Multiple sequence alignment - TraesCS5D01G446300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G446300 chr5D 100.000 4405 0 0 1 4405 496590594 496586190 0.000000e+00 8135.0
1 TraesCS5D01G446300 chr5D 91.304 115 8 2 3034 3148 328911545 328911657 5.900000e-34 156.0
2 TraesCS5D01G446300 chr5B 94.050 2252 71 24 856 3049 615201473 615199227 0.000000e+00 3358.0
3 TraesCS5D01G446300 chr5B 96.645 924 30 1 3143 4065 615199228 615198305 0.000000e+00 1533.0
4 TraesCS5D01G446300 chr5B 93.759 721 37 6 1 717 615202256 615201540 0.000000e+00 1075.0
5 TraesCS5D01G446300 chr5B 85.792 183 4 2 4083 4265 615198121 615197961 1.630000e-39 174.0
6 TraesCS5D01G446300 chr5B 92.661 109 8 0 3040 3148 306435390 306435282 1.640000e-34 158.0
7 TraesCS5D01G446300 chr1A 94.213 1486 59 13 990 2452 537356828 537355347 0.000000e+00 2242.0
8 TraesCS5D01G446300 chr1A 90.785 293 19 4 3382 3673 537354583 537354298 6.910000e-103 385.0
9 TraesCS5D01G446300 chr1A 92.462 199 13 2 3227 3424 537354780 537354583 2.590000e-72 283.0
10 TraesCS5D01G446300 chr1A 76.712 219 42 8 26 242 11253461 11253672 3.600000e-21 113.0
11 TraesCS5D01G446300 chr1D 94.718 1401 67 6 986 2383 360093406 360094802 0.000000e+00 2170.0
12 TraesCS5D01G446300 chr1D 88.821 492 33 7 3206 3684 360095324 360095806 6.350000e-163 584.0
13 TraesCS5D01G446300 chr1D 82.650 317 33 11 2687 2995 360094935 360095237 1.220000e-65 261.0
14 TraesCS5D01G446300 chr1D 92.593 54 3 1 4083 4135 408239023 408239076 4.720000e-10 76.8
15 TraesCS5D01G446300 chr1B 94.654 1403 69 5 984 2383 482164026 482165425 0.000000e+00 2170.0
16 TraesCS5D01G446300 chr1B 87.935 431 35 9 3206 3633 482165948 482166364 3.960000e-135 492.0
17 TraesCS5D01G446300 chr1B 94.340 106 6 0 3044 3149 328139786 328139681 3.530000e-36 163.0
18 TraesCS5D01G446300 chr1B 97.222 36 1 0 4000 4035 466926175 466926210 1.320000e-05 62.1
19 TraesCS5D01G446300 chr5A 96.060 1269 41 6 963 2229 620563148 620561887 0.000000e+00 2058.0
20 TraesCS5D01G446300 chr5A 94.844 737 28 5 3144 3878 620561187 620560459 0.000000e+00 1142.0
21 TraesCS5D01G446300 chr5A 88.148 675 35 16 2398 3047 620561843 620561189 0.000000e+00 761.0
22 TraesCS5D01G446300 chr5A 98.582 141 2 0 4265 4405 620560069 620559929 2.630000e-62 250.0
23 TraesCS5D01G446300 chr5A 80.159 252 7 11 4002 4250 620560333 620560122 9.870000e-32 148.0
24 TraesCS5D01G446300 chr5A 97.015 67 2 0 2331 2397 620561877 620561811 3.600000e-21 113.0
25 TraesCS5D01G446300 chr2A 89.256 726 65 7 1 717 472359178 472359899 0.000000e+00 896.0
26 TraesCS5D01G446300 chr2A 81.098 328 59 2 1778 2105 385913921 385914245 4.370000e-65 259.0
27 TraesCS5D01G446300 chr2A 90.756 119 11 0 816 934 472360082 472360200 4.560000e-35 159.0
28 TraesCS5D01G446300 chr2A 92.537 67 4 1 4285 4350 40618502 40618436 1.300000e-15 95.3
29 TraesCS5D01G446300 chr2A 90.411 73 3 2 718 790 472359957 472360025 4.690000e-15 93.5
30 TraesCS5D01G446300 chr7B 89.039 593 40 13 2029 2600 421501187 421500599 0.000000e+00 712.0
31 TraesCS5D01G446300 chr7B 89.180 573 39 3 2029 2580 632609558 632610128 0.000000e+00 693.0
32 TraesCS5D01G446300 chr7B 94.340 106 5 1 3041 3145 747370736 747370631 1.270000e-35 161.0
33 TraesCS5D01G446300 chr7B 94.444 36 2 0 4000 4035 733368622 733368657 6.150000e-04 56.5
34 TraesCS5D01G446300 chrUn 91.212 330 26 2 390 717 420646383 420646055 3.130000e-121 446.0
35 TraesCS5D01G446300 chrUn 90.278 72 0 4 718 784 460033647 460033716 2.180000e-13 87.9
36 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597801217 597801545 3.130000e-121 446.0
