Multiple sequence alignment - TraesCS5D01G446600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G446600 chr5D 100.000 5328 0 0 2882 8209 496912817 496918144 0.000000e+00 9840.0
1 TraesCS5D01G446600 chr5D 100.000 2577 0 0 1 2577 496909936 496912512 0.000000e+00 4759.0
2 TraesCS5D01G446600 chr5D 96.429 168 6 0 6671 6838 496916441 496916608 2.260000e-70 278.0
3 TraesCS5D01G446600 chr5D 96.429 168 6 0 6506 6673 496916606 496916773 2.260000e-70 278.0
4 TraesCS5D01G446600 chr5D 93.836 146 9 0 6203 6348 496916093 496916238 3.860000e-53 220.0
5 TraesCS5D01G446600 chr5D 93.836 146 9 0 6158 6303 496916138 496916283 3.860000e-53 220.0
6 TraesCS5D01G446600 chr5D 90.683 161 12 1 5145 5302 496914927 496915087 2.320000e-50 211.0
7 TraesCS5D01G446600 chr5D 90.683 161 12 1 4992 5152 496915080 496915237 2.320000e-50 211.0
8 TraesCS5D01G446600 chr5D 94.872 39 2 0 6615 6653 496916365 496916403 2.470000e-05 62.1
9 TraesCS5D01G446600 chr5D 94.872 39 2 0 6430 6468 496916550 496916588 2.470000e-05 62.1
10 TraesCS5D01G446600 chr5A 94.943 3500 115 13 2882 6345 620998309 621001782 0.000000e+00 5426.0
11 TraesCS5D01G446600 chr5A 92.072 1728 88 21 816 2531 620996303 620997993 0.000000e+00 2386.0
12 TraesCS5D01G446600 chr5A 91.214 1104 47 13 6671 7761 621002446 621003512 0.000000e+00 1456.0
13 TraesCS5D01G446600 chr5A 92.946 723 29 6 1 710 620995484 620996197 0.000000e+00 1033.0
14 TraesCS5D01G446600 chr5A 97.165 388 11 0 6286 6673 621002226 621002613 0.000000e+00 656.0
15 TraesCS5D01G446600 chr5A 93.407 182 12 0 6164 6345 621001646 621001827 3.780000e-68 270.0
16 TraesCS5D01G446600 chr5A 85.433 254 13 6 7765 7994 621003691 621003944 8.230000e-60 243.0
17 TraesCS5D01G446600 chr5A 92.547 161 9 1 5145 5302 621000429 621000589 2.300000e-55 228.0
18 TraesCS5D01G446600 chr5A 91.925 161 10 1 4992 5152 621000582 621000739 1.070000e-53 222.0
19 TraesCS5D01G446600 chr5A 87.255 204 12 6 8007 8209 621004156 621004346 3.860000e-53 220.0
20 TraesCS5D01G446600 chr5A 94.872 39 2 0 6615 6653 621002370 621002408 2.470000e-05 62.1
21 TraesCS5D01G446600 chr5B 97.247 1707 44 3 3598 5302 615700784 615702489 0.000000e+00 2889.0
22 TraesCS5D01G446600 chr5B 92.784 1760 84 20 807 2532 615697506 615699256 0.000000e+00 2507.0
23 TraesCS5D01G446600 chr5B 96.750 1354 41 1 4992 6345 615702332 615703682 0.000000e+00 2254.0
24 TraesCS5D01G446600 chr5B 92.284 1594 49 22 6158 7711 615703630 615705189 0.000000e+00 2194.0
25 TraesCS5D01G446600 chr5B 93.065 721 35 6 2891 3607 615699460 615700169 0.000000e+00 1040.0
26 TraesCS5D01G446600 chr5B 92.466 730 35 10 1 710 615696716 615697445 0.000000e+00 1026.0
27 TraesCS5D01G446600 chr5B 97.143 175 5 0 6171 6345 615703553 615703727 6.230000e-76 296.0
28 TraesCS5D01G446600 chr5B 97.619 168 4 0 6506 6673 615704143 615704310 1.040000e-73 289.0
29 TraesCS5D01G446600 chr5B 93.717 191 12 0 6158 6348 615703585 615703775 3.750000e-73 287.0
30 TraesCS5D01G446600 chr5B 96.407 167 6 0 6671 6837 615703978 615704144 8.120000e-70 276.0
31 TraesCS5D01G446600 chr5B 92.547 161 9 1 4992 5152 615702482 615702639 2.300000e-55 228.0
32 TraesCS5D01G446600 chr5B 91.925 161 10 1 5145 5302 615702179 615702339 1.070000e-53 222.0
33 TraesCS5D01G446600 chr5B 93.007 143 10 0 6203 6345 615703495 615703637 8.350000e-50 209.0
34 TraesCS5D01G446600 chr5B 94.872 39 2 0 6615 6653 615703902 615703940 2.470000e-05 62.1
35 TraesCS5D01G446600 chr5B 94.595 37 2 0 6432 6468 615704254 615704290 3.200000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G446600 chr5D 496909936 496918144 8208 False 1614.120000 9840 95.164000 1 8209 10 chr5D.!!$F1 8208
1 TraesCS5D01G446600 chr5A 620995484 621004346 8862 False 1109.281818 5426 92.161727 1 8209 11 chr5A.!!$F1 8208
2 TraesCS5D01G446600 chr5B 615696716 615705189 8473 False 922.500000 2889 94.428533 1 7711 15 chr5B.!!$F1 7710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 181 0.176910 CCTTCTTCTTCCTCCTCCGC 59.823 60.000 0.00 0.00 0.00 5.54 F
737 758 0.253630 AGGCCCTCCCACCTGAATAA 60.254 55.000 0.00 0.00 34.07 1.40 F
1057 1104 0.320247 CGCTGGGAGATATGGTGAGC 60.320 60.000 0.00 0.00 0.00 4.26 F
1532 1592 0.602905 GTATACGGGCATGGAGCACC 60.603 60.000 0.00 0.00 46.72 5.01 F
1657 1717 0.675522 TGGGCGAAATCCGGAAGAAC 60.676 55.000 9.01 0.00 39.04 3.01 F
2169 2236 2.035626 GATGGTGGTGGTGGTGGG 59.964 66.667 0.00 0.00 0.00 4.61 F
3158 3239 1.032014 TGAAGAAAACTGGCCACTGC 58.968 50.000 0.00 0.00 0.00 4.40 F
3828 4567 0.760567 TCACTGACTGGTCCAGCAGT 60.761 55.000 28.78 28.78 43.69 4.40 F
4042 4782 0.036388 TGAGATCACGGTGGCCTTTC 60.036 55.000 8.50 0.00 0.00 2.62 F
5565 6457 0.247185 TTACCTGACGGGCGGTTTAG 59.753 55.000 0.00 1.63 39.10 1.85 F
6604 7999 0.107508 ATGTGCCCAATGTCGAGGAG 60.108 55.000 0.00 0.00 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1966 2033 0.039798 TCTTCGTCACCACTACGCAC 60.040 55.000 0.00 0.00 40.12 5.34 R
2058 2125 2.019249 CCACTACCATGATTGTGGCTG 58.981 52.381 7.81 0.00 43.27 4.85 R
2156 2223 2.035626 CATCCCCACCACCACCAC 59.964 66.667 0.00 0.00 0.00 4.16 R
2557 2637 2.173126 CTCCTCTCTCCATCTTGGGT 57.827 55.000 0.00 0.00 38.32 4.51 R
2932 3012 2.277317 TCATCCCATATGCATAGCCCA 58.723 47.619 12.79 0.00 0.00 5.36 R
3812 4551 0.107456 AACACTGCTGGACCAGTCAG 59.893 55.000 29.27 29.27 43.85 3.51 R
3999 4739 0.604578 ACCACATGCCACATTCTTGC 59.395 50.000 0.00 0.00 0.00 4.01 R
5565 6457 0.249657 GTCACCATCAGATCCGGAGC 60.250 60.000 13.00 13.00 0.00 4.70 R
5683 6575 3.768757 CCTGTCTCTGTCTCTTTCCTGAT 59.231 47.826 0.00 0.00 0.00 2.90 R
6630 8025 0.034767 AGCAATGCCTTCTGCTAGCA 60.035 50.000 18.22 18.22 46.92 3.49 R
7921 9719 0.721718 GACTGGATTCGAACGCCAAG 59.278 55.000 18.84 15.29 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 32 2.783135 TGAAGAACAAGGGAGCATCAC 58.217 47.619 0.00 0.00 40.51 3.06
102 106 1.732259 GTGTAGATGTTGCCGAACAGG 59.268 52.381 0.00 0.00 45.29 4.00
177 181 0.176910 CCTTCTTCTTCCTCCTCCGC 59.823 60.000 0.00 0.00 0.00 5.54
492 497 3.516558 CGAGCTTCGTACCTCGGAAGG 62.517 61.905 10.36 0.00 45.20 3.46
498 512 0.455005 CGTACCTCGGAAGGAAGACC 59.545 60.000 0.00 0.00 46.67 3.85
551 571 2.750237 GCCGTGGTGATTGGGGAC 60.750 66.667 0.00 0.00 0.00 4.46
631 651 5.087323 TGGAGAGATTTTAGGGCTATCGAT 58.913 41.667 2.16 2.16 0.00 3.59
724 745 4.423209 GGGAGTCCCTGAGGCCCT 62.423 72.222 22.04 0.00 41.34 5.19
725 746 2.766229 GGAGTCCCTGAGGCCCTC 60.766 72.222 2.98 2.98 32.76 4.30
726 747 2.766229 GAGTCCCTGAGGCCCTCC 60.766 72.222 8.62 0.00 0.00 4.30
727 748 4.423209 AGTCCCTGAGGCCCTCCC 62.423 72.222 8.62 0.00 0.00 4.30
728 749 4.741239 GTCCCTGAGGCCCTCCCA 62.741 72.222 8.62 0.00 35.39 4.37
729 750 4.741239 TCCCTGAGGCCCTCCCAC 62.741 72.222 8.62 0.00 35.39 4.61
731 752 4.748798 CCTGAGGCCCTCCCACCT 62.749 72.222 8.62 0.00 39.65 4.00
732 753 3.406200 CTGAGGCCCTCCCACCTG 61.406 72.222 8.62 0.00 36.05 4.00
733 754 3.931631 CTGAGGCCCTCCCACCTGA 62.932 68.421 8.62 0.00 36.05 3.86
734 755 2.610859 GAGGCCCTCCCACCTGAA 60.611 66.667 0.00 0.00 36.05 3.02
735 756 2.003548 GAGGCCCTCCCACCTGAAT 61.004 63.158 0.00 0.00 36.05 2.57
736 757 0.694444 GAGGCCCTCCCACCTGAATA 60.694 60.000 0.00 0.00 36.05 1.75
737 758 0.253630 AGGCCCTCCCACCTGAATAA 60.254 55.000 0.00 0.00 34.07 1.40
738 759 0.629058 GGCCCTCCCACCTGAATAAA 59.371 55.000 0.00 0.00 0.00 1.40
