Multiple sequence alignment - TraesCS5D01G441100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G441100 chr5D 100.000 1844 0 0 807 2650 494033067 494034910 0.000000e+00 3406.0
1 TraesCS5D01G441100 chr5D 89.922 1161 76 25 807 1937 493997274 493998423 0.000000e+00 1458.0
2 TraesCS5D01G441100 chr5D 100.000 488 0 0 1 488 494032261 494032748 0.000000e+00 902.0
3 TraesCS5D01G441100 chr5D 94.045 487 19 7 1 479 465909720 465909236 0.000000e+00 730.0
4 TraesCS5D01G441100 chr5D 90.000 570 49 5 807 1369 494041789 494042357 0.000000e+00 730.0
5 TraesCS5D01G441100 chr5D 90.274 329 29 2 1029 1357 494052846 494053171 6.780000e-116 427.0
6 TraesCS5D01G441100 chr5D 80.172 116 19 3 807 919 493835880 493835766 1.690000e-12 84.2
7 TraesCS5D01G441100 chr5B 88.672 1333 88 13 807 2088 610023092 610021772 0.000000e+00 1567.0
8 TraesCS5D01G441100 chr5B 86.145 1328 104 40 807 2104 610086001 610084724 0.000000e+00 1360.0
9 TraesCS5D01G441100 chr5B 91.272 928 55 9 807 1710 610082030 610081105 0.000000e+00 1242.0
10 TraesCS5D01G441100 chr5B 91.506 518 41 2 855 1369 610007917 610007400 0.000000e+00 710.0
11 TraesCS5D01G441100 chr5B 89.888 534 48 3 2114 2646 610079456 610078928 0.000000e+00 682.0
12 TraesCS5D01G441100 chr5B 87.215 438 41 9 2209 2636 610017242 610016810 3.970000e-133 484.0
13 TraesCS5D01G441100 chr5B 82.386 352 29 11 1693 2034 610080543 610080215 2.600000e-70 276.0
14 TraesCS5D01G441100 chr5B 91.124 169 13 2 2114 2281 610084632 610084465 7.380000e-56 228.0
15 TraesCS5D01G441100 chr5B 89.726 146 14 1 2264 2409 610084450 610084306 4.500000e-43 185.0
16 TraesCS5D01G441100 chr5A 89.362 1034 64 21 910 1899 616982590 616981559 0.000000e+00 1258.0
17 TraesCS5D01G441100 chr5A 93.367 392 24 1 807 1196 616979338 616978947 1.770000e-161 579.0
18 TraesCS5D01G441100 chr5A 90.274 329 29 2 1029 1357 616919899 616919574 6.780000e-116 427.0
19 TraesCS5D01G441100 chr6D 95.473 486 19 3 1 486 78026919 78027401 0.000000e+00 773.0
20 TraesCS5D01G441100 chr1D 95.238 483 17 6 1 479 332677671 332678151 0.000000e+00 760.0
21 TraesCS5D01G441100 chr7D 94.534 494 19 8 1 488 3908594 3908103 0.000000e+00 756.0
22 TraesCS5D01G441100 chr2D 93.952 496 20 9 1 488 406976523 406977016 0.000000e+00 741.0
23 TraesCS5D01G441100 chr7B 93.890 491 25 4 1 488 749553521 749554009 0.000000e+00 736.0
24 TraesCS5D01G441100 chr1A 93.265 490 27 4 1 488 508560068 508559583 0.000000e+00 717.0
25 TraesCS5D01G441100 chr2A 94.421 466 22 3 1 464 698677207 698677670 0.000000e+00 713.0
26 TraesCS5D01G441100 chr1B 93.075 491 26 6 1 488 645258121 645257636 0.000000e+00 712.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G441100 chr5D 494032261 494034910 2649 False 2154.000000 3406 100.0000 1 2650 2 chr5D.!!$F4 2649
1 TraesCS5D01G441100 chr5D 493997274 493998423 1149 False 1458.000000 1458 89.9220 807 1937 1 chr5D.!!$F1 1130
2 TraesCS5D01G441100 chr5D 494041789 494042357 568 False 730.000000 730 90.0000 807 1369 1 chr5D.!!$F2 562
3 TraesCS5D01G441100 chr5B 610021772 610023092 1320 True 1567.000000 1567 88.6720 807 2088 1 chr5B.!!$R3 1281
4 TraesCS5D01G441100 chr5B 610007400 610007917 517 True 710.000000 710 91.5060 855 1369 1 chr5B.!!$R1 514
5 TraesCS5D01G441100 chr5B 610078928 610086001 7073 True 662.166667 1360 88.4235 807 2646 6 chr5B.!!$R4 1839
6 TraesCS5D01G441100 chr5A 616978947 616982590 3643 True 918.500000 1258 91.3645 807 1899 2 chr5A.!!$R2 1092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 4948 0.033366 CCCCAACCCAAGAAAAAGCG 59.967 55.0 0.0 0.0 0.0 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2245 8062 0.105039 CCCAGAGGTTATCGCCTGTC 59.895 60.0 0.0 0.0 39.34 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.492090 GTCTGCGAGATCGTGGCT 59.508 61.111 3.94 0.00 42.22 4.75
18 19 1.587613 GTCTGCGAGATCGTGGCTC 60.588 63.158 3.94 0.00 42.22 4.70
19 20 2.046285 TCTGCGAGATCGTGGCTCA 61.046 57.895 3.94 0.00 42.22 4.26
20 21 1.588403 CTGCGAGATCGTGGCTCAG 60.588 63.158 3.94 0.00 42.22 3.35
21 22 2.959071 GCGAGATCGTGGCTCAGC 60.959 66.667 3.94 0.00 42.22 4.26
34 35 4.488136 TCAGCCATGCGCCGGAAT 62.488 61.111 16.62 1.57 38.78 3.01
35 36 4.260355 CAGCCATGCGCCGGAATG 62.260 66.667 16.62 7.76 38.78 2.67
39 40 3.585990 CATGCGCCGGAATGGGTC 61.586 66.667 5.05 0.00 38.63 4.46
40 41 3.797353 ATGCGCCGGAATGGGTCT 61.797 61.111 5.05 0.00 38.63 3.85
41 42 4.776322 TGCGCCGGAATGGGTCTG 62.776 66.667 5.05 0.00 38.63 3.51
42 43 4.467084 GCGCCGGAATGGGTCTGA 62.467 66.667 5.05 0.00 38.63 3.27
43 44 2.505982 CGCCGGAATGGGTCTGAT 59.494 61.111 5.05 0.00 38.63 2.90
44 45 1.153168 CGCCGGAATGGGTCTGATT 60.153 57.895 5.05 0.00 38.63 2.57
45 46 0.748005 CGCCGGAATGGGTCTGATTT 60.748 55.000 5.05 0.00 38.63 2.17
46 47 1.474330 GCCGGAATGGGTCTGATTTT 58.526 50.000 5.05 0.00 38.63 1.82
47 48 1.405463 GCCGGAATGGGTCTGATTTTC 59.595 52.381 5.05 0.00 38.63 2.29
48 49 2.722094 CCGGAATGGGTCTGATTTTCA 58.278 47.619 0.00 0.00 34.07 2.69
49 50 3.290710 CCGGAATGGGTCTGATTTTCAT 58.709 45.455 0.00 0.00 34.07 2.57
50 51 3.316308 CCGGAATGGGTCTGATTTTCATC 59.684 47.826 0.00 0.00 34.07 2.92
51 52 3.316308 CGGAATGGGTCTGATTTTCATCC 59.684 47.826 0.00 0.00 34.07 3.51
