Multiple sequence alignment - TraesCS5D01G444600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G444600 chr5D 100.000 2469 0 0 1 2469 495475878 495478346 0.000000e+00 4560.0
1 TraesCS5D01G444600 chr5D 99.763 422 1 0 2048 2469 14016514 14016093 0.000000e+00 774.0
2 TraesCS5D01G444600 chr5D 99.068 429 3 1 2041 2469 120822718 120822291 0.000000e+00 769.0
3 TraesCS5D01G444600 chr6D 96.276 1799 41 18 275 2049 110324319 110322523 0.000000e+00 2928.0
4 TraesCS5D01G444600 chr6D 95.482 1793 48 13 275 2043 80068487 80070270 0.000000e+00 2832.0
5 TraesCS5D01G444600 chr6D 85.155 485 64 8 325 807 454991303 454990825 7.930000e-135 490.0
6 TraesCS5D01G444600 chr6D 97.143 35 1 0 9 43 466193130 466193164 2.650000e-05 60.2
7 TraesCS5D01G444600 chr3D 96.329 1798 37 16 275 2049 46539809 46541600 0.000000e+00 2928.0
8 TraesCS5D01G444600 chr3D 91.225 1641 77 25 333 1919 585903803 585902176 0.000000e+00 2170.0
9 TraesCS5D01G444600 chr3D 99.527 423 2 0 2047 2469 505008445 505008023 0.000000e+00 771.0
10 TraesCS5D01G444600 chr3D 96.947 131 4 0 1919 2049 585902145 585902015 1.150000e-53 220.0
11 TraesCS5D01G444600 chr3D 97.143 35 1 0 9 43 603127444 603127410 2.650000e-05 60.2
12 TraesCS5D01G444600 chr1D 93.216 1754 85 24 324 2049 467457299 467455552 0.000000e+00 2549.0
13 TraesCS5D01G444600 chr1D 90.304 1021 45 22 929 1919 122263780 122262784 0.000000e+00 1288.0
14 TraesCS5D01G444600 chr1D 99.528 424 2 0 2046 2469 424977114 424977537 0.000000e+00 773.0
15 TraesCS5D01G444600 chr1D 95.420 131 6 0 1919 2049 122262753 122262623 2.490000e-50 209.0
16 TraesCS5D01G444600 chr5A 94.740 1521 53 18 422 1919 426307127 426305611 0.000000e+00 2340.0
17 TraesCS5D01G444600 chr5A 97.710 131 3 0 1919 2049 426305580 426305450 2.470000e-55 226.0
18 TraesCS5D01G444600 chr5A 96.000 50 2 0 1025 1074 426306289 426306240 5.660000e-12 82.4
19 TraesCS5D01G444600 chr7D 92.593 1620 76 22 327 1919 602775777 602777379 0.000000e+00 2287.0
20 TraesCS5D01G444600 chr7D 93.333 1140 40 11 805 1919 590072350 590071222 0.000000e+00 1652.0
21 TraesCS5D01G444600 chr7D 99.764 424 1 0 2046 2469 524727396 524726973 0.000000e+00 778.0
22 TraesCS5D01G444600 chr7D 99.763 422 1 0 2048 2469 266938310 266937889 0.000000e+00 774.0
23 TraesCS5D01G444600 chr7D 97.710 131 3 0 1919 2049 602777410 602777540 2.470000e-55 226.0
24 TraesCS5D01G444600 chr7D 96.947 131 4 0 1919 2049 590071191 590071061 1.150000e-53 220.0
25 TraesCS5D01G444600 chr2D 96.486 626 20 2 275 899 590221072 590221696 0.000000e+00 1033.0
26 TraesCS5D01G444600 chr2D 95.620 274 11 1 274 547 59643752 59644024 2.920000e-119 438.0
27 TraesCS5D01G444600 chr2D 95.349 43 2 0 1 43 512839385 512839427 4.410000e-08 69.4
28 TraesCS5D01G444600 chrUn 99.763 422 1 0 2048 2469 22450766 22451187 0.000000e+00 774.0
29 TraesCS5D01G444600 chrUn 90.698 43 4 0 1 43 476985251 476985293 9.540000e-05 58.4
30 TraesCS5D01G444600 chr4D 99.763 422 1 0 2048 2469 433948747 433948326 0.000000e+00 774.0
31 TraesCS5D01G444600 chr4D 99.299 428 2 1 2042 2469 203686124 203686550 0.000000e+00 773.0
32 TraesCS5D01G444600 chr4D 87.147 389 29 10 1533 1919 417406544 417406913 2.940000e-114 422.0
33 TraesCS5D01G444600 chr4D 97.143 35 1 0 9 43 480844456 480844422 2.650000e-05 60.2
34 TraesCS5D01G444600 chr2B 96.721 61 2 0 971 1031 67279129 67279189 4.340000e-18 102.0
35 TraesCS5D01G444600 chr4B 97.619 42 1 0 1 42 242709202 242709161 3.410000e-09 73.1
36 TraesCS5D01G444600 chr3A 97.297 37 1 0 6 42 31731429 31731465 2.050000e-06 63.9
37 TraesCS5D01G444600 chr7B 90.698 43 4 0 1 43 503379707 503379749 9.540000e-05 58.4
38 TraesCS5D01G444600 chr7B 90.698 43 4 0 1 43 503410661 503410703 9.540000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G444600 chr5D 495475878 495478346 2468 False 4560.0 4560 100.0000 1 2469 1 chr5D.!!$F1 2468
1 TraesCS5D01G444600 chr6D 110322523 110324319 1796 True 2928.0 2928 96.2760 275 2049 1 chr6D.!!$R1 1774
2 TraesCS5D01G444600 chr6D 80068487 80070270 1783 False 2832.0 2832 95.4820 275 2043 1 chr6D.!!$F1 1768
3 TraesCS5D01G444600 chr3D 46539809 46541600 1791 False 2928.0 2928 96.3290 275 2049 1 chr3D.!!$F1 1774
4 TraesCS5D01G444600 chr3D 585902015 585903803 1788 True 1195.0 2170 94.0860 333 2049 2 chr3D.!!$R3 1716
5 TraesCS5D01G444600 chr1D 467455552 467457299 1747 True 2549.0 2549 93.2160 324 2049 1 chr1D.!!$R1 1725
6 TraesCS5D01G444600 chr1D 122262623 122263780 1157 True 748.5 1288 92.8620 929 2049 2 chr1D.!!$R2 1120
7 TraesCS5D01G444600 chr5A 426305450 426307127 1677 True 882.8 2340 96.1500 422 2049 3 chr5A.!!$R1 1627
8 TraesCS5D01G444600 chr7D 602775777 602777540 1763 False 1256.5 2287 95.1515 327 2049 2 chr7D.!!$F1 1722
9 TraesCS5D01G444600 chr7D 590071061 590072350 1289 True 936.0 1652 95.1400 805 2049 2 chr7D.!!$R3 1244
10 TraesCS5D01G444600 chr2D 590221072 590221696 624 False 1033.0 1033 96.4860 275 899 1 chr2D.!!$F3 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.036010 CTTGAGCCGGTGGACATTCT 60.036 55.0 1.9 0.0 0.0 2.40 F
64 65 0.321564 TGAGCCGGTGGACATTCTTG 60.322 55.0 1.9 0.0 0.0 3.02 F
70 71 0.893727 GGTGGACATTCTTGCCGGTT 60.894 55.0 1.9 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1426 1486 2.522836 AGACCGAATCTAGCAGCATG 57.477 50.000 0.0 0.0 35.15 4.06 R
1428 1488 3.384789 ACAATAGACCGAATCTAGCAGCA 59.615 43.478 0.0 0.0 43.35 4.41 R
2049 2181 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.0 0.0 34.75 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.210961 GTACCGCCAGAAGAAATAGCC 58.789 52.381 0.00 0.00 0.00 3.93
21 22 0.107165 ACCGCCAGAAGAAATAGCCC 60.107 55.000 0.00 0.00 0.00 5.19
22 23 0.819666 CCGCCAGAAGAAATAGCCCC 60.820 60.000 0.00 0.00 0.00 5.80
23 24 0.181350 CGCCAGAAGAAATAGCCCCT 59.819 55.000 0.00 0.00 0.00 4.79
24 25 1.408822 CGCCAGAAGAAATAGCCCCTT 60.409 52.381 0.00 0.00 0.00 3.95
25 26 2.739943 GCCAGAAGAAATAGCCCCTTT 58.260 47.619 0.00 0.00 0.00 3.11
26 27 3.684413 CGCCAGAAGAAATAGCCCCTTTA 60.684 47.826 0.00 0.00 0.00 1.85
27 28 4.474394 GCCAGAAGAAATAGCCCCTTTAT 58.526 43.478 0.00 0.00 0.00 1.40
28 29 4.895889 GCCAGAAGAAATAGCCCCTTTATT 59.104 41.667 0.00 0.00 0.00 1.40
29 30 6.068670 GCCAGAAGAAATAGCCCCTTTATTA 58.931 40.000 0.00 0.00 0.00 0.98
30 31 6.721668 GCCAGAAGAAATAGCCCCTTTATTAT 59.278 38.462 0.00 0.00 0.00 1.28
31 32 7.233553 GCCAGAAGAAATAGCCCCTTTATTATT 59.766 37.037 0.00 0.00 0.00 1.40
32 33 9.807921 CCAGAAGAAATAGCCCCTTTATTATTA 57.192 33.333 0.00 0.00 0.00 0.98
35 36 9.809395 GAAGAAATAGCCCCTTTATTATTAGGT 57.191 33.333 0.00 0.00 0.00 3.08
40 41 9.854303 AATAGCCCCTTTATTATTAGGTAGAGA 57.146 33.333 0.00 0.00 0.00 3.10
43 44 9.269494 AGCCCCTTTATTATTAGGTAGAGATAC 57.731 37.037 0.00 0.00 0.00 2.24
44 45 9.269494 GCCCCTTTATTATTAGGTAGAGATACT 57.731 37.037 0.00 0.00 0.00 2.12
51 52 5.968528 ATTAGGTAGAGATACTTGAGCCG 57.031 43.478 0.00 0.00 0.00 5.52
52 53 2.588620 AGGTAGAGATACTTGAGCCGG 58.411 52.381 0.00 0.00 0.00 6.13
53 54 2.091775 AGGTAGAGATACTTGAGCCGGT 60.092 50.000 1.90 0.00 0.00 5.28
54 55 2.034812 GGTAGAGATACTTGAGCCGGTG 59.965 54.545 1.90 0.00 0.00 4.94
55 56 1.115467 AGAGATACTTGAGCCGGTGG 58.885 55.000 1.90 0.00 0.00 4.61
56 57 1.112113 GAGATACTTGAGCCGGTGGA 58.888 55.000 1.90 0.00 0.00 4.02
57 58 0.824759 AGATACTTGAGCCGGTGGAC 59.175 55.000 1.90 0.00 0.00 4.02
58 59 0.535335 GATACTTGAGCCGGTGGACA 59.465 55.000 1.90 0.00 0.00 4.02
59 60 1.139058 GATACTTGAGCCGGTGGACAT 59.861 52.381 1.90 0.00 0.00 3.06
60 61 0.981183 TACTTGAGCCGGTGGACATT 59.019 50.000 1.90 0.00 0.00 2.71
61 62 0.321653 ACTTGAGCCGGTGGACATTC 60.322 55.000 1.90 0.00 0.00 2.67
62 63 0.036010 CTTGAGCCGGTGGACATTCT 60.036 55.000 1.90 0.00 0.00 2.40
63 64 0.400213 TTGAGCCGGTGGACATTCTT 59.600 50.000 1.90 0.00 0.00 2.52
64 65 0.321564 TGAGCCGGTGGACATTCTTG 60.322 55.000 1.90 0.00 0.00 3.02
65 66 1.648467 GAGCCGGTGGACATTCTTGC 61.648 60.000 1.90 0.00 0.00 4.01
66 67 2.700773 GCCGGTGGACATTCTTGCC 61.701 63.158 1.90 0.00 0.00 4.52
67 68 2.398554 CCGGTGGACATTCTTGCCG 61.399 63.158 0.00 0.00 38.99 5.69
68 69 2.398554 CGGTGGACATTCTTGCCGG 61.399 63.158 0.00 0.00 36.05 6.13
69 70 1.303317 GGTGGACATTCTTGCCGGT 60.303 57.895 1.90 0.00 0.00 5.28
70 71 0.893727 GGTGGACATTCTTGCCGGTT 60.894 55.000 1.90 0.00 0.00 4.44
71 72 0.958822 GTGGACATTCTTGCCGGTTT 59.041 50.000 1.90 0.00 0.00 3.27
72 73 2.156098 GTGGACATTCTTGCCGGTTTA 58.844 47.619 1.90 0.00 0.00 2.01
73 74 2.554893 GTGGACATTCTTGCCGGTTTAA 59.445 45.455 1.90 0.00 0.00 1.52
74 75 3.004944 GTGGACATTCTTGCCGGTTTAAA 59.995 43.478 1.90 0.00 0.00 1.52
75 76 3.004944 TGGACATTCTTGCCGGTTTAAAC 59.995 43.478 9.98 9.98 0.00 2.01
76 77 3.004944 GGACATTCTTGCCGGTTTAAACA 59.995 43.478 19.57 0.00 0.00 2.83