739 760 1.217942 GGCCCTCCCACCTGAATAAAT 59.782 52.381 0.00 0.00 0.00 1.40
740 761 2.445525 GGCCCTCCCACCTGAATAAATA 59.554 50.000 0.00 0.00 0.00 1.40
741 762 3.117284 GGCCCTCCCACCTGAATAAATAA 60.117 47.826 0.00 0.00 0.00 1.40
742 763 4.145052 GCCCTCCCACCTGAATAAATAAG 58.855 47.826 0.00 0.00 0.00 1.73
743 764 4.145052 CCCTCCCACCTGAATAAATAAGC 58.855 47.826 0.00 0.00 0.00 3.09
797 821 2.558350 CCCCAGAAAGAAAAGCCCTGAT 60.558 50.000 0.00 0.00 0.00 2.90
798 822 2.757314 CCCAGAAAGAAAAGCCCTGATC 59.243 50.000 0.00 0.00 0.00 2.92
799 823 2.757314 CCAGAAAGAAAAGCCCTGATCC 59.243 50.000 0.00 0.00 0.00 3.36
801 825 2.379907 AGAAAGAAAAGCCCTGATCCCA 59.620 45.455 0.00 0.00 0.00 4.37
803 827 1.673767 AGAAAAGCCCTGATCCCAGA 58.326 50.000 0.00 0.00 43.02 3.86
804 828 1.995542 AGAAAAGCCCTGATCCCAGAA 59.004 47.619 0.00 0.00 43.02 3.02
805 829 2.379907 AGAAAAGCCCTGATCCCAGAAA 59.620 45.455 0.00 0.00 43.02 2.52
959 1006 2.943653 GAACCTTCACCGGCGTTG 59.056 61.111 6.01 0.62 0.00 4.10
1057 1104 0.320247 CGCTGGGAGATATGGTGAGC 60.320 60.000 0.00 0.00 0.00 4.26
1066 1113 2.388563 AGATATGGTGAGCCCCCTATCT 59.611 50.000 6.64 6.64 31.11 1.98
1078 1125 2.507471 CCCCCTATCTTCTGTTGCTTCT 59.493 50.000 0.00 0.00 0.00 2.85
1084 1131 5.754406 CCTATCTTCTGTTGCTTCTCATCAG 59.246 44.000 0.00 0.00 41.60 2.90
1180 1227 4.639334 AGTGCTAGATCGCATTTCATCAT 58.361 39.130 0.00 0.00 42.62 2.45
1258 1305 6.266203 TGTTTCGTTGTTATGTGCAAATTG 57.734 33.333 0.00 0.00 0.00 2.32
1270 1317 2.796593 GTGCAAATTGTCTGTTGGAAGC 59.203 45.455 0.00 0.00 0.00 3.86
1292 1339 3.763897 CTGGAACCTTGGAGTATTTTGGG 59.236 47.826 0.00 0.00 0.00 4.12
1303 1350 5.047377 TGGAGTATTTTGGGCATGTTTTCTC 60.047 40.000 0.00 0.00 0.00 2.87
1332 1392 6.127703 TGACCTCTTGTAGATTGTAGTACTGC 60.128 42.308 5.39 4.49 0.00 4.40
1356 1416 6.381801 CACTTGTTTAGGATGTGATTGGTTC 58.618 40.000 0.00 0.00 0.00 3.62
1364 1424 6.834168 AGGATGTGATTGGTTCGTTTTTAT 57.166 33.333 0.00 0.00 0.00 1.40
1365 1425 7.931578 AGGATGTGATTGGTTCGTTTTTATA 57.068 32.000 0.00 0.00 0.00 0.98
1428 1488 3.067742 CAGGCCTTTCTTGCTATGGATTG 59.932 47.826 0.00 0.00 0.00 2.67
1461 1521 4.141135 TCAGTTGGGTATGTTTCCCTGAAA 60.141 41.667 2.65 0.00 44.84 2.69
1532 1592 0.602905 GTATACGGGCATGGAGCACC 60.603 60.000 0.00 0.00 46.72 5.01
1602 1662 2.564504 GGTTAGTACCCCGTTCTTGTCT 59.435 50.000 0.00 0.00 38.60 3.41
1650 1710 1.097547 ATCTGCTTGGGCGAAATCCG 61.098 55.000 0.00 0.00 42.25 4.18
1651 1711 2.749839 TGCTTGGGCGAAATCCGG 60.750 61.111 0.00 0.00 42.25 5.14
1657 1717 0.675522 TGGGCGAAATCCGGAAGAAC 60.676 55.000 9.01 0.00 39.04 3.01
1813 1880 6.248433 TGAAAGGTTTATTGAGAATGCCTCT 58.752 36.000 0.00 0.00 42.44 3.69
1852 1919 8.560124 AGGTAGATTGAGAATGACCTTAGATT 57.440 34.615 0.00 0.00 32.50 2.40
1891 1958 8.268850 TCTCTAAAATATTGTCAAGTCTTGCC 57.731 34.615 7.78 0.00 0.00 4.52
1966 2033 3.414700 GACGGCCGACTGTTGCAG 61.415 66.667 35.90 0.00 34.75 4.41
1996 2063 3.118920 TGGTGACGAAGAAGACTTTGACA 60.119 43.478 0.00 0.00 39.23 3.58
2058 2125 7.307493 TGATTATATCTGCAAATATGACGCC 57.693 36.000 2.64 0.00 0.00 5.68
2151 2218 6.203530 ACGATGATGGTGATGATATTGACAAC 59.796 38.462 0.00 0.00 0.00 3.32
2156 2223 4.815846 TGGTGATGATATTGACAACGATGG 59.184 41.667 0.00 0.00 0.00 3.51
2169 2236 2.035626 GATGGTGGTGGTGGTGGG 59.964 66.667 0.00 0.00 0.00 4.61
2342 2411 9.887629 TTGAATTTGCAAACATCACCAATATAT 57.112 25.926 22.42 0.00 0.00 0.86
2523 2603 3.994392 TCGATTTGTCTTAGTCAAGTGGC 59.006 43.478 0.00 0.00 33.20 5.01
2532 2612 8.856153 TGTCTTAGTCAAGTGGCATTAATTAA 57.144 30.769 0.00 0.00 33.20 1.40
2533 2613 9.461312 TGTCTTAGTCAAGTGGCATTAATTAAT 57.539 29.630 4.81 4.81 33.20 1.40
2567 2647 6.405278 AGTTTTTCAACTAACCCAAGATGG 57.595 37.500 0.00 0.00 41.81 3.51
2568 2648 6.133356 AGTTTTTCAACTAACCCAAGATGGA 58.867 36.000 0.00 0.00 41.81 3.41
2569 2649 6.265422 AGTTTTTCAACTAACCCAAGATGGAG 59.735 38.462 0.00 0.00 41.81 3.86
2570 2650 5.576563 TTTCAACTAACCCAAGATGGAGA 57.423 39.130 0.00 0.00 40.96 3.71
2571 2651 4.826274 TCAACTAACCCAAGATGGAGAG 57.174 45.455 0.00 0.00 40.96 3.20
2572 2652 4.425772 TCAACTAACCCAAGATGGAGAGA 58.574 43.478 0.00 0.00 40.96 3.10
2573 2653 4.467795 TCAACTAACCCAAGATGGAGAGAG 59.532 45.833 0.00 0.00 40.96 3.20
2574 2654 3.379452 ACTAACCCAAGATGGAGAGAGG 58.621 50.000 0.00 0.00 40.96 3.69
2575 2655 2.649742 AACCCAAGATGGAGAGAGGA 57.350 50.000 0.00 0.00 40.96 3.71
2576 2656 2.173126 ACCCAAGATGGAGAGAGGAG 57.827 55.000 0.00 0.00 40.96 3.69
2976 3056 3.252215 TGTGGCACTTCGTCCAAAATAAG 59.748 43.478 19.83 0.00 33.57 1.73
3019 3099 5.751028 GTGAGCTACAGATTCATAGGACAAC 59.249 44.000 0.00 0.00 0.00 3.32
3042 3122 1.522668 TCATGTGGACGCAAAGGAAG 58.477 50.000 0.00 0.00 0.00 3.46
3105 3186 8.083828 ACACTAGAAGATATCATTCTGTTGGT 57.916 34.615 19.40 12.72 37.56 3.67
3158 3239 1.032014 TGAAGAAAACTGGCCACTGC 58.968 50.000 0.00 0.00 0.00 4.40
3187 3268 6.639632 TGAGGGCTATCAATTTCTATTTGC 57.360 37.500 0.00 0.00 0.00 3.68
3313 3422 3.992643 TGGAGCAATTTGTGTTTCATGG 58.007 40.909 0.00 0.00 0.00 3.66
3345 3454 4.121317 CTGTCGTAACCAACTGTAACCAA 58.879 43.478 0.00 0.00 0.00 3.67
3470 3581 1.229177 GCATGGTTGGGGGAGGTTT 60.229 57.895 0.00 0.00 0.00 3.27
3756 4495 7.281999 CAGAGAAAAAGATGGAAGGGAATCTAC 59.718 40.741 0.00 0.00 32.79 2.59
3812 4551 7.432059 ACTACAGGTAGTTACAAAGTTCTCAC 58.568 38.462 6.29 0.00 43.35 3.51
3828 4567 0.760567 TCACTGACTGGTCCAGCAGT 60.761 55.000 28.78 28.78 43.69 4.40
4031 4771 3.568538 GCATGTGGTTTGTTGAGATCAC 58.431 45.455 0.00 0.00 0.00 3.06
4042 4782 0.036388 TGAGATCACGGTGGCCTTTC 60.036 55.000 8.50 0.00 0.00 2.62
4178 4919 4.002906 TGTGTTCATCCTGTGTCTTACC 57.997 45.455 0.00 0.00 0.00 2.85
4223 4965 6.718454 AGTTCCTTGATGTCTTCATTCACATT 59.282 34.615 0.00 0.00 33.22 2.71
4303 5045 3.181505 CGTGGCTATGATCCTCGAGTATC 60.182 52.174 12.31 11.52 41.52 2.24
4347 5089 3.386402 CCTCTAACCATCTCTGTCCCTTC 59.614 52.174 0.00 0.00 0.00 3.46
4382 5124 6.787085 ACCTTCGTGATTCTAGTTCTTTTG 57.213 37.500 0.00 0.00 0.00 2.44
4508 5250 1.308069 TGGAGCTTGCGAATTGGAGC 61.308 55.000 0.00 0.00 35.42 4.70
4609 5351 1.529244 AGAACTTTGGCTTGCGGCT 60.529 52.632 0.00 0.00 41.46 5.52
4641 5383 5.124457 GCTGTCCAGTGTCATATCACAAAAT 59.876 40.000 0.00 0.00 40.37 1.82
5016 5758 4.517453 CCAAATAAAGTCAACTCCCGTTCA 59.483 41.667 0.00 0.00 0.00 3.18
5096 5838 6.542821 AGGAAAATGAACACTGATCAAGGTA 58.457 36.000 0.00 0.00 0.00 3.08
5160 6052 5.990668 AGAAGCCGACCAGATAAAGTTAAT 58.009 37.500 0.00 0.00 0.00 1.40
5217 6109 6.751514 TGCTAAGAAAACAAAAGTGACTGA 57.248 33.333 0.00 0.00 0.00 3.41
5401 6293 5.116983 CCGTTTAAATCAAGCACACAATGAC 59.883 40.000 0.00 0.00 0.00 3.06
5471 6363 3.710209 ACACCAAATCTGGAGAAGAGG 57.290 47.619 0.00 0.00 46.92 3.69
5565 6457 0.247185 TTACCTGACGGGCGGTTTAG 59.753 55.000 0.00 1.63 39.10 1.85
5599 6491 1.002087 GGTGACCGAGAAGTTGATGGT 59.998 52.381 0.00 0.00 35.14 3.55
5680 6572 7.522073 GCAACAGGAATTGATACTTCAAGTGAA 60.522 37.037 0.00 0.00 44.75 3.18
5683 6575 8.912988 ACAGGAATTGATACTTCAAGTGAAAAA 58.087 29.630 0.00 0.00 44.75 1.94
5843 6735 3.062763 ACAGATGCTCGTCAAAGTTCTG 58.937 45.455 0.00 0.00 36.02 3.02
5844 6736 3.243873 ACAGATGCTCGTCAAAGTTCTGA 60.244 43.478 12.27 0.00 34.97 3.27
6407 7802 6.715264 ACTTCCTTCTGGTAATTTTGGTACTG 59.285 38.462 0.00 0.00 34.23 2.74
6485 7880 5.519263 GGTTCCCCTCCATATCAGAGATCTA 60.519 48.000 0.00 0.00 32.86 1.98