52 53 3.316308 GGAATGGGTCTGATTTTCATCCG 59.684 47.826 0.00 0.00 0.00 4.18
53 54 3.931907 ATGGGTCTGATTTTCATCCGA 57.068 42.857 0.00 0.00 0.00 4.55
54 55 3.712016 TGGGTCTGATTTTCATCCGAA 57.288 42.857 0.00 0.00 0.00 4.30
55 56 3.609853 TGGGTCTGATTTTCATCCGAAG 58.390 45.455 0.00 0.00 31.28 3.79
56 57 2.356069 GGGTCTGATTTTCATCCGAAGC 59.644 50.000 0.00 0.00 31.28 3.86
57 58 2.356069 GGTCTGATTTTCATCCGAAGCC 59.644 50.000 0.00 0.00 31.28 4.35
58 59 2.030946 GTCTGATTTTCATCCGAAGCCG 59.969 50.000 0.00 0.00 31.28 5.52
69 70 4.851179 GAAGCCGGGTTAGCGGGG 62.851 72.222 20.79 0.00 34.64 5.73
74 75 4.073200 CGGGTTAGCGGGGTCGTT 62.073 66.667 0.00 0.00 38.89 3.85
75 76 2.709883 CGGGTTAGCGGGGTCGTTA 61.710 63.158 0.00 0.00 38.89 3.18
76 77 1.825341 GGGTTAGCGGGGTCGTTAT 59.175 57.895 0.00 0.00 38.89 1.89
77 78 0.249615 GGGTTAGCGGGGTCGTTATC 60.250 60.000 0.00 0.00 38.89 1.75
78 79 0.249615 GGTTAGCGGGGTCGTTATCC 60.250 60.000 0.00 0.00 35.75 2.59
79 80 0.749049 GTTAGCGGGGTCGTTATCCT 59.251 55.000 0.00 0.00 38.89 3.24
80 81 1.956477 GTTAGCGGGGTCGTTATCCTA 59.044 52.381 0.00 0.00 38.89 2.94
81 82 1.609208 TAGCGGGGTCGTTATCCTAC 58.391 55.000 0.00 0.00 38.89 3.18
82 83 0.106318 AGCGGGGTCGTTATCCTACT 60.106 55.000 0.00 0.00 38.89 2.57
83 84 0.313357 GCGGGGTCGTTATCCTACTC 59.687 60.000 0.00 0.00 38.89 2.59
84 85 1.683943 CGGGGTCGTTATCCTACTCA 58.316 55.000 0.00 0.00 0.00 3.41
85 86 2.026641 CGGGGTCGTTATCCTACTCAA 58.973 52.381 0.00 0.00 0.00 3.02
86 87 2.626743 CGGGGTCGTTATCCTACTCAAT 59.373 50.000 0.00 0.00 0.00 2.57
87 88 3.552273 CGGGGTCGTTATCCTACTCAATG 60.552 52.174 0.00 0.00 0.00 2.82
88 89 3.244112 GGGGTCGTTATCCTACTCAATGG 60.244 52.174 0.00 0.00 0.00 3.16
89 90 3.640029 GGGTCGTTATCCTACTCAATGGA 59.360 47.826 0.00 0.00 36.72 3.41
90 91 4.283722 GGGTCGTTATCCTACTCAATGGAT 59.716 45.833 0.00 0.00 44.42 3.41
91 92 5.471257 GGTCGTTATCCTACTCAATGGATC 58.529 45.833 0.00 0.00 41.67 3.36
92 93 5.010719 GGTCGTTATCCTACTCAATGGATCA 59.989 44.000 0.00 0.00 41.67 2.92
93 94 5.921408 GTCGTTATCCTACTCAATGGATCAC 59.079 44.000 0.00 0.00 41.67 3.06
94 95 5.010719 TCGTTATCCTACTCAATGGATCACC 59.989 44.000 0.00 0.00 41.67 4.02
95 96 5.011125 CGTTATCCTACTCAATGGATCACCT 59.989 44.000 0.00 0.00 41.67 4.00
96 97 6.459923 GTTATCCTACTCAATGGATCACCTC 58.540 44.000 0.00 0.00 41.67 3.85
97 98 2.959030 TCCTACTCAATGGATCACCTCG 59.041 50.000 0.00 0.00 37.04 4.63
98 99 2.695666 CCTACTCAATGGATCACCTCGT 59.304 50.000 0.00 0.00 37.04 4.18
99 100 3.133003 CCTACTCAATGGATCACCTCGTT 59.867 47.826 0.00 0.00 37.04 3.85
100 101 3.252974 ACTCAATGGATCACCTCGTTC 57.747 47.619 0.00 0.00 37.04 3.95
101 102 2.093447 ACTCAATGGATCACCTCGTTCC 60.093 50.000 0.00 0.00 37.04 3.62
102 103 1.209504 TCAATGGATCACCTCGTTCCC 59.790 52.381 0.00 0.00 33.10 3.97
103 104 1.065491 CAATGGATCACCTCGTTCCCA 60.065 52.381 0.00 0.00 33.10 4.37
104 105 1.511613 ATGGATCACCTCGTTCCCAT 58.488 50.000 0.00 0.00 33.10 4.00
105 106 2.168458 TGGATCACCTCGTTCCCATA 57.832 50.000 0.00 0.00 33.10 2.74
106 107 2.689658 TGGATCACCTCGTTCCCATAT 58.310 47.619 0.00 0.00 33.10 1.78
107 108 2.368548 TGGATCACCTCGTTCCCATATG 59.631 50.000 0.00 0.00 33.10 1.78
108 109 2.289694 GGATCACCTCGTTCCCATATGG 60.290 54.545 15.41 15.41 0.00 2.74
109 110 0.468226 TCACCTCGTTCCCATATGGC 59.532 55.000 16.97 1.87 0.00 4.40
110 111 0.180171 CACCTCGTTCCCATATGGCA 59.820 55.000 16.97 0.00 0.00 4.92
111 112 0.180406 ACCTCGTTCCCATATGGCAC 59.820 55.000 16.97 13.39 0.00 5.01
112 113 0.535102 CCTCGTTCCCATATGGCACC 60.535 60.000 16.97 4.60 0.00 5.01
113 114 0.469917 CTCGTTCCCATATGGCACCT 59.530 55.000 16.97 0.00 0.00 4.00
114 115 0.468226 TCGTTCCCATATGGCACCTC 59.532 55.000 16.97 3.79 0.00 3.85
115 116 0.469917 CGTTCCCATATGGCACCTCT 59.530 55.000 16.97 0.00 0.00 3.69
116 117 1.691976 CGTTCCCATATGGCACCTCTA 59.308 52.381 16.97 0.00 0.00 2.43
117 118 2.548067 CGTTCCCATATGGCACCTCTAC 60.548 54.545 16.97 0.00 0.00 2.59
118 119 1.729586 TCCCATATGGCACCTCTACC 58.270 55.000 16.97 0.00 0.00 3.18
119 120 1.223077 TCCCATATGGCACCTCTACCT 59.777 52.381 16.97 0.00 0.00 3.08
120 121 1.625818 CCCATATGGCACCTCTACCTC 59.374 57.143 16.97 0.00 0.00 3.85
121 122 2.614259 CCATATGGCACCTCTACCTCT 58.386 52.381 9.29 0.00 0.00 3.69
122 123 2.301296 CCATATGGCACCTCTACCTCTG 59.699 54.545 9.29 0.00 0.00 3.35
123 124 1.414158 TATGGCACCTCTACCTCTGC 58.586 55.000 0.00 0.00 0.00 4.26
124 125 1.680522 ATGGCACCTCTACCTCTGCG 61.681 60.000 0.00 0.00 0.00 5.18
125 126 2.496817 GCACCTCTACCTCTGCGG 59.503 66.667 0.00 0.00 39.35 5.69
126 127 3.082579 GCACCTCTACCTCTGCGGG 62.083 68.421 0.00 0.00 36.97 6.13
127 128 2.042843 ACCTCTACCTCTGCGGGG 60.043 66.667 0.00 0.00 36.97 5.73
128 129 2.840102 CCTCTACCTCTGCGGGGG 60.840 72.222 10.94 10.94 36.97 5.40
143 144 4.966787 GGGGCTGTTGGTTGGCGA 62.967 66.667 0.00 0.00 0.00 5.54
144 145 3.670377 GGGCTGTTGGTTGGCGAC 61.670 66.667 0.00 0.00 0.00 5.19
168 169 4.065110 GCCAACGTTCAAGGCTCT 57.935 55.556 18.21 0.00 44.92 4.09
169 170 2.331265 GCCAACGTTCAAGGCTCTT 58.669 52.632 18.21 0.00 44.92 2.85
170 171 0.238553 GCCAACGTTCAAGGCTCTTC 59.761 55.000 18.21 0.00 44.92 2.87