77 78 4.500035 GGACATTCTTGCCGGTTTAAACAA 60.500 41.667 19.57 4.92 0.00 2.83
78 79 4.616953 ACATTCTTGCCGGTTTAAACAAG 58.383 39.130 19.57 13.72 40.66 3.16
79 80 4.339814 ACATTCTTGCCGGTTTAAACAAGA 59.660 37.500 19.57 15.59 44.95 3.02
80 81 3.974871 TCTTGCCGGTTTAAACAAGAC 57.025 42.857 19.57 6.55 42.56 3.01
81 82 2.288458 TCTTGCCGGTTTAAACAAGACG 59.712 45.455 19.57 13.01 42.56 4.18
82 83 1.950828 TGCCGGTTTAAACAAGACGA 58.049 45.000 19.57 0.00 0.00 4.20
83 84 2.496111 TGCCGGTTTAAACAAGACGAT 58.504 42.857 19.57 0.00 0.00 3.73
84 85 2.224549 TGCCGGTTTAAACAAGACGATG 59.775 45.455 19.57 4.21 0.00 3.84
85 86 2.481185 GCCGGTTTAAACAAGACGATGA 59.519 45.455 19.57 0.00 0.00 2.92
86 87 3.126343 GCCGGTTTAAACAAGACGATGAT 59.874 43.478 19.57 0.00 0.00 2.45
87 88 4.647964 CCGGTTTAAACAAGACGATGATG 58.352 43.478 19.57 0.00 0.00 3.07
88 89 4.390603 CCGGTTTAAACAAGACGATGATGA 59.609 41.667 19.57 0.00 0.00 2.92
89 90 5.313623 CGGTTTAAACAAGACGATGATGAC 58.686 41.667 19.57 0.00 0.00 3.06
90 91 5.120208 CGGTTTAAACAAGACGATGATGACT 59.880 40.000 19.57 0.00 0.00 3.41
91 92 6.534934 GGTTTAAACAAGACGATGATGACTC 58.465 40.000 19.57 0.00 0.00 3.36
92 93 6.147164 GGTTTAAACAAGACGATGATGACTCA 59.853 38.462 19.57 0.00 35.41 3.41
93 94 6.951256 TTAAACAAGACGATGATGACTCAG 57.049 37.500 0.00 0.00 34.12 3.35
94 95 4.527509 AACAAGACGATGATGACTCAGT 57.472 40.909 0.00 0.00 34.12 3.41
95 96 5.644977 AACAAGACGATGATGACTCAGTA 57.355 39.130 0.00 0.00 34.12 2.74
96 97 5.843673 ACAAGACGATGATGACTCAGTAT 57.156 39.130 0.00 0.00 34.12 2.12
97 98 5.586339 ACAAGACGATGATGACTCAGTATG 58.414 41.667 0.00 0.00 34.12 2.39
98 99 4.235939 AGACGATGATGACTCAGTATGC 57.764 45.455 0.00 0.00 34.12 3.14
99 100 3.633986 AGACGATGATGACTCAGTATGCA 59.366 43.478 0.00 0.00 34.12 3.96
100 101 4.098501 AGACGATGATGACTCAGTATGCAA 59.901 41.667 0.00 0.00 34.12 4.08
101 102 4.953667 ACGATGATGACTCAGTATGCAAT 58.046 39.130 0.00 0.00 34.12 3.56
102 103 6.015940 AGACGATGATGACTCAGTATGCAATA 60.016 38.462 0.00 0.00 34.12 1.90
103 104 6.515832 ACGATGATGACTCAGTATGCAATAA 58.484 36.000 0.00 0.00 34.12 1.40
104 105 7.157347 ACGATGATGACTCAGTATGCAATAAT 58.843 34.615 0.00 0.00 34.12 1.28
105 106 7.658982 ACGATGATGACTCAGTATGCAATAATT 59.341 33.333 0.00 0.00 34.12 1.40
106 107 8.167345 CGATGATGACTCAGTATGCAATAATTC 58.833 37.037 0.00 0.00 34.12 2.17
107 108 8.913487 ATGATGACTCAGTATGCAATAATTCA 57.087 30.769 0.00 0.00 34.12 2.57
108 109 8.735692 TGATGACTCAGTATGCAATAATTCAA 57.264 30.769 0.00 0.00 34.76 2.69
109 110 8.615211 TGATGACTCAGTATGCAATAATTCAAC 58.385 33.333 0.00 0.00 34.76 3.18
110 111 7.320443 TGACTCAGTATGCAATAATTCAACC 57.680 36.000 0.00 0.00 34.76 3.77
111 112 6.883756 TGACTCAGTATGCAATAATTCAACCA 59.116 34.615 0.00 0.00 34.76 3.67
112 113 7.557358 TGACTCAGTATGCAATAATTCAACCAT 59.443 33.333 0.00 0.00 34.76 3.55
113 114 7.934457 ACTCAGTATGCAATAATTCAACCATC 58.066 34.615 0.00 0.00 34.76 3.51
114 115 7.776969 ACTCAGTATGCAATAATTCAACCATCT 59.223 33.333 0.00 0.00 34.76 2.90
115 116 8.523915 TCAGTATGCAATAATTCAACCATCTT 57.476 30.769 0.00 0.00 34.76 2.40
116 117 9.625747 TCAGTATGCAATAATTCAACCATCTTA 57.374 29.630 0.00 0.00 34.76 2.10
117 118 9.669353 CAGTATGCAATAATTCAACCATCTTAC 57.331 33.333 0.00 0.00 0.00 2.34
118 119 9.632638 AGTATGCAATAATTCAACCATCTTACT 57.367 29.630 0.00 0.00 0.00 2.24
119 120 9.884465 GTATGCAATAATTCAACCATCTTACTC 57.116 33.333 0.00 0.00 0.00 2.59
120 121 8.757982 ATGCAATAATTCAACCATCTTACTCT 57.242 30.769 0.00 0.00 0.00 3.24
121 122 8.213518 TGCAATAATTCAACCATCTTACTCTC 57.786 34.615 0.00 0.00 0.00 3.20
122 123 7.828717 TGCAATAATTCAACCATCTTACTCTCA 59.171 33.333 0.00 0.00 0.00 3.27
123 124 8.677300 GCAATAATTCAACCATCTTACTCTCAA 58.323 33.333 0.00 0.00 0.00 3.02
128 129 9.965902 AATTCAACCATCTTACTCTCAATAGTT 57.034 29.630 0.00 0.00 0.00 2.24
196 197 7.264373 ACTCTGGTTATTGTCTTTTGAGTTG 57.736 36.000 0.00 0.00 0.00 3.16
197 198 6.263168 ACTCTGGTTATTGTCTTTTGAGTTGG 59.737 38.462 0.00 0.00 0.00 3.77
198 199 6.361433 TCTGGTTATTGTCTTTTGAGTTGGA 58.639 36.000 0.00 0.00 0.00 3.53
199 200 6.831353 TCTGGTTATTGTCTTTTGAGTTGGAA 59.169 34.615 0.00 0.00 0.00 3.53
200 201 7.505585 TCTGGTTATTGTCTTTTGAGTTGGAAT 59.494 33.333 0.00 0.00 0.00 3.01
201 202 7.432869 TGGTTATTGTCTTTTGAGTTGGAATG 58.567 34.615 0.00 0.00 0.00 2.67
202 203 7.069331 TGGTTATTGTCTTTTGAGTTGGAATGT 59.931 33.333 0.00 0.00 0.00 2.71
203 204 8.573035 GGTTATTGTCTTTTGAGTTGGAATGTA 58.427 33.333 0.00 0.00 0.00 2.29
207 208 8.918202 TTGTCTTTTGAGTTGGAATGTATACT 57.082 30.769 4.17 0.00 0.00 2.12
208 209 8.547967 TGTCTTTTGAGTTGGAATGTATACTC 57.452 34.615 4.17 0.00 37.97 2.59
209 210 8.375506 TGTCTTTTGAGTTGGAATGTATACTCT 58.624 33.333 4.17 0.00 38.23 3.24
210 211 8.660373 GTCTTTTGAGTTGGAATGTATACTCTG 58.340 37.037 4.17 0.00 38.23 3.35
211 212 7.824289 TCTTTTGAGTTGGAATGTATACTCTGG 59.176 37.037 4.17 0.00 38.23 3.86
212 213 6.620877 TTGAGTTGGAATGTATACTCTGGT 57.379 37.500 4.17 0.00 38.23 4.00
213 214 6.620877 TGAGTTGGAATGTATACTCTGGTT 57.379 37.500 4.17 0.00 38.23 3.67
214 215 7.016153 TGAGTTGGAATGTATACTCTGGTTT 57.984 36.000 4.17 0.00 38.23 3.27
215 216 6.878923 TGAGTTGGAATGTATACTCTGGTTTG 59.121 38.462 4.17 0.00 38.23 2.93
216 217 6.180472 AGTTGGAATGTATACTCTGGTTTGG 58.820 40.000 4.17 0.00 0.00 3.28
217 218 5.110814 TGGAATGTATACTCTGGTTTGGG 57.889 43.478 4.17 0.00 0.00 4.12
218 219 4.538490 TGGAATGTATACTCTGGTTTGGGT 59.462 41.667 4.17 0.00 0.00 4.51
219 220 4.881850 GGAATGTATACTCTGGTTTGGGTG 59.118 45.833 4.17 0.00 0.00 4.61
220 221 5.497474 GAATGTATACTCTGGTTTGGGTGT 58.503 41.667 4.17 0.00 0.00 4.16
221 222 4.280436 TGTATACTCTGGTTTGGGTGTG 57.720 45.455 4.17 0.00 0.00 3.82
222 223 3.904965 TGTATACTCTGGTTTGGGTGTGA 59.095 43.478 4.17 0.00 0.00 3.58
223 224 4.534500 TGTATACTCTGGTTTGGGTGTGAT 59.466 41.667 4.17 0.00 0.00 3.06
224 225 4.657814 ATACTCTGGTTTGGGTGTGATT 57.342 40.909 0.00 0.00 0.00 2.57
225 226 5.772393 ATACTCTGGTTTGGGTGTGATTA 57.228 39.130 0.00 0.00 0.00 1.75
226 227 4.447138 ACTCTGGTTTGGGTGTGATTAA 57.553 40.909 0.00 0.00 0.00 1.40
227 228 4.142038 ACTCTGGTTTGGGTGTGATTAAC 58.858 43.478 0.00 0.00 0.00 2.01
228 229 4.141287 CTCTGGTTTGGGTGTGATTAACA 58.859 43.478 0.00 0.00 36.04 2.41
229 230 4.735369 TCTGGTTTGGGTGTGATTAACAT 58.265 39.130 0.00 0.00 41.97 2.71
230 231 5.882040 TCTGGTTTGGGTGTGATTAACATA 58.118 37.500 0.00 0.00 41.97 2.29
231 232 6.307776 TCTGGTTTGGGTGTGATTAACATAA 58.692 36.000 0.00 0.00 41.97 1.90
232 233 6.207810 TCTGGTTTGGGTGTGATTAACATAAC 59.792 38.462 0.00 0.00 41.97 1.89
233 234 5.833667 TGGTTTGGGTGTGATTAACATAACA 59.166 36.000 0.00 0.00 41.97 2.41
234 235 6.323996 TGGTTTGGGTGTGATTAACATAACAA 59.676 34.615 0.00 0.00 41.97 2.83
235 236 7.147724 TGGTTTGGGTGTGATTAACATAACAAA 60.148 33.333 0.00 0.00 41.97 2.83
236 237 7.875554 GGTTTGGGTGTGATTAACATAACAAAT 59.124 33.333 0.00 0.00 41.97 2.32
237 238 8.707839 GTTTGGGTGTGATTAACATAACAAATG 58.292 33.333 0.00 0.00 41.97 2.32
238 239 6.929625 TGGGTGTGATTAACATAACAAATGG 58.070 36.000 0.00 0.00 41.97 3.16
239 240 6.721668 TGGGTGTGATTAACATAACAAATGGA 59.278 34.615 0.00 0.00 41.97 3.41
240 241 7.233553 TGGGTGTGATTAACATAACAAATGGAA 59.766 33.333 0.00 0.00 41.97 3.53
241 242 8.091449 GGGTGTGATTAACATAACAAATGGAAA 58.909 33.333 0.00 0.00 41.97 3.13
242 243 8.921670 GGTGTGATTAACATAACAAATGGAAAC 58.078 33.333 0.00 0.00 41.97 2.78
243 244 8.921670 GTGTGATTAACATAACAAATGGAAACC 58.078 33.333 0.00 0.00 41.97 3.27
244 245 8.642432 TGTGATTAACATAACAAATGGAAACCA 58.358 29.630 0.00 0.00 33.42 3.67
245 246 9.482627 GTGATTAACATAACAAATGGAAACCAA 57.517 29.630 0.00 0.00 36.95 3.67
246 247 9.703892 TGATTAACATAACAAATGGAAACCAAG 57.296 29.630 0.00 0.00 36.95 3.61
247 248 9.150348 GATTAACATAACAAATGGAAACCAAGG 57.850 33.333 0.00 0.00 36.95 3.61
248 249 6.493189 AACATAACAAATGGAAACCAAGGT 57.507 33.333 0.00 0.00 36.95 3.50
249 250 5.852827 ACATAACAAATGGAAACCAAGGTG 58.147 37.500 0.00 0.00 36.95 4.00
250 251 5.365314 ACATAACAAATGGAAACCAAGGTGT 59.635 36.000 0.00 0.00 36.95 4.16
251 252 4.835284 AACAAATGGAAACCAAGGTGTT 57.165 36.364 0.00 0.00 36.95 3.32
252 253 4.835284 ACAAATGGAAACCAAGGTGTTT 57.165 36.364 0.00 0.00 40.99 2.83
261 262 6.445357 GAAACCAAGGTGTTTCTTACAGAA 57.555 37.500 8.89 0.00 46.72 3.02
262 263 6.844097 AAACCAAGGTGTTTCTTACAGAAA 57.156 33.333 0.00 0.00 41.51 2.52
374 376 1.876416 CGTTCTGGACCGTTGGATGTT 60.876 52.381 0.00 0.00 0.00 2.71
493 496 2.609350 CAAGGGCATTTCCGTCATTTG 58.391 47.619 0.00 0.00 34.94 2.32
664 667 2.759973 CCTAGCCGCCACTCCTCA 60.760 66.667 0.00 0.00 0.00 3.86
675 678 1.229625 ACTCCTCACTGGCCATCCA 60.230 57.895 5.51 0.00 40.85 3.41
1239 1287 2.031437 GTCTCTGATTTTGCTGCGGATC 59.969 50.000 0.00 0.00 0.00 3.36
