACTCATTTC 60.179 55.000 5.73 0.00 0.00 2.17
199 200 0.602638 TCCAACGCGCAGACTCATTT 60.603 50.000 5.73 0.00 0.00 2.32
200 201 1.005037 TCCAACGCGCAGACTCATT 60.005 52.632 5.73 0.00 0.00 2.57
201 202 1.446792 CTCCAACGCGCAGACTCAT 60.447 57.895 5.73 0.00 0.00 2.90
202 203 2.049156 CTCCAACGCGCAGACTCA 60.049 61.111 5.73 0.00 0.00 3.41
203 204 1.664965 AACTCCAACGCGCAGACTC 60.665 57.895 5.73 0.00 0.00 3.36
204 205 1.956170 CAACTCCAACGCGCAGACT 60.956 57.895 5.73 0.00 0.00 3.24
205 206 2.551270 CAACTCCAACGCGCAGAC 59.449 61.111 5.73 0.00 0.00 3.51
206 207 3.345808 GCAACTCCAACGCGCAGA 61.346 61.111 5.73 0.00 0.00 4.26
207 208 3.300667 GAGCAACTCCAACGCGCAG 62.301 63.158 5.73 2.42 0.00 5.18
208 209 3.345808 GAGCAACTCCAACGCGCA 61.346 61.111 5.73 0.00 0.00 6.09
209 210 3.016474 GAGAGCAACTCCAACGCGC 62.016 63.158 5.73 0.00 39.53 6.86
210 211 1.016130 ATGAGAGCAACTCCAACGCG 61.016 55.000 3.53 3.53 44.34 6.01
211 212 0.445436 CATGAGAGCAACTCCAACGC 59.555 55.000 8.13 0.00 44.34 4.84
212 213 1.081892 CCATGAGAGCAACTCCAACG 58.918 55.000 0.00 0.00 44.34 4.10
213 214 0.807496 GCCATGAGAGCAACTCCAAC 59.193 55.000 0.00 0.00 44.34 3.77
214 215 0.322816 GGCCATGAGAGCAACTCCAA 60.323 55.000 0.00 0.00 44.34 3.53
215 216 1.203441 AGGCCATGAGAGCAACTCCA 61.203 55.000 5.01 0.00 44.34 3.86
216 217 0.463474 GAGGCCATGAGAGCAACTCC 60.463 60.000 5.01 0.00 44.34 3.85
217 218 0.540923 AGAGGCCATGAGAGCAACTC 59.459 55.000 5.01 4.35 45.11 3.01
218 219 1.871418 TAGAGGCCATGAGAGCAACT 58.129 50.000 5.01 0.00 0.00 3.16
219 220 2.698855 TTAGAGGCCATGAGAGCAAC 57.301 50.000 5.01 0.00 0.00 4.17
220 221 2.840038 TCTTTAGAGGCCATGAGAGCAA 59.160 45.455 5.01 0.00 0.00 3.91
221 222 2.169352 GTCTTTAGAGGCCATGAGAGCA 59.831 50.000 5.01 0.00 0.00 4.26
222 223 2.801342 CGTCTTTAGAGGCCATGAGAGC 60.801 54.545 5.01 0.00 0.00 4.09
223 224 2.690497 TCGTCTTTAGAGGCCATGAGAG 59.310 50.000 5.01 0.00 0.00 3.20
224 225 2.427453 GTCGTCTTTAGAGGCCATGAGA 59.573 50.000 5.01 0.00 0.00 3.27
225 226 2.166459 TGTCGTCTTTAGAGGCCATGAG 59.834 50.000 5.01 0.00 0.00 2.90
226 227 2.176045 TGTCGTCTTTAGAGGCCATGA 58.824 47.619 5.01 0.00 0.00 3.07
227 228 2.672961 TGTCGTCTTTAGAGGCCATG 57.327 50.000 5.01 0.00 0.00 3.66
228 229 2.567615 ACTTGTCGTCTTTAGAGGCCAT 59.432 45.455 5.01 0.00 0.00 4.40
229 230 1.968493 ACTTGTCGTCTTTAGAGGCCA 59.032 47.619 5.01 0.00 0.00 5.36
230 231 2.338500 CACTTGTCGTCTTTAGAGGCC 58.662 52.381 0.00 0.00 0.00 5.19
231 232 2.288886 ACCACTTGTCGTCTTTAGAGGC 60.289 50.000 0.00 0.00 0.00 4.70
232 233 3.005472 TCACCACTTGTCGTCTTTAGAGG 59.995 47.826 0.00 0.00 0.00 3.69