171 172 1.884235 CCAACGTTCAAGGCTCTTCT 58.116 50.000 0.00 0.00 0.00 2.85
172 173 1.801178 CCAACGTTCAAGGCTCTTCTC 59.199 52.381 0.00 0.00 0.00 2.87
173 174 1.801178 CAACGTTCAAGGCTCTTCTCC 59.199 52.381 0.00 0.00 0.00 3.71
174 175 1.343069 ACGTTCAAGGCTCTTCTCCT 58.657 50.000 0.00 0.00 34.90 3.69
175 176 1.694696 ACGTTCAAGGCTCTTCTCCTT 59.305 47.619 0.00 0.00 44.31 3.36
180 181 2.197283 AAGGCTCTTCTCCTTGCTTG 57.803 50.000 0.00 0.00 42.03 4.01
181 182 0.327591 AGGCTCTTCTCCTTGCTTGG 59.672 55.000 0.00 0.00 0.00 3.61
182 183 0.037447 GGCTCTTCTCCTTGCTTGGT 59.963 55.000 0.00 0.00 0.00 3.67
183 184 1.447945 GCTCTTCTCCTTGCTTGGTC 58.552 55.000 0.00 0.00 0.00 4.02
184 185 1.719600 CTCTTCTCCTTGCTTGGTCG 58.280 55.000 0.00 0.00 0.00 4.79
185 186 0.321671 TCTTCTCCTTGCTTGGTCGG 59.678 55.000 0.00 0.00 0.00 4.79
186 187 0.321671 CTTCTCCTTGCTTGGTCGGA 59.678 55.000 0.00 0.00 0.00 4.55
187 188 0.984230 TTCTCCTTGCTTGGTCGGAT 59.016 50.000 0.00 0.00 0.00 4.18
188 189 0.250234 TCTCCTTGCTTGGTCGGATG 59.750 55.000 0.00 0.00 0.00 3.51
189 190 0.250234 CTCCTTGCTTGGTCGGATGA 59.750 55.000 0.00 0.00 0.00 2.92
190 191 0.690192 TCCTTGCTTGGTCGGATGAA 59.310 50.000 0.00 0.00 0.00 2.57
191 192 1.089920 CCTTGCTTGGTCGGATGAAG 58.910 55.000 0.00 0.00 0.00 3.02
192 193 1.089920 CTTGCTTGGTCGGATGAAGG 58.910 55.000 0.00 0.00 0.00 3.46
193 194 0.400213 TTGCTTGGTCGGATGAAGGT 59.600 50.000 0.00 0.00 0.00 3.50
194 195 0.321564 TGCTTGGTCGGATGAAGGTG 60.322 55.000 0.00 0.00 0.00 4.00
195 196 0.321653 GCTTGGTCGGATGAAGGTGT 60.322 55.000 0.00 0.00 0.00 4.16
196 197 1.066430 GCTTGGTCGGATGAAGGTGTA 60.066 52.381 0.00 0.00 0.00 2.90
197 198 2.614481 GCTTGGTCGGATGAAGGTGTAA 60.614 50.000 0.00 0.00 0.00 2.41
198 199 3.262420 CTTGGTCGGATGAAGGTGTAAG 58.738 50.000 0.00 0.00 0.00 2.34
199 200 2.253610 TGGTCGGATGAAGGTGTAAGT 58.746 47.619 0.00 0.00 0.00 2.24
200 201 2.635915 TGGTCGGATGAAGGTGTAAGTT 59.364 45.455 0.00 0.00 0.00 2.66
201 202 3.000727 GGTCGGATGAAGGTGTAAGTTG 58.999 50.000 0.00 0.00 0.00 3.16
202 203 3.306502 GGTCGGATGAAGGTGTAAGTTGA 60.307 47.826 0.00 0.00 0.00 3.18
203 204 3.927142 GTCGGATGAAGGTGTAAGTTGAG 59.073 47.826 0.00 0.00 0.00 3.02
204 205 3.056107 TCGGATGAAGGTGTAAGTTGAGG 60.056 47.826 0.00 0.00 0.00 3.86
205 206 3.306780 CGGATGAAGGTGTAAGTTGAGGT 60.307 47.826 0.00 0.00 0.00 3.85
206 207 4.254492 GGATGAAGGTGTAAGTTGAGGTC 58.746 47.826 0.00 0.00 0.00 3.85
207 208 3.764237 TGAAGGTGTAAGTTGAGGTCC 57.236 47.619 0.00 0.00 0.00 4.46
208 209 3.314693 TGAAGGTGTAAGTTGAGGTCCT 58.685 45.455 0.00 0.00 0.00 3.85
209 210 3.323979 TGAAGGTGTAAGTTGAGGTCCTC 59.676 47.826 12.40 12.40 0.00 3.71
210 211 2.258109 AGGTGTAAGTTGAGGTCCTCC 58.742 52.381 16.60 1.62 0.00 4.30
219 220 4.143740 AGGTCCTCCTCCTTGCTG 57.856 61.111 0.00 0.00 40.58 4.41
220 221 1.614824 AGGTCCTCCTCCTTGCTGG 60.615 63.158 0.00 0.00 40.58 4.85
221 222 1.920835 GGTCCTCCTCCTTGCTGGT 60.921 63.158 0.00 0.00 37.07 4.00
222 223 1.492993 GGTCCTCCTCCTTGCTGGTT 61.493 60.000 0.00 0.00 37.07 3.67
223 224 0.322008 GTCCTCCTCCTTGCTGGTTG 60.322 60.000 0.00 0.00 37.07 3.77
224 225 0.768221 TCCTCCTCCTTGCTGGTTGT 60.768 55.000 0.00 0.00 37.07 3.32
225 226 0.607489 CCTCCTCCTTGCTGGTTGTG 60.607 60.000 0.00 0.00 37.07 3.33
226 227 1.228245 TCCTCCTTGCTGGTTGTGC 60.228 57.895 0.00 0.00 37.07 4.57
227 228 1.228367 CCTCCTTGCTGGTTGTGCT 60.228 57.895 0.00 0.00 37.07 4.40
228 229 1.521450 CCTCCTTGCTGGTTGTGCTG 61.521 60.000 0.00 0.00 37.07 4.41
229 230 0.535780 CTCCTTGCTGGTTGTGCTGA 60.536 55.000 0.00 0.00 37.07 4.26
230 231 0.111061 TCCTTGCTGGTTGTGCTGAT 59.889 50.000 0.00 0.00 37.07 2.90
231 232 0.242825 CCTTGCTGGTTGTGCTGATG 59.757 55.000 0.00 0.00 0.00 3.07
232 233 1.241165 CTTGCTGGTTGTGCTGATGA 58.759 50.000 0.00 0.00 0.00 2.92
233 234 1.816835 CTTGCTGGTTGTGCTGATGAT 59.183 47.619 0.00 0.00 0.00 2.45
234 235 2.785540 TGCTGGTTGTGCTGATGATA 57.214 45.000 0.00 0.00 0.00 2.15
235 236 3.286329 TGCTGGTTGTGCTGATGATAT 57.714 42.857 0.00 0.00 0.00 1.63
236 237 3.208594 TGCTGGTTGTGCTGATGATATC 58.791 45.455 0.00 0.00 0.00 1.63
237 238 3.118149 TGCTGGTTGTGCTGATGATATCT 60.118 43.478 3.98 0.00 0.00 1.98
238 239 3.250280 GCTGGTTGTGCTGATGATATCTG 59.750 47.826 3.98 0.00 0.00 2.90
239 240 3.812262 TGGTTGTGCTGATGATATCTGG 58.188 45.455 3.98 0.00 0.00 3.86
240 241 3.455543 TGGTTGTGCTGATGATATCTGGA 59.544 43.478 3.98 0.00 0.00 3.86
241 242 4.080413 TGGTTGTGCTGATGATATCTGGAA 60.080 41.667 3.98 0.00 31.07 3.53
242 243 5.068636 GGTTGTGCTGATGATATCTGGAAT 58.931 41.667 3.98 0.00 31.07 3.01
243 244 5.048921 GGTTGTGCTGATGATATCTGGAATG 60.049 44.000 3.98 0.00 31.07 2.67
244 245 4.648651 TGTGCTGATGATATCTGGAATGG 58.351 43.478 3.98 0.00 31.07 3.16
245 246 3.439476 GTGCTGATGATATCTGGAATGGC 59.561 47.826 3.98 0.88 31.07 4.40
246 247 2.676839 GCTGATGATATCTGGAATGGCG 59.323 50.000 3.98 0.00 0.00 5.69
247 248 3.268330 CTGATGATATCTGGAATGGCGG 58.732 50.000 3.98 0.00 0.00 6.13
248 249 2.639347 TGATGATATCTGGAATGGCGGT 59.361 45.455 3.98 0.00 0.00 5.68
249 250 3.837731 TGATGATATCTGGAATGGCGGTA 59.162 43.478 3.98 0.00 0.00 4.02
250 251 3.961480 TGATATCTGGAATGGCGGTAG 57.039 47.619 3.98 0.00 0.00 3.18
