Multiple sequence alignment - TraesCS5D01G445900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G445900 chr5D 100.000 3559 0 0 1 3559 496320692 496324250 0.000000e+00 6573.0
1 TraesCS5D01G445900 chr5D 77.895 475 56 26 776 1240 496272045 496272480 2.120000e-62 250.0
2 TraesCS5D01G445900 chr5B 88.130 2064 142 49 720 2739 614367321 614369325 0.000000e+00 2359.0
3 TraesCS5D01G445900 chr5B 84.179 335 37 12 2926 3252 614369594 614369920 9.590000e-81 311.0
4 TraesCS5D01G445900 chr5B 96.667 90 3 0 2781 2870 614369497 614369586 2.210000e-32 150.0
5 TraesCS5D01G445900 chr5B 78.661 239 25 8 880 1116 614062948 614063162 6.200000e-28 135.0
6 TraesCS5D01G445900 chr5B 97.826 46 1 0 2738 2783 614369348 614369393 2.950000e-11 80.5
7 TraesCS5D01G445900 chr5B 90.566 53 3 2 653 704 614367235 614367286 6.380000e-08 69.4
8 TraesCS5D01G445900 chr5A 87.485 1686 107 49 50 1658 620174435 620176093 0.000000e+00 1849.0
9 TraesCS5D01G445900 chr5A 89.431 984 57 21 1761 2737 620178169 620179112 0.000000e+00 1197.0
10 TraesCS5D01G445900 chr5A 86.095 338 27 10 2887 3208 620184839 620185172 2.630000e-91 346.0
11 TraesCS5D01G445900 chr5A 84.401 359 36 8 884 1240 620150763 620151103 5.690000e-88 335.0
12 TraesCS5D01G445900 chrUn 100.000 29 0 0 969 997 99637337 99637365 2.000000e-03 54.7
13 TraesCS5D01G445900 chr4B 100.000 28 0 0 969 996 655759839 655759866 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G445900 chr5D 496320692 496324250 3558 False 6573.00 6573 100.0000 1 3559 1 chr5D.!!$F2 3558
1 TraesCS5D01G445900 chr5B 614367235 614369920 2685 False 593.98 2359 91.4736 653 3252 5 chr5B.!!$F2 2599
2 TraesCS5D01G445900 chr5A 620174435 620179112 4677 False 1523.00 1849 88.4580 50 2737 2 chr5A.!!$F3 2687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.179045 CATAGGTTTCCTCGCCCCAG 60.179 60.0 0.00 0.0 34.61 4.45 F
854 933 0.527600 CGCCGCAGTATAAGACAGCA 60.528 55.0 0.00 0.0 40.48 4.41 F
1672 1824 1.009829 ATTTTGCTGTCGCGATCCTC 58.990 50.0 14.06 0.0 39.65 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1905 4015 0.319083 TGTCCGGACATACTTTGCGT 59.681 50.0 33.23 0.0 36.21 5.24 R
2250 4376 0.527565 CTTTGGGGAATGGTGCGAAG 59.472 55.0 0.00 0.0 0.00 3.79 R
3252 5519 0.032316 ATGCCCTGCTCTCTCTCAGA 60.032 55.0 0.00 0.0 32.26 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.080647 GGGTGCATAGGTTTCCTCG 57.919 57.895 0.00 0.00 34.61 4.63
19 20 1.095807 GGGTGCATAGGTTTCCTCGC 61.096 60.000 0.00 0.00 34.61 5.03
20 21 1.095807 GGTGCATAGGTTTCCTCGCC 61.096 60.000 0.00 0.48 34.61 5.54
21 22 1.095807 GTGCATAGGTTTCCTCGCCC 61.096 60.000 0.00 0.00 34.61 6.13
22 23 1.526225 GCATAGGTTTCCTCGCCCC 60.526 63.158 0.00 0.00 34.61 5.80
23 24 1.912220 CATAGGTTTCCTCGCCCCA 59.088 57.895 0.00 0.00 34.61 4.96
24 25 0.179045 CATAGGTTTCCTCGCCCCAG 60.179 60.000 0.00 0.00 34.61 4.45
25 26 1.984288 ATAGGTTTCCTCGCCCCAGC 61.984 60.000 0.00 0.00 34.61 4.85
43 44 3.261677 CCCCCACCCCCTTCGAAA 61.262 66.667 0.00 0.00 0.00 3.46
44 45 2.622447 CCCCCACCCCCTTCGAAAT 61.622 63.158 0.00 0.00 0.00 2.17
45 46 1.379843 CCCCACCCCCTTCGAAATG 60.380 63.158 0.00 0.00 0.00 2.32
46 47 1.379843 CCCACCCCCTTCGAAATGG 60.380 63.158 0.00 2.68 0.00 3.16
47 48 1.379843 CCACCCCCTTCGAAATGGG 60.380 63.158 23.61 23.61 44.03 4.00
48 49 2.052104 CACCCCCTTCGAAATGGGC 61.052 63.158 24.66 0.00 42.07 5.36
148 150 8.495148 GTTGACAACATTCAAAAACTTTGTTCT 58.505 29.630 13.52 0.00 37.24 3.01
192 194 8.681806 TCTTGTGTTTCAAAGAAATGTATGTGA 58.318 29.630 0.00 0.00 35.48 3.58
195 197 8.246871 TGTGTTTCAAAGAAATGTATGTGACAA 58.753 29.630 0.00 0.00 42.78 3.18
258 262 9.914834 TGCAGTTAAAAATAGGATAGTACCATT 57.085 29.630 0.00 0.00 0.00 3.16
372 379 9.932207 ATTCTTTATCATTCAAAGCAATGTTCA 57.068 25.926 0.00 0.00 35.56 3.18
386 393 4.610905 GCAATGTTCAATGCGCATTTGAAA 60.611 37.500 32.13 22.20 31.31 2.69
636 693 9.113876 CAGTATTTAGAAAACAAAACACCGATC 57.886 33.333 0.00 0.00 0.00 3.69
714 772 4.501743 GGCTATTAGGCGAAAAGTAGCTCT 60.502 45.833 10.05 0.00 35.93 4.09
788 867 3.499737 CATTCCCGCGCACTCACC 61.500 66.667 8.75 0.00 0.00 4.02
804 883 3.537874 CCCTCGACCGACCCATCC 61.538 72.222 0.00 0.00 0.00 3.51
805 884 2.442272 CCTCGACCGACCCATCCT 60.442 66.667 0.00 0.00 0.00 3.24
852 931 1.215655 GCCGCCGCAGTATAAGACAG 61.216 60.000 0.00 0.00 34.03 3.51
854 933 0.527600 CGCCGCAGTATAAGACAGCA 60.528 55.000 0.00 0.00 40.48 4.41
886 976 2.726691 GGACACAACACCGATCGCG 61.727 63.158 10.32 0.00 37.24 5.87
906 996 2.060004 CTAGAAGGATCGCGACCGCA 62.060 60.000 12.93 2.69 42.06 5.69
1020 1117 3.470567 CTCGCGGTGTTCGACAGC 61.471 66.667 6.13 7.00 42.72 4.40
1194 1291 3.732849 CCCTTCCTCCCCAGGTGC 61.733 72.222 0.00 0.00 41.28 5.01
1227 1324 1.467342 CTCCGTTGATTTCGTTTCCCC 59.533 52.381 0.00 0.00 0.00 4.81
1301 1429 5.972935 TCTCGCACAAATATTGTTCCTCTA 58.027 37.500 0.00 0.00 43.23 2.43
1387 1525 6.312918 TCTTCTACTGAATCATTTACGTTGGC 59.687 38.462 0.00 0.00 0.00 4.52
1429 1567 3.935203 ACGACATATTCTGCTTGTTCCAG 59.065 43.478 0.00 0.00 0.00 3.86
1482 1620 1.334689 GCAGTACGGGTTGAGCAAAAC 60.335 52.381 0.00 0.00 0.00 2.43
1564 1702 1.527433 CTGCAGACCAGGTCGTGAGA 61.527 60.000 14.32 3.30 37.67 3.27
1594 1732 1.664588 GGCAAATTCGCGTTTGTGCTA 60.665 47.619 19.43 0.00 40.38 3.49
1672 1824 1.009829 ATTTTGCTGTCGCGATCCTC 58.990 50.000 14.06 0.00 39.65 3.71
1695 1928 2.579207 ACGCAGTTATCGCAGTACAT 57.421 45.000 0.00 0.00 37.78 2.29
1706 1939 2.810852 TCGCAGTACATTGCATGTTTCA 59.189 40.909 7.74 0.00 44.28 2.69
1707 1940 3.120234 TCGCAGTACATTGCATGTTTCAG 60.120 43.478 7.74 1.80 44.28 3.02
1708 1941 3.365264 CGCAGTACATTGCATGTTTCAGT 60.365 43.478 7.74 0.00 44.28 3.41
1722 1955 7.010367 TGCATGTTTCAGTTTGAAGATTTTGAC 59.990 33.333 0.00 0.00 37.70 3.18
1855 3964 7.547370 CAGTTTGGTCCAAATTTTTACTGAACA 59.453 33.333 19.89 0.00 35.74 3.18
1875 3985 4.532834 ACATTGGGGCTCGTTTATACAAT 58.467 39.130 0.00 0.00 0.00 2.71
1898 4008 9.433153 CAATATATTCAGCATGTGACATCTAGT 57.567 33.333 0.00 0.00 37.40 2.57
1903 4013 4.949856 TCAGCATGTGACATCTAGTACTCA 59.050 41.667 0.00 0.00 37.40 3.41
1904 4014 5.418840 TCAGCATGTGACATCTAGTACTCAA 59.581 40.000 0.00 0.00 37.40 3.02
1905 4015 6.071391 TCAGCATGTGACATCTAGTACTCAAA 60.071 38.462 0.00 0.00 37.40 2.69
1906 4016 6.035435 CAGCATGTGACATCTAGTACTCAAAC 59.965 42.308 0.00 0.00 0.00 2.93
1907 4017 5.004821 GCATGTGACATCTAGTACTCAAACG 59.995 44.000 0.00 0.00 0.00 3.60
1908 4018 4.482386 TGTGACATCTAGTACTCAAACGC 58.518 43.478 0.00 0.00 0.00 4.84
2006 4117 3.648545 ACTAGATGCTACCAATTCCCTCC 59.351 47.826 0.00 0.00 0.00 4.30
2057 4168 4.143030 CCTGTCTAACGTTCTGCATTTCAG 60.143 45.833 2.82 3.96 44.21 3.02
2058 4169 3.186409 TGTCTAACGTTCTGCATTTCAGC 59.814 43.478 2.82 0.00 42.56 4.26
2059 4170 3.186409 GTCTAACGTTCTGCATTTCAGCA 59.814 43.478 2.82 0.00 42.56 4.41
2060 4171 4.002982 TCTAACGTTCTGCATTTCAGCAT 58.997 39.130 2.82 0.00 44.68 3.79
2061 4172 3.648339 AACGTTCTGCATTTCAGCATT 57.352 38.095 0.00 0.00 44.68 3.56
2062 4173 3.648339 ACGTTCTGCATTTCAGCATTT 57.352 38.095 0.00 0.00 44.68 2.32
2063 4174 3.568538 ACGTTCTGCATTTCAGCATTTC 58.431 40.909 0.00 0.00 44.68 2.17
2098 4209 4.750098 ACAGACGACACAAATTACTCCTTG 59.250 41.667 0.00 0.00 0.00 3.61
2123 4247 9.624697 TGCTTAGTACTGCAAAGAAATTAATTG 57.375 29.630 5.39 0.00 36.15 2.32
2124 4248 9.840427 GCTTAGTACTGCAAAGAAATTAATTGA 57.160 29.630 5.39 0.00 0.00 2.57
2160 4286 5.157940 TCTTCTTATAGGATGCTGATGGC 57.842 43.478 0.00 0.00 42.22 4.40
2192 4318 4.301072 TTTACTGGGGAGTTGATTCAGG 57.699 45.455 0.00 0.00 0.00 3.86
2225 4351 1.154093 TGTCCGACGACGATGAAGC 60.154 57.895 9.28 0.00 42.37 3.86
2238 4364 1.800586 GATGAAGCTGTGAAGAACGCA 59.199 47.619 0.00 0.00 37.45 5.24
2250 4376 3.057596 TGAAGAACGCATGTGGAAAATCC 60.058 43.478 11.65 0.00 36.96 3.01
2272 4398 0.322997 CGCACCATTCCCCAAAGGTA 60.323 55.000 0.00 0.00 36.75 3.08
2276 4402 0.034477 CCATTCCCCAAAGGTACGCT 60.034 55.000 0.00 0.00 36.75 5.07
2279 4405 2.773993 TTCCCCAAAGGTACGCTTAG 57.226 50.000 0.00 0.00 36.75 2.18
2282 4408 2.433239 TCCCCAAAGGTACGCTTAGATC 59.567 50.000 0.00 0.00 36.75 2.75
2302 4429 1.730121 CGCAATCAAGCAAGCAATCGT 60.730 47.619 0.00 0.00 0.00 3.73