6599 7994 1.425031 CACGATGTGCCCAATGTCG 59.575 57.895 0.00 0.00 38.21 4.35
6600 7995 1.018752 CACGATGTGCCCAATGTCGA 61.019 55.000 0.00 0.00 36.28 4.20
6601 7996 0.740868 ACGATGTGCCCAATGTCGAG 60.741 55.000 0.00 0.00 36.28 4.04
6602 7997 1.431488 CGATGTGCCCAATGTCGAGG 61.431 60.000 0.00 0.00 34.46 4.63
6603 7998 0.107703 GATGTGCCCAATGTCGAGGA 60.108 55.000 0.00 0.00 0.00 3.71
6604 7999 0.107508 ATGTGCCCAATGTCGAGGAG 60.108 55.000 0.00 0.00 0.00 3.69
6605 8000 1.296715 GTGCCCAATGTCGAGGAGT 59.703 57.895 0.00 0.00 0.00 3.85
6606 8001 0.535335 GTGCCCAATGTCGAGGAGTA 59.465 55.000 0.00 0.00 0.00 2.59
6607 8002 0.535335 TGCCCAATGTCGAGGAGTAC 59.465 55.000 0.00 0.00 0.00 2.73
6608 8003 0.535335 GCCCAATGTCGAGGAGTACA 59.465 55.000 0.00 0.00 0.00 2.90
6609 8004 1.739371 GCCCAATGTCGAGGAGTACAC 60.739 57.143 0.00 0.00 0.00 2.90
6610 8005 1.825474 CCCAATGTCGAGGAGTACACT 59.175 52.381 0.00 0.00 0.00 3.55
6611 8006 2.417379 CCCAATGTCGAGGAGTACACTG 60.417 54.545 0.00 0.00 0.00 3.66
6612 8007 2.417379 CCAATGTCGAGGAGTACACTGG 60.417 54.545 0.00 0.00 36.74 4.00
6613 8008 2.217510 ATGTCGAGGAGTACACTGGT 57.782 50.000 0.00 0.00 0.00 4.00
6614 8009 1.531423 TGTCGAGGAGTACACTGGTC 58.469 55.000 0.00 0.00 0.00 4.02
6615 8010 0.447011 GTCGAGGAGTACACTGGTCG 59.553 60.000 0.00 0.10 32.18 4.79
6616 8011 0.322648 TCGAGGAGTACACTGGTCGA 59.677 55.000 8.04 8.04 35.61 4.20
6617 8012 0.447011 CGAGGAGTACACTGGTCGAC 59.553 60.000 7.13 7.13 32.46 4.20
6618 8013 0.810016 GAGGAGTACACTGGTCGACC 59.190 60.000 28.17 28.17 0.00 4.79
6619 8014 0.111832 AGGAGTACACTGGTCGACCA 59.888 55.000 34.13 34.13 45.30 4.02
6620 8015 0.243095 GGAGTACACTGGTCGACCAC 59.757 60.000 33.23 22.23 42.01 4.16
6621 8016 1.245732 GAGTACACTGGTCGACCACT 58.754 55.000 33.23 26.48 42.01 4.00
6622 8017 0.959553 AGTACACTGGTCGACCACTG 59.040 55.000 33.23 31.89 42.01 3.66
6623 8018 0.956633 GTACACTGGTCGACCACTGA 59.043 55.000 36.11 22.87 42.01 3.41
6624 8019 1.338973 GTACACTGGTCGACCACTGAA 59.661 52.381 36.11 20.97 42.01 3.02
6625 8020 1.048601 ACACTGGTCGACCACTGAAT 58.951 50.000 36.11 20.65 42.01 2.57
6626 8021 2.244695 ACACTGGTCGACCACTGAATA 58.755 47.619 36.11 17.28 42.01 1.75
6627 8022 2.832129 ACACTGGTCGACCACTGAATAT 59.168 45.455 36.11 19.81 42.01 1.28
6628 8023 3.190079 CACTGGTCGACCACTGAATATG 58.810 50.000 33.23 21.98 42.01 1.78
6629 8024 2.168521 ACTGGTCGACCACTGAATATGG 59.831 50.000 33.23 21.27 42.01 2.74
6637 8032 3.198409 CCACTGAATATGGTGCTAGCA 57.802 47.619 14.93 14.93 32.08 3.49
6638 8033 3.136763 CCACTGAATATGGTGCTAGCAG 58.863 50.000 20.03 5.40 32.08 4.24
6639 8034 3.181462 CCACTGAATATGGTGCTAGCAGA 60.181 47.826 20.03 8.39 32.08 4.26
6640 8035 4.445453 CACTGAATATGGTGCTAGCAGAA 58.555 43.478 20.03 9.92 0.00 3.02
6641 8036 4.510711 CACTGAATATGGTGCTAGCAGAAG 59.489 45.833 20.03 9.16 0.00 2.85
6642 8037 4.063689 CTGAATATGGTGCTAGCAGAAGG 58.936 47.826 20.03 0.00 0.00 3.46
6643 8038 2.557920 ATATGGTGCTAGCAGAAGGC 57.442 50.000 20.03 5.60 45.30 4.35
6652 8047 3.204418 GCAGAAGGCATTGCTCCC 58.796 61.111 8.82 0.00 43.97 4.30
6653 8048 2.768492 GCAGAAGGCATTGCTCCCG 61.768 63.158 8.82 0.00 43.97 5.14
6654 8049 1.377725 CAGAAGGCATTGCTCCCGT 60.378 57.895 8.82 0.00 0.00 5.28
6655 8050 0.962356 CAGAAGGCATTGCTCCCGTT 60.962 55.000 8.82 0.00 0.00 4.44
6656 8051 0.618458 AGAAGGCATTGCTCCCGTTA 59.382 50.000 8.82 0.00 0.00 3.18
6657 8052 1.004277 AGAAGGCATTGCTCCCGTTAA 59.996 47.619 8.82 0.00 0.00 2.01
6658 8053 2.024414 GAAGGCATTGCTCCCGTTAAT 58.976 47.619 8.82 0.00 0.00 1.40
6659 8054 1.392589 AGGCATTGCTCCCGTTAATG 58.607 50.000 8.82 0.00 35.47 1.90
6660 8055 3.256620 GCATTGCTCCCGTTAATGC 57.743 52.632 0.16 0.00 46.48 3.56
6661 8056 0.592247 GCATTGCTCCCGTTAATGCG 60.592 55.000 0.16 0.00 44.67 4.73
6662 8057 0.732571 CATTGCTCCCGTTAATGCGT 59.267 50.000 0.00 0.00 0.00 5.24
6663 8058 1.937223 CATTGCTCCCGTTAATGCGTA 59.063 47.619 0.00 0.00 0.00 4.42
6664 8059 1.361793 TTGCTCCCGTTAATGCGTAC 58.638 50.000 0.00 0.00 0.00 3.67
6665 8060 0.533491 TGCTCCCGTTAATGCGTACT 59.467 50.000 0.00 0.00 0.00 2.73
6666 8061 1.206523 GCTCCCGTTAATGCGTACTC 58.793 55.000 0.00 0.00 0.00 2.59
6667 8062 1.202382 GCTCCCGTTAATGCGTACTCT 60.202 52.381 0.00 0.00 0.00 3.24
6668 8063 2.728922 CTCCCGTTAATGCGTACTCTC 58.271 52.381 0.00 0.00 0.00 3.20
6669 8064 2.358267 CTCCCGTTAATGCGTACTCTCT 59.642 50.000 0.00 0.00 0.00 3.10
6670 8065 2.357009 TCCCGTTAATGCGTACTCTCTC 59.643 50.000 0.00 0.00 0.00 3.20
6671 8066 2.543238 CCCGTTAATGCGTACTCTCTCC 60.543 54.545 0.00 0.00 0.00 3.71
6672 8067 2.373269 CGTTAATGCGTACTCTCTCCG 58.627 52.381 0.00 0.00 0.00 4.63
6673 8068 2.223203 CGTTAATGCGTACTCTCTCCGT 60.223 50.000 0.00 0.00 0.00 4.69
6674 8069 3.106672 GTTAATGCGTACTCTCTCCGTG 58.893 50.000 0.00 0.00 0.00 4.94
6675 8070 0.456221 AATGCGTACTCTCTCCGTGG 59.544 55.000 0.00 0.00 0.00 4.94
6676 8071 2.005960 ATGCGTACTCTCTCCGTGGC 62.006 60.000 0.00 0.00 0.00 5.01
6677 8072 2.799371 CGTACTCTCTCCGTGGCC 59.201 66.667 0.00 0.00 0.00 5.36
6678 8073 2.772691 CGTACTCTCTCCGTGGCCC 61.773 68.421 0.00 0.00 0.00 5.80
6679 8074 2.043248 TACTCTCTCCGTGGCCCC 60.043 66.667 0.00 0.00 0.00 5.80
6680 8075 2.623450 TACTCTCTCCGTGGCCCCT 61.623 63.158 0.00 0.00 0.00 4.79
6681 8076 1.284111 TACTCTCTCCGTGGCCCCTA 61.284 60.000 0.00 0.00 0.00 3.53
6682 8077 1.152440 CTCTCTCCGTGGCCCCTAT 60.152 63.158 0.00 0.00 0.00 2.57
6683 8078 0.112606 CTCTCTCCGTGGCCCCTATA 59.887 60.000 0.00 0.00 0.00 1.31
6684 8079 0.784495 TCTCTCCGTGGCCCCTATAT 59.216 55.000 0.00 0.00 0.00 0.86
6685 8080 0.898320 CTCTCCGTGGCCCCTATATG 59.102 60.000 0.00 0.00 0.00 1.78
6686 8081 0.485543 TCTCCGTGGCCCCTATATGA 59.514 55.000 0.00 0.00 0.00 2.15
6687 8082 1.132977 TCTCCGTGGCCCCTATATGAA 60.133 52.381 0.00 0.00 0.00 2.57
6688 8083 1.002087 CTCCGTGGCCCCTATATGAAC 59.998 57.143 0.00 0.00 0.00 3.18
6689 8084 0.036306 CCGTGGCCCCTATATGAACC 59.964 60.000 0.00 0.00 0.00 3.62
6690 8085 0.036306 CGTGGCCCCTATATGAACCC 59.964 60.000 0.00 0.00 0.00 4.11
6691 8086 1.145571 GTGGCCCCTATATGAACCCA 58.854 55.000 0.00 0.00 0.00 4.51
6692 8087 1.145571 TGGCCCCTATATGAACCCAC 58.854 55.000 0.00 0.00 0.00 4.61
6693 8088 0.036306 GGCCCCTATATGAACCCACG 59.964 60.000 0.00 0.00 0.00 4.94
6694 8089 1.053424 GCCCCTATATGAACCCACGA 58.947 55.000 0.00 0.00 0.00 4.35
6695 8090 1.002087 GCCCCTATATGAACCCACGAG 59.998 57.143 0.00 0.00 0.00 4.18
6696 8091 1.623811 CCCCTATATGAACCCACGAGG 59.376 57.143 0.00 0.00 43.78 4.63
6697 8092 2.605257 CCCTATATGAACCCACGAGGA 58.395 52.381 0.00 0.00 39.89 3.71
6698 8093 3.173965 CCCTATATGAACCCACGAGGAT 58.826 50.000 0.00 0.00 39.89 3.24
6699 8094 3.195825 CCCTATATGAACCCACGAGGATC 59.804 52.174 0.00 0.00 39.89 3.36
6702 8097 2.286826 TGAACCCACGAGGATCAGG 58.713 57.895 0.00 0.00 42.20 3.86
6703 8098 1.153349 GAACCCACGAGGATCAGGC 60.153 63.158 0.00 0.00 37.38 4.85
6704 8099 2.595009 GAACCCACGAGGATCAGGCC 62.595 65.000 0.00 0.00 37.38 5.19
6705 8100 3.866582 CCCACGAGGATCAGGCCC 61.867 72.222 0.00 0.00 38.24 5.80
6706 8101 2.765807 CCACGAGGATCAGGCCCT 60.766 66.667 0.00 0.00 36.89 5.19
6707 8102 2.503061 CACGAGGATCAGGCCCTG 59.497 66.667 3.69 3.69 33.36 4.45
6708 8103 3.474570 ACGAGGATCAGGCCCTGC 61.475 66.667 5.66 0.00 33.36 4.85
6709 8104 3.473647 CGAGGATCAGGCCCTGCA 61.474 66.667 5.66 0.00 33.36 4.41
6710 8105 2.509916 GAGGATCAGGCCCTGCAG 59.490 66.667 5.66 6.78 33.36 4.41