233 234 4.230657 CTCACCACTTGTCGTCTTTAGAG 58.769 47.826 0.00 0.00 0.00 2.43
234 235 3.005472 CCTCACCACTTGTCGTCTTTAGA 59.995 47.826 0.00 0.00 0.00 2.10
235 236 3.005472 TCCTCACCACTTGTCGTCTTTAG 59.995 47.826 0.00 0.00 0.00 1.85
236 237 2.960384 TCCTCACCACTTGTCGTCTTTA 59.040 45.455 0.00 0.00 0.00 1.85
237 238 1.760613 TCCTCACCACTTGTCGTCTTT 59.239 47.619 0.00 0.00 0.00 2.52
238 239 1.410004 TCCTCACCACTTGTCGTCTT 58.590 50.000 0.00 0.00 0.00 3.01
239 240 1.273606 CATCCTCACCACTTGTCGTCT 59.726 52.381 0.00 0.00 0.00 4.18
240 241 1.272490 TCATCCTCACCACTTGTCGTC 59.728 52.381 0.00 0.00 0.00 4.20
241 242 1.000955 GTCATCCTCACCACTTGTCGT 59.999 52.381 0.00 0.00 0.00 4.34
242 243 1.714794 GTCATCCTCACCACTTGTCG 58.285 55.000 0.00 0.00 0.00 4.35
243 244 1.673033 CCGTCATCCTCACCACTTGTC 60.673 57.143 0.00 0.00 0.00 3.18
244 245 0.321671 CCGTCATCCTCACCACTTGT 59.678 55.000 0.00 0.00 0.00 3.16
245 246 0.321671 ACCGTCATCCTCACCACTTG 59.678 55.000 0.00 0.00 0.00 3.16
246 247 1.056660 AACCGTCATCCTCACCACTT 58.943 50.000 0.00 0.00 0.00 3.16
247 248 0.321671 CAACCGTCATCCTCACCACT 59.678 55.000 0.00 0.00 0.00 4.00
248 249 0.034896 ACAACCGTCATCCTCACCAC 59.965 55.000 0.00 0.00 0.00 4.16
249 250 1.548719 CTACAACCGTCATCCTCACCA 59.451 52.381 0.00 0.00 0.00 4.17
250 251 1.822990 TCTACAACCGTCATCCTCACC 59.177 52.381 0.00 0.00 0.00 4.02
251 252 3.587797 TTCTACAACCGTCATCCTCAC 57.412 47.619 0.00 0.00 0.00 3.51
252 253 4.221924 TGATTTCTACAACCGTCATCCTCA 59.778 41.667 0.00 0.00 0.00 3.86
253 254 4.755411 TGATTTCTACAACCGTCATCCTC 58.245 43.478 0.00 0.00 0.00 3.71
254 255 4.223032 ACTGATTTCTACAACCGTCATCCT 59.777 41.667 0.00 0.00 0.00 3.24
255 256 4.504858 ACTGATTTCTACAACCGTCATCC 58.495 43.478 0.00 0.00 0.00 3.51
256 257 5.671329 GCAACTGATTTCTACAACCGTCATC 60.671 44.000 0.00 0.00 0.00 2.92
257 258 4.154195 GCAACTGATTTCTACAACCGTCAT 59.846 41.667 0.00 0.00 0.00 3.06
258 259 3.496884 GCAACTGATTTCTACAACCGTCA 59.503 43.478 0.00 0.00 0.00 4.35
259 260 3.496884 TGCAACTGATTTCTACAACCGTC 59.503 43.478 0.00 0.00 0.00 4.79
260 261 3.472652 TGCAACTGATTTCTACAACCGT 58.527 40.909 0.00 0.00 0.00 4.83
261 262 4.685169 ATGCAACTGATTTCTACAACCG 57.315 40.909 0.00 0.00 0.00 4.44
262 263 5.048083 TCCAATGCAACTGATTTCTACAACC 60.048 40.000 0.00 0.00 0.00 3.77
263 264 6.012658 TCCAATGCAACTGATTTCTACAAC 57.987 37.500 0.00 0.00 0.00 3.32
264 265 5.769662 ACTCCAATGCAACTGATTTCTACAA 59.230 36.000 0.00 0.00 0.00 2.41
265 266 5.316167 ACTCCAATGCAACTGATTTCTACA 58.684 37.500 0.00 0.00 0.00 2.74
266 267 5.886960 ACTCCAATGCAACTGATTTCTAC 57.113 39.130 0.00 0.00 0.00 2.59
267 268 6.899393 AAACTCCAATGCAACTGATTTCTA 57.101 33.333 0.00 0.00 0.00 2.10