2375 4502 4.349365 TGTTTCCCTTGTCAGGTTTCTTT 58.651 39.130 0.00 0.00 38.79 2.52
2384 4511 4.258543 TGTCAGGTTTCTTTTTCACGACT 58.741 39.130 0.00 0.00 0.00 4.18
2571 4698 6.069331 TCCCAGTACTGAATCTGTAGATACC 58.931 44.000 24.68 0.00 33.73 2.73
2578 4705 3.003378 TGAATCTGTAGATACCGTCGCAG 59.997 47.826 0.00 0.00 36.63 5.18
2595 4722 5.449999 CGTCGCAGGCATATGGTATATCTTA 60.450 44.000 4.56 0.00 0.00 2.10
2596 4723 5.980116 GTCGCAGGCATATGGTATATCTTAG 59.020 44.000 4.56 0.00 0.00 2.18
2597 4724 5.891551 TCGCAGGCATATGGTATATCTTAGA 59.108 40.000 4.56 0.00 0.00 2.10
2598 4725 6.379988 TCGCAGGCATATGGTATATCTTAGAA 59.620 38.462 4.56 0.00 0.00 2.10
2599 4726 6.699204 CGCAGGCATATGGTATATCTTAGAAG 59.301 42.308 4.56 0.00 0.00 2.85
2600 4727 7.560368 GCAGGCATATGGTATATCTTAGAAGT 58.440 38.462 4.56 0.00 0.00 3.01
2646 4773 3.222603 GTGGTAATAATTGGGCTCAGGG 58.777 50.000 0.00 0.00 0.00 4.45
2647 4774 2.856231 TGGTAATAATTGGGCTCAGGGT 59.144 45.455 0.00 0.00 0.00 4.34
2648 4775 3.117663 TGGTAATAATTGGGCTCAGGGTC 60.118 47.826 0.00 0.00 0.00 4.46
2649 4776 3.117663 GGTAATAATTGGGCTCAGGGTCA 60.118 47.826 0.00 0.00 0.00 4.02
2653 4780 2.788230 ATTGGGCTCAGGGTCAGGGA 62.788 60.000 0.00 0.00 0.00 4.20
2685 4815 1.577468 TGTGCAACGTTCACCTACAG 58.423 50.000 20.58 1.99 42.39 2.74
2724 4854 6.570692 CCTGTGGTACAAGGTTACATAGTAG 58.429 44.000 0.00 0.00 44.16 2.57
2795 5056 3.372206 CAGAAGCCTTACAATTCCAGACG 59.628 47.826 0.00 0.00 0.00 4.18
2799 5060 1.737793 CCTTACAATTCCAGACGCACC 59.262 52.381 0.00 0.00 0.00 5.01
2838 5099 3.674997 TGAGTGAACCTGAATTAGCACC 58.325 45.455 0.00 0.00 0.00 5.01
2870 5131 0.256177 GTGGATCCCCTGTTTCCTCC 59.744 60.000 9.90 0.00 0.00 4.30
2871 5132 0.178846 TGGATCCCCTGTTTCCTCCA 60.179 55.000 9.90 0.00 0.00 3.86
2872 5133 0.548510 GGATCCCCTGTTTCCTCCAG 59.451 60.000 0.00 0.00 0.00 3.86
2873 5134 1.584724 GATCCCCTGTTTCCTCCAGA 58.415 55.000 0.00 0.00 31.38 3.86
2875 5136 1.064825 TCCCCTGTTTCCTCCAGAAC 58.935 55.000 0.00 0.00 32.95 3.01
2876 5137 0.771127 CCCCTGTTTCCTCCAGAACA 59.229 55.000 0.00 0.00 32.95 3.18
2877 5138 1.144913 CCCCTGTTTCCTCCAGAACAA 59.855 52.381 0.00 0.00 32.95 2.83
2878 5139 2.424234 CCCCTGTTTCCTCCAGAACAAA 60.424 50.000 0.00 0.00 32.95 2.83
2879 5140 3.295973 CCCTGTTTCCTCCAGAACAAAA 58.704 45.455 0.00 0.00 32.95 2.44
2880 5141 3.704061 CCCTGTTTCCTCCAGAACAAAAA 59.296 43.478 0.00 0.00 32.95 1.94
2881 5142 4.344968 CCCTGTTTCCTCCAGAACAAAAAT 59.655 41.667 0.00 0.00 32.95 1.82
2882 5143 5.538433 CCCTGTTTCCTCCAGAACAAAAATA 59.462 40.000 0.00 0.00 32.95 1.40
2883 5144 6.041523 CCCTGTTTCCTCCAGAACAAAAATAA 59.958 38.462 0.00 0.00 32.95 1.40
2884 5145 7.256296 CCCTGTTTCCTCCAGAACAAAAATAAT 60.256 37.037 0.00 0.00 32.95 1.28
2885 5146 8.150296 CCTGTTTCCTCCAGAACAAAAATAATT 58.850 33.333 0.00 0.00 32.95 1.40
2886 5147 9.546428 CTGTTTCCTCCAGAACAAAAATAATTT 57.454 29.630 0.00 0.00 32.95 1.82
2892 5153 9.369904 CCTCCAGAACAAAAATAATTTACATGG 57.630 33.333 0.00 0.00 0.00 3.66
2907 5168 8.744568 AATTTACATGGAGAGGAAGAATTCTC 57.255 34.615 8.78 2.54 46.56 2.87
2913 5174 4.084011 GAGAGGAAGAATTCTCCCATGG 57.916 50.000 13.86 4.14 46.56 3.66
2914 5175 3.713764 GAGAGGAAGAATTCTCCCATGGA 59.286 47.826 13.86 0.00 46.56 3.41
2915 5176 3.457749 AGAGGAAGAATTCTCCCATGGAC 59.542 47.826 13.86 0.00 46.56 4.02
2916 5177 2.511637 AGGAAGAATTCTCCCATGGACC 59.488 50.000 13.86 5.43 46.56 4.46
2917 5178 2.511637 GGAAGAATTCTCCCATGGACCT 59.488 50.000 15.22 0.00 46.56 3.85
2918 5179 3.716872 GGAAGAATTCTCCCATGGACCTA 59.283 47.826 15.22 0.00 46.56 3.08
2919 5180 4.202409 GGAAGAATTCTCCCATGGACCTAG 60.202 50.000 15.22 5.18 46.56 3.02
2920 5181 2.708325 AGAATTCTCCCATGGACCTAGC 59.292 50.000 15.22 0.00 0.00 3.42
2921 5182 2.503869 ATTCTCCCATGGACCTAGCT 57.496 50.000 15.22 0.00 0.00 3.32
2922 5183 1.500474 TTCTCCCATGGACCTAGCTG 58.500 55.000 15.22 0.00 0.00 4.24
2923 5184 0.339859 TCTCCCATGGACCTAGCTGT 59.660 55.000 15.22 0.00 0.00 4.40
2924 5185 1.573857 TCTCCCATGGACCTAGCTGTA 59.426 52.381 15.22 0.00 0.00 2.74
2945 5206 1.133976 GCAGACAGGGGCATAATGACT 60.134 52.381 0.00 0.00 0.00 3.41
2947 5208 2.437281 CAGACAGGGGCATAATGACTCT 59.563 50.000 0.00 0.00 35.83 3.24
2952 5213 0.950116 GGGCATAATGACTCTGCTGC 59.050 55.000 0.00 0.00 36.18 5.25
2955 5216 1.004185 GCATAATGACTCTGCTGCGTG 60.004 52.381 0.00 0.00 33.15 5.34
2978 5239 5.637810 TGCTGTGCTGAAATAGTGTTACTAC 59.362 40.000 0.00 0.00 32.84 2.73
3002 5263 1.981256 AACGGACTGTCAGGCATTTT 58.019 45.000 8.27 0.00 0.00 1.82
3011 5272 3.689347 TGTCAGGCATTTTGCTGTAGAT 58.311 40.909 0.00 0.00 44.28 1.98
3012 5273 3.441222 TGTCAGGCATTTTGCTGTAGATG 59.559 43.478 0.00 0.00 44.28 2.90
3015 5276 2.945447 GCATTTTGCTGTAGATGCCA 57.055 45.000 5.34 0.00 40.96 4.92
3019 5280 4.202040 GCATTTTGCTGTAGATGCCACATA 60.202 41.667 5.34 0.00 40.96 2.29
3027 5288 5.760253 GCTGTAGATGCCACATAAGTACATT 59.240 40.000 0.00 0.00 0.00 2.71
3041 5302 3.189606 AGTACATTCCCCCTTGATGTCA 58.810 45.455 0.00 0.00 0.00 3.58
3051 5312 4.716287 CCCCCTTGATGTCACCAATAATTT 59.284 41.667 0.00 0.00 0.00 1.82
3060 5321 5.527951 TGTCACCAATAATTTGCACAAGTC 58.472 37.500 0.00 0.00 0.00 3.01
3063 5326 4.386652 CACCAATAATTTGCACAAGTCTGC 59.613 41.667 0.00 0.00 37.70 4.26
3090 5353 3.873679 TACGGGTGGCTGGACGAGT 62.874 63.158 0.00 0.00 0.00 4.18
3095 5358 0.741221 GGTGGCTGGACGAGTGAATC 60.741 60.000 0.00 0.00 0.00 2.52
3096 5359 0.741221 GTGGCTGGACGAGTGAATCC 60.741 60.000 0.00 0.00 35.37 3.01
3097 5360 1.153349 GGCTGGACGAGTGAATCCC 60.153 63.158 0.00 0.00 33.69 3.85
3098 5361 1.596934 GCTGGACGAGTGAATCCCA 59.403 57.895 0.00 0.00 33.69 4.37
3099 5362 0.179000 GCTGGACGAGTGAATCCCAT 59.821 55.000 0.00 0.00 33.69 4.00
3100 5363 1.945387 CTGGACGAGTGAATCCCATG 58.055 55.000 0.00 0.00 33.69 3.66
3101 5364 0.541392 TGGACGAGTGAATCCCATGG 59.459 55.000 4.14 4.14 33.69 3.66
3103 5366 1.656652 GACGAGTGAATCCCATGGTG 58.343 55.000 11.73 2.15 0.00 4.17
3105 5368 0.392863 CGAGTGAATCCCATGGTGCA 60.393 55.000 11.73 0.00 0.00 4.57
3106 5369 1.386533 GAGTGAATCCCATGGTGCAG 58.613 55.000 11.73 0.00 0.00 4.41
3107 5370 0.033796 AGTGAATCCCATGGTGCAGG 60.034 55.000 11.73 0.00 0.00 4.85
3108 5371 0.323725 GTGAATCCCATGGTGCAGGT 60.324 55.000 11.73 0.00 0.00 4.00
3110 5373 1.669999 GAATCCCATGGTGCAGGTGC 61.670 60.000 11.73 0.00 42.50 5.01
3121 5384 2.034687 CAGGTGCAGGTTCAGGGG 59.965 66.667 0.00 0.00 0.00 4.79
3123 5386 2.034221 GGTGCAGGTTCAGGGGAC 59.966 66.667 0.00 0.00 0.00 4.46
3124 5387 2.358737 GTGCAGGTTCAGGGGACG 60.359 66.667 0.00 0.00 0.00 4.79
3125 5388 2.847234 TGCAGGTTCAGGGGACGT 60.847 61.111 0.00 0.00 0.00 4.34
3126 5389 2.358737 GCAGGTTCAGGGGACGTG 60.359 66.667 0.00 0.00 46.70 4.49
3130 5393 0.763223 AGGTTCAGGGGACGTGTCTT 60.763 55.000 0.00 0.00 45.38 3.01
3147 5410 4.058124 TGTCTTGCTGTAGCTTACTGTTG 58.942 43.478 5.38 0.00 42.66 3.33
3156 5419 1.019805 GCTTACTGTTGTCTCCGGCC 61.020 60.000 0.00 0.00 0.00 6.13
3167 5430 3.883744 CTCCGGCCGAAGCACAGTT 62.884 63.158 30.73 0.00 42.56 3.16
3168 5431 3.726517 CCGGCCGAAGCACAGTTG 61.727 66.667 30.73 0.44 42.56 3.16
3169 5432 2.664851 CGGCCGAAGCACAGTTGA 60.665 61.111 24.07 0.00 42.56 3.18
3171 5434 1.598130 GGCCGAAGCACAGTTGAGT 60.598 57.895 0.00 0.00 42.56 3.41
3172 5435 0.320421 GGCCGAAGCACAGTTGAGTA 60.320 55.000 0.00 0.00 42.56 2.59
3176 5439 2.353704 CCGAAGCACAGTTGAGTATGGA 60.354 50.000 0.00 0.00 0.00 3.41
3180 5447 2.497675 AGCACAGTTGAGTATGGACGAT 59.502 45.455 0.00 0.00 0.00 3.73
3213 5480 5.006746 CGTATAATTGGAGGAACTGAACAGC 59.993 44.000 1.46 0.00 41.55 4.40
3217 5484 1.149148 GGAGGAACTGAACAGCGAAC 58.851 55.000 1.46 0.00 41.55 3.95
3248 5515 4.688511 GTGGTTTGACACAACAGTAACA 57.311 40.909 0.00 0.00 40.99 2.41
3252 5519 5.650266 TGGTTTGACACAACAGTAACAAGAT 59.350 36.000 0.00 0.00 0.00 2.40
3253 5520 6.183360 TGGTTTGACACAACAGTAACAAGATC 60.183 38.462 0.00 0.00 0.00 2.75
3254 5521 6.038271 GGTTTGACACAACAGTAACAAGATCT 59.962 38.462 0.00 0.00 0.00 2.75
3255 5522 6.603237 TTGACACAACAGTAACAAGATCTG 57.397 37.500 0.00 0.00 35.60 2.90
3256 5523 5.912892 TGACACAACAGTAACAAGATCTGA 58.087 37.500 0.00 0.00 33.93 3.27