37 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597804760 597805088 3.130000e-121 446.0
38 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597806167 597806495 3.130000e-121 446.0
39 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597807611 597807939 3.130000e-121 446.0
40 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597808333 597808661 3.130000e-121 446.0
41 TraesCS5D01G446300 chr2D 91.212 330 26 2 390 717 597809738 597810066 3.130000e-121 446.0
42 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597802298 597802367 2.180000e-13 87.9
43 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597808691 597808760 2.180000e-13 87.9
44 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597810819 597810888 2.180000e-13 87.9
45 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597815042 597815111 2.180000e-13 87.9
46 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597816130 597816199 2.180000e-13 87.9
47 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597819018 597819087 2.180000e-13 87.9
48 TraesCS5D01G446300 chr2D 90.278 72 0 4 718 784 597819741 597819810 2.180000e-13 87.9
49 TraesCS5D01G446300 chr3A 96.503 143 3 2 4265 4405 632551270 632551128 7.370000e-58 235.0
50 TraesCS5D01G446300 chr3A 91.241 137 7 4 3760 3891 632554564 632554428 9.730000e-42 182.0
51 TraesCS5D01G446300 chr3D 93.793 145 5 1 4265 4405 489165870 489165726 9.600000e-52 215.0
52 TraesCS5D01G446300 chr3D 94.074 135 5 3 3760 3891 489176431 489176297 7.470000e-48 202.0
53 TraesCS5D01G446300 chr3D 91.473 129 10 1 4140 4267 489166033 489165905 4.530000e-40 176.0
54 TraesCS5D01G446300 chr3D 94.805 77 2 1 3926 4000 489176184 489176108 7.740000e-23 119.0
55 TraesCS5D01G446300 chr3D 96.875 64 2 0 4083 4146 489166125 489166062 1.680000e-19 108.0
56 TraesCS5D01G446300 chr4B 95.050 101 5 0 3045 3145 32922791 32922891 4.560000e-35 159.0
57 TraesCS5D01G446300 chr4B 97.872 47 1 0 4298 4344 541920156 541920202 1.020000e-11 82.4
58 TraesCS5D01G446300 chr4A 90.244 123 11 1 3041 3162 69316930 69316808 4.560000e-35 159.0
59 TraesCS5D01G446300 chr4A 96.970 66 2 0 4285 4350 27666111 27666176 1.300000e-20 111.0
60 TraesCS5D01G446300 chr6B 94.175 103 6 0 3042 3144 424084086 424084188 1.640000e-34 158.0
61 TraesCS5D01G446300 chr6B 94.175 103 6 0 3042 3144 424306784 424306886 1.640000e-34 158.0
62 TraesCS5D01G446300 chr6B 93.976 83 5 0 4185 4267 136933867 136933785 4.630000e-25 126.0
63 TraesCS5D01G446300 chr6B 83.571 140 7 5 4265 4404 136933751 136933628 2.780000e-22 117.0
64 TraesCS5D01G446300 chr2B 92.661 109 8 0 3037 3145 458623250 458623142 1.640000e-34 158.0
65 TraesCS5D01G446300 chr4D 95.455 66 2 1 4285 4349 438208668 438208733 2.170000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G446300 chr5D 496586190 496590594 4404 True 8135.000000 8135 100.000000 1 4405 1 chr5D.!!$R1 4404
1 TraesCS5D01G446300 chr5B 615197961 615202256 4295 True 1535.000000 3358 92.561500 1 4265 4 chr5B.!!$R2 4264
2 TraesCS5D01G446300 chr1A 537354298 537356828 2530 True 970.000000 2242 92.486667 990 3673 3 chr1A.!!$R1 2683
3 TraesCS5D01G446300 chr1D 360093406 360095806 2400 False 1005.000000 2170 88.729667 986 3684 3 chr1D.!!$F2 2698
4 TraesCS5D01G446300 chr1B 482164026 482166364 2338 False 1331.000000 2170 91.294500 984 3633 2 chr1B.!!$F2 2649
5 TraesCS5D01G446300 chr5A 620559929 620563148 3219 True 745.333333 2058 92.468000 963 4405 6 chr5A.!!$R1 3442
6 TraesCS5D01G446300 chr2A 472359178 472360200 1022 False 382.833333 896 90.141000 1 934 3 chr2A.!!$F2 933
7 TraesCS5D01G446300 chr7B 421500599 421501187 588 True 712.000000 712 89.039000 2029 2600 1 chr7B.!!$R1 571