268 269 5.796424 AAACTCCAATGCAACTGATTTCT 57.204 34.783 0.00 0.00 0.00 2.52
269 270 6.218746 AGAAAACTCCAATGCAACTGATTTC 58.781 36.000 0.00 0.00 0.00 2.17
270 271 6.165700 AGAAAACTCCAATGCAACTGATTT 57.834 33.333 0.00 0.00 0.00 2.17
271 272 5.796424 AGAAAACTCCAATGCAACTGATT 57.204 34.783 0.00 0.00 0.00 2.57
272 273 5.535333 CAAGAAAACTCCAATGCAACTGAT 58.465 37.500 0.00 0.00 0.00 2.90
273 274 4.737352 GCAAGAAAACTCCAATGCAACTGA 60.737 41.667 0.00 0.00 34.10 3.41
274 275 3.492011 GCAAGAAAACTCCAATGCAACTG 59.508 43.478 0.00 0.00 34.10 3.16
275 276 3.132646 TGCAAGAAAACTCCAATGCAACT 59.867 39.130 0.00 0.00 40.47 3.16
276 277 3.456280 TGCAAGAAAACTCCAATGCAAC 58.544 40.909 0.00 0.00 40.47 4.17
277 278 3.815856 TGCAAGAAAACTCCAATGCAA 57.184 38.095 0.00 0.00 40.47 4.08
278 279 3.815856 TTGCAAGAAAACTCCAATGCA 57.184 38.095 0.00 0.00 41.57 3.96
279 280 4.512571 ACATTTGCAAGAAAACTCCAATGC 59.487 37.500 0.00 0.00 0.00 3.56
280 281 6.607735 AACATTTGCAAGAAAACTCCAATG 57.392 33.333 0.00 0.00 0.00 2.82
281 282 6.598850 ACAAACATTTGCAAGAAAACTCCAAT 59.401 30.769 0.00 0.00 41.79 3.16
282 283 5.936956 ACAAACATTTGCAAGAAAACTCCAA 59.063 32.000 0.00 0.00 41.79 3.53
283 284 5.350914 CACAAACATTTGCAAGAAAACTCCA 59.649 36.000 0.00 0.00 41.79 3.86
284 285 5.220643 CCACAAACATTTGCAAGAAAACTCC 60.221 40.000 0.00 0.00 41.79 3.85
285 286 5.580297 TCCACAAACATTTGCAAGAAAACTC 59.420 36.000 0.00 0.00 41.79 3.01
286 287 5.351189 GTCCACAAACATTTGCAAGAAAACT 59.649 36.000 0.00 0.00 41.79 2.66
287 288 5.121454 TGTCCACAAACATTTGCAAGAAAAC 59.879 36.000 0.00 0.00 41.79 2.43
288 289 5.240891 TGTCCACAAACATTTGCAAGAAAA 58.759 33.333 0.00 0.00 41.79 2.29
289 290 4.825422 TGTCCACAAACATTTGCAAGAAA 58.175 34.783 0.00 0.00 41.79 2.52
290 291 4.462508 TGTCCACAAACATTTGCAAGAA 57.537 36.364 0.00 0.00 41.79 2.52
291 292 4.370049 CATGTCCACAAACATTTGCAAGA 58.630 39.130 0.00 0.00 41.79 3.02
292 293 3.059461 GCATGTCCACAAACATTTGCAAG 60.059 43.478 0.00 0.00 41.79 4.01
293 294 2.871022 GCATGTCCACAAACATTTGCAA 59.129 40.909 0.00 0.00 41.79 4.08
294 295 2.481854 GCATGTCCACAAACATTTGCA 58.518 42.857 4.25 0.00 41.79 4.08
295 296 1.456544 CGCATGTCCACAAACATTTGC 59.543 47.619 4.25 0.00 41.79 3.68
296 297 2.725723 GACGCATGTCCACAAACATTTG 59.274 45.455 2.77 2.77 37.78 2.32
297 298 2.604373 CGACGCATGTCCACAAACATTT 60.604 45.455 0.00 0.00 42.37 2.32
298 299 1.069296 CGACGCATGTCCACAAACATT 60.069 47.619 0.00 0.00 42.37 2.71
299 300 0.516877 CGACGCATGTCCACAAACAT 59.483 50.000 0.00 0.00 42.37 2.71
300 301 0.812014 ACGACGCATGTCCACAAACA 60.812 50.000 0.00 0.00 42.37 2.83