3257 5524 5.985530 TGACACAACAGTAACAAGATCTGAG 59.014 40.000 0.00 0.00 33.93 3.35
3258 5525 6.161855 ACACAACAGTAACAAGATCTGAGA 57.838 37.500 0.00 0.00 33.93 3.27
3259 5526 6.219473 ACACAACAGTAACAAGATCTGAGAG 58.781 40.000 0.00 0.00 33.93 3.20
3260 5527 6.040955 ACACAACAGTAACAAGATCTGAGAGA 59.959 38.462 0.00 0.00 33.93 3.10
3261 5528 6.585702 CACAACAGTAACAAGATCTGAGAGAG 59.414 42.308 0.00 0.00 33.93 3.20
3262 5529 6.491745 ACAACAGTAACAAGATCTGAGAGAGA 59.508 38.462 0.00 0.00 33.93 3.10
3263 5530 6.757897 ACAGTAACAAGATCTGAGAGAGAG 57.242 41.667 0.00 0.00 32.80 3.20
3264 5531 5.125417 ACAGTAACAAGATCTGAGAGAGAGC 59.875 44.000 0.00 0.00 37.37 4.09
3265 5532 5.125257 CAGTAACAAGATCTGAGAGAGAGCA 59.875 44.000 0.00 0.00 39.79 4.26
3266 5533 4.724074 AACAAGATCTGAGAGAGAGCAG 57.276 45.455 0.00 0.00 39.79 4.24
3267 5534 3.025978 ACAAGATCTGAGAGAGAGCAGG 58.974 50.000 0.00 0.00 39.79 4.85
3268 5535 2.363038 CAAGATCTGAGAGAGAGCAGGG 59.637 54.545 0.00 0.00 39.79 4.45
3269 5536 0.675633 GATCTGAGAGAGAGCAGGGC 59.324 60.000 0.00 0.00 37.05 5.19
3270 5537 0.032316 ATCTGAGAGAGAGCAGGGCA 60.032 55.000 0.00 0.00 32.80 5.36
3271 5538 0.032316 TCTGAGAGAGAGCAGGGCAT 60.032 55.000 0.00 0.00 33.05 4.40
3272 5539 0.831966 CTGAGAGAGAGCAGGGCATT 59.168 55.000 0.00 0.00 0.00 3.56
3273 5540 1.209990 CTGAGAGAGAGCAGGGCATTT 59.790 52.381 0.00 0.00 0.00 2.32
3274 5541 1.209019 TGAGAGAGAGCAGGGCATTTC 59.791 52.381 0.00 0.00 0.00 2.17
3275 5542 0.177604 AGAGAGAGCAGGGCATTTCG 59.822 55.000 0.00 0.00 0.00 3.46
3276 5543 0.107945 GAGAGAGCAGGGCATTTCGT 60.108 55.000 0.00 0.00 0.00 3.85
3277 5544 1.137086 GAGAGAGCAGGGCATTTCGTA 59.863 52.381 0.00 0.00 0.00 3.43
3278 5545 1.137872 AGAGAGCAGGGCATTTCGTAG 59.862 52.381 0.00 0.00 0.00 3.51
3279 5546 1.137086 GAGAGCAGGGCATTTCGTAGA 59.863 52.381 0.00 0.00 0.00 2.59
3280 5547 1.137872 AGAGCAGGGCATTTCGTAGAG 59.862 52.381 0.00 0.00 38.43 2.43
3281 5548 0.905357 AGCAGGGCATTTCGTAGAGT 59.095 50.000 0.00 0.00 38.43 3.24
3282 5549 2.100916 GAGCAGGGCATTTCGTAGAGTA 59.899 50.000 0.00 0.00 38.43 2.59
3283 5550 2.700897 AGCAGGGCATTTCGTAGAGTAT 59.299 45.455 0.00 0.00 38.43 2.12
3284 5551 3.895656 AGCAGGGCATTTCGTAGAGTATA 59.104 43.478 0.00 0.00 38.43 1.47
3285 5552 4.344102 AGCAGGGCATTTCGTAGAGTATAA 59.656 41.667 0.00 0.00 38.43 0.98
3286 5553 5.012148 AGCAGGGCATTTCGTAGAGTATAAT 59.988 40.000 0.00 0.00 38.43 1.28
3287 5554 6.210784 AGCAGGGCATTTCGTAGAGTATAATA 59.789 38.462 0.00 0.00 38.43 0.98
3288 5555 6.872020 GCAGGGCATTTCGTAGAGTATAATAA 59.128 38.462 0.00 0.00 38.43 1.40
3289 5556 7.386848 GCAGGGCATTTCGTAGAGTATAATAAA 59.613 37.037 0.00 0.00 38.43 1.40
3290 5557 8.709646 CAGGGCATTTCGTAGAGTATAATAAAC 58.290 37.037 0.00 0.00 38.43 2.01
3291 5558 8.426489 AGGGCATTTCGTAGAGTATAATAAACA 58.574 33.333 0.00 0.00 38.43 2.83
3292 5559 9.216117 GGGCATTTCGTAGAGTATAATAAACAT 57.784 33.333 0.00 0.00 38.43 2.71
3300 5567 9.613957 CGTAGAGTATAATAAACATGTCTCTGG 57.386 37.037 15.85 7.25 33.85 3.86
3301 5568 9.413048 GTAGAGTATAATAAACATGTCTCTGGC 57.587 37.037 15.85 7.95 33.85 4.85
3302 5569 8.256356 AGAGTATAATAAACATGTCTCTGGCT 57.744 34.615 0.00 0.00 31.22 4.75
3303 5570 8.364142 AGAGTATAATAAACATGTCTCTGGCTC 58.636 37.037 0.00 1.37 31.22 4.70
3304 5571 8.256356 AGTATAATAAACATGTCTCTGGCTCT 57.744 34.615 0.00 0.00 0.00 4.09
3305 5572 8.147058 AGTATAATAAACATGTCTCTGGCTCTG 58.853 37.037 0.00 0.00 0.00 3.35
3306 5573 5.426689 AATAAACATGTCTCTGGCTCTGA 57.573 39.130 0.00 0.00 0.00 3.27
3307 5574 3.777106 AAACATGTCTCTGGCTCTGAA 57.223 42.857 0.00 0.00 0.00 3.02
3308 5575 3.996921 AACATGTCTCTGGCTCTGAAT 57.003 42.857 0.00 0.00 0.00 2.57
3309 5576 3.996921 ACATGTCTCTGGCTCTGAATT 57.003 42.857 0.00 0.00 0.00 2.17
3310 5577 3.871485 ACATGTCTCTGGCTCTGAATTC 58.129 45.455 0.00 0.00 0.00 2.17
3311 5578 3.518705 ACATGTCTCTGGCTCTGAATTCT 59.481 43.478 7.05 0.00 0.00 2.40
3312 5579 3.883830 TGTCTCTGGCTCTGAATTCTC 57.116 47.619 7.05 0.00 0.00 2.87
3313 5580 2.165234 TGTCTCTGGCTCTGAATTCTCG 59.835 50.000 7.05 0.00 0.00 4.04
3314 5581 2.165437 GTCTCTGGCTCTGAATTCTCGT 59.835 50.000 7.05 0.00 0.00 4.18
3315 5582 2.828520 TCTCTGGCTCTGAATTCTCGTT 59.171 45.455 7.05 0.00 0.00 3.85
3316 5583 3.259374 TCTCTGGCTCTGAATTCTCGTTT 59.741 43.478 7.05 0.00 0.00 3.60
3317 5584 3.999663 CTCTGGCTCTGAATTCTCGTTTT 59.000 43.478 7.05 0.00 0.00 2.43
3318 5585 4.389374 TCTGGCTCTGAATTCTCGTTTTT 58.611 39.130 7.05 0.00 0.00 1.94
3319 5586 4.214119 TCTGGCTCTGAATTCTCGTTTTTG 59.786 41.667 7.05 0.00 0.00 2.44
3320 5587 3.882888 TGGCTCTGAATTCTCGTTTTTGT 59.117 39.130 7.05 0.00 0.00 2.83
3321 5588 4.338118 TGGCTCTGAATTCTCGTTTTTGTT 59.662 37.500 7.05 0.00 0.00 2.83
3322 5589 4.912187 GGCTCTGAATTCTCGTTTTTGTTC 59.088 41.667 7.05 0.00 0.00 3.18
3323 5590 4.912187 GCTCTGAATTCTCGTTTTTGTTCC 59.088 41.667 7.05 0.00 0.00 3.62
3324 5591 5.278022 GCTCTGAATTCTCGTTTTTGTTCCT 60.278 40.000 7.05 0.00 0.00 3.36
3325 5592 6.073222 GCTCTGAATTCTCGTTTTTGTTCCTA 60.073 38.462 7.05 0.00 0.00 2.94
3326 5593 7.421530 TCTGAATTCTCGTTTTTGTTCCTAG 57.578 36.000 7.05 0.00 0.00 3.02
3327 5594 6.990349 TCTGAATTCTCGTTTTTGTTCCTAGT 59.010 34.615 7.05 0.00 0.00 2.57
3328 5595 6.954944 TGAATTCTCGTTTTTGTTCCTAGTG 58.045 36.000 7.05 0.00 0.00 2.74
3329 5596 4.806342 TTCTCGTTTTTGTTCCTAGTGC 57.194 40.909 0.00 0.00 0.00 4.40
3330 5597 4.067972 TCTCGTTTTTGTTCCTAGTGCT 57.932 40.909 0.00 0.00 0.00 4.40
3331 5598 3.807622 TCTCGTTTTTGTTCCTAGTGCTG 59.192 43.478 0.00 0.00 0.00 4.41
3332 5599 3.537580 TCGTTTTTGTTCCTAGTGCTGT 58.462 40.909 0.00 0.00 0.00 4.40
3333 5600 4.695396 TCGTTTTTGTTCCTAGTGCTGTA 58.305 39.130 0.00 0.00 0.00 2.74
3334 5601 5.117584 TCGTTTTTGTTCCTAGTGCTGTAA 58.882 37.500 0.00 0.00 0.00 2.41
3335 5602 5.761234 TCGTTTTTGTTCCTAGTGCTGTAAT 59.239 36.000 0.00 0.00 0.00 1.89
3336 5603 6.261381 TCGTTTTTGTTCCTAGTGCTGTAATT 59.739 34.615 0.00 0.00 0.00 1.40
3337 5604 6.577427 CGTTTTTGTTCCTAGTGCTGTAATTC 59.423 38.462 0.00 0.00 0.00 2.17
3338 5605 7.422399 GTTTTTGTTCCTAGTGCTGTAATTCA 58.578 34.615 0.00 0.00 0.00 2.57
3339 5606 7.575414 TTTTGTTCCTAGTGCTGTAATTCAA 57.425 32.000 0.00 0.00 0.00 2.69
3340 5607 7.575414 TTTGTTCCTAGTGCTGTAATTCAAA 57.425 32.000 0.00 0.00 0.00 2.69
3341 5608 7.575414 TTGTTCCTAGTGCTGTAATTCAAAA 57.425 32.000 0.00 0.00 0.00 2.44
3342 5609 7.202016 TGTTCCTAGTGCTGTAATTCAAAAG 57.798 36.000 0.00 0.00 0.00 2.27
3343 5610 6.995686 TGTTCCTAGTGCTGTAATTCAAAAGA 59.004 34.615 0.00 0.00 0.00 2.52
3344 5611 7.500892 TGTTCCTAGTGCTGTAATTCAAAAGAA 59.499 33.333 0.00 0.00 0.00 2.52
3345 5612 7.435068 TCCTAGTGCTGTAATTCAAAAGAAC 57.565 36.000 0.00 0.00 0.00 3.01
3346 5613 6.430000 TCCTAGTGCTGTAATTCAAAAGAACC 59.570 38.462 0.00 0.00 0.00 3.62
3347 5614 6.206634 CCTAGTGCTGTAATTCAAAAGAACCA 59.793 38.462 0.00 0.00 0.00 3.67
3348 5615 6.076981 AGTGCTGTAATTCAAAAGAACCAG 57.923 37.500 0.00 0.00 0.00 4.00
3349 5616 5.594317 AGTGCTGTAATTCAAAAGAACCAGT 59.406 36.000 0.00 0.00 0.00 4.00
3350 5617 6.096846 AGTGCTGTAATTCAAAAGAACCAGTT 59.903 34.615 0.00 0.00 0.00 3.16
3351 5618 6.756542 GTGCTGTAATTCAAAAGAACCAGTTT 59.243 34.615 0.00 0.00 0.00 2.66
3352 5619 7.918562 GTGCTGTAATTCAAAAGAACCAGTTTA 59.081 33.333 0.00 0.00 0.00 2.01
3353 5620 8.470805 TGCTGTAATTCAAAAGAACCAGTTTAA 58.529 29.630 0.00 0.00 0.00 1.52
3354 5621 9.476202 GCTGTAATTCAAAAGAACCAGTTTAAT 57.524 29.630 0.00 0.00 0.00 1.40
3360 5627 8.865590 TTCAAAAGAACCAGTTTAATTACAGC 57.134 30.769 0.00 0.00 0.00 4.40
3361 5628 7.136119 TCAAAAGAACCAGTTTAATTACAGCG 58.864 34.615 0.00 0.00 0.00 5.18
3362 5629 6.870971 AAAGAACCAGTTTAATTACAGCGA 57.129 33.333 0.00 0.00 0.00 4.93
3363 5630 7.448748 AAAGAACCAGTTTAATTACAGCGAT 57.551 32.000 0.00 0.00 0.00 4.58
3364 5631 6.663944 AGAACCAGTTTAATTACAGCGATC 57.336 37.500 0.00 0.00 0.00 3.69
3365 5632 6.170506 AGAACCAGTTTAATTACAGCGATCA 58.829 36.000 0.00 0.00 0.00 2.92
3366 5633 6.653320 AGAACCAGTTTAATTACAGCGATCAA 59.347 34.615 0.00 0.00 0.00 2.57
3367 5634 6.811253 ACCAGTTTAATTACAGCGATCAAA 57.189 33.333 0.00 0.00 0.00 2.69
3368 5635 6.608610 ACCAGTTTAATTACAGCGATCAAAC 58.391 36.000 0.00 0.00 0.00 2.93