6711 8106 2.041762 AGGATCAGGCCCTGCAGA 59.958 61.111 17.39 0.00 31.66 4.26
6712 8107 2.191641 GGATCAGGCCCTGCAGAC 59.808 66.667 17.39 6.73 0.00 3.51
6713 8108 2.373707 GGATCAGGCCCTGCAGACT 61.374 63.158 17.39 7.54 0.00 3.24
6714 8109 1.050988 GGATCAGGCCCTGCAGACTA 61.051 60.000 17.39 0.00 0.00 2.59
6715 8110 0.105778 GATCAGGCCCTGCAGACTAC 59.894 60.000 17.39 2.22 0.00 2.73
6716 8111 1.680522 ATCAGGCCCTGCAGACTACG 61.681 60.000 17.39 0.26 0.00 3.51
6717 8112 2.037367 AGGCCCTGCAGACTACGA 59.963 61.111 17.39 0.00 0.00 3.43
6718 8113 1.609501 AGGCCCTGCAGACTACGAA 60.610 57.895 17.39 0.00 0.00 3.85
6719 8114 1.192146 AGGCCCTGCAGACTACGAAA 61.192 55.000 17.39 0.00 0.00 3.46
6720 8115 0.107654 GGCCCTGCAGACTACGAAAT 60.108 55.000 17.39 0.00 0.00 2.17
6721 8116 1.138266 GGCCCTGCAGACTACGAAATA 59.862 52.381 17.39 0.00 0.00 1.40
6722 8117 2.474816 GCCCTGCAGACTACGAAATAG 58.525 52.381 17.39 0.00 36.89 1.73
6723 8118 2.100916 GCCCTGCAGACTACGAAATAGA 59.899 50.000 17.39 0.00 34.65 1.98
6724 8119 3.430374 GCCCTGCAGACTACGAAATAGAA 60.430 47.826 17.39 0.00 34.65 2.10
6725 8120 4.755411 CCCTGCAGACTACGAAATAGAAA 58.245 43.478 17.39 0.00 34.65 2.52
6726 8121 4.806247 CCCTGCAGACTACGAAATAGAAAG 59.194 45.833 17.39 0.00 34.65 2.62
6727 8122 4.806247 CCTGCAGACTACGAAATAGAAAGG 59.194 45.833 17.39 0.00 34.65 3.11
6728 8123 5.394224 CCTGCAGACTACGAAATAGAAAGGA 60.394 44.000 17.39 0.00 34.65 3.36
6729 8124 5.651530 TGCAGACTACGAAATAGAAAGGAG 58.348 41.667 0.00 0.00 34.65 3.69
6730 8125 5.417894 TGCAGACTACGAAATAGAAAGGAGA 59.582 40.000 0.00 0.00 34.65 3.71
6731 8126 6.071560 TGCAGACTACGAAATAGAAAGGAGAA 60.072 38.462 0.00 0.00 34.65 2.87
6732 8127 6.474102 GCAGACTACGAAATAGAAAGGAGAAG 59.526 42.308 0.00 0.00 34.65 2.85
6733 8128 7.540299 CAGACTACGAAATAGAAAGGAGAAGT 58.460 38.462 0.00 0.00 34.65 3.01
6734 8129 7.486551 CAGACTACGAAATAGAAAGGAGAAGTG 59.513 40.741 0.00 0.00 34.65 3.16
6735 8130 7.177041 AGACTACGAAATAGAAAGGAGAAGTGT 59.823 37.037 0.00 0.00 34.65 3.55
6736 8131 7.668492 ACTACGAAATAGAAAGGAGAAGTGTT 58.332 34.615 0.00 0.00 34.65 3.32
6737 8132 7.813627 ACTACGAAATAGAAAGGAGAAGTGTTC 59.186 37.037 0.00 0.00 34.65 3.18
6738 8133 5.932883 ACGAAATAGAAAGGAGAAGTGTTCC 59.067 40.000 0.00 0.00 34.83 3.62
6739 8134 5.351740 CGAAATAGAAAGGAGAAGTGTTCCC 59.648 44.000 0.00 0.00 35.20 3.97
6740 8135 4.846168 ATAGAAAGGAGAAGTGTTCCCC 57.154 45.455 0.00 0.00 35.20 4.81
6741 8136 2.707554 AGAAAGGAGAAGTGTTCCCCT 58.292 47.619 0.00 0.00 39.93 4.79
6743 8138 3.073209 AGAAAGGAGAAGTGTTCCCCTTC 59.927 47.826 3.23 1.72 45.85 3.46
6744 8139 2.118403 AGGAGAAGTGTTCCCCTTCA 57.882 50.000 0.00 0.00 33.62 3.02
6745 8140 1.700186 AGGAGAAGTGTTCCCCTTCAC 59.300 52.381 0.00 0.00 33.62 3.18
6746 8141 1.271434 GGAGAAGTGTTCCCCTTCACC 60.271 57.143 0.00 0.00 40.71 4.02
6747 8142 1.420138 GAGAAGTGTTCCCCTTCACCA 59.580 52.381 0.00 0.00 40.62 4.17
6748 8143 1.143073 AGAAGTGTTCCCCTTCACCAC 59.857 52.381 0.00 0.00 40.62 4.16
6749 8144 0.179029 AAGTGTTCCCCTTCACCACG 60.179 55.000 0.00 0.00 35.45 4.94
6750 8145 1.052124 AGTGTTCCCCTTCACCACGA 61.052 55.000 0.00 0.00 35.45 4.35
6751 8146 0.036306 GTGTTCCCCTTCACCACGAT 59.964 55.000 0.00 0.00 0.00 3.73
6752 8147 0.036164 TGTTCCCCTTCACCACGATG 59.964 55.000 0.00 0.00 0.00 3.84
6753 8148 0.036306 GTTCCCCTTCACCACGATGT 59.964 55.000 0.00 0.00 0.00 3.06
6754 8149 0.036164 TTCCCCTTCACCACGATGTG 59.964 55.000 0.00 0.00 37.59 3.21
6755 8150 2.040544 CCCCTTCACCACGATGTGC 61.041 63.158 0.00 0.00 36.17 4.57
6756 8151 2.040544 CCCTTCACCACGATGTGCC 61.041 63.158 0.00 0.00 36.17 5.01
6757 8152 2.040544 CCTTCACCACGATGTGCCC 61.041 63.158 0.00 0.00 36.17 5.36
6758 8153 1.302431 CTTCACCACGATGTGCCCA 60.302 57.895 0.00 0.00 36.17 5.36
6759 8154 0.888736 CTTCACCACGATGTGCCCAA 60.889 55.000 0.00 0.00 36.17 4.12
6760 8155 0.251121 TTCACCACGATGTGCCCAAT 60.251 50.000 0.00 0.00 36.17 3.16
6761 8156 0.959867 TCACCACGATGTGCCCAATG 60.960 55.000 0.00 0.00 36.17 2.82
6762 8157 1.074775 ACCACGATGTGCCCAATGT 59.925 52.632 0.00 0.00 31.34 2.71
6763 8158 0.960364 ACCACGATGTGCCCAATGTC 60.960 55.000 0.00 0.00 31.34 3.06
6780 8175 0.957395 GTCGAGGAGTACACCGGTCA 60.957 60.000 2.59 0.00 34.73 4.02
6817 8377 1.211457 CTACCAGAAGGCATTGCTCCT 59.789 52.381 8.82 0.70 39.06 3.69
6884 8444 1.750399 GGAACAGATGCCGGCATGT 60.750 57.895 44.96 38.37 36.70 3.21
7045 8605 1.804601 GAACGAACCACCCAGTTAGG 58.195 55.000 0.00 0.00 37.03 2.69
7099 8659 2.566833 AGGTTGCTGCTGTTGTGATA 57.433 45.000 0.00 0.00 0.00 2.15
7112 8672 2.535012 TGTGATACTCGTGTTGCCAA 57.465 45.000 0.00 0.00 0.00 4.52
7330 8890 2.742053 TGATCTGCTTAGTTTGCGGTTC 59.258 45.455 0.00 0.00 37.96 3.62
7331 8891 2.543777 TCTGCTTAGTTTGCGGTTCT 57.456 45.000 0.00 0.00 37.96 3.01
7332 8892 2.846193 TCTGCTTAGTTTGCGGTTCTT 58.154 42.857 0.00 0.00 37.96 2.52
7373 8933 8.472007 TGTTTTATAATCTGGTGTGGAAACTT 57.528 30.769 0.00 0.00 0.00 2.66
7374 8934 8.356657 TGTTTTATAATCTGGTGTGGAAACTTG 58.643 33.333 0.00 0.00 0.00 3.16
7375 8935 6.509418 TTATAATCTGGTGTGGAAACTTGC 57.491 37.500 0.00 0.00 0.00 4.01
7376 8936 1.620822 ATCTGGTGTGGAAACTTGCC 58.379 50.000 0.00 0.00 0.00 4.52
7377 8937 0.550914 TCTGGTGTGGAAACTTGCCT 59.449 50.000 0.00 0.00 0.00 4.75
7378 8938 1.771854 TCTGGTGTGGAAACTTGCCTA 59.228 47.619 0.00 0.00 0.00 3.93
7379 8939 2.375174 TCTGGTGTGGAAACTTGCCTAT 59.625 45.455 0.00 0.00 0.00 2.57
7380 8940 3.585289 TCTGGTGTGGAAACTTGCCTATA 59.415 43.478 0.00 0.00 0.00 1.31
7381 8941 4.042311 TCTGGTGTGGAAACTTGCCTATAA 59.958 41.667 0.00 0.00 0.00 0.98
7382 8942 4.929479 TGGTGTGGAAACTTGCCTATAAT 58.071 39.130 0.00 0.00 0.00 1.28
7383 8943 4.947388 TGGTGTGGAAACTTGCCTATAATC 59.053 41.667 0.00 0.00 0.00 1.75
7384 8944 5.193679 GGTGTGGAAACTTGCCTATAATCT 58.806 41.667 0.00 0.00 0.00 2.40
7385 8945 5.066505 GGTGTGGAAACTTGCCTATAATCTG 59.933 44.000 0.00 0.00 0.00 2.90
7386 8946 5.066505 GTGTGGAAACTTGCCTATAATCTGG 59.933 44.000 0.00 0.00 0.00 3.86
7387 8947 5.193679 GTGGAAACTTGCCTATAATCTGGT 58.806 41.667 0.00 0.00 0.00 4.00
7388 8948 5.066505 GTGGAAACTTGCCTATAATCTGGTG 59.933 44.000 0.00 0.00 0.00 4.17
7389 8949 5.193679 GGAAACTTGCCTATAATCTGGTGT 58.806 41.667 0.00 0.00 0.00 4.16
7390 8950 5.066505 GGAAACTTGCCTATAATCTGGTGTG 59.933 44.000 0.00 0.00 0.00 3.82
7391 8951 4.156455 ACTTGCCTATAATCTGGTGTGG 57.844 45.455 0.00 0.00 0.00 4.17
7392 8952 3.780294 ACTTGCCTATAATCTGGTGTGGA 59.220 43.478 0.00 0.00 0.00 4.02
7393 8953 4.227300 ACTTGCCTATAATCTGGTGTGGAA 59.773 41.667 0.00 0.00 0.00 3.53
7394 8954 4.853468 TGCCTATAATCTGGTGTGGAAA 57.147 40.909 0.00 0.00 0.00 3.13
7395 8955 4.523083 TGCCTATAATCTGGTGTGGAAAC 58.477 43.478 0.00 0.00 0.00 2.78
7396 8956 4.227300 TGCCTATAATCTGGTGTGGAAACT 59.773 41.667 0.00 0.00 0.00 2.66
7430 8990 2.540265 AGCAGAAGTGGTTCAGACAG 57.460 50.000 0.00 0.00 34.82 3.51
7498 9071 6.672147 CCAGTCTTTGGTGTCTTTTTCTATG 58.328 40.000 0.00 0.00 42.41 2.23
7547 9123 5.578727 TGCAGTTGTTCCAAATTTGTTGTAC 59.421 36.000 16.73 7.22 0.00 2.90
7661 9260 5.163513 GTCGAATCGTTGGTACCTCTTTTA 58.836 41.667 14.36 0.00 0.00 1.52
7688 9287 6.255020 CAGGATGCTAACTCAAAATTTGATGC 59.745 38.462 9.02 11.26 39.30 3.91
7720 9320 5.299279 ACAAGTTTTGTCGATCATTTGAGGT 59.701 36.000 0.00 0.00 40.56 3.85
7791 9566 6.428159 AGATTGAGCTTTGTGTCGAACTAAAT 59.572 34.615 0.00 0.00 0.00 1.40