8 TraesCS5D01G446300 chr7B 632609558 632610128 570 False 693.000000 693 89.180000 2029 2580 1 chr7B.!!$F1 551
9 TraesCS5D01G446300 chr2D 597801217 597810888 9671 False 326.633333 446 90.900667 390 784 9 chr2D.!!$F1 394
10 TraesCS5D01G446300 chr3A 632551128 632554564 3436 True 208.500000 235 93.872000 3760 4405 2 chr3A.!!$R1 645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 317 0.322456 GATACACACTGGGCTGCCAA 60.322 55.0 22.05 8.66 0.00 4.52 F
885 8113 0.673644 CCCACTAAGCCCACGAACTG 60.674 60.0 0.00 0.00 0.00 3.16 F
2267 9508 0.035534 TGCCTGTATCGTGCATGGTT 60.036 50.0 5.98 0.00 0.00 3.67 F
2932 10474 1.081892 CCTGAAGGACATGAACTGCG 58.918 55.0 0.00 0.00 37.39 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2162 9393 3.438297 TGCTGAAGAGTATTACGAGCC 57.562 47.619 0.00 0.0 0.00 4.70 R
2763 10295 4.390603 CCATCAAAGAAATTGCACATGGTG 59.609 41.667 0.00 0.0 36.70 4.17 R
3127 10699 0.044092 TGCTACTCCCTCCATCCCAA 59.956 55.000 0.00 0.0 0.00 4.12 R
4136 15354 1.954528 CTGCAGTTTGCTGGACCTG 59.045 57.895 5.25 0.0 45.31 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
306 317 0.322456 GATACACACTGGGCTGCCAA 60.322 55.000 22.05 8.66 0.00 4.52
440 7567 2.407616 CGTCGTGCTGCCTATCGA 59.592 61.111 0.00 0.00 0.00 3.59
638 7767 7.759433 AGTTTTTAAGACTGTCCAATTTGTGTG 59.241 33.333 3.76 0.00 0.00 3.82
650 7779 4.681025 CCAATTTGTGTGATTCGTGAAAGG 59.319 41.667 0.00 0.00 0.00 3.11
660 7789 5.455525 GTGATTCGTGAAAGGAACAGTTTTG 59.544 40.000 0.00 0.00 44.19 2.44
672 7801 1.750778 ACAGTTTTGCACTCAACCTGG 59.249 47.619 0.00 0.00 36.48 4.45
701 7830 5.215160 CAGTGCAAACAGTAGAAACAATCC 58.785 41.667 0.00 0.00 0.00 3.01
777 7967 7.219322 TGTTAGTGCTCTCGGTAGTACATATA 58.781 38.462 2.06 0.00 34.85 0.86
778 7968 7.172190 TGTTAGTGCTCTCGGTAGTACATATAC 59.828 40.741 2.06 0.00 34.85 1.47
821 8049 7.810766 ATACACACACACACAAAAAGAAAAG 57.189 32.000 0.00 0.00 0.00 2.27
885 8113 0.673644 CCCACTAAGCCCACGAACTG 60.674 60.000 0.00 0.00 0.00 3.16
913 8141 1.526575 ATGCGAAACCCCAGCAACTG 61.527 55.000 0.00 0.00 44.51 3.16
1206 8437 3.062466 CAGACCTCGGCCGAGTCA 61.062 66.667 43.69 18.83 40.44 3.41
1869 9100 0.967380 CCAGGCCCAAGATGACCAAC 60.967 60.000 0.00 0.00 0.00 3.77
2122 9353 0.695803 ATGCTACTCCCCCTTCCCTG 60.696 60.000 0.00 0.00 0.00 4.45
2166 9397 6.683974 ATTACACATGATTACAGTTGGCTC 57.316 37.500 0.00 0.00 0.00 4.70
2205 9436 7.172532 AGCAATTGTTGAATGTTCGTACTAAGA 59.827 33.333 7.40 0.00 0.00 2.10
2267 9508 0.035534 TGCCTGTATCGTGCATGGTT 60.036 50.000 5.98 0.00 0.00 3.67
2333 9574 3.616219 TGTACTGTTGTATGGAATGCCC 58.384 45.455 0.00 0.00 0.00 5.36
2544 9827 3.221771 TGCTATTCAAAGTGCCTTGTGT 58.778 40.909 0.00 0.00 0.00 3.72
2545 9828 3.004629 TGCTATTCAAAGTGCCTTGTGTG 59.995 43.478 0.00 0.00 0.00 3.82
2580 10055 7.303182 TGTACTGTTATATATGGAGCAAGCT 57.697 36.000 0.00 0.00 0.00 3.74
2583 10058 7.013823 ACTGTTATATATGGAGCAAGCTCAT 57.986 36.000 22.19 15.45 44.40 2.90
2593 10068 3.691118 GGAGCAAGCTCATCAATTGTGTA 59.309 43.478 22.19 0.00 44.40 2.90
2671 10203 2.159517 GGCGCCTGTCTTGATTTGTTAG 60.160 50.000 22.15 0.00 0.00 2.34
2672 10204 2.484264 GCGCCTGTCTTGATTTGTTAGT 59.516 45.455 0.00 0.00 0.00 2.24
2673 10205 3.058224 GCGCCTGTCTTGATTTGTTAGTT 60.058 43.478 0.00 0.00 0.00 2.24
2674 10206 4.556699 GCGCCTGTCTTGATTTGTTAGTTT 60.557 41.667 0.00 0.00 0.00 2.66
2675 10207 5.147162 CGCCTGTCTTGATTTGTTAGTTTC 58.853 41.667 0.00 0.00 0.00 2.78
2676 10208 5.049405 CGCCTGTCTTGATTTGTTAGTTTCT 60.049 40.000 0.00 0.00 0.00 2.52
2677 10209 6.374578 GCCTGTCTTGATTTGTTAGTTTCTC 58.625 40.000 0.00 0.00 0.00 2.87