1373 1425 3.845781 TGTGCTTCTCTTCTTTCCAGT 57.154 42.857 0.00 0.00 0.00 4.00
1529 1596 7.070821 GTGGTGTCCTATCTTCCTTAATTCCTA 59.929 40.741 0.00 0.00 0.00 2.94
2004 2136 3.281727 TCTGTGCTTCTTGGTTTGTCT 57.718 42.857 0.00 0.00 0.00 3.41
2010 2142 5.057149 GTGCTTCTTGGTTTGTCTAGAGAA 58.943 41.667 0.00 0.00 0.00 2.87
2049 2181 4.816925 GTCAGTTCACCTCTGTAGCTTTTT 59.183 41.667 0.00 0.00 34.86 1.94
2050 2182 4.816385 TCAGTTCACCTCTGTAGCTTTTTG 59.184 41.667 0.00 0.00 34.86 2.44
2051 2183 4.816385 CAGTTCACCTCTGTAGCTTTTTGA 59.184 41.667 0.00 0.00 0.00 2.69
2052 2184 5.296780 CAGTTCACCTCTGTAGCTTTTTGAA 59.703 40.000 0.00 0.00 0.00 2.69
2053 2185 5.529060 AGTTCACCTCTGTAGCTTTTTGAAG 59.471 40.000 0.00 0.00 0.00 3.02
2054 2186 4.389374 TCACCTCTGTAGCTTTTTGAAGG 58.611 43.478 0.00 0.00 0.00 3.46
2055 2187 4.102524 TCACCTCTGTAGCTTTTTGAAGGA 59.897 41.667 0.00 0.00 0.00 3.36
2056 2188 4.821805 CACCTCTGTAGCTTTTTGAAGGAA 59.178 41.667 0.00 0.00 0.00 3.36
2057 2189 5.299279 CACCTCTGTAGCTTTTTGAAGGAAA 59.701 40.000 0.00 0.00 0.00 3.13
2058 2190 6.015940 CACCTCTGTAGCTTTTTGAAGGAAAT 60.016 38.462 0.00 0.00 0.00 2.17
2059 2191 7.174946 CACCTCTGTAGCTTTTTGAAGGAAATA 59.825 37.037 0.00 0.00 0.00 1.40
2060 2192 7.890655 ACCTCTGTAGCTTTTTGAAGGAAATAT 59.109 33.333 0.00 0.00 0.00 1.28
2061 2193 8.186821 CCTCTGTAGCTTTTTGAAGGAAATATG 58.813 37.037 0.00 0.00 0.00 1.78
2062 2194 7.538575 TCTGTAGCTTTTTGAAGGAAATATGC 58.461 34.615 0.00 0.00 0.00 3.14
2063 2195 6.630071 TGTAGCTTTTTGAAGGAAATATGCC 58.370 36.000 0.00 0.00 0.00 4.40
2064 2196 5.089970 AGCTTTTTGAAGGAAATATGCCC 57.910 39.130 0.00 0.00 0.00 5.36
2065 2197 4.779489 AGCTTTTTGAAGGAAATATGCCCT 59.221 37.500 0.00 0.00 0.00 5.19
2066 2198 5.957774 AGCTTTTTGAAGGAAATATGCCCTA 59.042 36.000 0.00 0.00 31.36 3.53
2067 2199 6.097412 AGCTTTTTGAAGGAAATATGCCCTAG 59.903 38.462 0.00 0.00 31.36 3.02
2068 2200 6.096846 GCTTTTTGAAGGAAATATGCCCTAGA 59.903 38.462 0.00 0.00 31.36 2.43
2069 2201 7.645058 TTTTTGAAGGAAATATGCCCTAGAG 57.355 36.000 0.00 0.00 31.36 2.43
2070 2202 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
2144 2276 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
2145 2277 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
2146 2278 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
2147 2279 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
2148 2280 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
2149 2281 6.879993 TGCTAGAATTGTATTAACCGGAAACA 59.120 34.615 9.46 1.34 0.00 2.83
2150 2282 7.554835 TGCTAGAATTGTATTAACCGGAAACAT 59.445 33.333 9.46 0.00 0.00 2.71
2151 2283 9.048446 GCTAGAATTGTATTAACCGGAAACATA 57.952 33.333 9.46 0.00 0.00 2.29
2159 2291 9.616156 TGTATTAACCGGAAACATAATACATGT 57.384 29.630 22.31 2.69 42.13 3.21
2160 2292 9.872757 GTATTAACCGGAAACATAATACATGTG 57.127 33.333 9.46 0.00 39.40 3.21
2161 2293 7.925043 TTAACCGGAAACATAATACATGTGT 57.075 32.000 9.46 0.00 31.80 3.72
2162 2294 5.811399 ACCGGAAACATAATACATGTGTG 57.189 39.130 9.46 4.81 31.80 3.82
2163 2295 5.492895 ACCGGAAACATAATACATGTGTGA 58.507 37.500 9.46 0.00 31.80 3.58
2164 2296 5.941058 ACCGGAAACATAATACATGTGTGAA 59.059 36.000 9.46 0.00 31.80 3.18
2165 2297 6.601613 ACCGGAAACATAATACATGTGTGAAT 59.398 34.615 9.46 0.00 31.80 2.57
2166 2298 7.771361 ACCGGAAACATAATACATGTGTGAATA 59.229 33.333 9.46 0.00 31.80 1.75
2167 2299 8.783093 CCGGAAACATAATACATGTGTGAATAT 58.217 33.333 9.11 0.00 31.80 1.28
2183 2315 9.586435 TGTGTGAATATATAGACAAACAGAGTG 57.414 33.333 9.49 0.00 0.00 3.51
2184 2316 9.587772 GTGTGAATATATAGACAAACAGAGTGT 57.412 33.333 7.14 0.00 0.00 3.55
2185 2317 9.803315 TGTGAATATATAGACAAACAGAGTGTC 57.197 33.333 0.00 0.00 44.75 3.67
2186 2318 9.803315 GTGAATATATAGACAAACAGAGTGTCA 57.197 33.333 7.26 0.00 46.44 3.58
2187 2319 9.803315 TGAATATATAGACAAACAGAGTGTCAC 57.197 33.333 7.26 0.00 46.44 3.67
2191 2323 6.902771 ATAGACAAACAGAGTGTCACTAGT 57.097 37.500 5.21 5.11 46.44 2.57
2192 2324 7.997773 ATAGACAAACAGAGTGTCACTAGTA 57.002 36.000 5.21 0.00 46.44 1.82
2193 2325 6.902771 AGACAAACAGAGTGTCACTAGTAT 57.097 37.500 5.21 0.00 46.44 2.12
2194 2326 6.682746 AGACAAACAGAGTGTCACTAGTATG 58.317 40.000 5.21 5.56 46.44 2.39
2195 2327 5.230942 ACAAACAGAGTGTCACTAGTATGC 58.769 41.667 5.21 0.00 0.00 3.14
2196 2328 4.457834 AACAGAGTGTCACTAGTATGCC 57.542 45.455 5.21 0.00 0.00 4.40
2197 2329 3.702792 ACAGAGTGTCACTAGTATGCCT 58.297 45.455 5.21 0.00 0.00 4.75
2198 2330 3.697045 ACAGAGTGTCACTAGTATGCCTC 59.303 47.826 5.21 0.00 0.00 4.70
2199 2331 3.951037 CAGAGTGTCACTAGTATGCCTCT 59.049 47.826 5.21 1.89 0.00 3.69
2200 2332 5.126779 CAGAGTGTCACTAGTATGCCTCTA 58.873 45.833 5.21 0.00 0.00 2.43
2201 2333 5.008217 CAGAGTGTCACTAGTATGCCTCTAC 59.992 48.000 5.21 0.00 0.00 2.59
2202 2334 5.104277 AGAGTGTCACTAGTATGCCTCTACT 60.104 44.000 5.21 0.00 36.04 2.57
2203 2335 5.511363 AGTGTCACTAGTATGCCTCTACTT 58.489 41.667 2.87 0.00 33.96 2.24
2204 2336 5.358442 AGTGTCACTAGTATGCCTCTACTTG 59.642 44.000 2.87 0.00 33.96 3.16
2205 2337 5.357314 GTGTCACTAGTATGCCTCTACTTGA 59.643 44.000 0.00 0.18 33.96 3.02
2206 2338 5.357314 TGTCACTAGTATGCCTCTACTTGAC 59.643 44.000 0.00 11.98 38.64 3.18
2207 2339 5.591067 GTCACTAGTATGCCTCTACTTGACT 59.409 44.000 0.00 0.00 36.95 3.41
2208 2340 6.766944 GTCACTAGTATGCCTCTACTTGACTA 59.233 42.308 0.00 0.00 36.95 2.59
2209 2341 6.993308 TCACTAGTATGCCTCTACTTGACTAG 59.007 42.308 0.00 0.00 40.35 2.57
2210 2342 5.766174 ACTAGTATGCCTCTACTTGACTAGC 59.234 44.000 0.00 0.00 38.86 3.42
2211 2343 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
2212 2344 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
2213 2345 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
2214 2346 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
2215 2347 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
2216 2348 3.626670 GCCTCTACTTGACTAGCTCGTTA 59.373 47.826 0.00 0.00 0.00 3.18
2217 2349 4.096081 GCCTCTACTTGACTAGCTCGTTAA 59.904 45.833 0.00 0.00 0.00 2.01
2218 2350 5.221087 GCCTCTACTTGACTAGCTCGTTAAT 60.221 44.000 0.00 0.00 0.00 1.40
2219 2351 6.432107 CCTCTACTTGACTAGCTCGTTAATC 58.568 44.000 0.00 0.00 0.00 1.75
2220 2352 6.038382 CCTCTACTTGACTAGCTCGTTAATCA 59.962 42.308 0.00 0.00 0.00 2.57
2221 2353 7.387119 TCTACTTGACTAGCTCGTTAATCAA 57.613 36.000 0.00 0.00 0.00 2.57
2222 2354 7.823665 TCTACTTGACTAGCTCGTTAATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
2223 2355 6.952935 ACTTGACTAGCTCGTTAATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
2224 2356 6.688578 ACTTGACTAGCTCGTTAATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
2225 2357 7.324178 ACTTGACTAGCTCGTTAATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
2226 2358 7.276658 ACTTGACTAGCTCGTTAATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
2227 2359 6.042777 TGACTAGCTCGTTAATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
2228 2360 5.978814 ACTAGCTCGTTAATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
2229 2361 6.407202 ACTAGCTCGTTAATCAAAGATGGTT 58.593 36.000 0.00 0.00 33.49 3.67
2230 2362 7.553334 ACTAGCTCGTTAATCAAAGATGGTTA 58.447 34.615 0.00 0.00 30.84 2.85
2231 2363 8.204836 ACTAGCTCGTTAATCAAAGATGGTTAT 58.795 33.333 0.00 0.00 32.32 1.89
2232 2364 7.251704 AGCTCGTTAATCAAAGATGGTTATG 57.748 36.000 0.00 0.00 32.32 1.90
2233 2365 6.823689 AGCTCGTTAATCAAAGATGGTTATGT 59.176 34.615 0.00 0.00 32.32 2.29
2234 2366 7.336931 AGCTCGTTAATCAAAGATGGTTATGTT 59.663 33.333 0.00 0.00 32.32 2.71
2235 2367 7.968405 GCTCGTTAATCAAAGATGGTTATGTTT 59.032 33.333 0.00 0.00 32.32 2.83
2236 2368 9.490663 CTCGTTAATCAAAGATGGTTATGTTTC 57.509 33.333 0.00 0.00 32.32 2.78
2237 2369 8.455682 TCGTTAATCAAAGATGGTTATGTTTCC 58.544 33.333 0.00 0.00 32.32 3.13
2238 2370 8.458843 CGTTAATCAAAGATGGTTATGTTTCCT 58.541 33.333 0.00 0.00 32.32 3.36
2241 2373 7.573968 ATCAAAGATGGTTATGTTTCCTAGC 57.426 36.000 0.00 0.00 28.23 3.42
2242 2374 5.885912 TCAAAGATGGTTATGTTTCCTAGCC 59.114 40.000 0.00 0.00 28.23 3.93
2243 2375 5.450818 AAGATGGTTATGTTTCCTAGCCA 57.549 39.130 0.00 0.00 34.50 4.75
2244 2376 5.653255 AGATGGTTATGTTTCCTAGCCAT 57.347 39.130 0.00 0.00 41.28 4.40
2245 2377 6.763715 AGATGGTTATGTTTCCTAGCCATA 57.236 37.500 0.00 0.00 39.44 2.74
2246 2378 6.773638 AGATGGTTATGTTTCCTAGCCATAG 58.226 40.000 0.00 0.00 39.44 2.23
2247 2379 6.558775 AGATGGTTATGTTTCCTAGCCATAGA 59.441 38.462 0.00 0.00 39.44 1.98
2248 2380 5.925509 TGGTTATGTTTCCTAGCCATAGAC 58.074 41.667 0.00 0.00 0.00 2.59
2249 2381 5.427157 TGGTTATGTTTCCTAGCCATAGACA 59.573 40.000 0.00 0.00 0.00 3.41
2250 2382 6.101150 TGGTTATGTTTCCTAGCCATAGACAT 59.899 38.462 0.00 0.00 32.04 3.06