251 252 2.567169 TGATATCTGGAATGGCGGTAGG 59.433 50.000 3.98 0.00 0.00 3.18
252 253 2.097110 TATCTGGAATGGCGGTAGGT 57.903 50.000 0.00 0.00 0.00 3.08
253 254 0.469917 ATCTGGAATGGCGGTAGGTG 59.530 55.000 0.00 0.00 0.00 4.00
254 255 1.153168 CTGGAATGGCGGTAGGTGG 60.153 63.158 0.00 0.00 0.00 4.61
255 256 1.910580 CTGGAATGGCGGTAGGTGGT 61.911 60.000 0.00 0.00 0.00 4.16
256 257 1.451387 GGAATGGCGGTAGGTGGTG 60.451 63.158 0.00 0.00 0.00 4.17
257 258 1.298667 GAATGGCGGTAGGTGGTGT 59.701 57.895 0.00 0.00 0.00 4.16
258 259 0.322187 GAATGGCGGTAGGTGGTGTT 60.322 55.000 0.00 0.00 0.00 3.32
259 260 0.608035 AATGGCGGTAGGTGGTGTTG 60.608 55.000 0.00 0.00 0.00 3.33
260 261 2.359478 GGCGGTAGGTGGTGTTGG 60.359 66.667 0.00 0.00 0.00 3.77
261 262 2.428622 GCGGTAGGTGGTGTTGGT 59.571 61.111 0.00 0.00 0.00 3.67
262 263 1.964373 GCGGTAGGTGGTGTTGGTG 60.964 63.158 0.00 0.00 0.00 4.17
263 264 1.964373 CGGTAGGTGGTGTTGGTGC 60.964 63.158 0.00 0.00 0.00 5.01
264 265 1.964373 GGTAGGTGGTGTTGGTGCG 60.964 63.158 0.00 0.00 0.00 5.34
265 266 1.227734 GTAGGTGGTGTTGGTGCGT 60.228 57.895 0.00 0.00 0.00 5.24
266 267 1.070105 TAGGTGGTGTTGGTGCGTC 59.930 57.895 0.00 0.00 0.00 5.19
267 268 2.386064 TAGGTGGTGTTGGTGCGTCC 62.386 60.000 0.00 0.00 0.00 4.79
268 269 2.515057 GTGGTGTTGGTGCGTCCA 60.515 61.111 0.00 0.00 45.60 4.02
279 280 2.184322 GCGTCCAGCTTCGGATCA 59.816 61.111 0.00 0.00 44.04 2.92
280 281 1.227380 GCGTCCAGCTTCGGATCAT 60.227 57.895 0.00 0.00 44.04 2.45
281 282 1.218230 GCGTCCAGCTTCGGATCATC 61.218 60.000 0.00 0.00 44.04 2.92
282 283 0.936764 CGTCCAGCTTCGGATCATCG 60.937 60.000 0.00 0.00 37.41 3.84
283 284 0.385751 GTCCAGCTTCGGATCATCGA 59.614 55.000 0.00 0.00 37.41 3.59
284 285 1.111277 TCCAGCTTCGGATCATCGAA 58.889 50.000 6.63 6.63 45.34 3.71
285 286 1.480545 TCCAGCTTCGGATCATCGAAA 59.519 47.619 7.95 0.00 46.49 3.46
286 287 1.863454 CCAGCTTCGGATCATCGAAAG 59.137 52.381 7.95 4.56 46.49 2.62
287 288 1.863454 CAGCTTCGGATCATCGAAAGG 59.137 52.381 7.95 0.33 46.49 3.11
288 289 0.583917 GCTTCGGATCATCGAAAGGC 59.416 55.000 7.95 5.71 46.49 4.35
289 290 1.221414 CTTCGGATCATCGAAAGGCC 58.779 55.000 0.00 0.00 46.49 5.19
290 291 0.830648 TTCGGATCATCGAAAGGCCT 59.169 50.000 0.00 0.00 44.70 5.19
291 292 0.830648 TCGGATCATCGAAAGGCCTT 59.169 50.000 13.78 13.78 36.12 4.35
292 293 1.202533 TCGGATCATCGAAAGGCCTTC 60.203 52.381 20.79 11.48 36.12 3.46
293 294 1.202580 CGGATCATCGAAAGGCCTTCT 60.203 52.381 20.79 9.27 31.20 2.85
294 295 2.743183 CGGATCATCGAAAGGCCTTCTT 60.743 50.000 20.79 3.24 37.28 2.52
295 296 2.875317 GGATCATCGAAAGGCCTTCTTC 59.125 50.000 20.79 13.00 33.94 2.87
296 297 3.432890 GGATCATCGAAAGGCCTTCTTCT 60.433 47.826 20.79 1.84 33.94 2.85
297 298 2.977914 TCATCGAAAGGCCTTCTTCTG 58.022 47.619 20.79 14.29 33.94 3.02
298 299 2.303022 TCATCGAAAGGCCTTCTTCTGT 59.697 45.455 20.79 0.44 33.94 3.41
299 300 2.169832 TCGAAAGGCCTTCTTCTGTG 57.830 50.000 20.79 1.38 33.94 3.66
300 301 0.519077 CGAAAGGCCTTCTTCTGTGC 59.481 55.000 20.79 0.00 33.94 4.57
301 302 0.884514 GAAAGGCCTTCTTCTGTGCC 59.115 55.000 20.79 0.00 44.35 5.01
302 303 0.540597 AAAGGCCTTCTTCTGTGCCC 60.541 55.000 20.79 0.00 45.14 5.36
303 304 1.430369 AAGGCCTTCTTCTGTGCCCT 61.430 55.000 13.78 0.00 45.14 5.19
304 305 1.075659 GGCCTTCTTCTGTGCCCTT 59.924 57.895 0.00 0.00 37.94 3.95
305 306 0.540597 GGCCTTCTTCTGTGCCCTTT 60.541 55.000 0.00 0.00 37.94 3.11
306 307 0.884514 GCCTTCTTCTGTGCCCTTTC 59.115 55.000 0.00 0.00 0.00 2.62
307 308 1.539157 CCTTCTTCTGTGCCCTTTCC 58.461 55.000 0.00 0.00 0.00 3.13
308 309 1.074566 CCTTCTTCTGTGCCCTTTCCT 59.925 52.381 0.00 0.00 0.00 3.36
309 310 2.489802 CCTTCTTCTGTGCCCTTTCCTT 60.490 50.000 0.00 0.00 0.00 3.36
310 311 2.568623 TCTTCTGTGCCCTTTCCTTC 57.431 50.000 0.00 0.00 0.00 3.46
311 312 1.160137 CTTCTGTGCCCTTTCCTTCG 58.840 55.000 0.00 0.00 0.00 3.79
312 313 0.250727 TTCTGTGCCCTTTCCTTCGG 60.251 55.000 0.00 0.00 0.00 4.30
313 314 2.282180 TGTGCCCTTTCCTTCGGC 60.282 61.111 0.00 0.00 43.32 5.54
314 315 3.431725 GTGCCCTTTCCTTCGGCG 61.432 66.667 0.00 0.00 46.12 6.46
315 316 4.715523 TGCCCTTTCCTTCGGCGG 62.716 66.667 7.21 0.00 46.12 6.13
317 318 4.029809 CCCTTTCCTTCGGCGGGT 62.030 66.667 7.21 0.00 0.00 5.28
318 319 2.436115 CCTTTCCTTCGGCGGGTC 60.436 66.667 7.21 0.00 0.00 4.46
319 320 2.663196 CTTTCCTTCGGCGGGTCT 59.337 61.111 7.21 0.00 0.00 3.85
320 321 1.003718 CTTTCCTTCGGCGGGTCTT 60.004 57.895 7.21 0.00 0.00 3.01
321 322 1.004200 TTTCCTTCGGCGGGTCTTC 60.004 57.895 7.21 0.00 0.00 2.87
322 323 1.477685 TTTCCTTCGGCGGGTCTTCT 61.478 55.000 7.21 0.00 0.00 2.85
323 324 2.125512 CCTTCGGCGGGTCTTCTG 60.126 66.667 7.21 0.00 0.00 3.02
324 325 2.125512 CTTCGGCGGGTCTTCTGG 60.126 66.667 7.21 0.00 0.00 3.86
325 326 2.602267 TTCGGCGGGTCTTCTGGA 60.602 61.111 7.21 0.00 0.00 3.86
326 327 2.564553 CTTCGGCGGGTCTTCTGGAG 62.565 65.000 7.21 0.00 0.00 3.86
327 328 4.148825 CGGCGGGTCTTCTGGAGG 62.149 72.222 0.00 0.00 0.00 4.30
328 329 3.003763 GGCGGGTCTTCTGGAGGT 61.004 66.667 0.00 0.00 0.00 3.85
329 330 2.593956 GGCGGGTCTTCTGGAGGTT 61.594 63.158 0.00 0.00 0.00 3.50
330 331 1.079057 GCGGGTCTTCTGGAGGTTC 60.079 63.158 0.00 0.00 0.00 3.62
331 332 1.215647 CGGGTCTTCTGGAGGTTCG 59.784 63.158 0.00 0.00 0.00 3.95