2678 10210 6.205658 GCCTGTCTTGATTTGTTAGTTTCTCT 59.794 38.462 0.00 0.00 0.00 3.10
2679 10211 7.572168 GCCTGTCTTGATTTGTTAGTTTCTCTC 60.572 40.741 0.00 0.00 0.00 3.20
2680 10212 7.359598 CCTGTCTTGATTTGTTAGTTTCTCTCG 60.360 40.741 0.00 0.00 0.00 4.04
2681 10213 7.207383 TGTCTTGATTTGTTAGTTTCTCTCGA 58.793 34.615 0.00 0.00 0.00 4.04
2794 10326 6.203201 GCAATTTCTTTGATGGCATGCCAC 62.203 45.833 40.78 30.95 41.34 5.01
2932 10474 1.081892 CCTGAAGGACATGAACTGCG 58.918 55.000 0.00 0.00 37.39 5.18
2961 10503 2.680339 GCTGTACTGAAAATCTGAGGCC 59.320 50.000 3.61 0.00 0.00 5.19
2978 10521 6.537301 TCTGAGGCCGTATTGTTTAACATTAG 59.463 38.462 0.00 0.00 0.00 1.73
2995 10538 6.432607 ACATTAGTCATGACTGCATTTGAG 57.567 37.500 33.76 16.98 42.52 3.02
3053 10625 9.127277 TGTTATTGCTGGTTAATTAATACTCCC 57.873 33.333 0.31 0.00 0.00 4.30
3054 10626 9.350951 GTTATTGCTGGTTAATTAATACTCCCT 57.649 33.333 0.31 0.00 0.00 4.20
3055 10627 9.569122 TTATTGCTGGTTAATTAATACTCCCTC 57.431 33.333 0.31 0.00 0.00 4.30
3056 10628 5.937111 TGCTGGTTAATTAATACTCCCTCC 58.063 41.667 0.31 0.00 0.00 4.30
3057 10629 4.995487 GCTGGTTAATTAATACTCCCTCCG 59.005 45.833 0.31 0.00 0.00 4.63
3058 10630 5.454329 GCTGGTTAATTAATACTCCCTCCGT 60.454 44.000 0.31 0.00 0.00 4.69
3059 10631 6.165700 TGGTTAATTAATACTCCCTCCGTC 57.834 41.667 0.31 0.00 0.00 4.79
3060 10632 5.070847 TGGTTAATTAATACTCCCTCCGTCC 59.929 44.000 0.31 0.00 0.00 4.79
3061 10633 5.512060 GGTTAATTAATACTCCCTCCGTCCC 60.512 48.000 0.31 0.00 0.00 4.46
3062 10634 2.852714 TTAATACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
3063 10635 2.852714 TAATACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
3064 10636 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3065 10637 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3066 10638 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3067 10639 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3068 10640 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3069 10641 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3070 10642 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3071 10643 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3072 10644 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3073 10645 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3074 10646 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3075 10647 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3076 10648 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
3077 10649 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3078 10650 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
3079 10651 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
3080 10652 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
3081 10653 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
3082 10654 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
3083 10655 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
3084 10656 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
3085 10657 7.040409 CCCAAAATAAGTGTCTCAAGCTTAGTT 60.040 37.037 0.00 0.00 35.44 2.24
3086 10658 8.017946 CCAAAATAAGTGTCTCAAGCTTAGTTC 58.982 37.037 0.00 0.00 33.67 3.01
3087 10659 8.559536 CAAAATAAGTGTCTCAAGCTTAGTTCA 58.440 33.333 0.00 0.00 33.67 3.18
3088 10660 8.677148 AAATAAGTGTCTCAAGCTTAGTTCAA 57.323 30.769 0.00 0.00 30.44 2.69
3089 10661 8.677148 AATAAGTGTCTCAAGCTTAGTTCAAA 57.323 30.769 0.00 0.00 0.00 2.69
3090 10662 8.854614 ATAAGTGTCTCAAGCTTAGTTCAAAT 57.145 30.769 0.00 0.00 0.00 2.32
3091 10663 7.573968 AAGTGTCTCAAGCTTAGTTCAAATT 57.426 32.000 0.00 0.00 0.00 1.82