301 302 0.110823 GACGACGCATGTCCACAAAC 60.111 55.000 0.00 0.00 42.37 2.93
302 303 0.249699 AGACGACGCATGTCCACAAA 60.250 50.000 0.00 0.00 42.37 2.83
303 304 0.666274 GAGACGACGCATGTCCACAA 60.666 55.000 0.00 0.00 42.37 3.33
304 305 1.080772 GAGACGACGCATGTCCACA 60.081 57.895 0.00 0.00 42.37 4.17
305 306 0.798771 GAGAGACGACGCATGTCCAC 60.799 60.000 0.00 0.00 42.37 4.02
306 307 1.506718 GAGAGACGACGCATGTCCA 59.493 57.895 0.00 0.00 42.37 4.02
307 308 1.226717 GGAGAGACGACGCATGTCC 60.227 63.158 0.00 0.00 42.37 4.02
308 309 0.171455 AAGGAGAGACGACGCATGTC 59.829 55.000 0.00 0.00 41.91 3.06
309 310 0.603569 AAAGGAGAGACGACGCATGT 59.396 50.000 0.00 0.00 0.00 3.21
310 311 1.656095 GAAAAGGAGAGACGACGCATG 59.344 52.381 0.00 0.00 0.00 4.06
311 312 1.546476 AGAAAAGGAGAGACGACGCAT 59.454 47.619 0.00 0.00 0.00 4.73
312 313 0.959553 AGAAAAGGAGAGACGACGCA 59.040 50.000 0.00 0.00 0.00 5.24
313 314 2.067414 AAGAAAAGGAGAGACGACGC 57.933 50.000 0.00 0.00 0.00 5.19
314 315 3.639538 TGAAAGAAAAGGAGAGACGACG 58.360 45.455 0.00 0.00 0.00 5.12
315 316 4.446051 CACTGAAAGAAAAGGAGAGACGAC 59.554 45.833 0.00 0.00 37.43 4.34
316 317 4.099573 ACACTGAAAGAAAAGGAGAGACGA 59.900 41.667 0.00 0.00 37.43 4.20
317 318 4.372656 ACACTGAAAGAAAAGGAGAGACG 58.627 43.478 0.00 0.00 37.43 4.18
318 319 5.606505 AGACACTGAAAGAAAAGGAGAGAC 58.393 41.667 0.00 0.00 37.43 3.36
319 320 5.878406 AGACACTGAAAGAAAAGGAGAGA 57.122 39.130 0.00 0.00 37.43 3.10
320 321 6.934048 AAAGACACTGAAAGAAAAGGAGAG 57.066 37.500 0.00 0.00 37.43 3.20
321 322 7.703058 AAAAAGACACTGAAAGAAAAGGAGA 57.297 32.000 0.00 0.00 37.43 3.71
324 325 9.899226 CCTATAAAAAGACACTGAAAGAAAAGG 57.101 33.333 0.00 0.00 37.43 3.11
325 326 9.399403 GCCTATAAAAAGACACTGAAAGAAAAG 57.601 33.333 0.00 0.00 37.43 2.27
326 327 8.357402 GGCCTATAAAAAGACACTGAAAGAAAA 58.643 33.333 0.00 0.00 37.43 2.29
327 328 7.724061 AGGCCTATAAAAAGACACTGAAAGAAA 59.276 33.333 1.29 0.00 37.43 2.52
328 329 7.231467 AGGCCTATAAAAAGACACTGAAAGAA 58.769 34.615 1.29 0.00 37.43 2.52
329 330 6.779860 AGGCCTATAAAAAGACACTGAAAGA 58.220 36.000 1.29 0.00 37.43 2.52
330 331 7.454260 AAGGCCTATAAAAAGACACTGAAAG 57.546 36.000 5.16 0.00 42.29 2.62
331 332 7.833285 AAAGGCCTATAAAAAGACACTGAAA 57.167 32.000 5.16 0.00 0.00 2.69
332 333 7.724061 AGAAAAGGCCTATAAAAAGACACTGAA 59.276 33.333 5.16 0.00 0.00 3.02
333 334 7.231467 AGAAAAGGCCTATAAAAAGACACTGA 58.769 34.615 5.16 0.00 0.00 3.41
334 335 7.454260 AGAAAAGGCCTATAAAAAGACACTG 57.546 36.000 5.16 0.00 0.00 3.66
335 336 8.478775 AAAGAAAAGGCCTATAAAAAGACACT 57.521 30.769 5.16 0.00 0.00 3.55
336 337 8.357402 TGAAAGAAAAGGCCTATAAAAAGACAC 58.643 33.333 5.16 0.00 0.00 3.67