332 333 1.597461 GGGTCTTCTGGAGGTTCGG 59.403 63.158 0.00 0.00 0.00 4.30
333 334 1.079057 GGTCTTCTGGAGGTTCGGC 60.079 63.158 0.00 0.00 0.00 5.54
334 335 1.545706 GGTCTTCTGGAGGTTCGGCT 61.546 60.000 0.00 0.00 0.00 5.52
335 336 0.390472 GTCTTCTGGAGGTTCGGCTG 60.390 60.000 0.00 0.00 0.00 4.85
336 337 1.078848 CTTCTGGAGGTTCGGCTGG 60.079 63.158 0.00 0.00 0.00 4.85
337 338 2.527951 CTTCTGGAGGTTCGGCTGGG 62.528 65.000 0.00 0.00 0.00 4.45
338 339 3.003173 CTGGAGGTTCGGCTGGGA 61.003 66.667 0.00 0.00 0.00 4.37
339 340 2.285368 TGGAGGTTCGGCTGGGAT 60.285 61.111 0.00 0.00 0.00 3.85
340 341 2.190578 GGAGGTTCGGCTGGGATG 59.809 66.667 0.00 0.00 0.00 3.51
341 342 2.670148 GGAGGTTCGGCTGGGATGT 61.670 63.158 0.00 0.00 0.00 3.06
342 343 1.450312 GAGGTTCGGCTGGGATGTG 60.450 63.158 0.00 0.00 0.00 3.21
343 344 2.185310 GAGGTTCGGCTGGGATGTGT 62.185 60.000 0.00 0.00 0.00 3.72
344 345 2.040544 GGTTCGGCTGGGATGTGTG 61.041 63.158 0.00 0.00 0.00 3.82
345 346 2.359850 TTCGGCTGGGATGTGTGC 60.360 61.111 0.00 0.00 0.00 4.57
346 347 4.758251 TCGGCTGGGATGTGTGCG 62.758 66.667 0.00 0.00 0.00 5.34
348 349 3.434319 GGCTGGGATGTGTGCGTG 61.434 66.667 0.00 0.00 0.00 5.34
349 350 4.107051 GCTGGGATGTGTGCGTGC 62.107 66.667 0.00 0.00 0.00 5.34
350 351 3.792047 CTGGGATGTGTGCGTGCG 61.792 66.667 0.00 0.00 0.00 5.34
351 352 4.617520 TGGGATGTGTGCGTGCGT 62.618 61.111 0.00 0.00 0.00 5.24
352 353 4.088762 GGGATGTGTGCGTGCGTG 62.089 66.667 0.00 0.00 0.00 5.34
353 354 4.741781 GGATGTGTGCGTGCGTGC 62.742 66.667 0.00 0.00 0.00 5.34
362 363 4.217111 CGTGCGTGCGTGTGTGTT 62.217 61.111 0.00 0.00 0.00 3.32
363 364 2.099446 GTGCGTGCGTGTGTGTTT 59.901 55.556 0.00 0.00 0.00 2.83
364 365 1.513160 GTGCGTGCGTGTGTGTTTT 60.513 52.632 0.00 0.00 0.00 2.43
365 366 1.068287 GTGCGTGCGTGTGTGTTTTT 61.068 50.000 0.00 0.00 0.00 1.94
383 384 3.553828 TTTTTCGGTTGTGTCTCCTCT 57.446 42.857 0.00 0.00 0.00 3.69
384 385 3.553828 TTTTCGGTTGTGTCTCCTCTT 57.446 42.857 0.00 0.00 0.00 2.85
385 386 2.526304 TTCGGTTGTGTCTCCTCTTG 57.474 50.000 0.00 0.00 0.00 3.02
386 387 1.410004 TCGGTTGTGTCTCCTCTTGT 58.590 50.000 0.00 0.00 0.00 3.16
387 388 1.760613 TCGGTTGTGTCTCCTCTTGTT 59.239 47.619 0.00 0.00 0.00 2.83
388 389 2.169769 TCGGTTGTGTCTCCTCTTGTTT 59.830 45.455 0.00 0.00 0.00 2.83
389 390 2.544267 CGGTTGTGTCTCCTCTTGTTTC 59.456 50.000 0.00 0.00 0.00 2.78
390 391 2.879026 GGTTGTGTCTCCTCTTGTTTCC 59.121 50.000 0.00 0.00 0.00 3.13
391 392 2.879026 GTTGTGTCTCCTCTTGTTTCCC 59.121 50.000 0.00 0.00 0.00 3.97
392 393 1.420138 TGTGTCTCCTCTTGTTTCCCC 59.580 52.381 0.00 0.00 0.00 4.81
393 394 1.064825 TGTCTCCTCTTGTTTCCCCC 58.935 55.000 0.00 0.00 0.00 5.40
394 395 0.036294 GTCTCCTCTTGTTTCCCCCG 60.036 60.000 0.00 0.00 0.00 5.73
395 396 0.473117 TCTCCTCTTGTTTCCCCCGT 60.473 55.000 0.00 0.00 0.00 5.28
396 397 0.321653 CTCCTCTTGTTTCCCCCGTG 60.322 60.000 0.00 0.00 0.00 4.94
397 398 1.057851 TCCTCTTGTTTCCCCCGTGT 61.058 55.000 0.00 0.00 0.00 4.49
398 399 0.688487 CCTCTTGTTTCCCCCGTGTA 59.312 55.000 0.00 0.00 0.00 2.90
399 400 1.280998 CCTCTTGTTTCCCCCGTGTAT 59.719 52.381 0.00 0.00 0.00 2.29
400 401 2.290705 CCTCTTGTTTCCCCCGTGTATT 60.291 50.000 0.00 0.00 0.00 1.89
401 402 3.007635 CTCTTGTTTCCCCCGTGTATTC 58.992 50.000 0.00 0.00 0.00 1.75
402 403 2.640826 TCTTGTTTCCCCCGTGTATTCT 59.359 45.455 0.00 0.00 0.00 2.40
403 404 2.483014 TGTTTCCCCCGTGTATTCTG 57.517 50.000 0.00 0.00 0.00 3.02
404 405 1.003812 TGTTTCCCCCGTGTATTCTGG 59.996 52.381 0.00 0.00 0.00 3.86
405 406 1.003928 GTTTCCCCCGTGTATTCTGGT 59.996 52.381 0.00 0.00 0.00 4.00
406 407 1.364269 TTCCCCCGTGTATTCTGGTT 58.636 50.000 0.00 0.00 0.00 3.67
407 408 0.906775 TCCCCCGTGTATTCTGGTTC 59.093 55.000 0.00 0.00 0.00 3.62
408 409 0.616371 CCCCCGTGTATTCTGGTTCA 59.384 55.000 0.00 0.00 0.00 3.18
409 410 1.677820 CCCCCGTGTATTCTGGTTCAC 60.678 57.143 0.00 0.00 0.00 3.18
410 411 1.278127 CCCCGTGTATTCTGGTTCACT 59.722 52.381 0.00 0.00 0.00 3.41
411 412 2.290071 CCCCGTGTATTCTGGTTCACTT 60.290 50.000 0.00 0.00 0.00 3.16
412 413 2.742053 CCCGTGTATTCTGGTTCACTTG 59.258 50.000 0.00 0.00 0.00 3.16
413 414 3.556213 CCCGTGTATTCTGGTTCACTTGA 60.556 47.826 0.00 0.00 0.00 3.02
414 415 4.062293 CCGTGTATTCTGGTTCACTTGAA 58.938 43.478 0.00 0.00 0.00 2.69
430 431 8.722480 TTCACTTGAACATATCTTGTATGGAG 57.278 34.615 0.76 0.00 37.68 3.86
431 432 6.763135 TCACTTGAACATATCTTGTATGGAGC 59.237 38.462 0.76 0.00 37.68 4.70
432 433 6.765036 CACTTGAACATATCTTGTATGGAGCT 59.235 38.462 0.00 0.00 37.68 4.09
433 434 6.765036 ACTTGAACATATCTTGTATGGAGCTG 59.235 38.462 0.00 0.00 37.68 4.24
434 435 5.059161 TGAACATATCTTGTATGGAGCTGC 58.941 41.667 0.00 0.00 37.68 5.25
435 436 3.657634 ACATATCTTGTATGGAGCTGCG 58.342 45.455 0.00 0.00 36.57 5.18
436 437 3.321968 ACATATCTTGTATGGAGCTGCGA 59.678 43.478 0.00 0.00 36.57 5.10
437 438 2.522836 ATCTTGTATGGAGCTGCGAG 57.477 50.000 0.00 0.00 0.00 5.03
438 439 0.461548 TCTTGTATGGAGCTGCGAGG 59.538 55.000 0.00 0.00 0.00 4.63
439 440 1.153369 TTGTATGGAGCTGCGAGGC 60.153 57.895 0.00 0.00 0.00 4.70
440 441 1.617018 TTGTATGGAGCTGCGAGGCT 61.617 55.000 0.00 2.28 46.11 4.58
441 442 1.144936 GTATGGAGCTGCGAGGCTT 59.855 57.895 0.00 0.00 43.20 4.35