3092 10664 7.573968 AGTGTCTCAAGCTTAGTTCAAATTT 57.426 32.000 0.00 0.00 0.00 1.82
3093 10665 7.643579 AGTGTCTCAAGCTTAGTTCAAATTTC 58.356 34.615 0.00 0.00 0.00 2.17
3094 10666 7.500559 AGTGTCTCAAGCTTAGTTCAAATTTCT 59.499 33.333 0.00 0.00 0.00 2.52
3095 10667 8.774586 GTGTCTCAAGCTTAGTTCAAATTTCTA 58.225 33.333 0.00 0.00 0.00 2.10
3096 10668 8.774586 TGTCTCAAGCTTAGTTCAAATTTCTAC 58.225 33.333 0.00 0.00 0.00 2.59
3097 10669 8.994170 GTCTCAAGCTTAGTTCAAATTTCTACT 58.006 33.333 0.00 6.86 0.00 2.57
3102 10674 8.710835 AGCTTAGTTCAAATTTCTACTAGAGC 57.289 34.615 19.69 19.69 33.03 4.09
3103 10675 8.536175 AGCTTAGTTCAAATTTCTACTAGAGCT 58.464 33.333 21.60 21.60 35.38 4.09
3104 10676 9.804758 GCTTAGTTCAAATTTCTACTAGAGCTA 57.195 33.333 19.83 11.23 31.78 3.32
3116 10688 8.859236 TTCTACTAGAGCTAGTACAAAGTTGA 57.141 34.615 12.18 5.29 43.98 3.18
3117 10689 8.495361 TCTACTAGAGCTAGTACAAAGTTGAG 57.505 38.462 12.18 3.48 43.98 3.02
3118 10690 8.319881 TCTACTAGAGCTAGTACAAAGTTGAGA 58.680 37.037 12.18 5.44 43.98 3.27
3119 10691 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
3120 10692 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
3121 10693 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
3122 10694 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
3123 10695 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
3124 10696 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
3125 10697 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
3126 10698 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
3127 10699 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
3130 10702 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
3131 10703 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
3132 10704 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
3133 10705 7.287696 ACAAAGTTGAGACACTTATTTTGGGAT 59.712 33.333 0.00 0.00 35.87 3.85
3134 10706 6.824305 AGTTGAGACACTTATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
3135 10707 5.711976 AGTTGAGACACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 0.00 3.51
3136 10708 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
3137 10709 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
3138 10710 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
3139 10711 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
3140 10712 3.596046 ACACTTATTTTGGGATGGAGGGA 59.404 43.478 0.00 0.00 0.00 4.20
3141 10713 4.210331 CACTTATTTTGGGATGGAGGGAG 58.790 47.826 0.00 0.00 0.00 4.30
3362 10935 1.166129 TCTCTGACAGCGACTACACC 58.834 55.000 0.00 0.00 0.00 4.16
3531 11186 5.181245 GCTGTTTTGGTAGCTGTTTATCTCA 59.819 40.000 0.00 0.00 36.99 3.27
3585 11240 8.413309 AGACATGTTATATGGCATGCTTTATT 57.587 30.769 18.92 1.90 44.43 1.40
3792 11495 8.981647 ACTGCTTTATCATTGTTGATTTTGTTC 58.018 29.630 0.00 0.00 42.61 3.18
3955 12353 9.249457 GCTTTTAGGTTGAAAATAATGATAGCC 57.751 33.333 0.00 0.00 0.00 3.93
3973 12371 2.641815 AGCCTGTTCTGAGGATTGAGTT 59.358 45.455 0.00 0.00 34.69 3.01
4078 15240 3.476552 ACATGTCTACAACAACACCCTG 58.523 45.455 0.00 0.00 42.37 4.45
4136 15354 0.098376 GCTTGCATCTGCTACACTGC 59.902 55.000 3.53 0.00 42.66 4.40
4177 15436 4.838986 GGTTACCATAGCATTCTCTAGGGA 59.161 45.833 8.27 0.00 41.63 4.20
4178 15437 5.307196 GGTTACCATAGCATTCTCTAGGGAA 59.693 44.000 7.69 7.69 41.63 3.97
4179 15438 6.459923 GTTACCATAGCATTCTCTAGGGAAG 58.540 44.000 11.47 4.51 41.63 3.46
4180 15439 4.561752 ACCATAGCATTCTCTAGGGAAGT 58.438 43.478 11.47 0.00 41.63 3.01
4181 15440 5.716979 ACCATAGCATTCTCTAGGGAAGTA 58.283 41.667 11.47 3.03 41.63 2.24