337 338 8.472007 TGAAAGAAAAGGCCTATAAAAAGACA 57.528 30.769 5.16 0.00 0.00 3.41
338 339 9.358872 CATGAAAGAAAAGGCCTATAAAAAGAC 57.641 33.333 5.16 0.00 0.00 3.01
339 340 8.531146 CCATGAAAGAAAAGGCCTATAAAAAGA 58.469 33.333 5.16 0.00 0.00 2.52
340 341 8.314021 ACCATGAAAGAAAAGGCCTATAAAAAG 58.686 33.333 5.16 0.00 0.00 2.27
341 342 8.201242 ACCATGAAAGAAAAGGCCTATAAAAA 57.799 30.769 5.16 0.00 0.00 1.94
342 343 7.790782 ACCATGAAAGAAAAGGCCTATAAAA 57.209 32.000 5.16 0.00 0.00 1.52
343 344 7.610865 CAACCATGAAAGAAAAGGCCTATAAA 58.389 34.615 5.16 0.00 0.00 1.40
344 345 6.350949 GCAACCATGAAAGAAAAGGCCTATAA 60.351 38.462 5.16 0.00 0.00 0.98
345 346 5.127031 GCAACCATGAAAGAAAAGGCCTATA 59.873 40.000 5.16 0.00 0.00 1.31
346 347 4.081476 GCAACCATGAAAGAAAAGGCCTAT 60.081 41.667 5.16 0.00 0.00 2.57
347 348 3.258123 GCAACCATGAAAGAAAAGGCCTA 59.742 43.478 5.16 0.00 0.00 3.93
348 349 2.037641 GCAACCATGAAAGAAAAGGCCT 59.962 45.455 0.00 0.00 0.00 5.19
349 350 2.224257 TGCAACCATGAAAGAAAAGGCC 60.224 45.455 0.00 0.00 0.00 5.19
350 351 3.110447 TGCAACCATGAAAGAAAAGGC 57.890 42.857 0.00 0.00 0.00 4.35
351 352 4.248058 GGATGCAACCATGAAAGAAAAGG 58.752 43.478 8.36 0.00 0.00 3.11
352 353 4.885413 TGGATGCAACCATGAAAGAAAAG 58.115 39.130 12.35 0.00 34.77 2.27
353 354 4.262549 CCTGGATGCAACCATGAAAGAAAA 60.263 41.667 16.95 0.00 39.34 2.29
354 355 3.258872 CCTGGATGCAACCATGAAAGAAA 59.741 43.478 16.95 0.00 39.34 2.52
355 356 2.827322 CCTGGATGCAACCATGAAAGAA 59.173 45.455 16.95 0.00 39.34 2.52
356 357 2.041485 TCCTGGATGCAACCATGAAAGA 59.959 45.455 16.95 6.02 39.34 2.52
357 358 2.449464 TCCTGGATGCAACCATGAAAG 58.551 47.619 16.95 4.18 39.34 2.62
358 359 2.601240 TCCTGGATGCAACCATGAAA 57.399 45.000 16.95 0.00 39.34 2.69
359 360 2.832643 ATCCTGGATGCAACCATGAA 57.167 45.000 21.58 9.28 37.90 2.57
360 361 4.146564 CAATATCCTGGATGCAACCATGA 58.853 43.478 20.36 20.36 39.34 3.07
361 362 3.893200 ACAATATCCTGGATGCAACCATG 59.107 43.478 16.95 13.91 39.34 3.66
362 363 4.188937 ACAATATCCTGGATGCAACCAT 57.811 40.909 16.95 4.42 39.34 3.55
363 364 3.668141 ACAATATCCTGGATGCAACCA 57.332 42.857 19.42 15.71 38.33 3.67
364 365 5.594317 AGTTTACAATATCCTGGATGCAACC 59.406 40.000 19.42 5.96 0.00 3.77
365 366 6.699575 AGTTTACAATATCCTGGATGCAAC 57.300 37.500 19.42 10.43 0.00 4.17
366 367 7.395772 TCAAAGTTTACAATATCCTGGATGCAA 59.604 33.333 19.42 0.00 0.00 4.08
367 368 6.889177 TCAAAGTTTACAATATCCTGGATGCA 59.111 34.615 19.42 0.00 0.00 3.96
368 369 7.333528 TCAAAGTTTACAATATCCTGGATGC 57.666 36.000 19.42 0.05 0.00 3.91
369 370 9.740239 CATTCAAAGTTTACAATATCCTGGATG 57.260 33.333 19.42 6.84 0.00 3.51