442 443 0.878086 GTATGGAGCTGCGAGGCTTC 60.878 60.000 0.00 3.06 43.20 3.86
443 444 1.045350 TATGGAGCTGCGAGGCTTCT 61.045 55.000 0.00 0.00 43.20 2.85
444 445 1.045350 ATGGAGCTGCGAGGCTTCTA 61.045 55.000 0.00 0.94 43.20 2.10
445 446 1.067250 GGAGCTGCGAGGCTTCTAG 59.933 63.158 0.00 0.00 43.20 2.43
446 447 1.067250 GAGCTGCGAGGCTTCTAGG 59.933 63.158 0.00 0.00 43.20 3.02
447 448 2.587473 GCTGCGAGGCTTCTAGGC 60.587 66.667 0.00 0.00 41.73 3.93
448 449 2.895680 CTGCGAGGCTTCTAGGCA 59.104 61.111 3.01 0.00 44.19 4.75
449 450 1.219124 CTGCGAGGCTTCTAGGCAA 59.781 57.895 3.01 0.00 44.19 4.52
450 451 0.391661 CTGCGAGGCTTCTAGGCAAA 60.392 55.000 3.01 0.00 44.19 3.68
451 452 0.253044 TGCGAGGCTTCTAGGCAAAT 59.747 50.000 3.01 0.00 44.19 2.32
452 453 1.340017 TGCGAGGCTTCTAGGCAAATT 60.340 47.619 3.01 0.00 44.19 1.82
453 454 1.332065 GCGAGGCTTCTAGGCAAATTC 59.668 52.381 3.01 0.00 44.19 2.17
454 455 1.594862 CGAGGCTTCTAGGCAAATTCG 59.405 52.381 3.01 0.00 44.19 3.34
455 456 2.738643 CGAGGCTTCTAGGCAAATTCGA 60.739 50.000 3.01 0.00 44.19 3.71
456 457 3.471680 GAGGCTTCTAGGCAAATTCGAT 58.528 45.455 3.01 0.00 44.19 3.59
457 458 3.209410 AGGCTTCTAGGCAAATTCGATG 58.791 45.455 3.01 0.00 44.19 3.84
458 459 3.118261 AGGCTTCTAGGCAAATTCGATGA 60.118 43.478 3.01 0.00 44.19 2.92
459 460 3.627577 GGCTTCTAGGCAAATTCGATGAA 59.372 43.478 0.00 0.00 40.97 2.57
460 461 4.096382 GGCTTCTAGGCAAATTCGATGAAA 59.904 41.667 0.00 0.00 40.97 2.69
461 462 5.221126 GGCTTCTAGGCAAATTCGATGAAAT 60.221 40.000 0.00 0.00 40.97 2.17
462 463 6.017109 GGCTTCTAGGCAAATTCGATGAAATA 60.017 38.462 0.00 0.00 40.97 1.40
463 464 7.308830 GGCTTCTAGGCAAATTCGATGAAATAT 60.309 37.037 0.00 0.00 40.97 1.28
464 465 8.721478 GCTTCTAGGCAAATTCGATGAAATATA 58.279 33.333 0.00 0.00 0.00 0.86
470 471 8.517878 AGGCAAATTCGATGAAATATATTCAGG 58.482 33.333 0.00 0.00 0.00 3.86
471 472 8.299570 GGCAAATTCGATGAAATATATTCAGGT 58.700 33.333 0.00 0.00 0.00 4.00
472 473 9.121517 GCAAATTCGATGAAATATATTCAGGTG 57.878 33.333 0.00 0.00 0.00 4.00
473 474 9.616634 CAAATTCGATGAAATATATTCAGGTGG 57.383 33.333 0.00 0.00 0.00 4.61
474 475 8.924511 AATTCGATGAAATATATTCAGGTGGT 57.075 30.769 0.00 0.00 0.00 4.16
475 476 8.924511 ATTCGATGAAATATATTCAGGTGGTT 57.075 30.769 0.00 0.00 0.00 3.67
476 477 7.728847 TCGATGAAATATATTCAGGTGGTTG 57.271 36.000 0.00 0.00 0.00 3.77
477 478 7.505258 TCGATGAAATATATTCAGGTGGTTGA 58.495 34.615 0.00 0.00 0.00 3.18
478 479 7.657354 TCGATGAAATATATTCAGGTGGTTGAG 59.343 37.037 0.00 0.00 0.00 3.02
479 480 6.942532 TGAAATATATTCAGGTGGTTGAGC 57.057 37.500 0.00 0.00 0.00 4.26
480 481 5.827797 TGAAATATATTCAGGTGGTTGAGCC 59.172 40.000 0.00 0.00 37.90 4.70
481 482 2.736670 ATATTCAGGTGGTTGAGCCC 57.263 50.000 0.00 0.00 36.04 5.19
482 483 0.623723 TATTCAGGTGGTTGAGCCCC 59.376 55.000 0.00 0.00 36.04 5.80
483 484 2.155197 ATTCAGGTGGTTGAGCCCCC 62.155 60.000 0.00 0.00 36.04 5.40
824 825 1.303888 AGCTCACCAACATGCCCAG 60.304 57.895 0.00 0.00 0.00 4.45
869 4841 7.512297 ACAAAAACCGTTTATATAGTCACACG 58.488 34.615 0.00 0.00 0.00 4.49
910 4887 2.435586 ACACAGCCTGATCAGCGC 60.436 61.111 17.76 20.12 34.64 5.92
957 4948 0.033366 CCCCAACCCAAGAAAAAGCG 59.967 55.000 0.00 0.00 0.00 4.68
1299 5294 4.367023 AACAAGACCCGCGCGCTA 62.367 61.111 30.48 0.00 0.00 4.26
1704 6302 4.261197 GGCCGGTGATTCAGAAATATGTTC 60.261 45.833 1.90 0.00 0.00 3.18
1811 6421 0.031994 GGTTGTTTTGCTGCGGACAT 59.968 50.000 0.00 0.00 0.00 3.06
1842 6452 8.841300 AGAAGAGTCAATTTCACTTTTTACCTC 58.159 33.333 0.00 0.00 0.00 3.85
1856 6476 8.817100 CACTTTTTACCTCCTTTTTGTCATTTC 58.183 33.333 0.00 0.00 0.00 2.17
1921 6557 6.214615 CCCCTTTTAACCAAACTTTATCCCAT 59.785 38.462 0.00 0.00 0.00 4.00
1931 6567 8.838741 ACCAAACTTTATCCCATACTTTACCTA 58.161 33.333 0.00 0.00 0.00 3.08
1951 6727 9.679661 TTACCTATTTTTCTGATAAGCATGTGA 57.320 29.630 0.00 0.00 0.00 3.58
1958 6734 7.451501 TTTCTGATAAGCATGTGATGTCAAA 57.548 32.000 0.00 0.00 0.00 2.69
1968 6744 2.028839 TGTGATGTCAAACCGGTCGTAT 60.029 45.455 8.04 0.00 0.00 3.06
1977 6753 1.117150 ACCGGTCGTATAAGGCACAT 58.883 50.000 0.00 0.00 0.00 3.21
1982 6758 2.419574 GGTCGTATAAGGCACATGTGGT 60.420 50.000 26.55 0.00 0.00 4.16
2047 6838 1.683790 CTCGCGCGATTTTCGTCCTT 61.684 55.000 34.86 0.00 42.81 3.36
2054 6845 1.654105 CGATTTTCGTCCTTCGGTCAG 59.346 52.381 0.00 0.00 40.32 3.51
2076 6867 3.879682 CACGCATGCCCGGTCATG 61.880 66.667 20.99 20.99 44.93 3.07
2088 6879 2.580470 GGTCATGCATCGCGTCTCG 61.580 63.158 5.77 0.00 40.15 4.04
2091 6882 2.167219 CATGCATCGCGTCTCGGTT 61.167 57.895 5.77 0.00 39.05 4.44
2100 7537 1.860078 CGTCTCGGTTTGGCAAGTC 59.140 57.895 0.00 0.00 0.00 3.01
2142 7612 2.359900 CTTCTTTAGCTTCATGGCGGT 58.640 47.619 0.00 0.00 37.29 5.68
2176 7646 3.564225 ACATTTGGTTCCGTCTTCTTGAC 59.436 43.478 0.00 0.00 42.06 3.18
2200 8016 4.347453 GCCAAGCTGTTGCACCGG 62.347 66.667 0.00 0.00 42.74 5.28
2216 8032 4.695560 GGCACGTACTTGAAGGCT 57.304 55.556 3.09 0.00 0.00 4.58
2228 8045 3.117663 ACTTGAAGGCTTGTTCCTTGGTA 60.118 43.478 3.46 0.00 45.92 3.25
2240 8057 1.247419 CCTTGGTAATGTTGCCGCCA 61.247 55.000 0.00 0.00 35.50 5.69
2245 8062 0.248054 GTAATGTTGCCGCCATCACG 60.248 55.000 0.00 0.00 0.00 4.35