7802 9577 5.034797 TGTCGAACTAAATATCTCACGCTG 58.965 41.667 0.00 0.00 0.00 5.18
7821 9596 1.992667 TGCTTTGTTAGAGCGATCGTG 59.007 47.619 17.81 0.00 43.02 4.35
7827 9602 2.000447 GTTAGAGCGATCGTGGCTTTT 59.000 47.619 17.81 1.27 41.72 2.27
7847 9622 4.476628 TTTACCGGAATACTCTTCCCAC 57.523 45.455 9.46 0.00 35.17 4.61
7887 9663 7.766219 TGATCTTAAGAGTATTTTGTACGGC 57.234 36.000 11.53 0.00 0.00 5.68
7890 9666 9.694137 GATCTTAAGAGTATTTTGTACGGCTAT 57.306 33.333 11.53 0.00 0.00 2.97
7907 9705 5.105351 ACGGCTATAAAGTACGTAAACCCTT 60.105 40.000 0.00 0.00 36.92 3.95
7921 9719 5.174943 CGTAAACCCTTGAATTTGAAGTTGC 59.825 40.000 0.00 0.00 0.00 4.17
7927 9725 2.741612 TGAATTTGAAGTTGCTTGGCG 58.258 42.857 0.00 0.00 0.00 5.69
7954 9753 3.194005 TCCAGTCCAACAAGACACTTC 57.806 47.619 0.00 0.00 39.34 3.01
7955 9754 2.771943 TCCAGTCCAACAAGACACTTCT 59.228 45.455 0.00 0.00 39.34 2.85
7985 9784 4.614673 GTGGAACTGCGCTGTTTG 57.385 55.556 29.63 8.48 0.00 2.93
7994 9793 2.557805 CGCTGTTTGCATGCTCGT 59.442 55.556 20.33 0.00 43.06 4.18
7997 9796 1.606606 GCTGTTTGCATGCTCGTAAC 58.393 50.000 20.33 16.62 42.31 2.50
7999 9798 2.574322 CTGTTTGCATGCTCGTAACAC 58.426 47.619 20.33 1.64 0.00 3.32
8000 9799 2.217750 TGTTTGCATGCTCGTAACACT 58.782 42.857 20.33 0.00 0.00 3.55
8001 9800 3.394719 TGTTTGCATGCTCGTAACACTA 58.605 40.909 20.33 0.57 0.00 2.74
8002 9801 3.431912 TGTTTGCATGCTCGTAACACTAG 59.568 43.478 20.33 0.00 0.00 2.57
8003 9802 2.293677 TGCATGCTCGTAACACTAGG 57.706 50.000 20.33 0.00 0.00 3.02
8004 9803 1.548719 TGCATGCTCGTAACACTAGGT 59.451 47.619 20.33 0.00 0.00 3.08
8008 10006 4.809426 GCATGCTCGTAACACTAGGTAAAT 59.191 41.667 11.37 0.00 0.00 1.40
8012 10010 5.041940 GCTCGTAACACTAGGTAAATCCAG 58.958 45.833 0.00 0.00 39.02 3.86
8118 10116 7.324178 ACACTCGCTAAATTCTCAATCTAAGT 58.676 34.615 0.00 0.00 0.00 2.24
8141 10139 9.959721 AAGTTAAGAATGTACATCCTACATGTT 57.040 29.630 9.23 0.00 38.10 2.71
8150 10148 4.718961 ACATCCTACATGTTTCATAGCCC 58.281 43.478 2.30 0.00 0.00 5.19
8160 10158 4.709250 TGTTTCATAGCCCGTATTATGCA 58.291 39.130 0.00 0.00 0.00 3.96
8162 10160 5.767665 TGTTTCATAGCCCGTATTATGCATT 59.232 36.000 3.54 0.00 0.00 3.56
8202 10200 9.119329 GATGACGACATAAGTGTATATTCTCAC 57.881 37.037 0.00 0.00 39.09 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.553028 GGTGATGCTCCCTTGTTCTTCA 60.553 50.000 0.00 0.00 0.00 3.02
177 181 1.745264 GGAGGATCGCAGGAAGGAG 59.255 63.158 0.00 0.00 34.37 3.69
240 244 1.162800 GCGATGAAGAGACCATGGGC 61.163 60.000 18.09 14.76 0.00 5.36
241 245 0.467384 AGCGATGAAGAGACCATGGG 59.533 55.000 18.09 0.00 0.00 4.00
309 313 1.988063 CCATGACGAGCCTGATATCG 58.012 55.000 0.00 0.00 44.36 2.92
348 352 1.876714 CGTCTAATCCGCCGGTGTG 60.877 63.158 15.14 5.68 0.00 3.82
710 731 4.423209 GGGAGGGCCTCAGGGACT 62.423 72.222 33.27 0.00 41.42 3.85
711 732 4.741239 TGGGAGGGCCTCAGGGAC 62.741 72.222 33.27 16.30 40.80 4.46
714 735 4.748798 AGGTGGGAGGGCCTCAGG 62.749 72.222 33.27 0.00 31.08 3.86
715 736 3.406200 CAGGTGGGAGGGCCTCAG 61.406 72.222 33.27 12.51 31.73 3.35
716 737 2.788230 ATTCAGGTGGGAGGGCCTCA 62.788 60.000 33.27 13.58 31.73 3.86
717 738 0.694444 TATTCAGGTGGGAGGGCCTC 60.694 60.000 25.80 25.80 31.73 4.70
719 740 0.629058 TTTATTCAGGTGGGAGGGCC 59.371 55.000 0.00 0.00 0.00 5.80
720 741 2.755952 ATTTATTCAGGTGGGAGGGC 57.244 50.000 0.00 0.00 0.00 5.19
721 742 4.145052 GCTTATTTATTCAGGTGGGAGGG 58.855 47.826 0.00 0.00 0.00 4.30
722 743 4.580580 GTGCTTATTTATTCAGGTGGGAGG 59.419 45.833 0.00 0.00 0.00 4.30
723 744 5.440610 AGTGCTTATTTATTCAGGTGGGAG 58.559 41.667 0.00 0.00 0.00 4.30
724 745 5.450818 AGTGCTTATTTATTCAGGTGGGA 57.549 39.130 0.00 0.00 0.00 4.37
725 746 6.357367 ACTAGTGCTTATTTATTCAGGTGGG 58.643 40.000 0.00 0.00 0.00 4.61
726 747 9.209175 GATACTAGTGCTTATTTATTCAGGTGG 57.791 37.037 5.39 0.00 0.00 4.61
727 748 9.209175 GGATACTAGTGCTTATTTATTCAGGTG 57.791 37.037 5.39 0.00 0.00 4.00
760 784 3.645687 TCTGGGGCAGTGCTTAAATTTTT 59.354 39.130 16.11 0.00 32.61 1.94
763 787 2.603075 TCTGGGGCAGTGCTTAAATT 57.397 45.000 16.11 0.00 32.61 1.82
765 789 2.158534 TCTTTCTGGGGCAGTGCTTAAA 60.159 45.455 16.11 7.69 32.61 1.52
775 799 0.542938 AGGGCTTTTCTTTCTGGGGC 60.543 55.000 0.00 0.00 0.00 5.80
804 828 5.590663 GGTGACAGTTCCTTCTCTTCTTTTT 59.409 40.000 0.00 0.00 0.00 1.94
805 829 5.104318 AGGTGACAGTTCCTTCTCTTCTTTT 60.104 40.000 0.00 0.00 0.00 2.27
809 833 4.061596 CAAGGTGACAGTTCCTTCTCTTC 58.938 47.826 7.70 0.00 41.44 2.87
810 834 3.745797 GCAAGGTGACAGTTCCTTCTCTT 60.746 47.826 7.70 0.00 41.44 2.85
811 835 2.224402 GCAAGGTGACAGTTCCTTCTCT 60.224 50.000 7.70 0.00 41.44 3.10
812 836 2.147150 GCAAGGTGACAGTTCCTTCTC 58.853 52.381 7.70 1.77 41.44 2.87
977 1024 3.866582 CTAGGGCAGGGCGAAGGG 61.867 72.222 0.00 0.00 0.00 3.95
1033 1080 1.080230 CATATCTCCCAGCGGCGAG 60.080 63.158 12.98 0.93 0.00 5.03
1034 1081 2.574018 CCATATCTCCCAGCGGCGA 61.574 63.158 12.98 0.00 0.00 5.54
1035 1082 2.047844 CCATATCTCCCAGCGGCG 60.048 66.667 0.51 0.51 0.00 6.46
1037 1084 0.319728 CTCACCATATCTCCCAGCGG 59.680 60.000 0.00 0.00 0.00 5.52
1041 1088 0.768221 GGGGCTCACCATATCTCCCA 60.768 60.000 0.00 0.00 42.91 4.37
1057 1104 2.507471 AGAAGCAACAGAAGATAGGGGG 59.493 50.000 0.00 0.00 0.00 5.40
1066 1113 2.039480 AGCCTGATGAGAAGCAACAGAA 59.961 45.455 0.00 0.00 46.88 3.02
1136 1183 4.632327 TGGGCATTGGATCATATAACGA 57.368 40.909 0.00 0.00 0.00 3.85
1180 1227 6.026834 TGACGGGATTATTATCTGGGGAATA 58.973 40.000 0.00 0.00 0.00 1.75
1258 1305 1.202818 AGGTTCCAGCTTCCAACAGAC 60.203 52.381 0.00 0.00 0.00 3.51
1270 1317 3.763897 CCCAAAATACTCCAAGGTTCCAG 59.236 47.826 0.00 0.00 0.00 3.86
1292 1339 2.485814 GAGGTCAGTGGAGAAAACATGC 59.514 50.000 0.00 0.00 0.00 4.06
1303 1350 4.543590 ACAATCTACAAGAGGTCAGTGG 57.456 45.455 0.00 0.00 0.00 4.00
1332 1392 5.964958 ACCAATCACATCCTAAACAAGTG 57.035 39.130 0.00 0.00 0.00 3.16
1364 1424 6.723052 ACCCTAGTGCTAACTTTACTGTCTTA 59.277 38.462 0.00 0.00 37.88 2.10
1365 1425 5.543020 ACCCTAGTGCTAACTTTACTGTCTT 59.457 40.000 0.00 0.00 37.88 3.01
1461 1521 1.613061 CTGGGCTAAAATCCCCGGT 59.387 57.895 0.00 0.00 44.58 5.28
1471 1531 3.637769 ACAAAGGAACAAACTGGGCTAA 58.362 40.909 0.00 0.00 0.00 3.09
1472 1532 3.306472 ACAAAGGAACAAACTGGGCTA 57.694 42.857 0.00 0.00 0.00 3.93
1532 1592 6.994496 TCAGGGAATTATCTGCTTTACTCATG 59.006 38.462 3.40 0.00 0.00 3.07
1602 1662 0.320374 AGGTTGTTGTAGCTGCGCTA 59.680 50.000 9.73 6.23 40.44 4.26
1650 1710 4.518970 TGTAACTCCTTGCAATGTTCTTCC 59.481 41.667 13.40 4.92 0.00 3.46
1651 1711 5.689383 TGTAACTCCTTGCAATGTTCTTC 57.311 39.130 13.40 8.35 0.00 2.87
1685 1745 2.996631 GCAGAGTTCCTGGTCATTGAT 58.003 47.619 0.00 0.00 43.13 2.57
1694 1754 8.607459 CATTTGTAAATACTAGCAGAGTTCCTG 58.393 37.037 0.00 0.00 45.67 3.86
1780 1847 8.816640 TCTCAATAAACCTTTCAAGAATTTGC 57.183 30.769 0.00 0.00 34.21 3.68
1808 1875 2.627699 CCTCTCTGATGTTCCTAGAGGC 59.372 54.545 3.90 0.00 44.96 4.70
1813 1880 6.673583 TCAATCTACCTCTCTGATGTTCCTA 58.326 40.000 0.00 0.00 0.00 2.94
1881 1948 1.725641 TGATACAGCGGCAAGACTTG 58.274 50.000 11.02 11.02 0.00 3.16
1891 1958 5.931532 AGAAGTGAAAACAATGATACAGCG 58.068 37.500 0.00 0.00 0.00 5.18
1966 2033 0.039798 TCTTCGTCACCACTACGCAC 60.040 55.000 0.00 0.00 40.12 5.34
1996 2063 7.228108 GTCACTGTAATCATCATCACCATCATT 59.772 37.037 0.00 0.00 0.00 2.57
2058 2125 2.019249 CCACTACCATGATTGTGGCTG 58.981 52.381 7.81 0.00 43.27 4.85