3369 5636 6.205853 ACCAGTTTAATTACAGCGATCAAACA 59.794 34.615 0.00 0.00 0.00 2.83
3370 5637 7.094377 ACCAGTTTAATTACAGCGATCAAACAT 60.094 33.333 0.00 0.00 0.00 2.71
3371 5638 7.754924 CCAGTTTAATTACAGCGATCAAACATT 59.245 33.333 0.00 0.00 0.00 2.71
3372 5639 8.577939 CAGTTTAATTACAGCGATCAAACATTG 58.422 33.333 0.00 0.00 0.00 2.82
3373 5640 7.273381 AGTTTAATTACAGCGATCAAACATTGC 59.727 33.333 0.00 0.00 0.00 3.56
3374 5641 4.970662 ATTACAGCGATCAAACATTGCT 57.029 36.364 0.00 0.00 39.23 3.91
3377 5644 2.907910 AGCGATCAAACATTGCTGAC 57.092 45.000 0.00 0.00 37.38 3.51
3378 5645 2.153645 AGCGATCAAACATTGCTGACA 58.846 42.857 0.00 0.00 37.38 3.58
3379 5646 2.095567 AGCGATCAAACATTGCTGACAC 60.096 45.455 0.00 0.00 37.38 3.67
3380 5647 2.095567 GCGATCAAACATTGCTGACACT 60.096 45.455 0.00 0.00 0.00 3.55
3381 5648 3.610114 GCGATCAAACATTGCTGACACTT 60.610 43.478 0.00 0.00 0.00 3.16
3382 5649 3.910170 CGATCAAACATTGCTGACACTTG 59.090 43.478 0.00 0.00 0.00 3.16
3383 5650 4.319694 CGATCAAACATTGCTGACACTTGA 60.320 41.667 0.00 0.00 0.00 3.02
3384 5651 4.556942 TCAAACATTGCTGACACTTGAG 57.443 40.909 0.00 0.00 0.00 3.02
3385 5652 4.198530 TCAAACATTGCTGACACTTGAGA 58.801 39.130 0.00 0.00 0.00 3.27
3386 5653 4.274214 TCAAACATTGCTGACACTTGAGAG 59.726 41.667 0.00 0.00 0.00 3.20
3387 5654 3.758755 ACATTGCTGACACTTGAGAGA 57.241 42.857 0.00 0.00 0.00 3.10
3388 5655 4.077300 ACATTGCTGACACTTGAGAGAA 57.923 40.909 0.00 0.00 0.00 2.87
3389 5656 4.454678 ACATTGCTGACACTTGAGAGAAA 58.545 39.130 0.00 0.00 0.00 2.52
3390 5657 4.883585 ACATTGCTGACACTTGAGAGAAAA 59.116 37.500 0.00 0.00 0.00 2.29
3391 5658 5.357878 ACATTGCTGACACTTGAGAGAAAAA 59.642 36.000 0.00 0.00 0.00 1.94
3392 5659 5.490139 TTGCTGACACTTGAGAGAAAAAG 57.510 39.130 0.00 0.00 0.00 2.27
3393 5660 3.879295 TGCTGACACTTGAGAGAAAAAGG 59.121 43.478 0.00 0.00 0.00 3.11
3394 5661 3.304324 GCTGACACTTGAGAGAAAAAGGC 60.304 47.826 0.00 0.00 0.00 4.35
3395 5662 3.214328 TGACACTTGAGAGAAAAAGGCC 58.786 45.455 0.00 0.00 0.00 5.19
3396 5663 3.214328 GACACTTGAGAGAAAAAGGCCA 58.786 45.455 5.01 0.00 0.00 5.36
3397 5664 2.952310 ACACTTGAGAGAAAAAGGCCAC 59.048 45.455 5.01 0.00 0.00 5.01
3398 5665 2.294512 CACTTGAGAGAAAAAGGCCACC 59.705 50.000 5.01 0.00 0.00 4.61
3399 5666 1.889170 CTTGAGAGAAAAAGGCCACCC 59.111 52.381 5.01 0.00 0.00 4.61
3400 5667 0.850100 TGAGAGAAAAAGGCCACCCA 59.150 50.000 5.01 0.00 0.00 4.51
3401 5668 1.216678 TGAGAGAAAAAGGCCACCCAA 59.783 47.619 5.01 0.00 0.00 4.12
3402 5669 1.889170 GAGAGAAAAAGGCCACCCAAG 59.111 52.381 5.01 0.00 0.00 3.61
3403 5670 0.969149 GAGAAAAAGGCCACCCAAGG 59.031 55.000 5.01 0.00 0.00 3.61
3404 5671 0.560688 AGAAAAAGGCCACCCAAGGA 59.439 50.000 5.01 0.00 0.00 3.36
3405 5672 1.062505 AGAAAAAGGCCACCCAAGGAA 60.063 47.619 5.01 0.00 0.00 3.36
3406 5673 1.344438 GAAAAAGGCCACCCAAGGAAG 59.656 52.381 5.01 0.00 0.00 3.46
3407 5674 0.471780 AAAAGGCCACCCAAGGAAGG 60.472 55.000 5.01 0.00 0.00 3.46
3408 5675 3.529835 AAGGCCACCCAAGGAAGGC 62.530 63.158 5.01 11.76 42.99 4.35
3410 5677 4.299796 GCCACCCAAGGAAGGCCA 62.300 66.667 5.01 0.00 39.88 5.36
3411 5678 2.772924 CCACCCAAGGAAGGCCAT 59.227 61.111 5.01 0.00 36.29 4.40
3412 5679 1.380380 CCACCCAAGGAAGGCCATC 60.380 63.158 5.01 0.92 36.29 3.51
3413 5680 1.383799 CACCCAAGGAAGGCCATCA 59.616 57.895 10.67 0.00 36.29 3.07
3414 5681 0.967380 CACCCAAGGAAGGCCATCAC 60.967 60.000 10.67 0.00 36.29 3.06
3415 5682 1.750399 CCCAAGGAAGGCCATCACG 60.750 63.158 10.67 0.00 36.29 4.35
3416 5683 2.409870 CCAAGGAAGGCCATCACGC 61.410 63.158 10.67 0.00 36.29 5.34
3423 5690 3.425422 GGCCATCACGCCTTCATC 58.575 61.111 0.00 0.00 46.10 2.92
3424 5691 1.153086 GGCCATCACGCCTTCATCT 60.153 57.895 0.00 0.00 46.10 2.90
3425 5692 1.442526 GGCCATCACGCCTTCATCTG 61.443 60.000 0.00 0.00 46.10 2.90
3426 5693 2.020131 CCATCACGCCTTCATCTGC 58.980 57.895 0.00 0.00 0.00 4.26
3431 5698 3.392431 CGCCTTCATCTGCGTCAG 58.608 61.111 0.00 1.02 45.43 3.51
3432 5699 2.806856 CGCCTTCATCTGCGTCAGC 61.807 63.158 0.00 0.00 45.43 4.26
3433 5700 1.449246 GCCTTCATCTGCGTCAGCT 60.449 57.895 2.45 0.00 45.42 4.24
3434 5701 1.023513 GCCTTCATCTGCGTCAGCTT 61.024 55.000 2.45 0.00 45.42 3.74
3435 5702 0.725686 CCTTCATCTGCGTCAGCTTG 59.274 55.000 2.45 3.63 45.42 4.01
3436 5703 0.725686 CTTCATCTGCGTCAGCTTGG 59.274 55.000 2.45 0.00 45.42 3.61
3437 5704 1.300971 TTCATCTGCGTCAGCTTGGC 61.301 55.000 2.45 0.00 45.42 4.52
3438 5705 2.437359 ATCTGCGTCAGCTTGGCC 60.437 61.111 0.00 0.00 45.42 5.36
3441 5708 4.617520 TGCGTCAGCTTGGCCGAA 62.618 61.111 0.00 0.00 45.42 4.30
3442 5709 4.090057 GCGTCAGCTTGGCCGAAC 62.090 66.667 0.00 0.00 41.01 3.95
3443 5710 2.664851 CGTCAGCTTGGCCGAACA 60.665 61.111 0.00 0.00 0.00 3.18
3444 5711 2.250939 CGTCAGCTTGGCCGAACAA 61.251 57.895 0.00 0.00 0.00 2.83
3445 5712 1.577328 CGTCAGCTTGGCCGAACAAT 61.577 55.000 0.00 0.00 0.00 2.71
3446 5713 1.448985 GTCAGCTTGGCCGAACAATA 58.551 50.000 0.00 0.00 0.00 1.90
3447 5714 2.017049 GTCAGCTTGGCCGAACAATAT 58.983 47.619 0.00 0.00 0.00 1.28
3448 5715 2.032178 GTCAGCTTGGCCGAACAATATC 59.968 50.000 0.00 0.00 0.00 1.63
3449 5716 2.016318 CAGCTTGGCCGAACAATATCA 58.984 47.619 0.00 0.00 0.00 2.15
3450 5717 2.017049 AGCTTGGCCGAACAATATCAC 58.983 47.619 0.00 0.00 0.00 3.06
3451 5718 1.268032 GCTTGGCCGAACAATATCACG 60.268 52.381 0.00 0.00 0.00 4.35
3452 5719 2.006888 CTTGGCCGAACAATATCACGT 58.993 47.619 0.00 0.00 0.00 4.49
3453 5720 2.102070 TGGCCGAACAATATCACGTT 57.898 45.000 0.00 0.00 0.00 3.99
3454 5721 1.735018 TGGCCGAACAATATCACGTTG 59.265 47.619 0.00 0.00 0.00 4.10
3455 5722 1.531058 GGCCGAACAATATCACGTTGC 60.531 52.381 0.00 0.00 0.00 4.17
3456 5723 1.531058 GCCGAACAATATCACGTTGCC 60.531 52.381 0.00 0.00 0.00 4.52
3457 5724 1.735018 CCGAACAATATCACGTTGCCA 59.265 47.619 0.00 0.00 0.00 4.92
3458 5725 2.354510 CCGAACAATATCACGTTGCCAT 59.645 45.455 0.00 0.00 0.00 4.40
3459 5726 3.353524 CGAACAATATCACGTTGCCATG 58.646 45.455 0.00 0.00 0.00 3.66
3460 5727 3.181511 CGAACAATATCACGTTGCCATGT 60.182 43.478 0.00 0.00 0.00 3.21
3461 5728 3.763097 ACAATATCACGTTGCCATGTG 57.237 42.857 3.75 3.75 40.84 3.21
3462 5729 3.081061 ACAATATCACGTTGCCATGTGT 58.919 40.909 9.74 1.30 40.41 3.72
3463 5730 3.126858 ACAATATCACGTTGCCATGTGTC 59.873 43.478 9.74 0.00 40.41 3.67
3464 5731 2.464157 TATCACGTTGCCATGTGTCA 57.536 45.000 9.74 0.00 40.41 3.58
3465 5732 1.603456 ATCACGTTGCCATGTGTCAA 58.397 45.000 9.74 0.00 40.41 3.18
3466 5733 0.660488 TCACGTTGCCATGTGTCAAC 59.340 50.000 9.74 10.77 40.41 3.18
3470 5737 2.247311 GTTGCCATGTGTCAACGATC 57.753 50.000 0.00 0.00 34.12 3.69
3471 5738 0.795698 TTGCCATGTGTCAACGATCG 59.204 50.000 14.88 14.88 0.00 3.69
3472 5739 1.018752 TGCCATGTGTCAACGATCGG 61.019 55.000 20.98 2.12 0.00 4.18
3473 5740 1.019278 GCCATGTGTCAACGATCGGT 61.019 55.000 20.98 10.86 0.00 4.69
3474 5741 1.737696 GCCATGTGTCAACGATCGGTA 60.738 52.381 20.98 0.00 0.00 4.02
3475 5742 2.821546 CCATGTGTCAACGATCGGTAT 58.178 47.619 20.98 0.00 0.00 2.73
3476 5743 3.797524 GCCATGTGTCAACGATCGGTATA 60.798 47.826 20.98 1.05 0.00 1.47
3477 5744 3.734231 CCATGTGTCAACGATCGGTATAC 59.266 47.826 20.98 14.86 0.00 1.47
3478 5745 3.425577 TGTGTCAACGATCGGTATACC 57.574 47.619 20.98 12.27 0.00 2.73
3489 5756 2.294728 GGTATACCGTCAACGCTGC 58.705 57.895 6.06 0.00 38.18 5.25
3490 5757 1.477030 GGTATACCGTCAACGCTGCG 61.477 60.000 21.91 21.91 38.18 5.18
3491 5758 0.523968 GTATACCGTCAACGCTGCGA 60.524 55.000 30.47 2.82 38.18 5.10
3492 5759 0.523968 TATACCGTCAACGCTGCGAC 60.524 55.000 30.47 15.53 38.18 5.19
3500 5767 4.415332 ACGCTGCGACGTAGGGTG 62.415 66.667 29.32 9.21 46.19 4.61
3501 5768 4.415332 CGCTGCGACGTAGGGTGT 62.415 66.667 18.66 0.00 0.00 4.16
3502 5769 2.048503 GCTGCGACGTAGGGTGTT 60.049 61.111 14.91 0.00 0.00 3.32
3503 5770 2.092882 GCTGCGACGTAGGGTGTTC 61.093 63.158 14.91 0.00 0.00 3.18
3504 5771 1.585006 CTGCGACGTAGGGTGTTCT 59.415 57.895 4.89 0.00 0.00 3.01
3505 5772 0.038526 CTGCGACGTAGGGTGTTCTT 60.039 55.000 4.89 0.00 0.00 2.52
3506 5773 0.038892 TGCGACGTAGGGTGTTCTTC 60.039 55.000 0.00 0.00 0.00 2.87
3507 5774 0.243095 GCGACGTAGGGTGTTCTTCT 59.757 55.000 0.00 0.00 0.00 2.85