2248 8065 3.047280 GTTGCCGCCATCACGACA 61.047 61.111 0.00 0.00 34.06 4.35
2250 8067 4.758251 TGCCGCCATCACGACAGG 62.758 66.667 0.00 0.00 34.06 4.00
2267 8084 0.325296 AGGCGATAACCTCTGGGACA 60.325 55.000 0.00 0.00 33.62 4.02
2281 8098 0.954452 GGGACAGGAGCAACTTGTTG 59.046 55.000 8.95 8.95 38.90 3.33
2299 8116 2.205022 TGAGTGGCCATTTCTTCCTG 57.795 50.000 9.72 0.00 0.00 3.86
2323 8140 4.394920 CCACTATTGTTAACGATGGCAACT 59.605 41.667 17.22 0.00 37.61 3.16
2327 8144 1.795872 TGTTAACGATGGCAACTCACG 59.204 47.619 0.26 0.00 37.61 4.35
2333 8150 1.656652 GATGGCAACTCACGCACTAT 58.343 50.000 0.00 0.00 37.61 2.12
2346 8246 8.804688 ACTCACGCACTATTTATATTTCTCTC 57.195 34.615 0.00 0.00 0.00 3.20
2383 8283 3.134623 CCACCTCAACATAGATGCTACCA 59.865 47.826 0.00 0.00 0.00 3.25
2429 8341 0.895100 TTCACTTGCATGCTCCACCC 60.895 55.000 20.33 0.00 0.00 4.61
2434 8346 1.496444 TTGCATGCTCCACCCCACTA 61.496 55.000 20.33 0.00 0.00 2.74
2508 8420 4.220163 TGTTTGCCACATCATTAGCATGAA 59.780 37.500 0.00 0.00 42.93 2.57
2512 8424 4.891168 TGCCACATCATTAGCATGAAATCT 59.109 37.500 0.00 0.00 42.93 2.40
2551 8463 8.716646 TCTCACAATGTATACCACAATACAAG 57.283 34.615 0.00 1.04 43.59 3.16
2583 9084 1.098050 GTCATGATCTGCCACAACCC 58.902 55.000 0.00 0.00 0.00 4.11
2590 9091 1.656587 TCTGCCACAACCCAGAGTAT 58.343 50.000 0.00 0.00 33.44 2.12
2592 9093 3.384168 TCTGCCACAACCCAGAGTATAT 58.616 45.455 0.00 0.00 33.44 0.86
2601 9102 5.646360 ACAACCCAGAGTATATTTTTGTCCG 59.354 40.000 0.00 0.00 0.00 4.79
2603 9104 5.671493 ACCCAGAGTATATTTTTGTCCGAG 58.329 41.667 0.00 0.00 0.00 4.63
2647 9148 1.066257 CAAAGCGTTGCAGCACCTT 59.934 52.632 0.00 0.00 40.15 3.50
2649 9150 0.175531 AAAGCGTTGCAGCACCTTTT 59.824 45.000 0.00 0.00 40.15 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.997928 CTGAGCCACGATCTCGCAGA 61.998 60.000 0.00 0.00 44.43 4.26
2 3 1.588403 CTGAGCCACGATCTCGCAG 60.588 63.158 0.00 0.00 44.43 5.18
3 4 2.491621 CTGAGCCACGATCTCGCA 59.508 61.111 0.00 0.00 44.43 5.10
22 23 3.585990 GACCCATTCCGGCGCATG 61.586 66.667 10.83 3.77 0.00 4.06
23 24 3.797353 AGACCCATTCCGGCGCAT 61.797 61.111 10.83 0.00 0.00 4.73
24 25 4.776322 CAGACCCATTCCGGCGCA 62.776 66.667 10.83 0.00 0.00 6.09
25 26 3.757248 ATCAGACCCATTCCGGCGC 62.757 63.158 0.00 0.00 0.00 6.53
26 27 0.748005 AAATCAGACCCATTCCGGCG 60.748 55.000 0.00 0.00 0.00 6.46
27 28 1.405463 GAAAATCAGACCCATTCCGGC 59.595 52.381 0.00 0.00 0.00 6.13
28 29 2.722094 TGAAAATCAGACCCATTCCGG 58.278 47.619 0.00 0.00 0.00 5.14
29 30 3.316308 GGATGAAAATCAGACCCATTCCG 59.684 47.826 0.00 0.00 0.00 4.30
30 31 3.316308 CGGATGAAAATCAGACCCATTCC 59.684 47.826 0.00 0.00 0.00 3.01
31 32 4.199310 TCGGATGAAAATCAGACCCATTC 58.801 43.478 0.00 0.00 0.00 2.67
32 33 4.235079 TCGGATGAAAATCAGACCCATT 57.765 40.909 0.00 0.00 0.00 3.16
33 34 3.931907 TCGGATGAAAATCAGACCCAT 57.068 42.857 0.00 0.00 0.00 4.00
34 35 3.609853 CTTCGGATGAAAATCAGACCCA 58.390 45.455 0.00 0.00 32.66 4.51
35 36 2.356069 GCTTCGGATGAAAATCAGACCC 59.644 50.000 0.00 0.00 32.66 4.46
36 37 2.356069 GGCTTCGGATGAAAATCAGACC 59.644 50.000 0.00 0.00 32.66 3.85
37 38 2.030946 CGGCTTCGGATGAAAATCAGAC 59.969 50.000 0.00 0.00 32.66 3.51
38 39 2.279741 CGGCTTCGGATGAAAATCAGA 58.720 47.619 0.00 0.00 32.66 3.27
39 40 2.744787 CGGCTTCGGATGAAAATCAG 57.255 50.000 0.00 0.00 32.66 2.90
52 53 4.851179 CCCCGCTAACCCGGCTTC 62.851 72.222 0.00 0.00 46.77 3.86
57 58 2.019897 ATAACGACCCCGCTAACCCG 62.020 60.000 0.00 0.00 39.95 5.28
58 59 0.249615 GATAACGACCCCGCTAACCC 60.250 60.000 0.00 0.00 39.95 4.11
59 60 0.249615 GGATAACGACCCCGCTAACC 60.250 60.000 0.00 0.00 39.95 2.85
60 61 0.749049 AGGATAACGACCCCGCTAAC 59.251 55.000 0.00 0.00 39.95 2.34
61 62 1.956477 GTAGGATAACGACCCCGCTAA 59.044 52.381 0.00 0.00 39.95 3.09
62 63 1.143684 AGTAGGATAACGACCCCGCTA 59.856 52.381 0.00 0.00 39.95 4.26
63 64 0.106318 AGTAGGATAACGACCCCGCT 60.106 55.000 0.00 0.00 39.95 5.52
64 65 0.313357 GAGTAGGATAACGACCCCGC 59.687 60.000 0.00 0.00 39.95 6.13
65 66 1.683943 TGAGTAGGATAACGACCCCG 58.316 55.000 0.00 0.00 42.50 5.73
66 67 3.244112 CCATTGAGTAGGATAACGACCCC 60.244 52.174 0.00 0.00 0.00 4.95
67 68 3.640029 TCCATTGAGTAGGATAACGACCC 59.360 47.826 0.00 0.00 0.00 4.46
68 69 4.931661 TCCATTGAGTAGGATAACGACC 57.068 45.455 0.00 0.00 0.00 4.79
69 70 5.921408 GTGATCCATTGAGTAGGATAACGAC 59.079 44.000 0.00 0.00 44.44 4.34
70 71 5.010719 GGTGATCCATTGAGTAGGATAACGA 59.989 44.000 0.00 0.00 43.87 3.85
71 72 5.011125 AGGTGATCCATTGAGTAGGATAACG 59.989 44.000 0.00 0.00 43.87 3.18
72 73 6.426646 AGGTGATCCATTGAGTAGGATAAC 57.573 41.667 0.00 0.00 44.44 1.89
73 74 5.243954 CGAGGTGATCCATTGAGTAGGATAA 59.756 44.000 0.00 0.00 44.44 1.75
74 75 4.767409 CGAGGTGATCCATTGAGTAGGATA 59.233 45.833 0.00 0.00 44.44 2.59
75 76 3.576118 CGAGGTGATCCATTGAGTAGGAT 59.424 47.826 0.00 0.00 46.98 3.24
76 77 2.959030 CGAGGTGATCCATTGAGTAGGA 59.041 50.000 0.00 0.00 38.50 2.94
77 78 2.695666 ACGAGGTGATCCATTGAGTAGG 59.304 50.000 0.00 0.00 35.89 3.18
78 79 4.363999 GAACGAGGTGATCCATTGAGTAG 58.636 47.826 0.00 0.00 35.89 2.57
79 80 3.132289 GGAACGAGGTGATCCATTGAGTA 59.868 47.826 0.00 0.00 39.29 2.59