2251 2383 7.291416 TGGTTATGTTTCCTAGCCATAGACATA 59.709 37.037 0.00 0.00 30.64 2.29
2252 2384 8.154856 GGTTATGTTTCCTAGCCATAGACATAA 58.845 37.037 0.00 0.00 35.72 1.90
2253 2385 9.209175 GTTATGTTTCCTAGCCATAGACATAAG 57.791 37.037 6.34 0.00 37.14 1.73
2254 2386 6.808321 TGTTTCCTAGCCATAGACATAAGT 57.192 37.500 0.00 0.00 0.00 2.24
2255 2387 7.195374 TGTTTCCTAGCCATAGACATAAGTT 57.805 36.000 0.00 0.00 0.00 2.66
2256 2388 7.047891 TGTTTCCTAGCCATAGACATAAGTTG 58.952 38.462 0.00 0.00 0.00 3.16
2257 2389 6.808321 TTCCTAGCCATAGACATAAGTTGT 57.192 37.500 0.00 0.00 42.79 3.32
2273 2405 9.214957 ACATAAGTTGTCATTTGATTAACGAGA 57.785 29.630 0.00 0.00 30.89 4.04
2276 2408 7.905604 AGTTGTCATTTGATTAACGAGATCA 57.094 32.000 0.00 0.00 32.73 2.92
2277 2409 7.743104 AGTTGTCATTTGATTAACGAGATCAC 58.257 34.615 0.00 0.00 33.51 3.06
2278 2410 6.662414 TGTCATTTGATTAACGAGATCACC 57.338 37.500 0.00 0.00 33.51 4.02
2279 2411 6.406370 TGTCATTTGATTAACGAGATCACCT 58.594 36.000 0.00 0.00 33.51 4.00
2280 2412 6.535150 TGTCATTTGATTAACGAGATCACCTC 59.465 38.462 0.00 0.00 38.55 3.85
2281 2413 6.535150 GTCATTTGATTAACGAGATCACCTCA 59.465 38.462 0.00 0.00 42.06 3.86
2282 2414 7.225538 GTCATTTGATTAACGAGATCACCTCAT 59.774 37.037 0.00 0.00 42.06 2.90
2283 2415 7.770433 TCATTTGATTAACGAGATCACCTCATT 59.230 33.333 0.00 0.00 42.06 2.57
2284 2416 9.045223 CATTTGATTAACGAGATCACCTCATTA 57.955 33.333 0.00 0.00 42.06 1.90
2285 2417 8.648557 TTTGATTAACGAGATCACCTCATTAG 57.351 34.615 0.00 0.00 42.06 1.73
2299 2431 8.831297 ATCACCTCATTAGGAGAATGACGTGAT 61.831 40.741 24.05 24.05 46.18 3.06
2302 2434 6.220726 TCATTAGGAGAATGACGTGATTGA 57.779 37.500 4.55 0.00 32.21 2.57
2303 2435 6.042777 TCATTAGGAGAATGACGTGATTGAC 58.957 40.000 4.55 0.00 32.21 3.18
2304 2436 5.661056 TTAGGAGAATGACGTGATTGACT 57.339 39.130 4.55 3.06 0.00 3.41
2305 2437 4.543590 AGGAGAATGACGTGATTGACTT 57.456 40.909 4.55 0.00 0.00 3.01
2306 2438 4.248859 AGGAGAATGACGTGATTGACTTG 58.751 43.478 4.55 0.00 0.00 3.16
2307 2439 4.021104 AGGAGAATGACGTGATTGACTTGA 60.021 41.667 4.55 0.00 0.00 3.02
2308 2440 4.092091 GGAGAATGACGTGATTGACTTGAC 59.908 45.833 4.55 0.00 0.00 3.18
2309 2441 3.997021 AGAATGACGTGATTGACTTGACC 59.003 43.478 4.55 0.00 0.00 4.02
2310 2442 2.163818 TGACGTGATTGACTTGACCC 57.836 50.000 0.00 0.00 0.00 4.46
2311 2443 1.414550 TGACGTGATTGACTTGACCCA 59.585 47.619 0.00 0.00 0.00 4.51
2312 2444 2.038426 TGACGTGATTGACTTGACCCAT 59.962 45.455 0.00 0.00 0.00 4.00
2313 2445 3.074412 GACGTGATTGACTTGACCCATT 58.926 45.455 0.00 0.00 0.00 3.16
2314 2446 3.074412 ACGTGATTGACTTGACCCATTC 58.926 45.455 0.00 0.00 0.00 2.67
2315 2447 2.420022 CGTGATTGACTTGACCCATTCC 59.580 50.000 0.00 0.00 0.00 3.01
2316 2448 2.420022 GTGATTGACTTGACCCATTCCG 59.580 50.000 0.00 0.00 0.00 4.30
2317 2449 2.039746 TGATTGACTTGACCCATTCCGT 59.960 45.455 0.00 0.00 0.00 4.69
2318 2450 2.649531 TTGACTTGACCCATTCCGTT 57.350 45.000 0.00 0.00 0.00 4.44
2319 2451 3.773418 TTGACTTGACCCATTCCGTTA 57.227 42.857 0.00 0.00 0.00 3.18
2320 2452 3.328382 TGACTTGACCCATTCCGTTAG 57.672 47.619 0.00 0.00 0.00 2.34
2321 2453 2.007608 GACTTGACCCATTCCGTTAGC 58.992 52.381 0.00 0.00 0.00 3.09
2322 2454 1.628846 ACTTGACCCATTCCGTTAGCT 59.371 47.619 0.00 0.00 0.00 3.32
2323 2455 2.039879 ACTTGACCCATTCCGTTAGCTT 59.960 45.455 0.00 0.00 0.00 3.74
2324 2456 3.262405 ACTTGACCCATTCCGTTAGCTTA 59.738 43.478 0.00 0.00 0.00 3.09
2325 2457 3.536956 TGACCCATTCCGTTAGCTTAG 57.463 47.619 0.00 0.00 0.00 2.18
2326 2458 2.210961 GACCCATTCCGTTAGCTTAGC 58.789 52.381 0.00 0.00 0.00 3.09
2327 2459 1.557832 ACCCATTCCGTTAGCTTAGCA 59.442 47.619 7.07 0.00 0.00 3.49
2328 2460 1.940613 CCCATTCCGTTAGCTTAGCAC 59.059 52.381 7.07 0.00 0.00 4.40
2329 2461 2.420129 CCCATTCCGTTAGCTTAGCACT 60.420 50.000 7.07 0.00 0.00 4.40
2330 2462 2.866762 CCATTCCGTTAGCTTAGCACTC 59.133 50.000 7.07 0.00 0.00 3.51
2331 2463 2.273370 TTCCGTTAGCTTAGCACTCG 57.727 50.000 7.07 7.42 0.00 4.18
2332 2464 1.456296 TCCGTTAGCTTAGCACTCGA 58.544 50.000 7.07 0.00 0.00 4.04
2333 2465 2.022195 TCCGTTAGCTTAGCACTCGAT 58.978 47.619 7.07 0.00 0.00 3.59
2334 2466 2.033049 TCCGTTAGCTTAGCACTCGATC 59.967 50.000 7.07 0.00 0.00 3.69
2335 2467 2.037649 CGTTAGCTTAGCACTCGATCG 58.962 52.381 9.36 9.36 0.00 3.69
2336 2468 2.539142 CGTTAGCTTAGCACTCGATCGT 60.539 50.000 15.94 0.00 0.00 3.73
2337 2469 3.436496 GTTAGCTTAGCACTCGATCGTT 58.564 45.455 15.94 0.04 0.00 3.85
2338 2470 2.656560 AGCTTAGCACTCGATCGTTT 57.343 45.000 15.94 0.00 0.00 3.60
2339 2471 3.777465 AGCTTAGCACTCGATCGTTTA 57.223 42.857 15.94 0.00 0.00 2.01
2340 2472 3.696898 AGCTTAGCACTCGATCGTTTAG 58.303 45.455 15.94 7.91 0.00 1.85
2341 2473 3.128938 AGCTTAGCACTCGATCGTTTAGT 59.871 43.478 15.94 8.62 0.00 2.24
2342 2474 4.334759 AGCTTAGCACTCGATCGTTTAGTA 59.665 41.667 15.94 0.27 0.00 1.82
2343 2475 5.008811 AGCTTAGCACTCGATCGTTTAGTAT 59.991 40.000 15.94 6.33 0.00 2.12
2344 2476 5.115773 GCTTAGCACTCGATCGTTTAGTATG 59.884 44.000 15.94 2.12 0.00 2.39
2345 2477 4.634184 AGCACTCGATCGTTTAGTATGT 57.366 40.909 15.94 0.00 0.00 2.29
2346 2478 4.995124 AGCACTCGATCGTTTAGTATGTT 58.005 39.130 15.94 0.00 0.00 2.71
2347 2479 4.798907 AGCACTCGATCGTTTAGTATGTTG 59.201 41.667 15.94 0.73 0.00 3.33
2348 2480 4.548346 GCACTCGATCGTTTAGTATGTTGC 60.548 45.833 15.94 6.99 0.00 4.17
2349 2481 4.798907 CACTCGATCGTTTAGTATGTTGCT 59.201 41.667 15.94 0.00 0.00 3.91
2350 2482 5.969435 CACTCGATCGTTTAGTATGTTGCTA 59.031 40.000 15.94 0.00 0.00 3.49
2351 2483 6.637254 CACTCGATCGTTTAGTATGTTGCTAT 59.363 38.462 15.94 0.00 0.00 2.97
2352 2484 7.167635 CACTCGATCGTTTAGTATGTTGCTATT 59.832 37.037 15.94 0.00 0.00 1.73
2353 2485 7.167635 ACTCGATCGTTTAGTATGTTGCTATTG 59.832 37.037 15.94 0.00 0.00 1.90
2354 2486 6.065153 CGATCGTTTAGTATGTTGCTATTGC 58.935 40.000 7.03 0.00 40.20 3.56
2355 2487 6.074302 CGATCGTTTAGTATGTTGCTATTGCT 60.074 38.462 7.03 0.00 40.48 3.91
2356 2488 6.978343 TCGTTTAGTATGTTGCTATTGCTT 57.022 33.333 0.00 0.00 40.48 3.91
2357 2489 7.372451 TCGTTTAGTATGTTGCTATTGCTTT 57.628 32.000 0.00 0.00 40.48 3.51
2358 2490 7.461107 TCGTTTAGTATGTTGCTATTGCTTTC 58.539 34.615 0.00 0.00 40.48 2.62
2359 2491 7.333423 TCGTTTAGTATGTTGCTATTGCTTTCT 59.667 33.333 0.00 0.00 40.48 2.52
2360 2492 7.962918 CGTTTAGTATGTTGCTATTGCTTTCTT 59.037 33.333 0.00 0.00 40.48 2.52
2361 2493 9.278734 GTTTAGTATGTTGCTATTGCTTTCTTC 57.721 33.333 0.00 0.00 40.48 2.87
2362 2494 8.560355 TTAGTATGTTGCTATTGCTTTCTTCA 57.440 30.769 0.00 0.00 40.48 3.02
2363 2495 7.636150 AGTATGTTGCTATTGCTTTCTTCAT 57.364 32.000 0.00 0.17 40.48 2.57
2364 2496 7.478322 AGTATGTTGCTATTGCTTTCTTCATG 58.522 34.615 0.00 0.00 40.48 3.07
2365 2497 5.963176 TGTTGCTATTGCTTTCTTCATGA 57.037 34.783 0.00 0.00 40.48 3.07
2366 2498 5.702865 TGTTGCTATTGCTTTCTTCATGAC 58.297 37.500 0.00 0.00 40.48 3.06
2367 2499 5.474532 TGTTGCTATTGCTTTCTTCATGACT 59.525 36.000 0.00 0.00 40.48 3.41
2368 2500 6.016024 TGTTGCTATTGCTTTCTTCATGACTT 60.016 34.615 0.00 0.00 40.48 3.01
2369 2501 7.174772 TGTTGCTATTGCTTTCTTCATGACTTA 59.825 33.333 0.00 0.00 40.48 2.24
2370 2502 7.870509 TGCTATTGCTTTCTTCATGACTTAT 57.129 32.000 0.00 0.00 40.48 1.73
2371 2503 8.962884 TGCTATTGCTTTCTTCATGACTTATA 57.037 30.769 0.00 0.00 40.48 0.98
2372 2504 8.830580 TGCTATTGCTTTCTTCATGACTTATAC 58.169 33.333 0.00 0.00 40.48 1.47
2373 2505 8.830580 GCTATTGCTTTCTTCATGACTTATACA 58.169 33.333 0.00 0.00 36.03 2.29
2376 2508 8.565896 TTGCTTTCTTCATGACTTATACATGT 57.434 30.769 2.69 2.69 43.56 3.21
2377 2509 8.565896 TGCTTTCTTCATGACTTATACATGTT 57.434 30.769 2.30 0.00 43.56 2.71
2378 2510 8.668353 TGCTTTCTTCATGACTTATACATGTTC 58.332 33.333 2.30 0.00 43.56 3.18
2379 2511 8.125448 GCTTTCTTCATGACTTATACATGTTCC 58.875 37.037 2.30 0.00 43.56 3.62
2380 2512 9.388506 CTTTCTTCATGACTTATACATGTTCCT 57.611 33.333 2.30 0.00 43.56 3.36
2383 2515 9.987272 TCTTCATGACTTATACATGTTCCTATG 57.013 33.333 2.30 1.10 43.56 2.23
2384 2516 9.987272 CTTCATGACTTATACATGTTCCTATGA 57.013 33.333 2.30 3.47 43.56 2.15
2385 2517 9.764363 TTCATGACTTATACATGTTCCTATGAC 57.236 33.333 2.30 0.00 43.56 3.06
2386 2518 9.147732 TCATGACTTATACATGTTCCTATGACT 57.852 33.333 2.30 0.00 43.56 3.41
2398 2530 9.096160 CATGTTCCTATGACTATGAGATTATGC 57.904 37.037 0.00 0.00 0.00 3.14
2399 2531 8.193953 TGTTCCTATGACTATGAGATTATGCA 57.806 34.615 0.00 0.00 0.00 3.96
2400 2532 8.650490 TGTTCCTATGACTATGAGATTATGCAA 58.350 33.333 0.00 0.00 0.00 4.08
2401 2533 8.930760 GTTCCTATGACTATGAGATTATGCAAC 58.069 37.037 0.00 0.00 0.00 4.17
2402 2534 8.427902 TCCTATGACTATGAGATTATGCAACT 57.572 34.615 0.00 0.00 0.00 3.16
2403 2535 8.526978 TCCTATGACTATGAGATTATGCAACTC 58.473 37.037 0.00 0.00 0.00 3.01
2404 2536 7.763528 CCTATGACTATGAGATTATGCAACTCC 59.236 40.741 0.00 0.00 0.00 3.85