3508 5775 1.336609 GCGACGTAGGGTGTTCTTCTT 60.337 52.381 0.00 0.00 0.00 2.52
3509 5776 2.865276 GCGACGTAGGGTGTTCTTCTTT 60.865 50.000 0.00 0.00 0.00 2.52
3510 5777 3.387397 CGACGTAGGGTGTTCTTCTTTT 58.613 45.455 0.00 0.00 0.00 2.27
3511 5778 3.805971 CGACGTAGGGTGTTCTTCTTTTT 59.194 43.478 0.00 0.00 0.00 1.94
3512 5779 4.084693 CGACGTAGGGTGTTCTTCTTTTTC 60.085 45.833 0.00 0.00 0.00 2.29
3513 5780 4.773013 ACGTAGGGTGTTCTTCTTTTTCA 58.227 39.130 0.00 0.00 0.00 2.69
3514 5781 5.187687 ACGTAGGGTGTTCTTCTTTTTCAA 58.812 37.500 0.00 0.00 0.00 2.69
3515 5782 5.065602 ACGTAGGGTGTTCTTCTTTTTCAAC 59.934 40.000 0.00 0.00 0.00 3.18
3516 5783 5.065474 CGTAGGGTGTTCTTCTTTTTCAACA 59.935 40.000 0.00 0.00 0.00 3.33
3517 5784 5.993748 AGGGTGTTCTTCTTTTTCAACAA 57.006 34.783 0.00 0.00 30.73 2.83
3518 5785 6.353404 AGGGTGTTCTTCTTTTTCAACAAA 57.647 33.333 0.00 0.00 30.73 2.83
3519 5786 6.764379 AGGGTGTTCTTCTTTTTCAACAAAA 58.236 32.000 0.00 0.00 30.73 2.44
3520 5787 6.649141 AGGGTGTTCTTCTTTTTCAACAAAAC 59.351 34.615 0.00 0.00 30.89 2.43
3521 5788 6.128391 GGGTGTTCTTCTTTTTCAACAAAACC 60.128 38.462 0.00 0.00 30.89 3.27
3522 5789 6.649141 GGTGTTCTTCTTTTTCAACAAAACCT 59.351 34.615 0.00 0.00 30.89 3.50
3523 5790 7.148639 GGTGTTCTTCTTTTTCAACAAAACCTC 60.149 37.037 0.00 0.00 30.89 3.85
3524 5791 6.871492 TGTTCTTCTTTTTCAACAAAACCTCC 59.129 34.615 0.00 0.00 30.89 4.30
3525 5792 6.850752 TCTTCTTTTTCAACAAAACCTCCT 57.149 33.333 0.00 0.00 30.89 3.69
3526 5793 6.630071 TCTTCTTTTTCAACAAAACCTCCTG 58.370 36.000 0.00 0.00 30.89 3.86
3527 5794 6.435904 TCTTCTTTTTCAACAAAACCTCCTGA 59.564 34.615 0.00 0.00 30.89 3.86
3528 5795 6.207691 TCTTTTTCAACAAAACCTCCTGAG 57.792 37.500 0.00 0.00 30.89 3.35
3529 5796 5.949354 TCTTTTTCAACAAAACCTCCTGAGA 59.051 36.000 0.00 0.00 30.89 3.27
3530 5797 5.835113 TTTTCAACAAAACCTCCTGAGAG 57.165 39.130 0.00 0.00 40.09 3.20
3539 5806 3.289797 CTCCTGAGAGGCCACTACA 57.710 57.895 5.01 3.84 36.39 2.74
3540 5807 1.110442 CTCCTGAGAGGCCACTACAG 58.890 60.000 5.01 13.29 36.39 2.74
3541 5808 0.972983 TCCTGAGAGGCCACTACAGC 60.973 60.000 17.85 2.80 34.61 4.40
3542 5809 1.260538 CCTGAGAGGCCACTACAGCA 61.261 60.000 17.85 6.62 33.06 4.41
3543 5810 0.829333 CTGAGAGGCCACTACAGCAT 59.171 55.000 5.01 0.00 0.00 3.79
3544 5811 1.209019 CTGAGAGGCCACTACAGCATT 59.791 52.381 5.01 0.00 0.00 3.56
3545 5812 2.432146 CTGAGAGGCCACTACAGCATTA 59.568 50.000 5.01 0.00 0.00 1.90
3546 5813 3.041211 TGAGAGGCCACTACAGCATTAT 58.959 45.455 5.01 0.00 0.00 1.28
3547 5814 3.455910 TGAGAGGCCACTACAGCATTATT 59.544 43.478 5.01 0.00 0.00 1.40
3548 5815 4.653801 TGAGAGGCCACTACAGCATTATTA 59.346 41.667 5.01 0.00 0.00 0.98
3549 5816 5.130311 TGAGAGGCCACTACAGCATTATTAA 59.870 40.000 5.01 0.00 0.00 1.40
3550 5817 5.615289 AGAGGCCACTACAGCATTATTAAG 58.385 41.667 5.01 0.00 0.00 1.85
3551 5818 5.366768 AGAGGCCACTACAGCATTATTAAGA 59.633 40.000 5.01 0.00 0.00 2.10
3552 5819 6.001449 AGGCCACTACAGCATTATTAAGAA 57.999 37.500 5.01 0.00 0.00 2.52
3553 5820 6.423182 AGGCCACTACAGCATTATTAAGAAA 58.577 36.000 5.01 0.00 0.00 2.52
3554 5821 6.889722 AGGCCACTACAGCATTATTAAGAAAA 59.110 34.615 5.01 0.00 0.00 2.29
3555 5822 7.396055 AGGCCACTACAGCATTATTAAGAAAAA 59.604 33.333 5.01 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.095807 GCGAGGAAACCTATGCACCC 61.096 60.000 0.00 0.00 35.83 4.61
1 2 1.095807 GGCGAGGAAACCTATGCACC 61.096 60.000 13.66 0.00 36.99 5.01
2 3 1.095807 GGGCGAGGAAACCTATGCAC 61.096 60.000 13.66 8.34 36.99 4.57
3 4 1.223487 GGGCGAGGAAACCTATGCA 59.777 57.895 13.66 0.00 36.99 3.96
4 5 1.526225 GGGGCGAGGAAACCTATGC 60.526 63.158 0.00 0.00 35.27 3.14
5 6 0.179045 CTGGGGCGAGGAAACCTATG 60.179 60.000 0.00 0.00 31.76 2.23
6 7 1.984288 GCTGGGGCGAGGAAACCTAT 61.984 60.000 0.00 0.00 31.76 2.57
7 8 2.666098 GCTGGGGCGAGGAAACCTA 61.666 63.158 0.00 0.00 31.76 3.08
8 9 4.035102 GCTGGGGCGAGGAAACCT 62.035 66.667 0.00 0.00 36.03 3.50
26 27 2.622447 ATTTCGAAGGGGGTGGGGG 61.622 63.158 0.00 0.00 0.00 5.40
27 28 1.379843 CATTTCGAAGGGGGTGGGG 60.380 63.158 0.00 0.00 0.00 4.96
28 29 1.379843 CCATTTCGAAGGGGGTGGG 60.380 63.158 9.45 0.00 0.00 4.61
29 30 4.337013 CCATTTCGAAGGGGGTGG 57.663 61.111 9.45 5.85 0.00 4.61
35 36 1.133976 AGATCCAGCCCATTTCGAAGG 60.134 52.381 0.00 0.00 0.00 3.46
36 37 2.158842 AGAGATCCAGCCCATTTCGAAG 60.159 50.000 0.00 0.00 0.00 3.79
37 38 1.839994 AGAGATCCAGCCCATTTCGAA 59.160 47.619 0.00 0.00 0.00 3.71
38 39 1.500474 AGAGATCCAGCCCATTTCGA 58.500 50.000 0.00 0.00 0.00 3.71
39 40 2.869636 GCTAGAGATCCAGCCCATTTCG 60.870 54.545 0.00 0.00 0.00 3.46
40 41 2.105477 TGCTAGAGATCCAGCCCATTTC 59.895 50.000 8.60 0.00 36.95 2.17
41 42 2.130193 TGCTAGAGATCCAGCCCATTT 58.870 47.619 8.60 0.00 36.95 2.32
42 43 1.811778 TGCTAGAGATCCAGCCCATT 58.188 50.000 8.60 0.00 36.95 3.16
43 44 1.811778 TTGCTAGAGATCCAGCCCAT 58.188 50.000 8.60 0.00 36.95 4.00
44 45 1.210478 GTTTGCTAGAGATCCAGCCCA 59.790 52.381 8.60 0.00 36.95 5.36
45 46 1.808133 CGTTTGCTAGAGATCCAGCCC 60.808 57.143 8.60 0.00 36.95 5.19
46 47 1.576356 CGTTTGCTAGAGATCCAGCC 58.424 55.000 8.60 0.00 36.95 4.85
47 48 0.933796 GCGTTTGCTAGAGATCCAGC 59.066 55.000 0.00 4.94 38.39 4.85
125 127 8.707839 TCAAGAACAAAGTTTTTGAATGTTGTC 58.292 29.630 11.82 0.00 34.59 3.18
127 129 9.480538 CATCAAGAACAAAGTTTTTGAATGTTG 57.519 29.630 16.38 9.83 34.59 3.33
164 166 9.301153 ACATACATTTCTTTGAAACACAAGAAC 57.699 29.630 0.00 0.00 39.77 3.01
167 169 8.745837 GTCACATACATTTCTTTGAAACACAAG 58.254 33.333 0.00 0.00 39.77 3.16
346 353 9.932207 TGAACATTGCTTTGAATGATAAAGAAT 57.068 25.926 0.00 0.00 37.33 2.40
349 356 9.967245 CATTGAACATTGCTTTGAATGATAAAG 57.033 29.630 0.00 0.00 36.89 1.85
351 358 7.201453 CGCATTGAACATTGCTTTGAATGATAA 60.201 33.333 15.95 0.00 36.89 1.75
564 614 0.316689 CAACGGTTTTCTGTGTCGGC 60.317 55.000 0.00 0.00 39.64 5.54
636 693 4.317245 CGTTAAACCGTATACTGCGTTTG 58.683 43.478 16.60 3.79 0.00 2.93
714 772 4.000988 CAGAGCTACTTTCGGCCTTTTTA 58.999 43.478 0.00 0.00 0.00 1.52
788 867 2.442272 AGGATGGGTCGGTCGAGG 60.442 66.667 0.00 0.00 0.00 4.63
792 871 2.916527 TACGGGAGGATGGGTCGGTC 62.917 65.000 0.00 0.00 0.00 4.79
886 976 1.370657 CGGTCGCGATCCTTCTAGC 60.371 63.158 14.06 0.00 0.00 3.42
985 1077 4.637489 CATCTCGAGCCGGAGCCG 62.637 72.222 5.05 4.70 41.25 5.52
986 1078 4.959596 GCATCTCGAGCCGGAGCC 62.960 72.222 5.05 0.00 41.25 4.70
1248 1376 2.415825 CATCTCCATGCTTGCAGGG 58.584 57.895 18.81 18.81 0.00 4.45
1387 1525 2.654912 GACGACGCCGAACAACCTG 61.655 63.158 0.00 0.00 39.50 4.00
1429 1567 2.279517 ATGTTCTCGATCGCGCCC 60.280 61.111 11.09 0.00 37.46 6.13
1482 1620 1.738365 CGAGGTTGATCTCAGTGGCAG 60.738 57.143 0.00 0.00 33.59 4.85
1564 1702 1.474077 GCGAATTTGCCATTGAGGTCT 59.526 47.619 6.38 0.00 40.61 3.85
1568 1706 1.981254 AACGCGAATTTGCCATTGAG 58.019 45.000 15.93 0.00 0.00 3.02
1672 1824 1.019278 ACTGCGATAACTGCGTTGGG 61.019 55.000 4.52 0.00 34.24 4.12
1695 1928 7.548427 TCAAAATCTTCAAACTGAAACATGCAA 59.452 29.630 0.00 0.00 35.73 4.08
1706 1939 6.040166 AGCTGACATGTCAAAATCTTCAAACT 59.960 34.615 27.63 8.94 39.39 2.66
1707 1940 6.211515 AGCTGACATGTCAAAATCTTCAAAC 58.788 36.000 27.63 7.11 39.39 2.93
1708 1941 6.263842 AGAGCTGACATGTCAAAATCTTCAAA 59.736 34.615 27.63 2.15 39.39 2.69
1722 1955 7.656412 AGTGACAGTATATAAGAGCTGACATG 58.344 38.462 0.00 0.00 36.45 3.21
1855 3964 9.174166 GAATATATTGTATAAACGAGCCCCAAT 57.826 33.333 1.78 0.00 0.00 3.16
1875 3985 9.301897 AGTACTAGATGTCACATGCTGAATATA 57.698 33.333 0.00 0.00 0.00 0.86
1893 4003 6.684686 ACATACTTTGCGTTTGAGTACTAGA 58.315 36.000 0.00 0.00 0.00 2.43
1894 4004 6.034683 GGACATACTTTGCGTTTGAGTACTAG 59.965 42.308 0.00 0.00 0.00 2.57
1898 4008 3.676172 CGGACATACTTTGCGTTTGAGTA 59.324 43.478 0.00 0.00 0.00 2.59
1903 4013 1.802365 GTCCGGACATACTTTGCGTTT 59.198 47.619 29.75 0.00 0.00 3.60
1904 4014 1.270412 TGTCCGGACATACTTTGCGTT 60.270 47.619 33.23 0.00 36.21 4.84
1905 4015 0.319083 TGTCCGGACATACTTTGCGT 59.681 50.000 33.23 0.00 36.21 5.24
1906 4016 0.999406 CTGTCCGGACATACTTTGCG 59.001 55.000 36.21 18.79 41.01 4.85
1907 4017 2.000447 GTCTGTCCGGACATACTTTGC 59.000 52.381 34.03 16.08 41.01 3.68