2151 2218 2.359850 CCACCACCACCACCATCG 60.360 66.667 0.00 0.00 0.00 3.84
2156 2223 2.035626 CATCCCCACCACCACCAC 59.964 66.667 0.00 0.00 0.00 4.16
2169 2236 7.439157 TGCACATAAATTATCAGTAGCATCC 57.561 36.000 0.00 0.00 0.00 3.51
2373 2442 5.968528 ACGGAAGTTATGGCATTACAAAA 57.031 34.783 17.81 0.00 46.40 2.44
2389 2458 2.766313 TGTCTGAAACATGGACGGAAG 58.234 47.619 0.00 0.00 31.20 3.46
2421 2490 8.802856 CATTCACGTTCTTTCAAATACAAAACA 58.197 29.630 0.00 0.00 0.00 2.83
2440 2520 4.378459 GGCTTTCAAGGTTCTACATTCACG 60.378 45.833 0.00 0.00 0.00 4.35
2542 2622 7.780745 TCCATCTTGGGTTAGTTGAAAAACTAA 59.219 33.333 6.91 6.91 39.09 2.24
2543 2623 7.291566 TCCATCTTGGGTTAGTTGAAAAACTA 58.708 34.615 0.00 0.00 38.32 2.24
2544 2624 6.133356 TCCATCTTGGGTTAGTTGAAAAACT 58.867 36.000 0.00 0.00 38.32 2.66
2545 2625 6.264518 TCTCCATCTTGGGTTAGTTGAAAAAC 59.735 38.462 0.00 0.00 38.32 2.43
2546 2626 6.369629 TCTCCATCTTGGGTTAGTTGAAAAA 58.630 36.000 0.00 0.00 38.32 1.94
2547 2627 5.947663 TCTCCATCTTGGGTTAGTTGAAAA 58.052 37.500 0.00 0.00 38.32 2.29
2548 2628 5.309543 TCTCTCCATCTTGGGTTAGTTGAAA 59.690 40.000 0.00 0.00 38.32 2.69
2549 2629 4.844085 TCTCTCCATCTTGGGTTAGTTGAA 59.156 41.667 0.00 0.00 38.32 2.69
2550 2630 4.425772 TCTCTCCATCTTGGGTTAGTTGA 58.574 43.478 0.00 0.00 38.32 3.18
2551 2631 4.383552 CCTCTCTCCATCTTGGGTTAGTTG 60.384 50.000 0.00 0.00 38.32 3.16
2552 2632 3.777522 CCTCTCTCCATCTTGGGTTAGTT 59.222 47.826 0.00 0.00 38.32 2.24
2553 2633 3.012959 TCCTCTCTCCATCTTGGGTTAGT 59.987 47.826 0.00 0.00 38.32 2.24
2554 2634 3.640967 CTCCTCTCTCCATCTTGGGTTAG 59.359 52.174 0.00 0.00 38.32 2.34
2555 2635 3.647636 CTCCTCTCTCCATCTTGGGTTA 58.352 50.000 0.00 0.00 38.32 2.85
2556 2636 2.476199 CTCCTCTCTCCATCTTGGGTT 58.524 52.381 0.00 0.00 38.32 4.11
2557 2637 2.173126 CTCCTCTCTCCATCTTGGGT 57.827 55.000 0.00 0.00 38.32 4.51
2897 2977 7.987458 ACATGTCTTCAAGACTTTTGAACTAGA 59.013 33.333 18.49 0.00 45.27 2.43
2930 3010 3.270169 TCATCCCATATGCATAGCCCAAT 59.730 43.478 12.79 0.00 0.00 3.16
2932 3012 2.277317 TCATCCCATATGCATAGCCCA 58.723 47.619 12.79 0.00 0.00 5.36
2976 3056 5.221087 GCTCACTCACTCCCTACAGTATTAC 60.221 48.000 0.00 0.00 0.00 1.89
3042 3122 9.838975 CATCTCAGAGATCAGTATACATAACAC 57.161 37.037 10.25 0.00 31.32 3.32
3115 3196 9.733556 TCAAGGAAAATAGTAGAGCAATTTACA 57.266 29.630 0.00 0.00 0.00 2.41
3336 3445 4.003648 GACATCTGGGAAGTTGGTTACAG 58.996 47.826 0.00 0.00 0.00 2.74
3437 3547 4.605640 ACCATGCAAGCAACATTAGTTT 57.394 36.364 0.00 0.00 35.28 2.66
3756 4495 7.698130 CAGAAGTTAAACCAAGAGTTTCACAAG 59.302 37.037 5.67 0.00 45.85 3.16
3802 4541 2.771943 TGGACCAGTCAGTGAGAACTTT 59.228 45.455 0.00 0.00 0.00 2.66
3812 4551 0.107456 AACACTGCTGGACCAGTCAG 59.893 55.000 29.27 29.27 43.85 3.51
3828 4567 9.434420 CAAATTTGAGCCAGGAAAATTATAACA 57.566 29.630 13.08 0.00 33.51 2.41
3999 4739 0.604578 ACCACATGCCACATTCTTGC 59.395 50.000 0.00 0.00 0.00 4.01
4031 4771 1.068541 GCAAAACTAGAAAGGCCACCG 60.069 52.381 5.01 0.00 0.00 4.94
4042 4782 5.356882 TTGAATGAGAACCGCAAAACTAG 57.643 39.130 0.00 0.00 0.00 2.57
4178 4919 8.143835 AGGAACTGGATTTAAATGTTTCACTTG 58.856 33.333 5.17 0.00 37.18 3.16
4223 4965 6.166984 TCAGTTGCCCACAATTCAAAATAA 57.833 33.333 0.00 0.00 38.27 1.40
4303 5045 6.226787 AGGGCACTTCGAATCATATCTAAAG 58.773 40.000 0.00 0.00 0.00 1.85
4360 5102 6.787085 ACAAAAGAACTAGAATCACGAAGG 57.213 37.500 0.00 0.00 0.00 3.46
4380 5122 9.039870 CCTAAATGAATGCACACTTTAAAACAA 57.960 29.630 0.00 0.00 0.00 2.83
4381 5123 8.200792 ACCTAAATGAATGCACACTTTAAAACA 58.799 29.630 0.00 0.00 0.00 2.83
4382 5124 8.487176 CACCTAAATGAATGCACACTTTAAAAC 58.513 33.333 0.00 0.00 0.00 2.43
4508 5250 2.335092 ATCCCAGCAGCAATCCTCCG 62.335 60.000 0.00 0.00 0.00 4.63
4609 5351 1.595109 CACTGGACAGCGTCTGCAA 60.595 57.895 6.74 0.00 46.23 4.08
4641 5383 7.996644 GGATAACAGAATACCTTGGGAAACATA 59.003 37.037 0.00 0.00 0.00 2.29
5096 5838 1.598130 GCTCCGCAGTTCCTGTTGT 60.598 57.895 0.00 0.00 33.43 3.32
5122 5864 3.676324 CGGCTTCTTCTCGACATACCTTT 60.676 47.826 0.00 0.00 0.00 3.11
5160 6052 6.720288 TGTCCTATAAATTTTTGGAACGGGAA 59.280 34.615 0.00 0.00 0.00 3.97
5471 6363 5.388408 TTTTCTCTCCTACGAGTTTCTCC 57.612 43.478 0.00 0.00 37.40 3.71
5565 6457 0.249657 GTCACCATCAGATCCGGAGC 60.250 60.000 13.00 13.00 0.00 4.70
5680 6572 6.179906 TGTCTCTGTCTCTTTCCTGATTTT 57.820 37.500 0.00 0.00 0.00 1.82
5683 6575 3.768757 CCTGTCTCTGTCTCTTTCCTGAT 59.231 47.826 0.00 0.00 0.00 2.90
5868 6760 8.015185 TGAAGATCTCTGATCATCATTACACA 57.985 34.615 10.26 0.00 0.00 3.72
6407 7802 0.836400 TGTGAAGGGGGACTGAGACC 60.836 60.000 0.00 0.00 0.00 3.85
6485 7880 1.815003 GCTTCCACTAGCAGCATGTTT 59.185 47.619 0.00 0.00 40.89 2.83
6599 7994 0.810016 GGTCGACCAGTGTACTCCTC 59.190 60.000 29.75 0.00 35.64 3.71
6600 7995 0.111832 TGGTCGACCAGTGTACTCCT 59.888 55.000 33.23 0.00 42.01 3.69
6601 7996 2.649831 TGGTCGACCAGTGTACTCC 58.350 57.895 33.23 3.57 42.01 3.85
6608 8003 4.387326 ACCATATTCAGTGGTCGACCAGT 61.387 47.826 37.04 35.69 46.79 4.00
6609 8004 2.168521 ACCATATTCAGTGGTCGACCAG 59.831 50.000 37.04 25.69 46.79 4.00
6610 8005 2.093711 CACCATATTCAGTGGTCGACCA 60.094 50.000 33.23 33.23 46.79 4.02
6611 8006 2.550978 CACCATATTCAGTGGTCGACC 58.449 52.381 28.17 28.17 46.79 4.79
6612 8007 1.933853 GCACCATATTCAGTGGTCGAC 59.066 52.381 7.13 7.13 46.79 4.20
6613 8008 1.831106 AGCACCATATTCAGTGGTCGA 59.169 47.619 0.00 0.00 46.79 4.20
6614 8009 2.315925 AGCACCATATTCAGTGGTCG 57.684 50.000 0.00 0.00 46.79 4.79
6615 8010 3.134458 GCTAGCACCATATTCAGTGGTC 58.866 50.000 10.63 0.00 46.79 4.02
6617 8012 3.136763 CTGCTAGCACCATATTCAGTGG 58.863 50.000 14.93 0.00 42.55 4.00
6618 8013 4.063998 TCTGCTAGCACCATATTCAGTG 57.936 45.455 14.93 0.00 37.05 3.66
6619 8014 4.444022 CCTTCTGCTAGCACCATATTCAGT 60.444 45.833 14.93 0.00 0.00 3.41
6620 8015 4.063689 CCTTCTGCTAGCACCATATTCAG 58.936 47.826 14.93 0.34 0.00 3.02
6621 8016 3.745480 GCCTTCTGCTAGCACCATATTCA 60.745 47.826 14.93 0.00 36.87 2.57
6622 8017 2.810852 GCCTTCTGCTAGCACCATATTC 59.189 50.000 14.93 0.00 36.87 1.75
6623 8018 2.173356 TGCCTTCTGCTAGCACCATATT 59.827 45.455 14.93 0.00 42.00 1.28
6624 8019 1.770658 TGCCTTCTGCTAGCACCATAT 59.229 47.619 14.93 0.00 42.00 1.78
6625 8020 1.203237 TGCCTTCTGCTAGCACCATA 58.797 50.000 14.93 0.00 42.00 2.74
6626 8021 0.549950 ATGCCTTCTGCTAGCACCAT 59.450 50.000 14.93 8.55 39.77 3.55
6627 8022 0.329261 AATGCCTTCTGCTAGCACCA 59.671 50.000 14.93 6.53 39.77 4.17
6628 8023 0.737219 CAATGCCTTCTGCTAGCACC 59.263 55.000 14.93 0.59 39.77 5.01
6629 8024 0.100146 GCAATGCCTTCTGCTAGCAC 59.900 55.000 14.93 4.10 39.77 4.40
6630 8025 0.034767 AGCAATGCCTTCTGCTAGCA 60.035 50.000 18.22 18.22 46.92 3.49
6631 8026 2.791170 AGCAATGCCTTCTGCTAGC 58.209 52.632 8.10 8.10 46.92 3.42
6635 8030 2.768492 CGGGAGCAATGCCTTCTGC 61.768 63.158 0.00 0.00 41.77 4.26
6636 8031 0.962356 AACGGGAGCAATGCCTTCTG 60.962 55.000 0.00 0.00 0.00 3.02
6637 8032 0.618458 TAACGGGAGCAATGCCTTCT 59.382 50.000 0.00 0.00 0.00 2.85
6638 8033 1.459450 TTAACGGGAGCAATGCCTTC 58.541 50.000 0.00 0.00 0.00 3.46
6639 8034 1.750778 CATTAACGGGAGCAATGCCTT 59.249 47.619 0.00 0.00 31.58 4.35
6640 8035 1.392589 CATTAACGGGAGCAATGCCT 58.607 50.000 0.00 0.00 31.58 4.75
6641 8036 3.944871 CATTAACGGGAGCAATGCC 57.055 52.632 0.00 0.00 31.58 4.40