370 371 9.479549 ACATTCAAAGTTTACAATATCCTGGAT 57.520 29.630 14.66 14.66 0.00 3.41
371 372 8.877864 ACATTCAAAGTTTACAATATCCTGGA 57.122 30.769 0.00 0.00 0.00 3.86
372 373 9.927668 AAACATTCAAAGTTTACAATATCCTGG 57.072 29.630 0.00 0.00 37.42 4.45
376 377 9.726034 CGCAAAACATTCAAAGTTTACAATATC 57.274 29.630 0.00 0.00 38.17 1.63
377 378 9.255304 ACGCAAAACATTCAAAGTTTACAATAT 57.745 25.926 0.00 0.00 38.17 1.28
378 379 8.635877 ACGCAAAACATTCAAAGTTTACAATA 57.364 26.923 0.00 0.00 38.17 1.90
379 380 7.532682 ACGCAAAACATTCAAAGTTTACAAT 57.467 28.000 0.00 0.00 38.17 2.71
380 381 6.952935 ACGCAAAACATTCAAAGTTTACAA 57.047 29.167 0.00 0.00 38.17 2.41
381 382 6.952935 AACGCAAAACATTCAAAGTTTACA 57.047 29.167 0.00 0.00 38.17 2.41
382 383 7.213521 CACAAACGCAAAACATTCAAAGTTTAC 59.786 33.333 0.00 0.00 38.17 2.01
383 384 7.095607 ACACAAACGCAAAACATTCAAAGTTTA 60.096 29.630 0.00 0.00 38.17 2.01
384 385 6.076557 CACAAACGCAAAACATTCAAAGTTT 58.923 32.000 0.00 0.00 40.66 2.66
385 386 5.178438 ACACAAACGCAAAACATTCAAAGTT 59.822 32.000 0.00 0.00 0.00 2.66
386 387 4.688413 ACACAAACGCAAAACATTCAAAGT 59.312 33.333 0.00 0.00 0.00 2.66
387 388 5.202046 ACACAAACGCAAAACATTCAAAG 57.798 34.783 0.00 0.00 0.00 2.77
388 389 6.531594 TCATACACAAACGCAAAACATTCAAA 59.468 30.769 0.00 0.00 0.00 2.69
389 390 6.036470 TCATACACAAACGCAAAACATTCAA 58.964 32.000 0.00 0.00 0.00 2.69
390 391 5.582550 TCATACACAAACGCAAAACATTCA 58.417 33.333 0.00 0.00 0.00 2.57
391 392 5.685511 ACTCATACACAAACGCAAAACATTC 59.314 36.000 0.00 0.00 0.00 2.67
392 393 5.458452 CACTCATACACAAACGCAAAACATT 59.542 36.000 0.00 0.00 0.00 2.71
393 394 4.975502 CACTCATACACAAACGCAAAACAT 59.024 37.500 0.00 0.00 0.00 2.71
394 395 4.095036 TCACTCATACACAAACGCAAAACA 59.905 37.500 0.00 0.00 0.00 2.83
395 396 4.593157 TCACTCATACACAAACGCAAAAC 58.407 39.130 0.00 0.00 0.00 2.43
396 397 4.788201 GCTCACTCATACACAAACGCAAAA 60.788 41.667 0.00 0.00 0.00 2.44
397 398 3.303725 GCTCACTCATACACAAACGCAAA 60.304 43.478 0.00 0.00 0.00 3.68
398 399 2.223144 GCTCACTCATACACAAACGCAA 59.777 45.455 0.00 0.00 0.00 4.85
399 400 1.798223 GCTCACTCATACACAAACGCA 59.202 47.619 0.00 0.00 0.00 5.24
400 401 1.201812 CGCTCACTCATACACAAACGC 60.202 52.381 0.00 0.00 0.00 4.84
401 402 1.390123 CCGCTCACTCATACACAAACG 59.610 52.381 0.00 0.00 0.00 3.60
402 403 2.412089 GTCCGCTCACTCATACACAAAC 59.588 50.000 0.00 0.00 0.00 2.93
403 404 2.036604 TGTCCGCTCACTCATACACAAA 59.963 45.455 0.00 0.00 0.00 2.83
404 405 1.616374 TGTCCGCTCACTCATACACAA 59.384 47.619 0.00 0.00 0.00 3.33
405 406 1.253100 TGTCCGCTCACTCATACACA 58.747 50.000 0.00 0.00 0.00 3.72