2405 2537 5.858381 TGACTATGAGATTATGCAACTCCC 58.142 41.667 0.00 0.00 0.00 4.30
2406 2538 4.887748 ACTATGAGATTATGCAACTCCCG 58.112 43.478 0.00 0.00 0.00 5.14
2407 2539 3.845781 ATGAGATTATGCAACTCCCGT 57.154 42.857 0.00 0.00 0.00 5.28
2408 2540 3.627395 TGAGATTATGCAACTCCCGTT 57.373 42.857 0.00 0.00 0.00 4.44
2409 2541 3.950397 TGAGATTATGCAACTCCCGTTT 58.050 40.909 0.00 0.00 0.00 3.60
2410 2542 5.092554 TGAGATTATGCAACTCCCGTTTA 57.907 39.130 0.00 0.00 0.00 2.01
2411 2543 4.873827 TGAGATTATGCAACTCCCGTTTAC 59.126 41.667 0.00 0.00 0.00 2.01
2412 2544 4.196971 AGATTATGCAACTCCCGTTTACC 58.803 43.478 0.00 0.00 0.00 2.85
2413 2545 2.012937 TATGCAACTCCCGTTTACCG 57.987 50.000 0.00 0.00 0.00 4.02
2431 2563 0.307760 CGGAGGAACACTTTGTGTGC 59.692 55.000 4.01 2.15 46.79 4.57
2432 2564 1.680338 GGAGGAACACTTTGTGTGCT 58.320 50.000 8.51 2.39 46.79 4.40
2433 2565 2.805295 CGGAGGAACACTTTGTGTGCTA 60.805 50.000 8.51 0.00 46.79 3.49
2434 2566 2.548480 GGAGGAACACTTTGTGTGCTAC 59.452 50.000 8.51 3.85 46.79 3.58
2435 2567 2.548480 GAGGAACACTTTGTGTGCTACC 59.452 50.000 8.51 8.09 46.79 3.18
2436 2568 2.092646 AGGAACACTTTGTGTGCTACCA 60.093 45.455 8.51 0.00 46.79 3.25
2437 2569 2.685897 GGAACACTTTGTGTGCTACCAA 59.314 45.455 8.51 0.00 46.79 3.67
2438 2570 3.129638 GGAACACTTTGTGTGCTACCAAA 59.870 43.478 8.51 0.00 46.79 3.28
2439 2571 4.102649 GAACACTTTGTGTGCTACCAAAC 58.897 43.478 4.01 0.00 46.79 2.93
2440 2572 2.715268 CACTTTGTGTGCTACCAAACG 58.285 47.619 0.00 0.00 40.06 3.60
2441 2573 2.096819 CACTTTGTGTGCTACCAAACGT 59.903 45.455 0.00 0.00 40.06 3.99
2442 2574 2.353579 ACTTTGTGTGCTACCAAACGTC 59.646 45.455 0.00 0.00 31.47 4.34
2443 2575 2.025589 TTGTGTGCTACCAAACGTCA 57.974 45.000 0.00 0.00 31.47 4.35
2444 2576 1.292061 TGTGTGCTACCAAACGTCAC 58.708 50.000 0.00 0.00 31.47 3.67
2445 2577 1.292061 GTGTGCTACCAAACGTCACA 58.708 50.000 0.34 0.34 35.57 3.58
2446 2578 1.666700 GTGTGCTACCAAACGTCACAA 59.333 47.619 5.66 0.00 39.07 3.33
2447 2579 1.666700 TGTGCTACCAAACGTCACAAC 59.333 47.619 1.90 0.00 35.08 3.32
2457 2589 2.592212 CGTCACAACGTAAACGGGT 58.408 52.632 7.50 2.05 43.94 5.28
2458 2590 0.230260 CGTCACAACGTAAACGGGTG 59.770 55.000 17.85 17.85 43.94 4.61
2460 2592 2.529780 TCACAACGTAAACGGGTGAT 57.470 45.000 20.78 4.10 45.61 3.06
2461 2593 2.836262 TCACAACGTAAACGGGTGATT 58.164 42.857 20.78 0.15 45.61 2.57
2462 2594 3.987547 TCACAACGTAAACGGGTGATTA 58.012 40.909 20.78 6.72 45.61 1.75
2463 2595 4.567971 TCACAACGTAAACGGGTGATTAT 58.432 39.130 20.78 0.00 45.61 1.28
2464 2596 5.718146 TCACAACGTAAACGGGTGATTATA 58.282 37.500 20.78 6.18 45.61 0.98
2465 2597 6.162079 TCACAACGTAAACGGGTGATTATAA 58.838 36.000 20.78 5.66 45.61 0.98
2466 2598 6.648310 TCACAACGTAAACGGGTGATTATAAA 59.352 34.615 20.78 5.14 45.61 1.40
2467 2599 6.957077 CACAACGTAAACGGGTGATTATAAAG 59.043 38.462 18.67 0.00 45.22 1.85
2468 2600 6.092533 ACAACGTAAACGGGTGATTATAAAGG 59.907 38.462 13.29 0.00 44.95 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.210961 GGCTATTTCTTCTGGCGGTAC 58.789 52.381 0.00 0.00 0.00 3.34
1 2 1.140252 GGGCTATTTCTTCTGGCGGTA 59.860 52.381 0.00 0.00 0.00 4.02
2 3 0.107165 GGGCTATTTCTTCTGGCGGT 60.107 55.000 0.00 0.00 0.00 5.68
3 4 0.819666 GGGGCTATTTCTTCTGGCGG 60.820 60.000 0.00 0.00 0.00 6.13
4 5 0.181350 AGGGGCTATTTCTTCTGGCG 59.819 55.000 0.00 0.00 0.00 5.69
5 6 2.443958 AAGGGGCTATTTCTTCTGGC 57.556 50.000 0.00 0.00 0.00 4.85
6 7 8.712228 AATAATAAAGGGGCTATTTCTTCTGG 57.288 34.615 0.00 0.00 0.00 3.86
9 10 9.809395 ACCTAATAATAAAGGGGCTATTTCTTC 57.191 33.333 0.00 0.00 37.18 2.87
14 15 9.854303 TCTCTACCTAATAATAAAGGGGCTATT 57.146 33.333 0.00 0.00 37.18 1.73
17 18 9.269494 GTATCTCTACCTAATAATAAAGGGGCT 57.731 37.037 0.00 0.00 37.18 5.19
18 19 9.269494 AGTATCTCTACCTAATAATAAAGGGGC 57.731 37.037 0.00 0.00 37.18 5.80
25 26 9.175312 CGGCTCAAGTATCTCTACCTAATAATA 57.825 37.037 0.00 0.00 0.00 0.98
26 27 7.122948 CCGGCTCAAGTATCTCTACCTAATAAT 59.877 40.741 0.00 0.00 0.00 1.28
27 28 6.433404 CCGGCTCAAGTATCTCTACCTAATAA 59.567 42.308 0.00 0.00 0.00 1.40
28 29 5.944599 CCGGCTCAAGTATCTCTACCTAATA 59.055 44.000 0.00 0.00 0.00 0.98
29 30 4.767928 CCGGCTCAAGTATCTCTACCTAAT 59.232 45.833 0.00 0.00 0.00 1.73
30 31 4.142790 CCGGCTCAAGTATCTCTACCTAA 58.857 47.826 0.00 0.00 0.00 2.69
31 32 3.137913 ACCGGCTCAAGTATCTCTACCTA 59.862 47.826 0.00 0.00 0.00 3.08
32 33 2.091775 ACCGGCTCAAGTATCTCTACCT 60.092 50.000 0.00 0.00 0.00 3.08
33 34 2.034812 CACCGGCTCAAGTATCTCTACC 59.965 54.545 0.00 0.00 0.00 3.18
34 35 2.034812 CCACCGGCTCAAGTATCTCTAC 59.965 54.545 0.00 0.00 0.00 2.59
35 36 2.092049 TCCACCGGCTCAAGTATCTCTA 60.092 50.000 0.00 0.00 0.00 2.43
36 37 1.115467 CCACCGGCTCAAGTATCTCT 58.885 55.000 0.00 0.00 0.00 3.10
37 38 1.112113 TCCACCGGCTCAAGTATCTC 58.888 55.000 0.00 0.00 0.00 2.75
38 39 0.824759 GTCCACCGGCTCAAGTATCT 59.175 55.000 0.00 0.00 0.00 1.98
39 40 0.535335 TGTCCACCGGCTCAAGTATC 59.465 55.000 0.00 0.00 0.00 2.24
40 41 1.204146 ATGTCCACCGGCTCAAGTAT 58.796 50.000 0.00 0.00 0.00 2.12
41 42 0.981183 AATGTCCACCGGCTCAAGTA 59.019 50.000 0.00 0.00 0.00 2.24
42 43 0.321653 GAATGTCCACCGGCTCAAGT 60.322 55.000 0.00 0.00 0.00 3.16
43 44 0.036010 AGAATGTCCACCGGCTCAAG 60.036 55.000 0.00 0.00 0.00 3.02
44 45 0.400213 AAGAATGTCCACCGGCTCAA 59.600 50.000 0.00 0.00 0.00 3.02
45 46 0.321564 CAAGAATGTCCACCGGCTCA 60.322 55.000 0.00 0.00 0.00 4.26
46 47 1.648467 GCAAGAATGTCCACCGGCTC 61.648 60.000 0.00 0.00 0.00 4.70
47 48 1.675641 GCAAGAATGTCCACCGGCT 60.676 57.895 0.00 0.00 0.00 5.52
48 49 2.700773 GGCAAGAATGTCCACCGGC 61.701 63.158 0.00 0.00 0.00 6.13
49 50 2.398554 CGGCAAGAATGTCCACCGG 61.399 63.158 0.00 0.00 37.04 5.28
50 51 2.398554 CCGGCAAGAATGTCCACCG 61.399 63.158 0.00 0.00 40.30 4.94
51 52 0.893727 AACCGGCAAGAATGTCCACC 60.894 55.000 0.00 0.00 0.00 4.61
52 53 0.958822 AAACCGGCAAGAATGTCCAC 59.041 50.000 0.00 0.00 0.00 4.02
53 54 2.570415 TAAACCGGCAAGAATGTCCA 57.430 45.000 0.00 0.00 0.00 4.02
54 55 3.004944 TGTTTAAACCGGCAAGAATGTCC 59.995 43.478 15.59 0.00 0.00 4.02
55 56 4.231718 TGTTTAAACCGGCAAGAATGTC 57.768 40.909 15.59 0.00 0.00 3.06
56 57 4.339814 TCTTGTTTAAACCGGCAAGAATGT 59.660 37.500 15.59 0.00 42.66 2.71
57 58 4.679654 GTCTTGTTTAAACCGGCAAGAATG 59.320 41.667 17.91 0.00 45.66 2.67
58 59 4.555906 CGTCTTGTTTAAACCGGCAAGAAT 60.556 41.667 17.91 0.00 45.66 2.40
59 60 3.242804 CGTCTTGTTTAAACCGGCAAGAA 60.243 43.478 17.91 4.19 45.66 2.52
60 61 2.288458 CGTCTTGTTTAAACCGGCAAGA 59.712 45.455 15.59 13.82 43.16 3.02
61 62 2.288458 TCGTCTTGTTTAAACCGGCAAG 59.712 45.455 15.59 11.88 39.52 4.01
62 63 2.286872 TCGTCTTGTTTAAACCGGCAA 58.713 42.857 15.59 2.67 0.00 4.52
63 64 1.950828 TCGTCTTGTTTAAACCGGCA 58.049 45.000 15.59 0.00 0.00 5.69
64 65 2.481185 TCATCGTCTTGTTTAAACCGGC 59.519 45.455 15.59 7.46 0.00 6.13
65 66 4.390603 TCATCATCGTCTTGTTTAAACCGG 59.609 41.667 15.59 0.00 0.00 5.28
66 67 5.120208 AGTCATCATCGTCTTGTTTAAACCG 59.880 40.000 15.59 11.40 0.00 4.44
67 68 6.147164 TGAGTCATCATCGTCTTGTTTAAACC 59.853 38.462 15.59 0.00 0.00 3.27
68 69 7.095607 ACTGAGTCATCATCGTCTTGTTTAAAC 60.096 37.037 11.54 11.54 34.12 2.01
69 70 6.929049 ACTGAGTCATCATCGTCTTGTTTAAA 59.071 34.615 0.00 0.00 34.12 1.52
70 71 6.455647 ACTGAGTCATCATCGTCTTGTTTAA 58.544 36.000 0.00 0.00 34.12 1.52
71 72 6.025749 ACTGAGTCATCATCGTCTTGTTTA 57.974 37.500 0.00 0.00 34.12 2.01
72 73 4.887748 ACTGAGTCATCATCGTCTTGTTT 58.112 39.130 0.00 0.00 34.12 2.83
73 74 4.527509 ACTGAGTCATCATCGTCTTGTT 57.472 40.909 0.00 0.00 34.12 2.83
74 75 5.586339 CATACTGAGTCATCATCGTCTTGT 58.414 41.667 0.00 0.00 34.12 3.16
75 76 4.443725 GCATACTGAGTCATCATCGTCTTG 59.556 45.833 0.00 0.00 34.12 3.02
76 77 4.098501 TGCATACTGAGTCATCATCGTCTT 59.901 41.667 0.00 0.00 34.12 3.01
77 78 3.633986 TGCATACTGAGTCATCATCGTCT 59.366 43.478 0.00 0.00 34.12 4.18
78 79 3.969899 TGCATACTGAGTCATCATCGTC 58.030 45.455 0.00 0.00 34.12 4.20
79 80 4.391405 TTGCATACTGAGTCATCATCGT 57.609 40.909 0.00 0.00 34.12 3.73
80 81 7.592439 ATTATTGCATACTGAGTCATCATCG 57.408 36.000 0.00 0.00 34.12 3.84
81 82 8.996271 TGAATTATTGCATACTGAGTCATCATC 58.004 33.333 0.00 0.00 34.12 2.92
82 83 8.913487 TGAATTATTGCATACTGAGTCATCAT 57.087 30.769 0.00 0.00 34.12 2.45
83 84 8.615211 GTTGAATTATTGCATACTGAGTCATCA 58.385 33.333 0.00 0.00 0.00 3.07
84 85 8.072567 GGTTGAATTATTGCATACTGAGTCATC 58.927 37.037 0.00 0.00 0.00 2.92
85 86 7.557358 TGGTTGAATTATTGCATACTGAGTCAT 59.443 33.333 0.00 0.00 0.00 3.06
86 87 6.883756 TGGTTGAATTATTGCATACTGAGTCA 59.116 34.615 0.00 0.00 0.00 3.41
87 88 7.320443 TGGTTGAATTATTGCATACTGAGTC 57.680 36.000 0.00 0.00 0.00 3.36
88 89 7.776969 AGATGGTTGAATTATTGCATACTGAGT 59.223 33.333 0.00 0.00 0.00 3.41