1908 4018 2.094906 TCGTCTGTCCGGACATACTTTG 60.095 50.000 35.93 25.98 41.01 2.77
2086 4197 6.472887 TGCAGTACTAAGCAAGGAGTAATTT 58.527 36.000 5.46 0.00 37.90 1.82
2098 4209 9.840427 TCAATTAATTTCTTTGCAGTACTAAGC 57.160 29.630 0.00 0.00 31.96 3.09
2160 4286 2.094904 CCAGTAAAATGGGACGCCG 58.905 57.895 0.00 0.00 36.64 6.46
2192 4318 1.134788 CGGACACTACAAGATGACCCC 60.135 57.143 0.00 0.00 0.00 4.95
2225 4351 1.511850 TCCACATGCGTTCTTCACAG 58.488 50.000 0.00 0.00 0.00 3.66
2238 4364 1.818674 GGTGCGAAGGATTTTCCACAT 59.181 47.619 0.00 0.00 39.61 3.21
2250 4376 0.527565 CTTTGGGGAATGGTGCGAAG 59.472 55.000 0.00 0.00 0.00 3.79
2272 4398 1.594862 GCTTGATTGCGATCTAAGCGT 59.405 47.619 23.50 0.00 37.04 5.07
2276 4402 3.009026 TGCTTGCTTGATTGCGATCTAA 58.991 40.909 15.08 6.99 35.36 2.10
2279 4405 2.267188 TTGCTTGCTTGATTGCGATC 57.733 45.000 7.02 7.02 35.36 3.69
2282 4408 0.911856 CGATTGCTTGCTTGATTGCG 59.088 50.000 0.00 0.00 35.36 4.85
2302 4429 7.825761 TGAAAAGAATATCAGAGATGCTTGTGA 59.174 33.333 0.00 0.00 0.00 3.58
2375 4502 1.698067 AACCCCCGGAAGTCGTGAAA 61.698 55.000 0.73 0.00 37.11 2.69
2384 4511 2.434331 CTCTGCAAACCCCCGGAA 59.566 61.111 0.73 0.00 0.00 4.30
2571 4698 2.647529 TATACCATATGCCTGCGACG 57.352 50.000 0.00 0.00 0.00 5.12
2595 4722 3.584848 ACTGCACCAGGATTCTAACTTCT 59.415 43.478 0.00 0.00 35.51 2.85
2596 4723 3.944087 ACTGCACCAGGATTCTAACTTC 58.056 45.455 0.00 0.00 35.51 3.01
2597 4724 4.074970 CAACTGCACCAGGATTCTAACTT 58.925 43.478 0.00 0.00 35.51 2.66
2598 4725 3.679389 CAACTGCACCAGGATTCTAACT 58.321 45.455 0.00 0.00 35.51 2.24
2599 4726 2.162408 GCAACTGCACCAGGATTCTAAC 59.838 50.000 0.00 0.00 41.59 2.34
2600 4727 2.436417 GCAACTGCACCAGGATTCTAA 58.564 47.619 0.00 0.00 41.59 2.10
2625 4752 3.222603 CCCTGAGCCCAATTATTACCAC 58.777 50.000 0.00 0.00 0.00 4.16
2646 4773 3.608432 GCAAAGGCCATCCCTGAC 58.392 61.111 5.01 0.00 45.62 3.51
2701 4831 7.166691 ACTACTATGTAACCTTGTACCACAG 57.833 40.000 0.00 0.00 0.00 3.66
2795 5056 2.579207 TAGTAGAATGCTGACGGTGC 57.421 50.000 0.00 0.00 29.76 5.01
2799 5060 4.795795 CACTCAGTTAGTAGAATGCTGACG 59.204 45.833 0.00 0.00 42.00 4.35
2881 5142 9.838339 GAGAATTCTTCCTCTCCATGTAAATTA 57.162 33.333 9.87 0.00 33.36 1.40
2882 5143 8.744568 GAGAATTCTTCCTCTCCATGTAAATT 57.255 34.615 9.87 0.00 33.36 1.82
2892 5153 3.713764 TCCATGGGAGAATTCTTCCTCTC 59.286 47.826 29.37 9.55 42.41 3.20
2893 5154 3.457749 GTCCATGGGAGAATTCTTCCTCT 59.542 47.826 29.37 16.37 42.41 3.69
2894 5155 3.434310 GGTCCATGGGAGAATTCTTCCTC 60.434 52.174 29.37 15.67 42.41 3.71
2895 5156 2.511637 GGTCCATGGGAGAATTCTTCCT 59.488 50.000 29.37 14.87 42.41 3.36
2896 5157 2.511637 AGGTCCATGGGAGAATTCTTCC 59.488 50.000 24.23 24.23 42.26 3.46
2897 5158 3.941704 AGGTCCATGGGAGAATTCTTC 57.058 47.619 13.02 7.41 29.39 2.87
2898 5159 3.137360 GCTAGGTCCATGGGAGAATTCTT 59.863 47.826 13.02 0.00 29.39 2.52
2899 5160 2.708325 GCTAGGTCCATGGGAGAATTCT 59.292 50.000 13.02 7.95 29.39 2.40
2900 5161 2.708325 AGCTAGGTCCATGGGAGAATTC 59.292 50.000 13.02 0.00 29.39 2.17
2901 5162 2.441001 CAGCTAGGTCCATGGGAGAATT 59.559 50.000 13.02 0.00 29.39 2.17
2902 5163 2.053244 CAGCTAGGTCCATGGGAGAAT 58.947 52.381 13.02 0.00 29.39 2.40
2903 5164 1.273838 ACAGCTAGGTCCATGGGAGAA 60.274 52.381 13.02 0.00 29.39 2.87
2904 5165 0.339859 ACAGCTAGGTCCATGGGAGA 59.660 55.000 13.02 0.00 29.39 3.71
2905 5166 1.967066 CTACAGCTAGGTCCATGGGAG 59.033 57.143 13.02 5.74 29.39 4.30
2906 5167 2.034799 GCTACAGCTAGGTCCATGGGA 61.035 57.143 13.02 0.00 38.21 4.37
2907 5168 0.394565 GCTACAGCTAGGTCCATGGG 59.605 60.000 13.02 0.00 38.21 4.00
2908 5169 1.069823 CTGCTACAGCTAGGTCCATGG 59.930 57.143 4.97 4.97 42.66 3.66
2909 5170 2.034878 TCTGCTACAGCTAGGTCCATG 58.965 52.381 2.44 0.00 42.66 3.66
2910 5171 2.035632 GTCTGCTACAGCTAGGTCCAT 58.964 52.381 2.44 0.00 42.66 3.41
2911 5172 1.272480 TGTCTGCTACAGCTAGGTCCA 60.272 52.381 2.44 0.00 42.66 4.02
2912 5173 1.475403 TGTCTGCTACAGCTAGGTCC 58.525 55.000 2.44 0.00 42.66 4.46
2921 5182 1.578897 TTATGCCCCTGTCTGCTACA 58.421 50.000 0.00 0.00 36.42 2.74
2922 5183 2.104792 TCATTATGCCCCTGTCTGCTAC 59.895 50.000 0.00 0.00 0.00 3.58
2923 5184 2.104792 GTCATTATGCCCCTGTCTGCTA 59.895 50.000 0.00 0.00 0.00 3.49
2924 5185 1.133976 GTCATTATGCCCCTGTCTGCT 60.134 52.381 0.00 0.00 0.00 4.24
2952 5213 1.800586 ACACTATTTCAGCACAGCACG 59.199 47.619 0.00 0.00 0.00 5.34
2955 5216 5.637810 TGTAGTAACACTATTTCAGCACAGC 59.362 40.000 0.00 0.00 32.65 4.40
2978 5239 1.337728 TGCCTGACAGTCCGTTACATG 60.338 52.381 0.93 0.00 0.00 3.21
3002 5263 3.912496 ACTTATGTGGCATCTACAGCA 57.088 42.857 0.00 0.00 0.00 4.41
3011 5272 2.092103 GGGGGAATGTACTTATGTGGCA 60.092 50.000 0.00 0.00 0.00 4.92
3012 5273 2.174854 AGGGGGAATGTACTTATGTGGC 59.825 50.000 0.00 0.00 0.00 5.01
3015 5276 5.193728 ACATCAAGGGGGAATGTACTTATGT 59.806 40.000 0.00 0.00 0.00 2.29
3019 5280 3.591527 TGACATCAAGGGGGAATGTACTT 59.408 43.478 0.00 0.00 0.00 2.24
3027 5288 1.381867 ATTGGTGACATCAAGGGGGA 58.618 50.000 7.32 0.00 42.32 4.81
3041 5302 4.281688 AGCAGACTTGTGCAAATTATTGGT 59.718 37.500 0.75 0.00 46.60 3.67
3051 5312 1.102809 CCCAACAGCAGACTTGTGCA 61.103 55.000 0.75 0.00 46.60 4.57
3060 5321 0.744414 CACCCGTATCCCAACAGCAG 60.744 60.000 0.00 0.00 0.00 4.24
3063 5326 1.451387 GCCACCCGTATCCCAACAG 60.451 63.158 0.00 0.00 0.00 3.16
3090 5353 0.323633 CACCTGCACCATGGGATTCA 60.324 55.000 18.09 6.99 0.00 2.57
3103 5366 2.674380 CCCTGAACCTGCACCTGC 60.674 66.667 0.00 0.00 42.50 4.85
3105 5368 2.121963 TCCCCTGAACCTGCACCT 60.122 61.111 0.00 0.00 0.00 4.00
3106 5369 2.034221 GTCCCCTGAACCTGCACC 59.966 66.667 0.00 0.00 0.00 5.01
3107 5370 2.358737 CGTCCCCTGAACCTGCAC 60.359 66.667 0.00 0.00 0.00 4.57
3108 5371 2.847234 ACGTCCCCTGAACCTGCA 60.847 61.111 0.00 0.00 0.00 4.41
3110 5373 1.004918 GACACGTCCCCTGAACCTG 60.005 63.158 0.00 0.00 0.00 4.00
3111 5374 0.763223 AAGACACGTCCCCTGAACCT 60.763 55.000 0.00 0.00 0.00 3.50
3112 5375 0.602905 CAAGACACGTCCCCTGAACC 60.603 60.000 0.00 0.00 0.00 3.62
3113 5376 1.228657 GCAAGACACGTCCCCTGAAC 61.229 60.000 0.00 0.00 0.00 3.18
3114 5377 1.070786 GCAAGACACGTCCCCTGAA 59.929 57.895 0.00 0.00 0.00 3.02
3115 5378 1.837051 AGCAAGACACGTCCCCTGA 60.837 57.895 0.00 0.00 0.00 3.86
3116 5379 1.669115 CAGCAAGACACGTCCCCTG 60.669 63.158 0.00 0.00 0.00 4.45
3117 5380 0.830444 TACAGCAAGACACGTCCCCT 60.830 55.000 0.00 0.00 0.00 4.79
3119 5382 1.014564 GCTACAGCAAGACACGTCCC 61.015 60.000 0.00 0.00 41.59 4.46
3121 5384 1.784525 AAGCTACAGCAAGACACGTC 58.215 50.000 3.70 0.00 45.16 4.34
3123 5386 2.663602 CAGTAAGCTACAGCAAGACACG 59.336 50.000 3.70 0.00 45.16 4.49
3124 5387 3.654414 ACAGTAAGCTACAGCAAGACAC 58.346 45.455 3.70 0.00 45.16 3.67
3125 5388 4.058124 CAACAGTAAGCTACAGCAAGACA 58.942 43.478 3.70 0.00 45.16 3.41
3126 5389 4.058817 ACAACAGTAAGCTACAGCAAGAC 58.941 43.478 3.70 0.00 45.16 3.01
3130 5393 3.306088 GGAGACAACAGTAAGCTACAGCA 60.306 47.826 3.70 0.00 45.16 4.41
3147 5410 4.373116 TGTGCTTCGGCCGGAGAC 62.373 66.667 37.89 28.47 40.91 3.36
3156 5419 2.668457 GTCCATACTCAACTGTGCTTCG 59.332 50.000 0.00 0.00 0.00 3.79
3167 5430 1.704641 CTCCCCATCGTCCATACTCA 58.295 55.000 0.00 0.00 0.00 3.41
3168 5431 0.318762 GCTCCCCATCGTCCATACTC 59.681 60.000 0.00 0.00 0.00 2.59
3169 5432 1.464376 CGCTCCCCATCGTCCATACT 61.464 60.000 0.00 0.00 0.00 2.12
3171 5434 2.867855 GCGCTCCCCATCGTCCATA 61.868 63.158 0.00 0.00 0.00 2.74
3172 5435 4.241555 GCGCTCCCCATCGTCCAT 62.242 66.667 0.00 0.00 0.00 3.41
3176 5439 1.457823 TTATACGCGCTCCCCATCGT 61.458 55.000 5.73 0.00 38.75 3.73
3180 5447 0.250124 CCAATTATACGCGCTCCCCA 60.250 55.000 5.73 0.00 0.00 4.96
3231 5498 6.821160 TCAGATCTTGTTACTGTTGTGTCAAA 59.179 34.615 0.00 0.00 33.93 2.69
3237 5504 6.491745 TCTCTCTCAGATCTTGTTACTGTTGT 59.508 38.462 0.00 0.00 33.93 3.32
3240 5507 5.125417 GCTCTCTCTCAGATCTTGTTACTGT 59.875 44.000 0.00 0.00 33.93 3.55
3243 5510 5.450412 CCTGCTCTCTCTCAGATCTTGTTAC 60.450 48.000 0.00 0.00 32.26 2.50
3248 5515 2.669781 CCCTGCTCTCTCTCAGATCTT 58.330 52.381 0.00 0.00 32.26 2.40
3252 5519 0.032316 ATGCCCTGCTCTCTCTCAGA 60.032 55.000 0.00 0.00 32.26 3.27