6642 8037 3.256620 GCATTAACGGGAGCAATGC 57.743 52.632 0.00 0.00 46.89 3.56
6643 8038 0.732571 ACGCATTAACGGGAGCAATG 59.267 50.000 0.00 0.00 38.14 2.82
6644 8039 1.937899 GTACGCATTAACGGGAGCAAT 59.062 47.619 0.00 0.00 37.37 3.56
6645 8040 1.066716 AGTACGCATTAACGGGAGCAA 60.067 47.619 0.00 0.00 37.37 3.91
6646 8041 0.533491 AGTACGCATTAACGGGAGCA 59.467 50.000 0.00 0.00 37.37 4.26
6647 8042 1.202382 AGAGTACGCATTAACGGGAGC 60.202 52.381 0.00 0.00 37.37 4.70
6648 8043 2.358267 AGAGAGTACGCATTAACGGGAG 59.642 50.000 0.00 0.00 37.37 4.30
6649 8044 2.357009 GAGAGAGTACGCATTAACGGGA 59.643 50.000 0.00 0.00 37.37 5.14
6650 8045 2.543238 GGAGAGAGTACGCATTAACGGG 60.543 54.545 0.00 0.00 37.37 5.28
6651 8046 2.728922 GGAGAGAGTACGCATTAACGG 58.271 52.381 0.00 0.00 37.37 4.44
6652 8047 2.223203 ACGGAGAGAGTACGCATTAACG 60.223 50.000 0.00 0.00 39.50 3.18
6653 8048 3.106672 CACGGAGAGAGTACGCATTAAC 58.893 50.000 0.00 0.00 0.00 2.01
6654 8049 2.098607 CCACGGAGAGAGTACGCATTAA 59.901 50.000 0.00 0.00 0.00 1.40
6655 8050 1.674441 CCACGGAGAGAGTACGCATTA 59.326 52.381 0.00 0.00 0.00 1.90
6656 8051 0.456221 CCACGGAGAGAGTACGCATT 59.544 55.000 0.00 0.00 0.00 3.56
6657 8052 2.005960 GCCACGGAGAGAGTACGCAT 62.006 60.000 0.00 0.00 0.00 4.73
6658 8053 2.697761 GCCACGGAGAGAGTACGCA 61.698 63.158 0.00 0.00 0.00 5.24
6659 8054 2.102553 GCCACGGAGAGAGTACGC 59.897 66.667 0.00 0.00 0.00 4.42
6660 8055 2.772691 GGGCCACGGAGAGAGTACG 61.773 68.421 4.39 0.00 0.00 3.67
6661 8056 2.424733 GGGGCCACGGAGAGAGTAC 61.425 68.421 4.39 0.00 0.00 2.73
6662 8057 1.284111 TAGGGGCCACGGAGAGAGTA 61.284 60.000 4.39 0.00 0.00 2.59
6663 8058 1.950748 ATAGGGGCCACGGAGAGAGT 61.951 60.000 4.39 0.00 0.00 3.24
6664 8059 0.112606 TATAGGGGCCACGGAGAGAG 59.887 60.000 4.39 0.00 0.00 3.20
6665 8060 0.784495 ATATAGGGGCCACGGAGAGA 59.216 55.000 4.39 0.00 0.00 3.10
6666 8061 0.898320 CATATAGGGGCCACGGAGAG 59.102 60.000 4.39 0.00 0.00 3.20
6667 8062 0.485543 TCATATAGGGGCCACGGAGA 59.514 55.000 4.39 0.00 0.00 3.71
6668 8063 1.002087 GTTCATATAGGGGCCACGGAG 59.998 57.143 4.39 0.00 0.00 4.63
6669 8064 1.053424 GTTCATATAGGGGCCACGGA 58.947 55.000 4.39 0.00 0.00 4.69
6670 8065 0.036306 GGTTCATATAGGGGCCACGG 59.964 60.000 4.39 0.00 0.00 4.94
6671 8066 0.036306 GGGTTCATATAGGGGCCACG 59.964 60.000 4.39 0.00 0.00 4.94
6672 8067 1.145571 TGGGTTCATATAGGGGCCAC 58.854 55.000 4.39 0.00 0.00 5.01
6673 8068 1.145571 GTGGGTTCATATAGGGGCCA 58.854 55.000 4.39 0.00 0.00 5.36
6674 8069 0.036306 CGTGGGTTCATATAGGGGCC 59.964 60.000 0.00 0.00 0.00 5.80
6675 8070 1.002087 CTCGTGGGTTCATATAGGGGC 59.998 57.143 0.00 0.00 0.00 5.80
6676 8071 1.623811 CCTCGTGGGTTCATATAGGGG 59.376 57.143 0.00 0.00 0.00 4.79
6677 8072 2.605257 TCCTCGTGGGTTCATATAGGG 58.395 52.381 3.23 0.00 36.25 3.53
6678 8073 3.832490 TGATCCTCGTGGGTTCATATAGG 59.168 47.826 3.23 0.00 38.48 2.57
6679 8074 4.081972 CCTGATCCTCGTGGGTTCATATAG 60.082 50.000 3.23 0.00 41.40 1.31
6680 8075 3.832490 CCTGATCCTCGTGGGTTCATATA 59.168 47.826 3.23 0.00 41.40 0.86
6681 8076 2.634940 CCTGATCCTCGTGGGTTCATAT 59.365 50.000 3.23 0.00 41.40 1.78
6682 8077 2.039418 CCTGATCCTCGTGGGTTCATA 58.961 52.381 3.23 0.00 41.40 2.15
6683 8078 0.833287 CCTGATCCTCGTGGGTTCAT 59.167 55.000 3.23 0.00 41.40 2.57
6684 8079 1.899437 GCCTGATCCTCGTGGGTTCA 61.899 60.000 3.23 6.77 40.40 3.18
6685 8080 1.153349 GCCTGATCCTCGTGGGTTC 60.153 63.158 3.23 2.37 36.25 3.62
6686 8081 2.670148 GGCCTGATCCTCGTGGGTT 61.670 63.158 3.23 0.00 36.25 4.11
6687 8082 3.083997 GGCCTGATCCTCGTGGGT 61.084 66.667 3.23 0.00 36.25 4.51
6688 8083 3.866582 GGGCCTGATCCTCGTGGG 61.867 72.222 0.84 0.00 0.00 4.61
6689 8084 2.765807 AGGGCCTGATCCTCGTGG 60.766 66.667 4.50 0.00 0.00 4.94
6690 8085 2.503061 CAGGGCCTGATCCTCGTG 59.497 66.667 29.96 0.00 32.44 4.35
6691 8086 3.474570 GCAGGGCCTGATCCTCGT 61.475 66.667 37.07 0.00 32.44 4.18
6692 8087 3.457625 CTGCAGGGCCTGATCCTCG 62.458 68.421 37.07 9.26 32.44 4.63
6693 8088 2.068821 TCTGCAGGGCCTGATCCTC 61.069 63.158 37.07 18.80 32.44 3.71
6694 8089 2.041762 TCTGCAGGGCCTGATCCT 59.958 61.111 37.07 0.00 32.44 3.24
6695 8090 1.050988 TAGTCTGCAGGGCCTGATCC 61.051 60.000 37.07 19.57 32.44 3.36
6696 8091 0.105778 GTAGTCTGCAGGGCCTGATC 59.894 60.000 37.07 20.33 32.44 2.92
6697 8092 1.680522 CGTAGTCTGCAGGGCCTGAT 61.681 60.000 37.07 17.62 32.44 2.90
6698 8093 2.351244 CGTAGTCTGCAGGGCCTGA 61.351 63.158 37.07 19.97 32.44 3.86
6699 8094 1.888436 TTCGTAGTCTGCAGGGCCTG 61.888 60.000 29.44 29.44 34.12 4.85
6700 8095 1.192146 TTTCGTAGTCTGCAGGGCCT 61.192 55.000 15.13 0.00 0.00 5.19
6701 8096 0.107654 ATTTCGTAGTCTGCAGGGCC 60.108 55.000 15.13 0.00 0.00 5.80
6702 8097 2.100916 TCTATTTCGTAGTCTGCAGGGC 59.899 50.000 15.13 7.50 0.00 5.19
6703 8098 4.386867 TTCTATTTCGTAGTCTGCAGGG 57.613 45.455 15.13 0.00 0.00 4.45
6704 8099 4.806247 CCTTTCTATTTCGTAGTCTGCAGG 59.194 45.833 15.13 0.00 0.00 4.85
6705 8100 5.651530 TCCTTTCTATTTCGTAGTCTGCAG 58.348 41.667 7.63 7.63 0.00 4.41
6706 8101 5.417894 TCTCCTTTCTATTTCGTAGTCTGCA 59.582 40.000 0.00 0.00 0.00 4.41
6707 8102 5.892568 TCTCCTTTCTATTTCGTAGTCTGC 58.107 41.667 0.00 0.00 0.00 4.26
6708 8103 7.486551 CACTTCTCCTTTCTATTTCGTAGTCTG 59.513 40.741 0.00 0.00 0.00 3.51
6709 8104 7.177041 ACACTTCTCCTTTCTATTTCGTAGTCT 59.823 37.037 0.00 0.00 0.00 3.24
6710 8105 7.314393 ACACTTCTCCTTTCTATTTCGTAGTC 58.686 38.462 0.00 0.00 0.00 2.59
6711 8106 7.229581 ACACTTCTCCTTTCTATTTCGTAGT 57.770 36.000 0.00 0.00 0.00 2.73
6712 8107 7.275999 GGAACACTTCTCCTTTCTATTTCGTAG 59.724 40.741 0.00 0.00 0.00 3.51
6713 8108 7.095270 GGAACACTTCTCCTTTCTATTTCGTA 58.905 38.462 0.00 0.00 0.00 3.43
6714 8109 5.932883 GGAACACTTCTCCTTTCTATTTCGT 59.067 40.000 0.00 0.00 0.00 3.85
6715 8110 5.351740 GGGAACACTTCTCCTTTCTATTTCG 59.648 44.000 0.00 0.00 33.11 3.46
6716 8111 6.745159 GGGAACACTTCTCCTTTCTATTTC 57.255 41.667 0.00 0.00 33.11 2.17
6727 8122 1.420138 TGGTGAAGGGGAACACTTCTC 59.580 52.381 12.00 8.46 43.59 2.87
6728 8123 1.143073 GTGGTGAAGGGGAACACTTCT 59.857 52.381 12.00 0.00 43.59 2.85
6729 8124 1.605753 GTGGTGAAGGGGAACACTTC 58.394 55.000 4.36 4.36 43.52 3.01
6730 8125 0.179029 CGTGGTGAAGGGGAACACTT 60.179 55.000 0.00 0.00 37.22 3.16
6731 8126 1.052124 TCGTGGTGAAGGGGAACACT 61.052 55.000 0.00 0.00 37.22 3.55
6732 8127 0.036306 ATCGTGGTGAAGGGGAACAC 59.964 55.000 0.00 0.00 36.44 3.32
6733 8128 0.036164 CATCGTGGTGAAGGGGAACA 59.964 55.000 0.00 0.00 0.00 3.18
6734 8129 0.036306 ACATCGTGGTGAAGGGGAAC 59.964 55.000 0.00 0.00 0.00 3.62
6735 8130 0.036164 CACATCGTGGTGAAGGGGAA 59.964 55.000 3.63 0.00 41.32 3.97
6736 8131 1.676968 CACATCGTGGTGAAGGGGA 59.323 57.895 3.63 0.00 41.32 4.81
6737 8132 2.040544 GCACATCGTGGTGAAGGGG 61.041 63.158 12.24 0.00 41.32 4.79
6738 8133 2.040544 GGCACATCGTGGTGAAGGG 61.041 63.158 12.24 0.00 41.32 3.95
6739 8134 2.040544 GGGCACATCGTGGTGAAGG 61.041 63.158 12.24 0.00 41.32 3.46
6740 8135 0.888736 TTGGGCACATCGTGGTGAAG 60.889 55.000 12.24 0.00 41.32 3.02
6741 8136 0.251121 ATTGGGCACATCGTGGTGAA 60.251 50.000 12.24 0.37 41.32 3.18
6742 8137 0.959867 CATTGGGCACATCGTGGTGA 60.960 55.000 12.24 0.00 41.32 4.02
6743 8138 1.243342 ACATTGGGCACATCGTGGTG 61.243 55.000 0.00 5.11 41.72 4.17
6744 8139 0.960364 GACATTGGGCACATCGTGGT 60.960 55.000 0.00 0.00 33.64 4.16
6745 8140 1.802636 GACATTGGGCACATCGTGG 59.197 57.895 0.00 0.00 33.64 4.94