89 90 8.162878 AGATGGTTGAATTATTGCATACTGAG 57.837 34.615 0.00 0.00 0.00 3.35
90 91 8.523915 AAGATGGTTGAATTATTGCATACTGA 57.476 30.769 0.00 0.00 0.00 3.41
91 92 9.669353 GTAAGATGGTTGAATTATTGCATACTG 57.331 33.333 0.00 0.00 0.00 2.74
92 93 9.632638 AGTAAGATGGTTGAATTATTGCATACT 57.367 29.630 0.00 0.00 0.00 2.12
93 94 9.884465 GAGTAAGATGGTTGAATTATTGCATAC 57.116 33.333 0.00 0.00 0.00 2.39
94 95 9.851686 AGAGTAAGATGGTTGAATTATTGCATA 57.148 29.630 0.00 0.00 0.00 3.14
95 96 8.757982 AGAGTAAGATGGTTGAATTATTGCAT 57.242 30.769 0.00 0.00 0.00 3.96
96 97 7.828717 TGAGAGTAAGATGGTTGAATTATTGCA 59.171 33.333 0.00 0.00 0.00 4.08
97 98 8.213518 TGAGAGTAAGATGGTTGAATTATTGC 57.786 34.615 0.00 0.00 0.00 3.56
102 103 9.965902 AACTATTGAGAGTAAGATGGTTGAATT 57.034 29.630 0.00 0.00 0.00 2.17
170 171 9.003658 CAACTCAAAAGACAATAACCAGAGTAT 57.996 33.333 0.00 0.00 33.84 2.12
171 172 7.444183 CCAACTCAAAAGACAATAACCAGAGTA 59.556 37.037 0.00 0.00 33.84 2.59
172 173 6.263168 CCAACTCAAAAGACAATAACCAGAGT 59.737 38.462 0.00 0.00 35.53 3.24
173 174 6.486657 TCCAACTCAAAAGACAATAACCAGAG 59.513 38.462 0.00 0.00 0.00 3.35
174 175 6.361433 TCCAACTCAAAAGACAATAACCAGA 58.639 36.000 0.00 0.00 0.00 3.86
175 176 6.633500 TCCAACTCAAAAGACAATAACCAG 57.367 37.500 0.00 0.00 0.00 4.00
176 177 7.069331 ACATTCCAACTCAAAAGACAATAACCA 59.931 33.333 0.00 0.00 0.00 3.67
177 178 7.433680 ACATTCCAACTCAAAAGACAATAACC 58.566 34.615 0.00 0.00 0.00 2.85
181 182 9.520515 AGTATACATTCCAACTCAAAAGACAAT 57.479 29.630 5.50 0.00 0.00 2.71
182 183 8.918202 AGTATACATTCCAACTCAAAAGACAA 57.082 30.769 5.50 0.00 0.00 3.18
183 184 8.375506 AGAGTATACATTCCAACTCAAAAGACA 58.624 33.333 5.50 0.00 40.65 3.41
184 185 8.660373 CAGAGTATACATTCCAACTCAAAAGAC 58.340 37.037 5.50 0.00 40.65 3.01
185 186 7.824289 CCAGAGTATACATTCCAACTCAAAAGA 59.176 37.037 5.50 0.00 40.65 2.52
186 187 7.607991 ACCAGAGTATACATTCCAACTCAAAAG 59.392 37.037 5.50 0.00 40.65 2.27
187 188 7.458397 ACCAGAGTATACATTCCAACTCAAAA 58.542 34.615 5.50 0.00 40.65 2.44
188 189 7.016153 ACCAGAGTATACATTCCAACTCAAA 57.984 36.000 5.50 0.00 40.65 2.69
189 190 6.620877 ACCAGAGTATACATTCCAACTCAA 57.379 37.500 5.50 0.00 40.65 3.02
190 191 6.620877 AACCAGAGTATACATTCCAACTCA 57.379 37.500 5.50 0.00 40.65 3.41
191 192 6.316390 CCAAACCAGAGTATACATTCCAACTC 59.684 42.308 5.50 0.00 38.90 3.01
192 193 6.180472 CCAAACCAGAGTATACATTCCAACT 58.820 40.000 5.50 0.00 0.00 3.16
193 194 5.357032 CCCAAACCAGAGTATACATTCCAAC 59.643 44.000 5.50 0.00 0.00 3.77
194 195 5.014755 ACCCAAACCAGAGTATACATTCCAA 59.985 40.000 5.50 0.00 0.00 3.53
195 196 4.538490 ACCCAAACCAGAGTATACATTCCA 59.462 41.667 5.50 0.00 0.00 3.53
196 197 4.881850 CACCCAAACCAGAGTATACATTCC 59.118 45.833 5.50 0.00 0.00 3.01
197 198 5.354234 CACACCCAAACCAGAGTATACATTC 59.646 44.000 5.50 0.00 0.00 2.67
198 199 5.013704 TCACACCCAAACCAGAGTATACATT 59.986 40.000 5.50 0.00 0.00 2.71
199 200 4.534500 TCACACCCAAACCAGAGTATACAT 59.466 41.667 5.50 0.00 0.00 2.29
200 201 3.904965 TCACACCCAAACCAGAGTATACA 59.095 43.478 5.50 0.00 0.00 2.29
201 202 4.546829 TCACACCCAAACCAGAGTATAC 57.453 45.455 0.00 0.00 0.00 1.47
202 203 5.772393 AATCACACCCAAACCAGAGTATA 57.228 39.130 0.00 0.00 0.00 1.47
203 204 4.657814 AATCACACCCAAACCAGAGTAT 57.342 40.909 0.00 0.00 0.00 2.12
204 205 5.163184 TGTTAATCACACCCAAACCAGAGTA 60.163 40.000 0.00 0.00 0.00 2.59
205 206 4.142038 GTTAATCACACCCAAACCAGAGT 58.858 43.478 0.00 0.00 0.00 3.24
206 207 4.141287 TGTTAATCACACCCAAACCAGAG 58.859 43.478 0.00 0.00 0.00 3.35
207 208 4.171878 TGTTAATCACACCCAAACCAGA 57.828 40.909 0.00 0.00 0.00 3.86
208 209 6.015856 TGTTATGTTAATCACACCCAAACCAG 60.016 38.462 0.00 0.00 38.61 4.00
209 210 5.833667 TGTTATGTTAATCACACCCAAACCA 59.166 36.000 0.00 0.00 38.61 3.67
210 211 6.334102 TGTTATGTTAATCACACCCAAACC 57.666 37.500 0.00 0.00 38.61 3.27
211 212 8.707839 CATTTGTTATGTTAATCACACCCAAAC 58.292 33.333 0.00 0.00 38.61 2.93
212 213 7.875041 CCATTTGTTATGTTAATCACACCCAAA 59.125 33.333 0.00 0.00 38.61 3.28
213 214 7.233553 TCCATTTGTTATGTTAATCACACCCAA 59.766 33.333 0.00 0.00 38.61 4.12
214 215 6.721668 TCCATTTGTTATGTTAATCACACCCA 59.278 34.615 0.00 0.00 38.61 4.51
215 216 7.164230 TCCATTTGTTATGTTAATCACACCC 57.836 36.000 0.00 0.00 38.61 4.61
216 217 8.921670 GTTTCCATTTGTTATGTTAATCACACC 58.078 33.333 0.00 0.00 38.61 4.16
217 218 8.921670 GGTTTCCATTTGTTATGTTAATCACAC 58.078 33.333 0.00 0.00 38.61 3.82
218 219 8.642432 TGGTTTCCATTTGTTATGTTAATCACA 58.358 29.630 0.00 0.00 40.71 3.58
219 220 9.482627 TTGGTTTCCATTTGTTATGTTAATCAC 57.517 29.630 0.00 0.00 31.53 3.06
220 221 9.703892 CTTGGTTTCCATTTGTTATGTTAATCA 57.296 29.630 0.00 0.00 31.53 2.57
221 222 9.150348 CCTTGGTTTCCATTTGTTATGTTAATC 57.850 33.333 0.00 0.00 31.53 1.75
222 223 8.655901 ACCTTGGTTTCCATTTGTTATGTTAAT 58.344 29.630 0.00 0.00 31.53 1.40
223 224 7.928706 CACCTTGGTTTCCATTTGTTATGTTAA 59.071 33.333 0.00 0.00 31.53 2.01
224 225 7.070074 ACACCTTGGTTTCCATTTGTTATGTTA 59.930 33.333 0.00 0.00 31.53 2.41
225 226 6.126911 ACACCTTGGTTTCCATTTGTTATGTT 60.127 34.615 0.00 0.00 31.53 2.71
226 227 5.365314 ACACCTTGGTTTCCATTTGTTATGT 59.635 36.000 0.00 0.00 31.53 2.29
227 228 5.852827 ACACCTTGGTTTCCATTTGTTATG 58.147 37.500 0.00 0.00 31.53 1.90
228 229 6.493189 AACACCTTGGTTTCCATTTGTTAT 57.507 33.333 7.78 0.00 32.24 1.89
229 230 5.941555 AACACCTTGGTTTCCATTTGTTA 57.058 34.783 7.78 0.00 32.24 2.41
230 231 4.835284 AACACCTTGGTTTCCATTTGTT 57.165 36.364 0.00 0.00 31.53 2.83
231 232 4.765273 GAAACACCTTGGTTTCCATTTGT 58.235 39.130 7.39 0.00 46.88 2.83
257 258 7.875041 ATATCTGGATATTTCAGACCGTTTCTG 59.125 37.037 10.60 5.15 43.07 3.02
258 259 5.677319 TCTGGATATTTCAGACCGTTTCT 57.323 39.130 5.84 0.00 36.46 2.52
259 260 9.706691 TTATATCTGGATATTTCAGACCGTTTC 57.293 33.333 10.60 0.00 43.07 2.78
260 261 9.712305 CTTATATCTGGATATTTCAGACCGTTT 57.288 33.333 10.60 0.77 43.07 3.60
261 262 8.871125 ACTTATATCTGGATATTTCAGACCGTT 58.129 33.333 10.60 1.05 43.07 4.44
262 263 8.423906 ACTTATATCTGGATATTTCAGACCGT 57.576 34.615 10.60 4.78 43.07 4.83
273 274 9.892444 TTCTCCCAACTAACTTATATCTGGATA 57.108 33.333 0.00 0.00 0.00 2.59
374 376 1.630126 GCCAGGATCTTCCAGGAGCA 61.630 60.000 9.01 0.00 45.26 4.26
394 396 4.024387 GCAGTGTTAGTTTTTGATCCGACA 60.024 41.667 0.00 0.00 0.00 4.35
493 496 4.021229 CCTTTTTATACCCCCTGTTGGTC 58.979 47.826 0.00 0.00 37.31 4.02
777 780 2.606519 CCCGAGGAGGTTGACCCA 60.607 66.667 0.00 0.00 38.74 4.51
909 956 4.856801 GCGGTCATCGGCCATGGT 62.857 66.667 14.67 0.00 39.69 3.55
1373 1425 5.836024 ACTTCACAAATGTAACCCTAGGA 57.164 39.130 11.48 0.00 0.00 2.94
1426 1486 2.522836 AGACCGAATCTAGCAGCATG 57.477 50.000 0.00 0.00 35.15 4.06
1428 1488 3.384789 ACAATAGACCGAATCTAGCAGCA 59.615 43.478 0.00 0.00 43.35 4.41
1529 1596 7.309194 GGAACAAGAAGCACACACCTATAATTT 60.309 37.037 0.00 0.00 0.00 1.82
2004 2136 9.130661 CTGACCTTTCTCTAATCAGATTCTCTA 57.869 37.037 0.00 0.00 39.33 2.43
2010 2142 7.327214 GTGAACTGACCTTTCTCTAATCAGAT 58.673 38.462 6.56 0.00 39.33 2.90
2049 2181 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
2061 2193 9.907229 ATAATACTTTATTATTGCCTCTAGGGC 57.093 33.333 13.60 13.60 44.30 5.19
2118 2250 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
2119 2251 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
2120 2252 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
2121 2253 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
2122 2254 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
2123 2255 7.554835 TGTTTCCGGTTAATACAATTCTAGCAT 59.445 33.333 0.00 0.00 0.00 3.79
2124 2256 6.879993 TGTTTCCGGTTAATACAATTCTAGCA 59.120 34.615 0.00 0.00 0.00 3.49
2125 2257 7.311364 TGTTTCCGGTTAATACAATTCTAGC 57.689 36.000 0.00 0.00 0.00 3.42
2133 2265 9.616156 ACATGTATTATGTTTCCGGTTAATACA 57.384 29.630 22.83 22.83 44.85 2.29
2134 2266 9.872757 CACATGTATTATGTTTCCGGTTAATAC 57.127 33.333 0.00 12.47 37.73 1.89
2135 2267 9.616156 ACACATGTATTATGTTTCCGGTTAATA 57.384 29.630 0.00 0.00 0.00 0.98
2136 2268 8.402472 CACACATGTATTATGTTTCCGGTTAAT 58.598 33.333 0.00 1.95 0.00 1.40
2137 2269 7.606839 TCACACATGTATTATGTTTCCGGTTAA 59.393 33.333 0.00 0.00 0.00 2.01
2138 2270 7.104290 TCACACATGTATTATGTTTCCGGTTA 58.896 34.615 0.00 0.00 0.00 2.85
2139 2271 5.941058 TCACACATGTATTATGTTTCCGGTT 59.059 36.000 0.00 0.00 0.00 4.44
2140 2272 5.492895 TCACACATGTATTATGTTTCCGGT 58.507 37.500 0.00 0.00 0.00 5.28
2141 2273 6.429791 TTCACACATGTATTATGTTTCCGG 57.570 37.500 0.00 0.00 0.00 5.14
2157 2289 9.586435 CACTCTGTTTGTCTATATATTCACACA 57.414 33.333 0.00 0.00 0.00 3.72
2158 2290 9.587772 ACACTCTGTTTGTCTATATATTCACAC 57.412 33.333 0.00 0.00 0.00 3.82
2159 2291 9.803315 GACACTCTGTTTGTCTATATATTCACA 57.197 33.333 0.00 0.00 40.30 3.58