4182 15441 5.777732 ACCATAGCATTCTCTAGGGAAGTAG 59.222 44.000 11.47 4.68 41.63 2.57
4236 15495 2.561478 AATTGTTGTACACGAGGCCT 57.439 45.000 3.86 3.86 0.00 5.19
4252 15511 1.404391 GGCCTTTCATGCAGATCTGTG 59.596 52.381 23.38 14.84 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
258 269 5.844301 AAGCCGCAAACAGATTAAAATTG 57.156 34.783 0.00 0.00 0.00 2.32
306 317 1.831736 ACTGCGACTAGGTGCCTAAAT 59.168 47.619 6.07 0.00 0.00 1.40
435 7562 4.576873 CAGGCAGAGTTCTAGTCTTCGATA 59.423 45.833 0.00 0.00 0.00 2.92
440 7567 2.490115 CGACAGGCAGAGTTCTAGTCTT 59.510 50.000 0.00 0.00 0.00 3.01
535 7662 5.596836 AAGACCAAATTCTTTGCAACTGA 57.403 34.783 0.00 0.00 39.31 3.41
638 7767 4.441087 GCAAAACTGTTCCTTTCACGAATC 59.559 41.667 0.00 0.00 0.00 2.52
650 7779 3.438360 CAGGTTGAGTGCAAAACTGTTC 58.562 45.455 6.51 0.00 40.07 3.18
660 7789 1.282875 GTTTCGCCAGGTTGAGTGC 59.717 57.895 0.00 0.00 0.00 4.40
672 7801 2.286833 TCTACTGTTTGCACTGTTTCGC 59.713 45.455 0.00 0.00 36.53 4.70
701 7830 8.839310 ATTGATTCGTGAGATAATCTAAAGGG 57.161 34.615 0.00 0.00 41.60 3.95
790 7980 9.891828 CTTTTTGTGTGTGTGTGTATTATACAT 57.108 29.630 8.39 0.00 41.34 2.29
791 7981 9.110502 TCTTTTTGTGTGTGTGTGTATTATACA 57.889 29.630 0.29 0.29 36.08 2.29
792 7982 9.938670 TTCTTTTTGTGTGTGTGTGTATTATAC 57.061 29.630 0.00 0.00 0.00 1.47
794 7984 9.862371 TTTTCTTTTTGTGTGTGTGTGTATTAT 57.138 25.926 0.00 0.00 0.00 1.28
795 7985 9.347934 CTTTTCTTTTTGTGTGTGTGTGTATTA 57.652 29.630 0.00 0.00 0.00 0.98
796 7986 7.148656 GCTTTTCTTTTTGTGTGTGTGTGTATT 60.149 33.333 0.00 0.00 0.00 1.89
798 7988 5.631512 GCTTTTCTTTTTGTGTGTGTGTGTA 59.368 36.000 0.00 0.00 0.00 2.90
799 7989 4.447389 GCTTTTCTTTTTGTGTGTGTGTGT 59.553 37.500 0.00 0.00 0.00 3.72
800 7990 4.685628 AGCTTTTCTTTTTGTGTGTGTGTG 59.314 37.500 0.00 0.00 0.00 3.82
801 7991 4.881920 AGCTTTTCTTTTTGTGTGTGTGT 58.118 34.783 0.00 0.00 0.00 3.72
802 7992 4.030529 CGAGCTTTTCTTTTTGTGTGTGTG 59.969 41.667 0.00 0.00 0.00 3.82
845 8073 3.016474 GCGCTCGTGTTTCTGCTCC 62.016 63.158 0.00 0.00 0.00 4.70
891 8119 1.312371 TTGCTGGGGTTTCGCATAGC 61.312 55.000 0.00 0.00 35.25 2.97
2122 9353 9.056005 TGTAATAAGATATGAAACAGATGGCAC 57.944 33.333 0.00 0.00 0.00 5.01
2162 9393 3.438297 TGCTGAAGAGTATTACGAGCC 57.562 47.619 0.00 0.00 0.00 4.70
2166 9397 7.060600 TCAACAATTGCTGAAGAGTATTACG 57.939 36.000 9.07 0.00 0.00 3.18
2205 9436 7.544622 TGCTACACATAAAGACTTAGTCGAAT 58.455 34.615 6.73 0.00 37.67 3.34
2365 9606 6.040166 AGGCATTCCAGAATTGTTATCATCAC 59.960 38.462 0.00 0.00 33.74 3.06
2511 9794 7.253883 GCACTTTGAATAGCAAGCATCATAAAC 60.254 37.037 0.00 0.00 37.87 2.01
2580 10055 7.931407 AGTACACAGAAACTACACAATTGATGA 59.069 33.333 13.59 0.00 0.00 2.92
2583 10058 7.766738 TGAAGTACACAGAAACTACACAATTGA 59.233 33.333 13.59 0.00 0.00 2.57
2593 10068 7.328737 ACTACAAACTGAAGTACACAGAAACT 58.671 34.615 21.16 7.97 38.55 2.66
2674 10206 9.084164 GCTAACAAAACAAATATACTCGAGAGA 57.916 33.333 21.68 6.86 39.12 3.10
2675 10207 8.328864 GGCTAACAAAACAAATATACTCGAGAG 58.671 37.037 21.68 0.14 0.00 3.20
2676 10208 8.038944 AGGCTAACAAAACAAATATACTCGAGA 58.961 33.333 21.68 2.92 0.00 4.04
2677 10209 8.116753 CAGGCTAACAAAACAAATATACTCGAG 58.883 37.037 11.84 11.84 0.00 4.04
2678 10210 7.820386 TCAGGCTAACAAAACAAATATACTCGA 59.180 33.333 0.00 0.00 0.00 4.04
2679 10211 7.970384 TCAGGCTAACAAAACAAATATACTCG 58.030 34.615 0.00 0.00 0.00 4.18
2763 10295 4.390603 CCATCAAAGAAATTGCACATGGTG 59.609 41.667 0.00 0.00 36.70 4.17
2794 10326 8.771766 CACATTGGATACTTCAGATATTCAGTG 58.228 37.037 0.00 0.00 33.53 3.66
2932 10474 5.687285 CAGATTTTCAGTACAGCAAAACCAC 59.313 40.000 0.00 0.00 0.00 4.16