406 407 2.363788 TTGTCCGCTCACTCATACAC 57.636 50.000 0.00 0.00 0.00 2.90
407 408 3.394674 TTTTGTCCGCTCACTCATACA 57.605 42.857 0.00 0.00 0.00 2.29
408 409 4.946784 ATTTTTGTCCGCTCACTCATAC 57.053 40.909 0.00 0.00 0.00 2.39
409 410 5.957842 AAATTTTTGTCCGCTCACTCATA 57.042 34.783 0.00 0.00 0.00 2.15
410 411 4.853924 AAATTTTTGTCCGCTCACTCAT 57.146 36.364 0.00 0.00 0.00 2.90
411 412 4.647424 AAAATTTTTGTCCGCTCACTCA 57.353 36.364 0.00 0.00 0.00 3.41
463 464 2.465860 TCCGCTCCATTCGAGAAAAA 57.534 45.000 0.00 0.00 41.63 1.94
464 465 2.691409 ATCCGCTCCATTCGAGAAAA 57.309 45.000 0.00 0.00 41.63 2.29
465 466 2.691409 AATCCGCTCCATTCGAGAAA 57.309 45.000 0.00 0.00 41.63 2.52
466 467 2.691409 AAATCCGCTCCATTCGAGAA 57.309 45.000 0.00 0.00 41.63 2.87
467 468 2.691409 AAAATCCGCTCCATTCGAGA 57.309 45.000 0.00 0.00 41.63 4.04
488 489 1.595976 CGCTCCGTTCGCAAAGAAAAA 60.596 47.619 0.00 0.00 41.10 1.94
493 494 2.736995 TCCGCTCCGTTCGCAAAG 60.737 61.111 0.00 0.00 0.00 2.77
495 496 1.940883 ATAGTCCGCTCCGTTCGCAA 61.941 55.000 0.00 0.00 0.00 4.85
496 497 1.096967 TATAGTCCGCTCCGTTCGCA 61.097 55.000 0.00 0.00 0.00 5.10
498 499 2.031420 TCATTATAGTCCGCTCCGTTCG 60.031 50.000 0.00 0.00 0.00 3.95
499 500 3.566523 CTCATTATAGTCCGCTCCGTTC 58.433 50.000 0.00 0.00 0.00 3.95
500 501 2.288273 GCTCATTATAGTCCGCTCCGTT 60.288 50.000 0.00 0.00 0.00 4.44
502 503 1.542030 AGCTCATTATAGTCCGCTCCG 59.458 52.381 0.00 0.00 0.00 4.63
503 504 3.669251 AAGCTCATTATAGTCCGCTCC 57.331 47.619 0.00 0.00 0.00 4.70
567 568 4.858935 GTGGAACGTGTACAGTGTTACTA 58.141 43.478 18.95 7.51 0.00 1.82
602 603 1.808343 ACTTGACCCGCCGTTAATTTC 59.192 47.619 0.00 0.00 0.00 2.17
614 615 1.902508 TGTCCAGATCAGACTTGACCC 59.097 52.381 14.73 0.00 35.83 4.46
628 629 1.557443 GCAACGAACCGAGTGTCCAG 61.557 60.000 0.00 0.00 0.00 3.86
681 689 2.285083 CCTCCTTCGACACACAAACAA 58.715 47.619 0.00 0.00 0.00 2.83
689 697 2.198304 AATGGCCCCTCCTTCGACAC 62.198 60.000 0.00 0.00 35.26 3.67
701 709 1.968540 GAGCGGCTGATAATGGCCC 60.969 63.158 7.50 0.00 45.01 5.80
702 710 2.320587 CGAGCGGCTGATAATGGCC 61.321 63.158 7.50 0.00 44.43 5.36
703 711 0.671781 ATCGAGCGGCTGATAATGGC 60.672 55.000 7.50 0.00 0.00 4.40
811 863 1.618030 GAGAGAGAGGAGCAGGGGA 59.382 63.158 0.00 0.00 0.00 4.81
814 866 1.457455 GGGGAGAGAGAGGAGCAGG 60.457 68.421 0.00 0.00 0.00 4.85
819 871 2.691779 GGACGGGGGAGAGAGAGGA 61.692 68.421 0.00 0.00 0.00 3.71
820 872 2.123640 GGACGGGGGAGAGAGAGG 60.124 72.222 0.00 0.00 0.00 3.69
849 901 4.201122 GGATCTGGCTGGCTGGGG 62.201 72.222 8.19 0.00 0.00 4.96
850 902 3.414193 TGGATCTGGCTGGCTGGG 61.414 66.667 8.19 0.00 0.00 4.45