3253 5520 0.831966 AATGCCCTGCTCTCTCTCAG 59.168 55.000 0.00 0.00 0.00 3.35
3254 5521 1.209019 GAAATGCCCTGCTCTCTCTCA 59.791 52.381 0.00 0.00 0.00 3.27
3255 5522 1.805871 CGAAATGCCCTGCTCTCTCTC 60.806 57.143 0.00 0.00 0.00 3.20
3256 5523 0.177604 CGAAATGCCCTGCTCTCTCT 59.822 55.000 0.00 0.00 0.00 3.10
3257 5524 0.107945 ACGAAATGCCCTGCTCTCTC 60.108 55.000 0.00 0.00 0.00 3.20
3258 5525 1.137872 CTACGAAATGCCCTGCTCTCT 59.862 52.381 0.00 0.00 0.00 3.10
3259 5526 1.137086 TCTACGAAATGCCCTGCTCTC 59.863 52.381 0.00 0.00 0.00 3.20
3260 5527 1.137872 CTCTACGAAATGCCCTGCTCT 59.862 52.381 0.00 0.00 0.00 4.09
3261 5528 1.134670 ACTCTACGAAATGCCCTGCTC 60.135 52.381 0.00 0.00 0.00 4.26
3262 5529 0.905357 ACTCTACGAAATGCCCTGCT 59.095 50.000 0.00 0.00 0.00 4.24
3263 5530 2.596904 TACTCTACGAAATGCCCTGC 57.403 50.000 0.00 0.00 0.00 4.85
3264 5531 8.709646 GTTTATTATACTCTACGAAATGCCCTG 58.290 37.037 0.00 0.00 0.00 4.45
3265 5532 8.426489 TGTTTATTATACTCTACGAAATGCCCT 58.574 33.333 0.00 0.00 0.00 5.19
3266 5533 8.597662 TGTTTATTATACTCTACGAAATGCCC 57.402 34.615 0.00 0.00 0.00 5.36
3274 5541 9.613957 CCAGAGACATGTTTATTATACTCTACG 57.386 37.037 0.00 0.00 33.18 3.51
3275 5542 9.413048 GCCAGAGACATGTTTATTATACTCTAC 57.587 37.037 0.00 0.00 33.18 2.59
3276 5543 9.368416 AGCCAGAGACATGTTTATTATACTCTA 57.632 33.333 0.00 0.00 33.18 2.43
3277 5544 8.256356 AGCCAGAGACATGTTTATTATACTCT 57.744 34.615 0.00 1.45 34.47 3.24
3278 5545 8.364142 AGAGCCAGAGACATGTTTATTATACTC 58.636 37.037 0.00 0.00 0.00 2.59
3279 5546 8.147058 CAGAGCCAGAGACATGTTTATTATACT 58.853 37.037 0.00 0.00 0.00 2.12
3280 5547 8.144478 TCAGAGCCAGAGACATGTTTATTATAC 58.856 37.037 0.00 0.00 0.00 1.47
3281 5548 8.250143 TCAGAGCCAGAGACATGTTTATTATA 57.750 34.615 0.00 0.00 0.00 0.98
3282 5549 7.129457 TCAGAGCCAGAGACATGTTTATTAT 57.871 36.000 0.00 0.00 0.00 1.28
3283 5550 6.544928 TCAGAGCCAGAGACATGTTTATTA 57.455 37.500 0.00 0.00 0.00 0.98
3284 5551 5.426689 TCAGAGCCAGAGACATGTTTATT 57.573 39.130 0.00 0.00 0.00 1.40
3285 5552 5.426689 TTCAGAGCCAGAGACATGTTTAT 57.573 39.130 0.00 0.00 0.00 1.40
3286 5553 4.890158 TTCAGAGCCAGAGACATGTTTA 57.110 40.909 0.00 0.00 0.00 2.01
3287 5554 3.777106 TTCAGAGCCAGAGACATGTTT 57.223 42.857 0.00 0.00 0.00 2.83
3288 5555 3.996921 ATTCAGAGCCAGAGACATGTT 57.003 42.857 0.00 0.00 0.00 2.71
3289 5556 3.518705 AGAATTCAGAGCCAGAGACATGT 59.481 43.478 8.44 0.00 0.00 3.21
3290 5557 4.121317 GAGAATTCAGAGCCAGAGACATG 58.879 47.826 8.44 0.00 0.00 3.21
3291 5558 3.181477 CGAGAATTCAGAGCCAGAGACAT 60.181 47.826 8.44 0.00 0.00 3.06
3292 5559 2.165234 CGAGAATTCAGAGCCAGAGACA 59.835 50.000 8.44 0.00 0.00 3.41
3293 5560 2.165437 ACGAGAATTCAGAGCCAGAGAC 59.835 50.000 8.44 0.00 0.00 3.36
3294 5561 2.451490 ACGAGAATTCAGAGCCAGAGA 58.549 47.619 8.44 0.00 0.00 3.10
3295 5562 2.957491 ACGAGAATTCAGAGCCAGAG 57.043 50.000 8.44 0.00 0.00 3.35
3296 5563 3.685139 AAACGAGAATTCAGAGCCAGA 57.315 42.857 8.44 0.00 0.00 3.86
3297 5564 4.023707 ACAAAAACGAGAATTCAGAGCCAG 60.024 41.667 8.44 0.00 0.00 4.85
3298 5565 3.882888 ACAAAAACGAGAATTCAGAGCCA 59.117 39.130 8.44 0.00 0.00 4.75
3299 5566 4.489679 ACAAAAACGAGAATTCAGAGCC 57.510 40.909 8.44 0.00 0.00 4.70
3300 5567 4.912187 GGAACAAAAACGAGAATTCAGAGC 59.088 41.667 8.44 0.00 0.00 4.09
3301 5568 6.305693 AGGAACAAAAACGAGAATTCAGAG 57.694 37.500 8.44 0.82 0.00 3.35
3302 5569 6.990349 ACTAGGAACAAAAACGAGAATTCAGA 59.010 34.615 8.44 0.00 0.00 3.27
3303 5570 7.072030 CACTAGGAACAAAAACGAGAATTCAG 58.928 38.462 8.44 3.81 0.00 3.02
3304 5571 6.512741 GCACTAGGAACAAAAACGAGAATTCA 60.513 38.462 8.44 0.00 0.00 2.57
3305 5572 5.851703 GCACTAGGAACAAAAACGAGAATTC 59.148 40.000 0.00 0.00 0.00 2.17
3306 5573 5.531287 AGCACTAGGAACAAAAACGAGAATT 59.469 36.000 0.00 0.00 0.00 2.17
3307 5574 5.049405 CAGCACTAGGAACAAAAACGAGAAT 60.049 40.000 0.00 0.00 0.00 2.40
3308 5575 4.272504 CAGCACTAGGAACAAAAACGAGAA 59.727 41.667 0.00 0.00 0.00 2.87
3309 5576 3.807622 CAGCACTAGGAACAAAAACGAGA 59.192 43.478 0.00 0.00 0.00 4.04
3310 5577 3.560068 ACAGCACTAGGAACAAAAACGAG 59.440 43.478 0.00 0.00 0.00 4.18
3311 5578 3.537580 ACAGCACTAGGAACAAAAACGA 58.462 40.909 0.00 0.00 0.00 3.85
3312 5579 3.963383 ACAGCACTAGGAACAAAAACG 57.037 42.857 0.00 0.00 0.00 3.60
3313 5580 7.422399 TGAATTACAGCACTAGGAACAAAAAC 58.578 34.615 0.00 0.00 0.00 2.43
3314 5581 7.575414 TGAATTACAGCACTAGGAACAAAAA 57.425 32.000 0.00 0.00 0.00 1.94
3315 5582 7.575414 TTGAATTACAGCACTAGGAACAAAA 57.425 32.000 0.00 0.00 0.00 2.44
3316 5583 7.575414 TTTGAATTACAGCACTAGGAACAAA 57.425 32.000 0.00 0.00 0.00 2.83
3317 5584 7.500892 TCTTTTGAATTACAGCACTAGGAACAA 59.499 33.333 0.00 0.00 0.00 2.83
3318 5585 6.995686 TCTTTTGAATTACAGCACTAGGAACA 59.004 34.615 0.00 0.00 0.00 3.18
3319 5586 7.435068 TCTTTTGAATTACAGCACTAGGAAC 57.565 36.000 0.00 0.00 0.00 3.62
3320 5587 7.040686 GGTTCTTTTGAATTACAGCACTAGGAA 60.041 37.037 0.00 0.00 40.94 3.36
3321 5588 6.430000 GGTTCTTTTGAATTACAGCACTAGGA 59.570 38.462 0.00 0.00 40.94 2.94
3322 5589 6.206634 TGGTTCTTTTGAATTACAGCACTAGG 59.793 38.462 0.00 0.00 40.94 3.02
3323 5590 7.041098 ACTGGTTCTTTTGAATTACAGCACTAG 60.041 37.037 0.00 0.00 40.94 2.57
3324 5591 6.770785 ACTGGTTCTTTTGAATTACAGCACTA 59.229 34.615 0.00 0.00 40.94 2.74
3325 5592 5.594317 ACTGGTTCTTTTGAATTACAGCACT 59.406 36.000 0.00 0.00 40.94 4.40
3326 5593 5.831997 ACTGGTTCTTTTGAATTACAGCAC 58.168 37.500 0.00 0.00 40.94 4.40
3327 5594 6.463995 AACTGGTTCTTTTGAATTACAGCA 57.536 33.333 0.00 0.00 40.94 4.41
3328 5595 8.865590 TTAAACTGGTTCTTTTGAATTACAGC 57.134 30.769 0.00 0.00 40.94 4.40
3334 5601 9.476202 GCTGTAATTAAACTGGTTCTTTTGAAT 57.524 29.630 0.00 0.00 40.94 2.57
3335 5602 7.646130 CGCTGTAATTAAACTGGTTCTTTTGAA 59.354 33.333 0.00 0.00 35.84 2.69
3336 5603 7.012515 TCGCTGTAATTAAACTGGTTCTTTTGA 59.987 33.333 0.00 0.00 0.00 2.69
3337 5604 7.136119 TCGCTGTAATTAAACTGGTTCTTTTG 58.864 34.615 0.00 0.00 0.00 2.44
3338 5605 7.266922 TCGCTGTAATTAAACTGGTTCTTTT 57.733 32.000 0.00 0.00 0.00 2.27
3339 5606 6.870971 TCGCTGTAATTAAACTGGTTCTTT 57.129 33.333 0.00 0.00 0.00 2.52
3340 5607 6.653320 TGATCGCTGTAATTAAACTGGTTCTT 59.347 34.615 0.00 0.00 0.00 2.52
3341 5608 6.170506 TGATCGCTGTAATTAAACTGGTTCT 58.829 36.000 0.00 0.00 0.00 3.01
3342 5609 6.417191 TGATCGCTGTAATTAAACTGGTTC 57.583 37.500 0.00 0.00 0.00 3.62
3343 5610 6.811253 TTGATCGCTGTAATTAAACTGGTT 57.189 33.333 0.00 0.00 0.00 3.67
3344 5611 6.205853 TGTTTGATCGCTGTAATTAAACTGGT 59.794 34.615 0.00 0.00 35.07 4.00
3345 5612 6.607689 TGTTTGATCGCTGTAATTAAACTGG 58.392 36.000 0.00 0.00 35.07 4.00
3346 5613 8.577939 CAATGTTTGATCGCTGTAATTAAACTG 58.422 33.333 0.00 0.00 35.07 3.16
3347 5614 7.273381 GCAATGTTTGATCGCTGTAATTAAACT 59.727 33.333 0.00 0.00 35.07 2.66
3348 5615 7.273381 AGCAATGTTTGATCGCTGTAATTAAAC 59.727 33.333 0.00 0.00 34.77 2.01
3349 5616 7.273164 CAGCAATGTTTGATCGCTGTAATTAAA 59.727 33.333 7.97 0.00 43.94 1.52
3350 5617 6.746822 CAGCAATGTTTGATCGCTGTAATTAA 59.253 34.615 7.97 0.00 43.94 1.40
3351 5618 6.257423 CAGCAATGTTTGATCGCTGTAATTA 58.743 36.000 7.97 0.00 43.94 1.40
3352 5619 5.097529 CAGCAATGTTTGATCGCTGTAATT 58.902 37.500 7.97 0.00 43.94 1.40
3353 5620 4.665212 CAGCAATGTTTGATCGCTGTAAT 58.335 39.130 7.97 0.00 43.94 1.89
3354 5621 4.082274 CAGCAATGTTTGATCGCTGTAA 57.918 40.909 7.97 0.00 43.94 2.41
3355 5622 3.745332 CAGCAATGTTTGATCGCTGTA 57.255 42.857 7.97 0.00 43.94 2.74
3356 5623 2.624316 CAGCAATGTTTGATCGCTGT 57.376 45.000 7.97 0.00 43.94 4.40
3358 5625 2.095567 GTGTCAGCAATGTTTGATCGCT 60.096 45.455 0.00 0.00 0.00 4.93
3359 5626 2.095567 AGTGTCAGCAATGTTTGATCGC 60.096 45.455 0.00 0.00 0.00 4.58
3360 5627 3.818961 AGTGTCAGCAATGTTTGATCG 57.181 42.857 0.00 0.00 0.00 3.69
3361 5628 5.049198 TCTCAAGTGTCAGCAATGTTTGATC 60.049 40.000 0.00 0.00 0.00 2.92
3362 5629 4.823442 TCTCAAGTGTCAGCAATGTTTGAT 59.177 37.500 0.00 0.00 0.00 2.57
3363 5630 4.198530 TCTCAAGTGTCAGCAATGTTTGA 58.801 39.130 0.00 0.00 0.00 2.69
3364 5631 4.274214 TCTCTCAAGTGTCAGCAATGTTTG 59.726 41.667 0.00 0.00 0.00 2.93
3365 5632 4.454678 TCTCTCAAGTGTCAGCAATGTTT 58.545 39.130 0.00 0.00 0.00 2.83