2961 10503 9.689075 CAGTCATGACTAATGTTAAACAATACG 57.311 33.333 27.44 5.82 40.20 3.06
2978 10521 3.373439 GGAGTCTCAAATGCAGTCATGAC 59.627 47.826 18.47 18.47 32.23 3.06
2995 10538 7.278868 CACATACAATTTCCTACTCTTGGAGTC 59.721 40.741 3.32 0.00 42.40 3.36
3047 10619 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3048 10620 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3049 10621 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3050 10622 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3051 10623 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3052 10624 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3053 10625 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3054 10626 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
3055 10627 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
3056 10628 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
3057 10629 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
3058 10630 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
3059 10631 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
3060 10632 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
3061 10633 8.559536 TGAACTAAGCTTGAGACACTTATTTTG 58.440 33.333 9.86 0.00 0.00 2.44
3062 10634 8.677148 TGAACTAAGCTTGAGACACTTATTTT 57.323 30.769 9.86 0.00 0.00 1.82
3063 10635 8.677148 TTGAACTAAGCTTGAGACACTTATTT 57.323 30.769 9.86 0.00 0.00 1.40
3064 10636 8.677148 TTTGAACTAAGCTTGAGACACTTATT 57.323 30.769 9.86 0.00 0.00 1.40
3065 10637 8.854614 ATTTGAACTAAGCTTGAGACACTTAT 57.145 30.769 9.86 0.00 0.00 1.73
3066 10638 8.677148 AATTTGAACTAAGCTTGAGACACTTA 57.323 30.769 9.86 0.00 0.00 2.24
3067 10639 7.573968 AATTTGAACTAAGCTTGAGACACTT 57.426 32.000 9.86 0.00 0.00 3.16
3068 10640 7.500559 AGAAATTTGAACTAAGCTTGAGACACT 59.499 33.333 9.86 0.00 0.00 3.55
3069 10641 7.643579 AGAAATTTGAACTAAGCTTGAGACAC 58.356 34.615 9.86 0.00 0.00 3.67
3070 10642 7.807977 AGAAATTTGAACTAAGCTTGAGACA 57.192 32.000 9.86 1.72 0.00 3.41
3071 10643 8.994170 AGTAGAAATTTGAACTAAGCTTGAGAC 58.006 33.333 9.86 0.00 0.00 3.36
3076 10648 9.157104 GCTCTAGTAGAAATTTGAACTAAGCTT 57.843 33.333 20.02 3.48 32.28 3.74
3077 10649 8.536175 AGCTCTAGTAGAAATTTGAACTAAGCT 58.464 33.333 21.81 21.81 35.94 3.74
3078 10650 8.710835 AGCTCTAGTAGAAATTTGAACTAAGC 57.289 34.615 19.89 19.89 33.56 3.09
3091 10663 8.859236 TCAACTTTGTACTAGCTCTAGTAGAA 57.141 34.615 17.47 17.47 45.97 2.10
3092 10664 8.319881 TCTCAACTTTGTACTAGCTCTAGTAGA 58.680 37.037 15.02 12.03 45.97 2.59
3093 10665 8.392612 GTCTCAACTTTGTACTAGCTCTAGTAG 58.607 40.741 15.02 9.20 45.97 2.57
3094 10666 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
3096 10668 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
3097 10669 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
3098 10670 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
3099 10671 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
3100 10672 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
3101 10673 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
3104 10676 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3105 10677 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
3106 10678 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
3107 10679 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
3108 10680 7.038154 TCCCAAAATAAGTGTCTCAACTTTG 57.962 36.000 0.00 0.00 40.77 2.77
3109 10681 7.255942 CCATCCCAAAATAAGTGTCTCAACTTT 60.256 37.037 0.00 0.00 40.77 2.66
3110 10682 6.209391 CCATCCCAAAATAAGTGTCTCAACTT 59.791 38.462 0.00 0.00 42.89 2.66