2160 2292 9.803315 TGACACTCTGTTTGTCTATATATTCAC 57.197 33.333 11.01 0.00 43.30 3.18
2161 2293 9.803315 GTGACACTCTGTTTGTCTATATATTCA 57.197 33.333 0.00 0.00 43.30 2.57
2165 2297 9.682465 ACTAGTGACACTCTGTTTGTCTATATA 57.318 33.333 12.39 0.00 43.30 0.86
2166 2298 8.582657 ACTAGTGACACTCTGTTTGTCTATAT 57.417 34.615 12.39 0.00 43.30 0.86
2167 2299 7.997773 ACTAGTGACACTCTGTTTGTCTATA 57.002 36.000 12.39 0.00 43.30 1.31
2168 2300 6.902771 ACTAGTGACACTCTGTTTGTCTAT 57.097 37.500 12.39 0.00 43.30 1.98
2169 2301 7.575155 GCATACTAGTGACACTCTGTTTGTCTA 60.575 40.741 12.39 0.00 43.30 2.59
2170 2302 6.682746 CATACTAGTGACACTCTGTTTGTCT 58.317 40.000 12.39 0.00 43.30 3.41
2171 2303 5.346281 GCATACTAGTGACACTCTGTTTGTC 59.654 44.000 12.39 9.81 43.22 3.18
2172 2304 5.230942 GCATACTAGTGACACTCTGTTTGT 58.769 41.667 12.39 5.61 0.00 2.83
2173 2305 4.627467 GGCATACTAGTGACACTCTGTTTG 59.373 45.833 12.39 16.63 0.00 2.93
2174 2306 4.528596 AGGCATACTAGTGACACTCTGTTT 59.471 41.667 12.39 5.23 0.00 2.83
2175 2307 4.090090 AGGCATACTAGTGACACTCTGTT 58.910 43.478 12.39 0.00 0.00 3.16
2176 2308 3.697045 GAGGCATACTAGTGACACTCTGT 59.303 47.826 12.39 14.35 0.00 3.41
2177 2309 3.951037 AGAGGCATACTAGTGACACTCTG 59.049 47.826 12.39 9.04 33.23 3.35
2178 2310 4.243793 AGAGGCATACTAGTGACACTCT 57.756 45.455 12.39 10.40 0.00 3.24
2179 2311 5.127491 AGTAGAGGCATACTAGTGACACTC 58.873 45.833 12.39 8.31 34.21 3.51
2180 2312 5.118729 AGTAGAGGCATACTAGTGACACT 57.881 43.478 13.68 13.68 34.21 3.55
2181 2313 5.357314 TCAAGTAGAGGCATACTAGTGACAC 59.643 44.000 5.39 0.00 34.90 3.67
2182 2314 5.357314 GTCAAGTAGAGGCATACTAGTGACA 59.643 44.000 19.41 0.00 40.28 3.58
2183 2315 5.591067 AGTCAAGTAGAGGCATACTAGTGAC 59.409 44.000 17.97 17.97 40.57 3.67
2184 2316 5.756918 AGTCAAGTAGAGGCATACTAGTGA 58.243 41.667 5.39 2.59 34.90 3.41
2185 2317 6.293735 GCTAGTCAAGTAGAGGCATACTAGTG 60.294 46.154 5.39 0.00 38.02 2.74
2186 2318 5.766174 GCTAGTCAAGTAGAGGCATACTAGT 59.234 44.000 0.00 0.00 38.02 2.57
2187 2319 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
2188 2320 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
2189 2321 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
2190 2322 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
2191 2323 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
2192 2324 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
2193 2325 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
2194 2326 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
2195 2327 5.814764 TTAACGAGCTAGTCAAGTAGAGG 57.185 43.478 0.00 0.00 0.00 3.69
2196 2328 7.017498 TGATTAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
2197 2329 6.997239 TGATTAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
2198 2330 7.968956 TCTTTGATTAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 31.56 2.57
2199 2331 7.823665 TCTTTGATTAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 31.56 2.24
2200 2332 6.688578 TCTTTGATTAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 31.56 3.16
2201 2333 7.254252 CCATCTTTGATTAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 31.56 3.02
2202 2334 6.535150 CCATCTTTGATTAACGAGCTAGTCAA 59.465 38.462 0.00 0.00 0.00 3.18
2203 2335 6.042777 CCATCTTTGATTAACGAGCTAGTCA 58.957 40.000 0.00 0.00 0.00 3.41
2204 2336 6.043411 ACCATCTTTGATTAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
2205 2337 5.978814 ACCATCTTTGATTAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
2206 2338 6.910536 AACCATCTTTGATTAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
2207 2339 7.985184 ACATAACCATCTTTGATTAACGAGCTA 59.015 33.333 0.00 0.00 0.00 3.32
2208 2340 6.823689 ACATAACCATCTTTGATTAACGAGCT 59.176 34.615 0.00 0.00 0.00 4.09
2209 2341 7.016361 ACATAACCATCTTTGATTAACGAGC 57.984 36.000 0.00 0.00 0.00 5.03
2210 2342 9.490663 GAAACATAACCATCTTTGATTAACGAG 57.509 33.333 0.00 0.00 0.00 4.18
2211 2343 8.455682 GGAAACATAACCATCTTTGATTAACGA 58.544 33.333 0.00 0.00 0.00 3.85
2212 2344 8.458843 AGGAAACATAACCATCTTTGATTAACG 58.541 33.333 0.00 0.00 0.00 3.18
2215 2347 9.120538 GCTAGGAAACATAACCATCTTTGATTA 57.879 33.333 0.00 0.00 0.00 1.75
2216 2348 7.068716 GGCTAGGAAACATAACCATCTTTGATT 59.931 37.037 0.00 0.00 0.00 2.57
2217 2349 6.547510 GGCTAGGAAACATAACCATCTTTGAT 59.452 38.462 0.00 0.00 0.00 2.57
2218 2350 5.885912 GGCTAGGAAACATAACCATCTTTGA 59.114 40.000 0.00 0.00 0.00 2.69
2219 2351 5.652014 TGGCTAGGAAACATAACCATCTTTG 59.348 40.000 0.00 0.00 0.00 2.77
2220 2352 5.826643 TGGCTAGGAAACATAACCATCTTT 58.173 37.500 0.00 0.00 0.00 2.52
2221 2353 5.450818 TGGCTAGGAAACATAACCATCTT 57.549 39.130 0.00 0.00 0.00 2.40
2222 2354 5.653255 ATGGCTAGGAAACATAACCATCT 57.347 39.130 0.00 0.00 30.76 2.90
2223 2355 6.651225 GTCTATGGCTAGGAAACATAACCATC 59.349 42.308 0.00 0.00 37.58 3.51
2224 2356 6.101150 TGTCTATGGCTAGGAAACATAACCAT 59.899 38.462 0.00 0.00 39.62 3.55
2225 2357 5.427157 TGTCTATGGCTAGGAAACATAACCA 59.573 40.000 0.00 0.00 0.00 3.67
2226 2358 5.925509 TGTCTATGGCTAGGAAACATAACC 58.074 41.667 0.00 0.00 0.00 2.85
2227 2359 9.209175 CTTATGTCTATGGCTAGGAAACATAAC 57.791 37.037 0.00 0.00 34.77 1.89
2228 2360 8.934697 ACTTATGTCTATGGCTAGGAAACATAA 58.065 33.333 0.00 0.00 36.37 1.90
2229 2361 8.492415 ACTTATGTCTATGGCTAGGAAACATA 57.508 34.615 0.00 0.00 0.00 2.29
2230 2362 7.380423 ACTTATGTCTATGGCTAGGAAACAT 57.620 36.000 0.00 0.00 0.00 2.71
2231 2363 6.808321 ACTTATGTCTATGGCTAGGAAACA 57.192 37.500 0.00 0.00 0.00 2.83
2232 2364 7.048512 ACAACTTATGTCTATGGCTAGGAAAC 58.951 38.462 0.00 0.00 37.96 2.78
2233 2365 7.195374 ACAACTTATGTCTATGGCTAGGAAA 57.805 36.000 0.00 0.00 37.96 3.13
2234 2366 6.808321 ACAACTTATGTCTATGGCTAGGAA 57.192 37.500 0.00 0.00 37.96 3.36
2250 2382 9.430623 TGATCTCGTTAATCAAATGACAACTTA 57.569 29.630 0.00 0.00 30.37 2.24
2251 2383 8.230486 GTGATCTCGTTAATCAAATGACAACTT 58.770 33.333 0.00 0.00 35.04 2.66
2252 2384 7.148407 GGTGATCTCGTTAATCAAATGACAACT 60.148 37.037 0.00 0.00 35.04 3.16
2253 2385 6.961554 GGTGATCTCGTTAATCAAATGACAAC 59.038 38.462 0.00 0.00 35.04 3.32
2254 2386 6.878923 AGGTGATCTCGTTAATCAAATGACAA 59.121 34.615 0.00 0.00 35.04 3.18
2255 2387 6.406370 AGGTGATCTCGTTAATCAAATGACA 58.594 36.000 0.00 0.00 35.04 3.58
2256 2388 6.535150 TGAGGTGATCTCGTTAATCAAATGAC 59.465 38.462 0.00 0.00 45.32 3.06
2257 2389 6.639563 TGAGGTGATCTCGTTAATCAAATGA 58.360 36.000 0.00 0.00 45.32 2.57
2258 2390 6.908870 TGAGGTGATCTCGTTAATCAAATG 57.091 37.500 0.00 0.00 45.32 2.32
2266 2398 5.691896 TCTCCTAATGAGGTGATCTCGTTA 58.308 41.667 7.15 7.15 46.66 3.18
2268 2400 4.171878 TCTCCTAATGAGGTGATCTCGT 57.828 45.455 0.00 0.00 45.32 4.18
2269 2401 5.242615 TCATTCTCCTAATGAGGTGATCTCG 59.757 44.000 1.52 0.00 43.31 4.04
2270 2402 6.454795 GTCATTCTCCTAATGAGGTGATCTC 58.545 44.000 1.52 0.00 43.31 2.75
2271 2403 5.010516 CGTCATTCTCCTAATGAGGTGATCT 59.989 44.000 1.52 0.00 43.31 2.75
2272 2404 5.226396 CGTCATTCTCCTAATGAGGTGATC 58.774 45.833 1.52 0.00 43.31 2.92
2273 2405 5.207110 CGTCATTCTCCTAATGAGGTGAT 57.793 43.478 1.52 0.00 43.31 3.06
2274 2406 4.655762 CGTCATTCTCCTAATGAGGTGA 57.344 45.455 10.67 0.00 44.19 4.02
2277 2409 4.655762 TCACGTCATTCTCCTAATGAGG 57.344 45.455 15.22 15.22 43.94 3.86
2278 2410 6.199908 GTCAATCACGTCATTCTCCTAATGAG 59.800 42.308 0.81 0.00 42.90 2.90
2279 2411 6.042777 GTCAATCACGTCATTCTCCTAATGA 58.957 40.000 0.00 0.00 34.56 2.57
2280 2412 6.045318 AGTCAATCACGTCATTCTCCTAATG 58.955 40.000 0.00 0.00 0.00 1.90
2281 2413 6.227298 AGTCAATCACGTCATTCTCCTAAT 57.773 37.500 0.00 0.00 0.00 1.73
2282 2414 5.661056 AGTCAATCACGTCATTCTCCTAA 57.339 39.130 0.00 0.00 0.00 2.69
2283 2415 5.185056 TCAAGTCAATCACGTCATTCTCCTA 59.815 40.000 0.00 0.00 0.00 2.94
2284 2416 4.021104 TCAAGTCAATCACGTCATTCTCCT 60.021 41.667 0.00 0.00 0.00 3.69
2285 2417 4.092091 GTCAAGTCAATCACGTCATTCTCC 59.908 45.833 0.00 0.00 0.00 3.71
2286 2418 4.092091 GGTCAAGTCAATCACGTCATTCTC 59.908 45.833 0.00 0.00 0.00 2.87
2287 2419 3.997021 GGTCAAGTCAATCACGTCATTCT 59.003 43.478 0.00 0.00 0.00 2.40
2288 2420 3.125316 GGGTCAAGTCAATCACGTCATTC 59.875 47.826 0.00 0.00 0.00 2.67
2289 2421 3.074412 GGGTCAAGTCAATCACGTCATT 58.926 45.455 0.00 0.00 0.00 2.57
2290 2422 2.038426 TGGGTCAAGTCAATCACGTCAT 59.962 45.455 0.00 0.00 0.00 3.06
2291 2423 1.414550 TGGGTCAAGTCAATCACGTCA 59.585 47.619 0.00 0.00 0.00 4.35
2292 2424 2.163818 TGGGTCAAGTCAATCACGTC 57.836 50.000 0.00 0.00 0.00 4.34
2293 2425 2.859165 ATGGGTCAAGTCAATCACGT 57.141 45.000 0.00 0.00 0.00 4.49
2294 2426 2.420022 GGAATGGGTCAAGTCAATCACG 59.580 50.000 0.00 0.00 0.00 4.35
2295 2427 2.420022 CGGAATGGGTCAAGTCAATCAC 59.580 50.000 0.00 0.00 0.00 3.06