6746 8141 1.018752 TCGACATTGGGCACATCGTG 61.019 55.000 10.04 2.95 36.51 4.35
6747 8142 0.740868 CTCGACATTGGGCACATCGT 60.741 55.000 10.04 0.17 34.47 3.73
6748 8143 1.431488 CCTCGACATTGGGCACATCG 61.431 60.000 4.04 4.04 0.00 3.84
6749 8144 0.107703 TCCTCGACATTGGGCACATC 60.108 55.000 0.00 0.00 0.00 3.06
6750 8145 0.107508 CTCCTCGACATTGGGCACAT 60.108 55.000 0.00 0.00 0.00 3.21
6751 8146 1.296392 CTCCTCGACATTGGGCACA 59.704 57.895 0.00 0.00 0.00 4.57
6752 8147 0.535335 TACTCCTCGACATTGGGCAC 59.465 55.000 0.00 0.00 0.00 5.01
6753 8148 0.535335 GTACTCCTCGACATTGGGCA 59.465 55.000 0.00 0.00 0.00 5.36
6754 8149 0.535335 TGTACTCCTCGACATTGGGC 59.465 55.000 0.00 0.00 0.00 5.36
6755 8150 1.134788 GGTGTACTCCTCGACATTGGG 60.135 57.143 6.72 0.00 0.00 4.12
6756 8151 1.469251 CGGTGTACTCCTCGACATTGG 60.469 57.143 11.98 0.00 0.00 3.16
6757 8152 1.469251 CCGGTGTACTCCTCGACATTG 60.469 57.143 11.98 0.00 0.00 2.82
6758 8153 0.815734 CCGGTGTACTCCTCGACATT 59.184 55.000 11.98 0.00 0.00 2.71
6759 8154 0.323178 ACCGGTGTACTCCTCGACAT 60.323 55.000 6.12 0.00 0.00 3.06
6760 8155 0.957395 GACCGGTGTACTCCTCGACA 60.957 60.000 14.63 0.00 0.00 4.35
6761 8156 0.957395 TGACCGGTGTACTCCTCGAC 60.957 60.000 14.63 0.00 0.00 4.20
6762 8157 0.250858 TTGACCGGTGTACTCCTCGA 60.251 55.000 14.63 0.00 0.00 4.04
6763 8158 0.109412 GTTGACCGGTGTACTCCTCG 60.109 60.000 14.63 4.68 0.00 4.63
6884 8444 0.871722 CGGAATGTGGTTTCTTCGCA 59.128 50.000 0.00 0.00 0.00 5.10
6918 8478 3.029570 TCTGACCTCACTCCATGATCAG 58.970 50.000 0.09 0.00 42.36 2.90
7045 8605 1.134220 TCCGGCAGATAACCATCAACC 60.134 52.381 0.00 0.00 33.21 3.77
7112 8672 4.273318 GTTTTTCATAGGCTGACTGGGAT 58.727 43.478 0.00 0.00 32.17 3.85
7330 8890 1.406539 ACAAGCACACTCCAGCAAAAG 59.593 47.619 0.00 0.00 0.00 2.27
7331 8891 1.473258 ACAAGCACACTCCAGCAAAA 58.527 45.000 0.00 0.00 0.00 2.44
7332 8892 1.473258 AACAAGCACACTCCAGCAAA 58.527 45.000 0.00 0.00 0.00 3.68
7373 8933 4.227300 AGTTTCCACACCAGATTATAGGCA 59.773 41.667 0.00 0.00 0.00 4.75
7374 8934 4.781934 AGTTTCCACACCAGATTATAGGC 58.218 43.478 0.00 0.00 0.00 3.93
7375 8935 6.766467 GGTAAGTTTCCACACCAGATTATAGG 59.234 42.308 0.00 0.00 0.00 2.57
7376 8936 6.766467 GGGTAAGTTTCCACACCAGATTATAG 59.234 42.308 0.56 0.00 32.42 1.31
7377 8937 6.215841 TGGGTAAGTTTCCACACCAGATTATA 59.784 38.462 0.56 0.00 32.42 0.98
7378 8938 5.014755 TGGGTAAGTTTCCACACCAGATTAT 59.985 40.000 0.56 0.00 32.42 1.28
7379 8939 4.351407 TGGGTAAGTTTCCACACCAGATTA 59.649 41.667 0.56 0.00 32.42 1.75
7380 8940 3.139397 TGGGTAAGTTTCCACACCAGATT 59.861 43.478 0.56 0.00 32.42 2.40
7381 8941 2.714250 TGGGTAAGTTTCCACACCAGAT 59.286 45.455 0.56 0.00 32.42 2.90
7382 8942 2.128535 TGGGTAAGTTTCCACACCAGA 58.871 47.619 0.56 0.00 32.42 3.86
7383 8943 2.649531 TGGGTAAGTTTCCACACCAG 57.350 50.000 0.56 0.00 32.42 4.00
7389 8949 5.617252 CTTACTTCTGTGGGTAAGTTTCCA 58.383 41.667 0.56 0.00 39.67 3.53
7390 8950 4.454847 GCTTACTTCTGTGGGTAAGTTTCC 59.545 45.833 12.39 0.00 43.73 3.13
7391 8951 5.061179 TGCTTACTTCTGTGGGTAAGTTTC 58.939 41.667 12.39 0.69 43.73 2.78
7392 8952 5.043737 TGCTTACTTCTGTGGGTAAGTTT 57.956 39.130 12.39 0.00 43.73 2.66
7393 8953 4.347000 TCTGCTTACTTCTGTGGGTAAGTT 59.653 41.667 12.39 0.00 43.73 2.66
7394 8954 3.901844 TCTGCTTACTTCTGTGGGTAAGT 59.098 43.478 12.39 0.00 43.73 2.24
7395 8955 4.537135 TCTGCTTACTTCTGTGGGTAAG 57.463 45.455 8.07 8.07 44.29 2.34
7396 8956 4.347000 ACTTCTGCTTACTTCTGTGGGTAA 59.653 41.667 0.00 0.00 0.00 2.85
7430 8990 3.134127 ATTTGCTCGGCCCGCTTC 61.134 61.111 12.38 0.00 0.00 3.86
7459 9019 3.878778 AGACTGGCATTCACTGGATTAC 58.121 45.455 7.63 0.00 0.00 1.89
7498 9071 5.652994 TTACCACATACAAATTTGGAGCC 57.347 39.130 21.74 0.00 35.28 4.70
7547 9123 3.005897 TGAAGAAACCTTCGAGTCTGGAG 59.994 47.826 0.00 0.00 42.19 3.86
7570 9147 5.720041 AGGGTCACTACAAGTCTAGCATAAA 59.280 40.000 0.00 0.00 0.00 1.40
7628 9209 3.242413 CCAACGATTCGACCATTCACATC 60.242 47.826 13.95 0.00 0.00 3.06
7630 9211 2.073056 CCAACGATTCGACCATTCACA 58.927 47.619 13.95 0.00 0.00 3.58
7643 9224 5.424252 TCCTGATAAAAGAGGTACCAACGAT 59.576 40.000 15.94 0.00 0.00 3.73
7661 9260 7.707624 TCAAATTTTGAGTTAGCATCCTGAT 57.292 32.000 7.74 0.00 34.08 2.90
7688 9287 4.708868 TCGACAAAACTTGTTCTCATCG 57.291 40.909 0.00 0.00 45.52 3.84
7720 9320 2.384828 ACTACATACATGCCCTCGACA 58.615 47.619 0.00 0.00 0.00 4.35
7761 9361 5.478407 TCGACACAAAGCTCAATCTTCATA 58.522 37.500 0.00 0.00 0.00 2.15
7762 9362 4.318332 TCGACACAAAGCTCAATCTTCAT 58.682 39.130 0.00 0.00 0.00 2.57
7763 9363 3.727726 TCGACACAAAGCTCAATCTTCA 58.272 40.909 0.00 0.00 0.00 3.02
7791 9566 4.424626 CTCTAACAAAGCAGCGTGAGATA 58.575 43.478 6.17 0.00 0.00 1.98
7802 9577 1.324736 CCACGATCGCTCTAACAAAGC 59.675 52.381 16.60 0.00 36.38 3.51
7821 9596 4.334759 GGAAGAGTATTCCGGTAAAAAGCC 59.665 45.833 0.00 0.00 0.00 4.35
7827 9602 3.716431 AGTGGGAAGAGTATTCCGGTAA 58.284 45.455 10.37 0.00 39.46 2.85
7885 9661 6.340522 TCAAGGGTTTACGTACTTTATAGCC 58.659 40.000 0.00 0.00 0.00 3.93
7886 9662 7.832503 TTCAAGGGTTTACGTACTTTATAGC 57.167 36.000 0.00 0.00 0.00 2.97
7890 9666 8.674263 TCAAATTCAAGGGTTTACGTACTTTA 57.326 30.769 0.00 0.00 0.00 1.85
7891 9667 7.571080 TCAAATTCAAGGGTTTACGTACTTT 57.429 32.000 0.00 0.00 0.00 2.66
7892 9668 7.283807 ACTTCAAATTCAAGGGTTTACGTACTT 59.716 33.333 0.00 0.00 0.00 2.24
7893 9669 6.769341 ACTTCAAATTCAAGGGTTTACGTACT 59.231 34.615 0.00 0.00 0.00 2.73
7894 9670 6.962686 ACTTCAAATTCAAGGGTTTACGTAC 58.037 36.000 0.00 0.00 0.00 3.67
7907 9705 2.100584 ACGCCAAGCAACTTCAAATTCA 59.899 40.909 0.00 0.00 0.00 2.57
7921 9719 0.721718 GACTGGATTCGAACGCCAAG 59.278 55.000 18.84 15.29 0.00 3.61
7927 9725 3.186613 GTCTTGTTGGACTGGATTCGAAC 59.813 47.826 0.00 0.00 35.43 3.95
7954 9753 1.192146 TTCCACTTCCTGGGTCCGAG 61.192 60.000 0.00 0.00 41.06 4.63
7955 9754 1.152204 TTCCACTTCCTGGGTCCGA 60.152 57.895 0.00 0.00 41.06 4.55
7985 9784 2.295253 ACCTAGTGTTACGAGCATGC 57.705 50.000 10.51 10.51 0.00 4.06
7994 9793 6.842280 TCCATAGCTGGATTTACCTAGTGTTA 59.158 38.462 0.00 0.00 46.95 2.41
7997 9796 5.808366 TCCATAGCTGGATTTACCTAGTG 57.192 43.478 0.00 0.00 46.95 2.74
8026 10024 9.758651 GTGAAAAACCTTCAAATGGTAGTTAAT 57.241 29.630 0.00 0.00 36.69 1.40
8027 10025 8.198778 GGTGAAAAACCTTCAAATGGTAGTTAA 58.801 33.333 0.00 0.00 46.55 2.01
8029 10027 6.578944 GGTGAAAAACCTTCAAATGGTAGTT 58.421 36.000 0.00 0.00 46.55 2.24
8083 10081 9.250624 GAGAATTTAGCGAGTGTTTATCTATGT 57.749 33.333 0.00 0.00 0.00 2.29
8084 10082 9.249457 TGAGAATTTAGCGAGTGTTTATCTATG 57.751 33.333 0.00 0.00 0.00 2.23
8085 10083 9.817809 TTGAGAATTTAGCGAGTGTTTATCTAT 57.182 29.630 0.00 0.00 0.00 1.98
8086 10084 9.817809 ATTGAGAATTTAGCGAGTGTTTATCTA 57.182 29.630 0.00 0.00 0.00 1.98
8087 10085 8.723942 ATTGAGAATTTAGCGAGTGTTTATCT 57.276 30.769 0.00 0.00 0.00 1.98
8088 10086 8.821894 AGATTGAGAATTTAGCGAGTGTTTATC 58.178 33.333 0.00 0.00 0.00 1.75
8089 10087 8.723942 AGATTGAGAATTTAGCGAGTGTTTAT 57.276 30.769 0.00 0.00 0.00 1.40
8118 10116 9.952030 TGAAACATGTAGGATGTACATTCTTAA 57.048 29.630 21.80 10.94 36.13 1.85
8125 10123 6.288294 GGCTATGAAACATGTAGGATGTACA 58.712 40.000 0.00 0.00 0.00 2.90
8141 10139 4.155826 GCAATGCATAATACGGGCTATGAA 59.844 41.667 0.00 0.00 0.00 2.57
8150 10148 9.998381 CAAAATATTGAAGCAATGCATAATACG 57.002 29.630 8.35 0.00 38.94 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.