3111 10683 5.711976 CCATCCCAAAATAAGTGTCTCAACT 59.288 40.000 0.00 0.00 0.00 3.16
3112 10684 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
3113 10685 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
3114 10686 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
3115 10687 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
3116 10688 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
3117 10689 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
3118 10690 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
3119 10691 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
3120 10692 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
3121 10693 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
3122 10694 4.141251 GCTACTCCCTCCATCCCAAAATAA 60.141 45.833 0.00 0.00 0.00 1.40
3123 10695 3.394606 GCTACTCCCTCCATCCCAAAATA 59.605 47.826 0.00 0.00 0.00 1.40
3124 10696 2.175715 GCTACTCCCTCCATCCCAAAAT 59.824 50.000 0.00 0.00 0.00 1.82
3125 10697 1.564348 GCTACTCCCTCCATCCCAAAA 59.436 52.381 0.00 0.00 0.00 2.44
3126 10698 1.213296 GCTACTCCCTCCATCCCAAA 58.787 55.000 0.00 0.00 0.00 3.28
3127 10699 0.044092 TGCTACTCCCTCCATCCCAA 59.956 55.000 0.00 0.00 0.00 4.12
3128 10700 0.268869 ATGCTACTCCCTCCATCCCA 59.731 55.000 0.00 0.00 0.00 4.37
3129 10701 1.439543 AATGCTACTCCCTCCATCCC 58.560 55.000 0.00 0.00 0.00 3.85
3130 10702 2.708325 AGAAATGCTACTCCCTCCATCC 59.292 50.000 0.00 0.00 0.00 3.51
3131 10703 4.429854 AAGAAATGCTACTCCCTCCATC 57.570 45.455 0.00 0.00 0.00 3.51
3132 10704 4.870021 AAAGAAATGCTACTCCCTCCAT 57.130 40.909 0.00 0.00 0.00 3.41
3133 10705 4.042809 TGAAAAGAAATGCTACTCCCTCCA 59.957 41.667 0.00 0.00 0.00 3.86
3134 10706 4.589908 TGAAAAGAAATGCTACTCCCTCC 58.410 43.478 0.00 0.00 0.00 4.30
3135 10707 5.649831 ACATGAAAAGAAATGCTACTCCCTC 59.350 40.000 0.00 0.00 0.00 4.30
3136 10708 5.574188 ACATGAAAAGAAATGCTACTCCCT 58.426 37.500 0.00 0.00 0.00 4.20
3137 10709 5.904362 ACATGAAAAGAAATGCTACTCCC 57.096 39.130 0.00 0.00 0.00 4.30
3138 10710 6.587608 CCAAACATGAAAAGAAATGCTACTCC 59.412 38.462 0.00 0.00 0.00 3.85
3139 10711 6.587608 CCCAAACATGAAAAGAAATGCTACTC 59.412 38.462 0.00 0.00 0.00 2.59
3140 10712 6.041979 ACCCAAACATGAAAAGAAATGCTACT 59.958 34.615 0.00 0.00 0.00 2.57
3141 10713 6.146021 CACCCAAACATGAAAAGAAATGCTAC 59.854 38.462 0.00 0.00 0.00 3.58
3362 10935 0.516001 TGGAGAAGACGTCGAACTCG 59.484 55.000 22.61 0.00 41.45 4.18
3531 11186 7.391148 AAATGCGTCCATAGATAAAACACTT 57.609 32.000 0.00 0.00 0.00 3.16
3585 11240 3.811497 TCTGAACTAAGAACTCGACGACA 59.189 43.478 0.00 0.00 0.00 4.35
3650 11308 9.553064 ACAAAACTTCACAATGCCAAAATTATA 57.447 25.926 0.00 0.00 0.00 0.98
3792 11495 3.141002 GCAAGTGGCACATTATCACAG 57.859 47.619 21.41 0.00 44.52 3.66
3872 12005 6.875926 GCAAGAAATTGCTACACCTAATTG 57.124 37.500 5.74 0.00 44.15 2.32
3955 12353 4.629200 GCTACAACTCAATCCTCAGAACAG 59.371 45.833 0.00 0.00 0.00 3.16
4078 15240 4.501071 TGAGTTCGCTGGTAATTTCTACC 58.499 43.478 0.00 0.00 38.07 3.18
4136 15354 1.954528 CTGCAGTTTGCTGGACCTG 59.045 57.895 5.25 0.00 45.31 4.00
4177 15436 5.881923 TCAGTTGTTCTGGGTAACTACTT 57.118 39.130 0.00 0.00 41.43 2.24
4178 15437 5.365895 AGTTCAGTTGTTCTGGGTAACTACT 59.634 40.000 0.00 0.00 43.22 2.57
4179 15438 5.608449 AGTTCAGTTGTTCTGGGTAACTAC 58.392 41.667 0.00 0.00 43.76 2.73
4180 15439 5.881923 AGTTCAGTTGTTCTGGGTAACTA 57.118 39.130 0.00 0.00 43.76 2.24
4181 15440 4.772886 AGTTCAGTTGTTCTGGGTAACT 57.227 40.909 0.00 0.00 43.76 2.24
4182 15441 5.362263 TGTAGTTCAGTTGTTCTGGGTAAC 58.638 41.667 0.00 0.00 43.76 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.