3366 5633 4.077300 TCTCTCAAGTGTCAGCAATGTT 57.923 40.909 0.00 0.00 0.00 2.71
3367 5634 3.758755 TCTCTCAAGTGTCAGCAATGT 57.241 42.857 0.00 0.00 0.00 2.71
3368 5635 5.428496 TTTTCTCTCAAGTGTCAGCAATG 57.572 39.130 0.00 0.00 0.00 2.82
3369 5636 5.009410 CCTTTTTCTCTCAAGTGTCAGCAAT 59.991 40.000 0.00 0.00 0.00 3.56
3370 5637 4.336433 CCTTTTTCTCTCAAGTGTCAGCAA 59.664 41.667 0.00 0.00 0.00 3.91
3371 5638 3.879295 CCTTTTTCTCTCAAGTGTCAGCA 59.121 43.478 0.00 0.00 0.00 4.41
3372 5639 3.304324 GCCTTTTTCTCTCAAGTGTCAGC 60.304 47.826 0.00 0.00 0.00 4.26
3373 5640 3.251972 GGCCTTTTTCTCTCAAGTGTCAG 59.748 47.826 0.00 0.00 0.00 3.51
3374 5641 3.214328 GGCCTTTTTCTCTCAAGTGTCA 58.786 45.455 0.00 0.00 0.00 3.58
3375 5642 3.003793 GTGGCCTTTTTCTCTCAAGTGTC 59.996 47.826 3.32 0.00 0.00 3.67
3376 5643 2.952310 GTGGCCTTTTTCTCTCAAGTGT 59.048 45.455 3.32 0.00 0.00 3.55
3377 5644 2.294512 GGTGGCCTTTTTCTCTCAAGTG 59.705 50.000 3.32 0.00 0.00 3.16
3378 5645 2.587522 GGTGGCCTTTTTCTCTCAAGT 58.412 47.619 3.32 0.00 0.00 3.16
3379 5646 1.889170 GGGTGGCCTTTTTCTCTCAAG 59.111 52.381 3.32 0.00 0.00 3.02
3380 5647 1.216678 TGGGTGGCCTTTTTCTCTCAA 59.783 47.619 3.32 0.00 0.00 3.02
3381 5648 0.850100 TGGGTGGCCTTTTTCTCTCA 59.150 50.000 3.32 0.00 0.00 3.27
3382 5649 1.889170 CTTGGGTGGCCTTTTTCTCTC 59.111 52.381 3.32 0.00 0.00 3.20
3383 5650 1.481242 CCTTGGGTGGCCTTTTTCTCT 60.481 52.381 3.32 0.00 0.00 3.10
3384 5651 0.969149 CCTTGGGTGGCCTTTTTCTC 59.031 55.000 3.32 0.00 0.00 2.87
3385 5652 0.560688 TCCTTGGGTGGCCTTTTTCT 59.439 50.000 3.32 0.00 0.00 2.52
3386 5653 1.344438 CTTCCTTGGGTGGCCTTTTTC 59.656 52.381 3.32 0.00 0.00 2.29
3387 5654 1.423584 CTTCCTTGGGTGGCCTTTTT 58.576 50.000 3.32 0.00 0.00 1.94
3388 5655 0.471780 CCTTCCTTGGGTGGCCTTTT 60.472 55.000 3.32 0.00 0.00 2.27
3389 5656 1.156095 CCTTCCTTGGGTGGCCTTT 59.844 57.895 3.32 0.00 0.00 3.11
3390 5657 2.854076 CCTTCCTTGGGTGGCCTT 59.146 61.111 3.32 0.00 0.00 4.35
3391 5658 3.984732 GCCTTCCTTGGGTGGCCT 61.985 66.667 3.32 0.00 37.40 5.19
3393 5660 3.607084 ATGGCCTTCCTTGGGTGGC 62.607 63.158 3.32 12.78 40.45 5.01
3394 5661 1.380380 GATGGCCTTCCTTGGGTGG 60.380 63.158 3.32 0.00 0.00 4.61
3395 5662 0.967380 GTGATGGCCTTCCTTGGGTG 60.967 60.000 15.62 0.00 0.00 4.61
3396 5663 1.384191 GTGATGGCCTTCCTTGGGT 59.616 57.895 15.62 0.00 0.00 4.51
3397 5664 1.750399 CGTGATGGCCTTCCTTGGG 60.750 63.158 15.62 0.00 0.00 4.12
3398 5665 2.409870 GCGTGATGGCCTTCCTTGG 61.410 63.158 15.62 4.03 0.00 3.61
3399 5666 3.190878 GCGTGATGGCCTTCCTTG 58.809 61.111 15.62 6.80 0.00 3.61
3407 5674 2.020131 CAGATGAAGGCGTGATGGC 58.980 57.895 0.00 0.00 45.27 4.40
3408 5675 2.020131 GCAGATGAAGGCGTGATGG 58.980 57.895 0.00 0.00 0.00 3.51
3415 5682 1.023513 AAGCTGACGCAGATGAAGGC 61.024 55.000 10.46 0.00 39.10 4.35
3416 5683 0.725686 CAAGCTGACGCAGATGAAGG 59.274 55.000 10.46 0.00 39.10 3.46
3417 5684 0.725686 CCAAGCTGACGCAGATGAAG 59.274 55.000 10.46 0.06 39.10 3.02
3418 5685 1.300971 GCCAAGCTGACGCAGATGAA 61.301 55.000 10.46 0.00 39.10 2.57
3419 5686 1.742880 GCCAAGCTGACGCAGATGA 60.743 57.895 10.46 0.00 39.10 2.92
3420 5687 2.758089 GGCCAAGCTGACGCAGATG 61.758 63.158 0.00 8.05 39.10 2.90
3421 5688 2.437359 GGCCAAGCTGACGCAGAT 60.437 61.111 0.00 1.72 39.10 2.90
3424 5691 4.617520 TTCGGCCAAGCTGACGCA 62.618 61.111 2.24 0.00 44.15 5.24
3425 5692 4.090057 GTTCGGCCAAGCTGACGC 62.090 66.667 2.24 0.00 44.15 5.19
3426 5693 1.577328 ATTGTTCGGCCAAGCTGACG 61.577 55.000 2.24 0.00 44.15 4.35
3427 5694 1.448985 TATTGTTCGGCCAAGCTGAC 58.551 50.000 2.24 0.00 44.15 3.51
3428 5695 2.288666 GATATTGTTCGGCCAAGCTGA 58.711 47.619 2.24 0.00 42.66 4.26
3429 5696 2.016318 TGATATTGTTCGGCCAAGCTG 58.984 47.619 2.24 0.00 36.06 4.24
3430 5697 2.017049 GTGATATTGTTCGGCCAAGCT 58.983 47.619 2.24 0.00 0.00 3.74
3431 5698 1.268032 CGTGATATTGTTCGGCCAAGC 60.268 52.381 2.24 0.00 0.00 4.01
3432 5699 2.006888 ACGTGATATTGTTCGGCCAAG 58.993 47.619 2.24 0.00 0.00 3.61
3433 5700 2.102070 ACGTGATATTGTTCGGCCAA 57.898 45.000 2.24 0.00 0.00 4.52
3434 5701 1.735018 CAACGTGATATTGTTCGGCCA 59.265 47.619 2.24 0.00 0.00 5.36
3435 5702 1.531058 GCAACGTGATATTGTTCGGCC 60.531 52.381 0.00 0.00 0.00 6.13
3436 5703 1.531058 GGCAACGTGATATTGTTCGGC 60.531 52.381 0.00 0.00 0.00 5.54
3437 5704 1.735018 TGGCAACGTGATATTGTTCGG 59.265 47.619 0.00 0.00 42.51 4.30
3438 5705 3.673746 ATGGCAACGTGATATTGTTCG 57.326 42.857 0.00 0.00 42.51 3.95
3452 5719 0.795698 CGATCGTTGACACATGGCAA 59.204 50.000 7.03 0.00 41.52 4.52
3453 5720 1.018752 CCGATCGTTGACACATGGCA 61.019 55.000 15.09 0.00 0.00 4.92
3454 5721 1.019278 ACCGATCGTTGACACATGGC 61.019 55.000 15.09 0.00 0.00 4.40
3455 5722 2.287393 TACCGATCGTTGACACATGG 57.713 50.000 15.09 0.00 0.00 3.66
3456 5723 3.734231 GGTATACCGATCGTTGACACATG 59.266 47.826 15.09 0.00 0.00 3.21
3457 5724 3.973657 GGTATACCGATCGTTGACACAT 58.026 45.455 15.09 0.00 0.00 3.21
3458 5725 3.425577 GGTATACCGATCGTTGACACA 57.574 47.619 15.09 0.00 0.00 3.72
3479 5746 2.434134 CCTACGTCGCAGCGTTGAC 61.434 63.158 15.93 4.74 43.04 3.18
3480 5747 2.126618 CCTACGTCGCAGCGTTGA 60.127 61.111 15.93 0.00 43.04 3.18
3481 5748 3.179265 CCCTACGTCGCAGCGTTG 61.179 66.667 15.93 11.01 43.04 4.10
3482 5749 3.677648 ACCCTACGTCGCAGCGTT 61.678 61.111 15.93 3.05 43.04 4.84
3484 5751 3.909258 AACACCCTACGTCGCAGCG 62.909 63.158 9.06 9.06 37.94 5.18
3485 5752 2.048503 AACACCCTACGTCGCAGC 60.049 61.111 0.00 0.00 0.00 5.25
3486 5753 0.038526 AAGAACACCCTACGTCGCAG 60.039 55.000 0.00 0.00 0.00 5.18
3487 5754 0.038892 GAAGAACACCCTACGTCGCA 60.039 55.000 0.00 0.00 0.00 5.10
3488 5755 0.243095 AGAAGAACACCCTACGTCGC 59.757 55.000 0.00 0.00 0.00 5.19
3489 5756 2.719426 AAGAAGAACACCCTACGTCG 57.281 50.000 0.00 0.00 0.00 5.12
3490 5757 4.812626 TGAAAAAGAAGAACACCCTACGTC 59.187 41.667 0.00 0.00 0.00 4.34
3491 5758 4.773013 TGAAAAAGAAGAACACCCTACGT 58.227 39.130 0.00 0.00 0.00 3.57
3492 5759 5.065474 TGTTGAAAAAGAAGAACACCCTACG 59.935 40.000 0.00 0.00 0.00 3.51
3493 5760 6.445357 TGTTGAAAAAGAAGAACACCCTAC 57.555 37.500 0.00 0.00 0.00 3.18
3494 5761 7.469537 TTTGTTGAAAAAGAAGAACACCCTA 57.530 32.000 0.00 0.00 0.00 3.53
3495 5762 5.993748 TTGTTGAAAAAGAAGAACACCCT 57.006 34.783 0.00 0.00 0.00 4.34
3496 5763 6.128391 GGTTTTGTTGAAAAAGAAGAACACCC 60.128 38.462 0.00 0.00 32.81 4.61
3497 5764 6.649141 AGGTTTTGTTGAAAAAGAAGAACACC 59.351 34.615 0.00 0.00 32.81 4.16
3498 5765 7.148639 GGAGGTTTTGTTGAAAAAGAAGAACAC 60.149 37.037 0.00 0.00 32.81 3.32
3499 5766 6.871492 GGAGGTTTTGTTGAAAAAGAAGAACA 59.129 34.615 0.00 0.00 32.81 3.18
3500 5767 7.063426 CAGGAGGTTTTGTTGAAAAAGAAGAAC 59.937 37.037 0.00 0.00 32.81 3.01
3501 5768 7.039363 TCAGGAGGTTTTGTTGAAAAAGAAGAA 60.039 33.333 0.00 0.00 32.81 2.52
3502 5769 6.435904 TCAGGAGGTTTTGTTGAAAAAGAAGA 59.564 34.615 0.00 0.00 32.81 2.87
3503 5770 6.630071 TCAGGAGGTTTTGTTGAAAAAGAAG 58.370 36.000 0.00 0.00 32.81 2.85
3504 5771 6.435904 TCTCAGGAGGTTTTGTTGAAAAAGAA 59.564 34.615 0.00 0.00 32.81 2.52
3505 5772 5.949354 TCTCAGGAGGTTTTGTTGAAAAAGA 59.051 36.000 0.00 0.00 32.81 2.52
3506 5773 6.207691 TCTCAGGAGGTTTTGTTGAAAAAG 57.792 37.500 0.00 0.00 32.81 2.27
3507 5774 6.207691 CTCTCAGGAGGTTTTGTTGAAAAA 57.792 37.500 0.00 0.00 36.03 1.94
3508 5775 5.835113 CTCTCAGGAGGTTTTGTTGAAAA 57.165 39.130 0.00 0.00 36.03 2.29
3521 5788 1.110442 CTGTAGTGGCCTCTCAGGAG 58.890 60.000 11.38 0.00 37.67 3.69
3522 5789 0.972983 GCTGTAGTGGCCTCTCAGGA 60.973 60.000 23.63 4.27 37.67 3.86
3523 5790 1.260538 TGCTGTAGTGGCCTCTCAGG 61.261 60.000 23.63 13.04 38.80 3.86
3524 5791 0.829333 ATGCTGTAGTGGCCTCTCAG 59.171 55.000 11.38 17.56 0.00 3.35
3525 5792 1.279496 AATGCTGTAGTGGCCTCTCA 58.721 50.000 11.38 8.47 0.00 3.27
3526 5793 3.760580 ATAATGCTGTAGTGGCCTCTC 57.239 47.619 11.38 4.09 0.00 3.20
3527 5794 5.366768 TCTTAATAATGCTGTAGTGGCCTCT 59.633 40.000 12.79 12.79 0.00 3.69
3528 5795 5.611374 TCTTAATAATGCTGTAGTGGCCTC 58.389 41.667 3.32 0.00 0.00 4.70
3529 5796 5.630415 TCTTAATAATGCTGTAGTGGCCT 57.370 39.130 3.32 0.00 0.00 5.19
3530 5797 6.693315 TTTCTTAATAATGCTGTAGTGGCC 57.307 37.500 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.