2296 2428 2.039746 ACGGAATGGGTCAAGTCAATCA 59.960 45.455 0.00 0.00 0.00 2.57
2297 2429 2.711542 ACGGAATGGGTCAAGTCAATC 58.288 47.619 0.00 0.00 0.00 2.67
2298 2430 2.879103 ACGGAATGGGTCAAGTCAAT 57.121 45.000 0.00 0.00 0.00 2.57
2299 2431 2.649531 AACGGAATGGGTCAAGTCAA 57.350 45.000 0.00 0.00 0.00 3.18
2300 2432 2.614481 GCTAACGGAATGGGTCAAGTCA 60.614 50.000 0.00 0.00 0.00 3.41
2301 2433 2.007608 GCTAACGGAATGGGTCAAGTC 58.992 52.381 0.00 0.00 0.00 3.01
2302 2434 1.628846 AGCTAACGGAATGGGTCAAGT 59.371 47.619 0.00 0.00 0.00 3.16
2303 2435 2.403252 AGCTAACGGAATGGGTCAAG 57.597 50.000 0.00 0.00 0.00 3.02
2304 2436 2.871096 AAGCTAACGGAATGGGTCAA 57.129 45.000 0.00 0.00 0.00 3.18
2305 2437 2.419574 GCTAAGCTAACGGAATGGGTCA 60.420 50.000 0.00 0.00 0.00 4.02
2306 2438 2.210961 GCTAAGCTAACGGAATGGGTC 58.789 52.381 0.00 0.00 0.00 4.46
2307 2439 1.557832 TGCTAAGCTAACGGAATGGGT 59.442 47.619 0.00 0.00 0.00 4.51
2308 2440 1.940613 GTGCTAAGCTAACGGAATGGG 59.059 52.381 0.00 0.00 0.00 4.00
2309 2441 2.866762 GAGTGCTAAGCTAACGGAATGG 59.133 50.000 0.00 0.00 0.00 3.16
2310 2442 2.535984 CGAGTGCTAAGCTAACGGAATG 59.464 50.000 0.00 0.00 0.00 2.67
2311 2443 2.426024 TCGAGTGCTAAGCTAACGGAAT 59.574 45.455 0.00 0.00 0.00 3.01
2312 2444 1.814394 TCGAGTGCTAAGCTAACGGAA 59.186 47.619 0.00 0.00 0.00 4.30
2313 2445 1.456296 TCGAGTGCTAAGCTAACGGA 58.544 50.000 0.00 0.00 0.00 4.69
2314 2446 2.386249 GATCGAGTGCTAAGCTAACGG 58.614 52.381 0.00 0.00 0.00 4.44
2315 2447 2.037649 CGATCGAGTGCTAAGCTAACG 58.962 52.381 10.26 0.00 0.00 3.18
2316 2448 3.067721 ACGATCGAGTGCTAAGCTAAC 57.932 47.619 24.34 0.00 0.00 2.34
2317 2449 3.777465 AACGATCGAGTGCTAAGCTAA 57.223 42.857 24.34 0.00 0.00 3.09
2318 2450 3.777465 AAACGATCGAGTGCTAAGCTA 57.223 42.857 24.34 0.00 0.00 3.32
2319 2451 2.656560 AAACGATCGAGTGCTAAGCT 57.343 45.000 24.34 0.00 0.00 3.74
2320 2452 3.436496 ACTAAACGATCGAGTGCTAAGC 58.564 45.455 24.34 0.00 0.00 3.09
2321 2453 6.200100 ACATACTAAACGATCGAGTGCTAAG 58.800 40.000 24.34 10.81 0.00 2.18
2322 2454 6.127810 ACATACTAAACGATCGAGTGCTAA 57.872 37.500 24.34 0.00 0.00 3.09
2323 2455 5.746307 ACATACTAAACGATCGAGTGCTA 57.254 39.130 24.34 5.62 0.00 3.49
2324 2456 4.634184 ACATACTAAACGATCGAGTGCT 57.366 40.909 24.34 4.50 0.00 4.40
2325 2457 4.548346 GCAACATACTAAACGATCGAGTGC 60.548 45.833 24.34 10.18 0.00 4.40
2326 2458 4.798907 AGCAACATACTAAACGATCGAGTG 59.201 41.667 24.34 10.96 0.00 3.51
2327 2459 4.995124 AGCAACATACTAAACGATCGAGT 58.005 39.130 24.34 17.16 0.00 4.18
2328 2460 7.494130 CAATAGCAACATACTAAACGATCGAG 58.506 38.462 24.34 11.61 0.00 4.04
2329 2461 6.074516 GCAATAGCAACATACTAAACGATCGA 60.075 38.462 24.34 0.00 41.58 3.59
2330 2462 6.065153 GCAATAGCAACATACTAAACGATCG 58.935 40.000 14.88 14.88 41.58 3.69
2331 2463 7.178712 AGCAATAGCAACATACTAAACGATC 57.821 36.000 0.00 0.00 45.49 3.69
2332 2464 7.553881 AAGCAATAGCAACATACTAAACGAT 57.446 32.000 0.00 0.00 45.49 3.73
2333 2465 6.978343 AAGCAATAGCAACATACTAAACGA 57.022 33.333 0.00 0.00 45.49 3.85
2334 2466 7.464358 AGAAAGCAATAGCAACATACTAAACG 58.536 34.615 0.00 0.00 45.49 3.60
2335 2467 9.278734 GAAGAAAGCAATAGCAACATACTAAAC 57.721 33.333 0.00 0.00 45.49 2.01
2336 2468 9.008965 TGAAGAAAGCAATAGCAACATACTAAA 57.991 29.630 0.00 0.00 45.49 1.85
2337 2469 8.560355 TGAAGAAAGCAATAGCAACATACTAA 57.440 30.769 0.00 0.00 45.49 2.24
2338 2470 8.615211 CATGAAGAAAGCAATAGCAACATACTA 58.385 33.333 0.00 0.00 45.49 1.82
2339 2471 7.337689 TCATGAAGAAAGCAATAGCAACATACT 59.662 33.333 0.00 0.00 45.49 2.12
2340 2472 7.430502 GTCATGAAGAAAGCAATAGCAACATAC 59.569 37.037 0.00 0.00 45.49 2.39
2341 2473 7.337689 AGTCATGAAGAAAGCAATAGCAACATA 59.662 33.333 0.00 0.00 45.49 2.29
2342 2474 6.152323 AGTCATGAAGAAAGCAATAGCAACAT 59.848 34.615 0.00 0.00 45.49 2.71
2343 2475 5.474532 AGTCATGAAGAAAGCAATAGCAACA 59.525 36.000 0.00 0.00 45.49 3.33
2344 2476 5.947443 AGTCATGAAGAAAGCAATAGCAAC 58.053 37.500 0.00 0.00 45.49 4.17
2345 2477 6.579666 AAGTCATGAAGAAAGCAATAGCAA 57.420 33.333 0.00 0.00 45.49 3.91
2346 2478 7.870509 ATAAGTCATGAAGAAAGCAATAGCA 57.129 32.000 0.00 0.00 45.49 3.49
2347 2479 8.830580 TGTATAAGTCATGAAGAAAGCAATAGC 58.169 33.333 0.00 0.00 42.56 2.97
2350 2482 9.182214 ACATGTATAAGTCATGAAGAAAGCAAT 57.818 29.630 11.92 0.00 43.47 3.56
2351 2483 8.565896 ACATGTATAAGTCATGAAGAAAGCAA 57.434 30.769 11.92 0.00 43.47 3.91
2352 2484 8.565896 AACATGTATAAGTCATGAAGAAAGCA 57.434 30.769 0.00 0.00 43.47 3.91
2353 2485 8.125448 GGAACATGTATAAGTCATGAAGAAAGC 58.875 37.037 0.00 0.00 43.47 3.51
2354 2486 9.388506 AGGAACATGTATAAGTCATGAAGAAAG 57.611 33.333 0.00 0.00 43.47 2.62
2357 2489 9.987272 CATAGGAACATGTATAAGTCATGAAGA 57.013 33.333 0.00 0.00 43.47 2.87
2358 2490 9.987272 TCATAGGAACATGTATAAGTCATGAAG 57.013 33.333 0.00 0.00 43.47 3.02
2359 2491 9.764363 GTCATAGGAACATGTATAAGTCATGAA 57.236 33.333 0.00 0.00 43.47 2.57
2360 2492 9.147732 AGTCATAGGAACATGTATAAGTCATGA 57.852 33.333 0.00 0.00 43.47 3.07
2372 2504 9.096160 GCATAATCTCATAGTCATAGGAACATG 57.904 37.037 0.00 0.00 0.00 3.21
2373 2505 8.819845 TGCATAATCTCATAGTCATAGGAACAT 58.180 33.333 0.00 0.00 0.00 2.71
2374 2506 8.193953 TGCATAATCTCATAGTCATAGGAACA 57.806 34.615 0.00 0.00 0.00 3.18
2375 2507 8.930760 GTTGCATAATCTCATAGTCATAGGAAC 58.069 37.037 0.00 0.00 0.00 3.62
2376 2508 8.874156 AGTTGCATAATCTCATAGTCATAGGAA 58.126 33.333 0.00 0.00 0.00 3.36
2377 2509 8.427902 AGTTGCATAATCTCATAGTCATAGGA 57.572 34.615 0.00 0.00 0.00 2.94
2378 2510 7.763528 GGAGTTGCATAATCTCATAGTCATAGG 59.236 40.741 0.00 0.00 0.00 2.57
2379 2511 7.763528 GGGAGTTGCATAATCTCATAGTCATAG 59.236 40.741 0.00 0.00 0.00 2.23
2380 2512 7.577616 CGGGAGTTGCATAATCTCATAGTCATA 60.578 40.741 0.00 0.00 0.00 2.15
2381 2513 6.471146 GGGAGTTGCATAATCTCATAGTCAT 58.529 40.000 0.00 0.00 0.00 3.06
2382 2514 5.509670 CGGGAGTTGCATAATCTCATAGTCA 60.510 44.000 0.00 0.00 0.00 3.41
2383 2515 4.926238 CGGGAGTTGCATAATCTCATAGTC 59.074 45.833 0.00 0.00 0.00 2.59
2384 2516 4.345257 ACGGGAGTTGCATAATCTCATAGT 59.655 41.667 0.00 0.00 43.33 2.12
2385 2517 4.887748 ACGGGAGTTGCATAATCTCATAG 58.112 43.478 0.00 0.00 43.33 2.23
2386 2518 4.955811 ACGGGAGTTGCATAATCTCATA 57.044 40.909 0.00 0.00 43.33 2.15
2387 2519 3.845781 ACGGGAGTTGCATAATCTCAT 57.154 42.857 0.00 0.00 43.33 2.90
2405 2537 2.159327 AAGTGTTCCTCCGGTAAACG 57.841 50.000 0.00 0.00 43.80 3.60
2406 2538 3.002965 CACAAAGTGTTCCTCCGGTAAAC 59.997 47.826 0.00 5.38 0.00 2.01
2407 2539 3.207778 CACAAAGTGTTCCTCCGGTAAA 58.792 45.455 0.00 0.00 0.00 2.01
2408 2540 2.171027 ACACAAAGTGTTCCTCCGGTAA 59.829 45.455 0.00 0.00 45.08 2.85
2409 2541 1.764134 ACACAAAGTGTTCCTCCGGTA 59.236 47.619 0.00 0.00 45.08 4.02
2410 2542 0.544697 ACACAAAGTGTTCCTCCGGT 59.455 50.000 0.00 0.00 45.08 5.28
2411 2543 0.944386 CACACAAAGTGTTCCTCCGG 59.056 55.000 0.00 0.00 45.08 5.14
2412 2544 0.307760 GCACACAAAGTGTTCCTCCG 59.692 55.000 0.00 0.00 45.08 4.63
2413 2545 1.680338 AGCACACAAAGTGTTCCTCC 58.320 50.000 0.00 0.00 45.08 4.30
2414 2546 2.548480 GGTAGCACACAAAGTGTTCCTC 59.452 50.000 0.00 0.00 45.08 3.71
2415 2547 2.092646 TGGTAGCACACAAAGTGTTCCT 60.093 45.455 0.00 3.24 45.08 3.36
2416 2548 2.294074 TGGTAGCACACAAAGTGTTCC 58.706 47.619 0.00 2.65 45.08 3.62
2417 2549 4.102649 GTTTGGTAGCACACAAAGTGTTC 58.897 43.478 6.34 0.00 45.08 3.18
2418 2550 3.426963 CGTTTGGTAGCACACAAAGTGTT 60.427 43.478 11.43 0.00 45.08 3.32
2421 2553 2.353579 GACGTTTGGTAGCACACAAAGT 59.646 45.455 11.43 4.36 37.27 2.66
2422 2554 2.353269 TGACGTTTGGTAGCACACAAAG 59.647 45.455 11.43 1.31 37.27 2.77
2423 2555 2.096174 GTGACGTTTGGTAGCACACAAA 59.904 45.455 11.43 0.00 34.48 2.83
2424 2556 1.666700 GTGACGTTTGGTAGCACACAA 59.333 47.619 11.43 0.00 0.00 3.33
2425 2557 1.292061 GTGACGTTTGGTAGCACACA 58.708 50.000 11.43 0.00 0.00 3.72
2426 2558 1.292061 TGTGACGTTTGGTAGCACAC 58.708 50.000 1.04 1.04 34.85 3.82
2427 2559 1.666700 GTTGTGACGTTTGGTAGCACA 59.333 47.619 0.00 0.34 37.66 4.57
2428 2560 1.332552 CGTTGTGACGTTTGGTAGCAC 60.333 52.381 0.00 0.00 44.08 4.40
2429 2561 0.931702 CGTTGTGACGTTTGGTAGCA 59.068 50.000 0.00 0.00 44.08 3.49
2430 2562 3.721466 CGTTGTGACGTTTGGTAGC 57.279 52.632 0.00 0.00 44.08 3.58
2440 2572 1.569708 TCACCCGTTTACGTTGTGAC 58.430 50.000 16.06 0.00 41.19 3.67
2441 2573 2.529780 ATCACCCGTTTACGTTGTGA 57.470 45.000 19.86 19.86 45.92 3.58
2442 2574 4.932268 ATAATCACCCGTTTACGTTGTG 57.068 40.909 12.95 12.95 39.77 3.33
2443 2575 6.092533 CCTTTATAATCACCCGTTTACGTTGT 59.907 38.462 0.00 0.00 37.74 3.32
2444 2576 6.480285 CCTTTATAATCACCCGTTTACGTTG 58.520 40.000 0.00 0.00 37.74 4.10
2445 2577 6.667007 CCTTTATAATCACCCGTTTACGTT 57.333 37.500 0.00 0.00 37.74 3.99


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.