891 943 2.165301 GCTTTGATCGGTCGACGGG 61.165 63.158 21.27 10.73 44.45 5.28
893 945 1.413767 CTGGCTTTGATCGGTCGACG 61.414 60.000 9.92 5.26 46.11 5.12
894 946 1.696832 GCTGGCTTTGATCGGTCGAC 61.697 60.000 7.13 7.13 0.00 4.20
921 973 2.807631 GATTGCTGTTGCTGGGCGTG 62.808 60.000 0.00 0.00 40.48 5.34
922 974 2.598394 ATTGCTGTTGCTGGGCGT 60.598 55.556 0.00 0.00 40.48 5.68
923 975 2.144833 TTGATTGCTGTTGCTGGGCG 62.145 55.000 0.00 0.00 40.48 6.13
924 976 0.248289 ATTGATTGCTGTTGCTGGGC 59.752 50.000 0.00 0.00 40.48 5.36
925 977 1.546923 TGATTGATTGCTGTTGCTGGG 59.453 47.619 0.00 0.00 40.48 4.45
958 1024 4.499116 AGGGGAGGTGGGGATCGG 62.499 72.222 0.00 0.00 0.00 4.18
960 1026 2.448736 GGAGGGGAGGTGGGGATC 60.449 72.222 0.00 0.00 0.00 3.36
961 1027 3.300962 TGGAGGGGAGGTGGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
962 1028 4.348495 GTGGAGGGGAGGTGGGGA 62.348 72.222 0.00 0.00 0.00 4.81
967 1033 3.120191 CCTAGGTGGAGGGGAGGT 58.880 66.667 0.00 0.00 38.35 3.85
1617 1705 3.066233 GAAGGCGTCCCTCTCGTCC 62.066 68.421 0.00 0.00 41.90 4.79
1656 1744 0.257039 AGGTGCTCCCCATGAATGAC 59.743 55.000 0.00 0.00 0.00 3.06
1816 1905 6.422776 AAAGCAAACAAGATCCTATACACG 57.577 37.500 0.00 0.00 0.00 4.49
1872 1961 1.949525 CTTGAACACCAAGTGGACTGG 59.050 52.381 3.83 0.00 45.52 4.00
1942 2032 5.221244 ACCTTGGAGCAACATCTTACAAAAC 60.221 40.000 0.00 0.00 0.00 2.43
2164 2257 8.531146 TCTCCAAAGTTGTGAAGAAAAGAAAAT 58.469 29.630 0.00 0.00 0.00 1.82
2172 2265 4.096382 GCTGTTCTCCAAAGTTGTGAAGAA 59.904 41.667 0.00 0.00 0.00 2.52
2194 2287 3.559238 ACCATCGTCAAAATCAACTGC 57.441 42.857 0.00 0.00 0.00 4.40
2197 2290 6.093495 TGAGGATTACCATCGTCAAAATCAAC 59.907 38.462 5.37 0.00 46.53 3.18
2208 2301 9.712305 AGAATTTATAAGTGAGGATTACCATCG 57.288 33.333 0.00 0.00 38.94 3.84
2245 2339 9.064706 GCTGACCTATTACTCTGTTAGTGTATA 57.935 37.037 0.00 0.00 39.39 1.47
2246 2340 7.560262 TGCTGACCTATTACTCTGTTAGTGTAT 59.440 37.037 0.00 0.00 39.39 2.29
2257 2351 3.954904 TCTCCTGTGCTGACCTATTACTC 59.045 47.826 0.00 0.00 0.00 2.59
2263 2357 3.107402 AGAATCTCCTGTGCTGACCTA 57.893 47.619 0.00 0.00 0.00 3.08
2273 2367 5.683876 TCCACTTCCTTAAGAATCTCCTG 57.316 43.478 3.36 0.00 36.50 3.86
2380 2477 6.293004 TGTTTCCCAAAGTTGTGAAGAAAT 57.707 33.333 0.00 0.00 0.00 2.17
2512 2611 3.207321 TCTTGGAATTGGGGGCATAATCT 59.793 43.478 0.00 0.00 0.00 2.40
2524 2624 5.587844 CAGAGGGAACATACTCTTGGAATTG 59.412 44.000 0.00 0.00 41.90 2.32
2573 2673 2.237392 GTGGAGGGAACATGCTCTTAGT 59.763 50.000 0.00 0.00 0.00 2.24
2608 2708 7.615365 TGCATCTGTTGTAAGGAGGATTAAAAT 59.385 33.333 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.