80 81 2.093447 GGAACGAGGTGATCCATTGAGT 60.093 50.000 0.00 0.00 39.29 3.41
81 82 2.555199 GGAACGAGGTGATCCATTGAG 58.445 52.381 0.00 0.00 39.29 3.02
82 83 1.209504 GGGAACGAGGTGATCCATTGA 59.790 52.381 0.00 0.00 41.20 2.57
83 84 1.065491 TGGGAACGAGGTGATCCATTG 60.065 52.381 0.00 0.00 41.20 2.82
84 85 1.285280 TGGGAACGAGGTGATCCATT 58.715 50.000 0.00 0.00 41.20 3.16
85 86 1.511613 ATGGGAACGAGGTGATCCAT 58.488 50.000 0.00 0.00 41.20 3.41
86 87 2.168458 TATGGGAACGAGGTGATCCA 57.832 50.000 0.00 0.00 41.20 3.41
87 88 2.289694 CCATATGGGAACGAGGTGATCC 60.290 54.545 14.52 0.00 40.01 3.36
88 89 2.872038 GCCATATGGGAACGAGGTGATC 60.872 54.545 23.30 0.00 40.01 2.92
89 90 1.072331 GCCATATGGGAACGAGGTGAT 59.928 52.381 23.30 0.00 40.01 3.06
90 91 0.468226 GCCATATGGGAACGAGGTGA 59.532 55.000 23.30 0.00 40.01 4.02
91 92 0.180171 TGCCATATGGGAACGAGGTG 59.820 55.000 23.30 0.00 40.01 4.00
92 93 0.180406 GTGCCATATGGGAACGAGGT 59.820 55.000 23.30 0.00 34.74 3.85
93 94 3.006672 GTGCCATATGGGAACGAGG 57.993 57.895 23.30 0.00 34.74 4.63
97 98 2.224548 GGTAGAGGTGCCATATGGGAAC 60.225 54.545 22.98 22.98 45.70 3.62
98 99 2.054799 GGTAGAGGTGCCATATGGGAA 58.945 52.381 23.30 1.91 40.01 3.97
99 100 1.223077 AGGTAGAGGTGCCATATGGGA 59.777 52.381 23.30 18.42 40.01 4.37
100 101 1.625818 GAGGTAGAGGTGCCATATGGG 59.374 57.143 23.30 5.41 40.85 4.00
101 102 2.301296 CAGAGGTAGAGGTGCCATATGG 59.699 54.545 18.07 18.07 38.53 2.74
102 103 2.289320 GCAGAGGTAGAGGTGCCATATG 60.289 54.545 0.00 0.00 0.00 1.78
103 104 1.974236 GCAGAGGTAGAGGTGCCATAT 59.026 52.381 0.00 0.00 0.00 1.78
104 105 1.414158 GCAGAGGTAGAGGTGCCATA 58.586 55.000 0.00 0.00 0.00 2.74
105 106 1.680522 CGCAGAGGTAGAGGTGCCAT 61.681 60.000 0.00 0.00 31.98 4.40
106 107 2.351244 CGCAGAGGTAGAGGTGCCA 61.351 63.158 0.00 0.00 31.98 4.92
107 108 2.496817 CGCAGAGGTAGAGGTGCC 59.503 66.667 0.00 0.00 31.98 5.01
108 109 2.496817 CCGCAGAGGTAGAGGTGC 59.503 66.667 0.00 0.00 34.51 5.01
109 110 2.427245 CCCCGCAGAGGTAGAGGTG 61.427 68.421 0.00 0.00 38.74 4.00
110 111 2.042843 CCCCGCAGAGGTAGAGGT 60.043 66.667 0.00 0.00 38.74 3.85
111 112 2.840102 CCCCCGCAGAGGTAGAGG 60.840 72.222 0.00 0.00 38.74 3.69
126 127 4.966787 TCGCCAACCAACAGCCCC 62.967 66.667 0.00 0.00 0.00 5.80
127 128 3.670377 GTCGCCAACCAACAGCCC 61.670 66.667 0.00 0.00 0.00 5.19
151 152 0.238553 GAAGAGCCTTGAACGTTGGC 59.761 55.000 17.90 17.90 46.42 4.52
152 153 1.801178 GAGAAGAGCCTTGAACGTTGG 59.199 52.381 5.00 1.30 0.00 3.77
153 154 1.801178 GGAGAAGAGCCTTGAACGTTG 59.199 52.381 5.00 0.00 0.00 4.10
154 155 1.694696 AGGAGAAGAGCCTTGAACGTT 59.305 47.619 0.00 0.00 29.44 3.99
155 156 1.343069 AGGAGAAGAGCCTTGAACGT 58.657 50.000 0.00 0.00 29.44 3.99
156 157 2.464157 AAGGAGAAGAGCCTTGAACG 57.536 50.000 0.00 0.00 43.84 3.95
161 162 1.271817 CCAAGCAAGGAGAAGAGCCTT 60.272 52.381 0.00 0.00 46.36 4.35
162 163 0.327591 CCAAGCAAGGAGAAGAGCCT 59.672 55.000 0.00 0.00 37.35 4.58
163 164 0.037447 ACCAAGCAAGGAGAAGAGCC 59.963 55.000 1.01 0.00 0.00 4.70
164 165 1.447945 GACCAAGCAAGGAGAAGAGC 58.552 55.000 1.01 0.00 0.00 4.09
165 166 1.674221 CCGACCAAGCAAGGAGAAGAG 60.674 57.143 1.01 0.00 0.00 2.85
166 167 0.321671 CCGACCAAGCAAGGAGAAGA 59.678 55.000 1.01 0.00 0.00 2.87
167 168 0.321671 TCCGACCAAGCAAGGAGAAG 59.678 55.000 1.01 0.00 0.00 2.85
168 169 0.984230 ATCCGACCAAGCAAGGAGAA 59.016 50.000 1.01 0.00 36.08 2.87
169 170 0.250234 CATCCGACCAAGCAAGGAGA 59.750 55.000 1.01 0.00 36.08 3.71
170 171 0.250234 TCATCCGACCAAGCAAGGAG 59.750 55.000 1.01 0.00 36.08 3.69
171 172 0.690192 TTCATCCGACCAAGCAAGGA 59.310 50.000 1.01 0.00 37.17 3.36
172 173 1.089920 CTTCATCCGACCAAGCAAGG 58.910 55.000 0.00 0.00 0.00 3.61
173 174 1.089920 CCTTCATCCGACCAAGCAAG 58.910 55.000 0.00 0.00 0.00 4.01
174 175 0.400213 ACCTTCATCCGACCAAGCAA 59.600 50.000 0.00 0.00 0.00 3.91
175 176 0.321564 CACCTTCATCCGACCAAGCA 60.322 55.000 0.00 0.00 0.00 3.91
176 177 0.321653 ACACCTTCATCCGACCAAGC 60.322 55.000 0.00 0.00 0.00 4.01
177 178 3.262420 CTTACACCTTCATCCGACCAAG 58.738 50.000 0.00 0.00 0.00 3.61
178 179 2.635915 ACTTACACCTTCATCCGACCAA 59.364 45.455 0.00 0.00 0.00 3.67
179 180 2.253610 ACTTACACCTTCATCCGACCA 58.746 47.619 0.00 0.00 0.00 4.02
180 181 3.000727 CAACTTACACCTTCATCCGACC 58.999 50.000 0.00 0.00 0.00 4.79
181 182 3.921677 TCAACTTACACCTTCATCCGAC 58.078 45.455 0.00 0.00 0.00 4.79
182 183 3.056107 CCTCAACTTACACCTTCATCCGA 60.056 47.826 0.00 0.00 0.00 4.55
183 184 3.262420 CCTCAACTTACACCTTCATCCG 58.738 50.000 0.00 0.00 0.00 4.18
184 185 4.254492 GACCTCAACTTACACCTTCATCC 58.746 47.826 0.00 0.00 0.00 3.51
185 186 4.020128 AGGACCTCAACTTACACCTTCATC 60.020 45.833 0.00 0.00 0.00 2.92
186 187 3.910627 AGGACCTCAACTTACACCTTCAT 59.089 43.478 0.00 0.00 0.00 2.57
187 188 3.314693 AGGACCTCAACTTACACCTTCA 58.685 45.455 0.00 0.00 0.00 3.02
188 189 3.306849 GGAGGACCTCAACTTACACCTTC 60.307 52.174 23.06 0.00 31.08 3.46
189 190 2.638363 GGAGGACCTCAACTTACACCTT 59.362 50.000 23.06 0.00 31.08 3.50
190 191 2.158143 AGGAGGACCTCAACTTACACCT 60.158 50.000 23.06 5.32 44.13 4.00
191 192 2.258109 AGGAGGACCTCAACTTACACC 58.742 52.381 23.06 2.88 44.13 4.16
203 204 1.492993 AACCAGCAAGGAGGAGGACC 61.493 60.000 1.83 0.00 41.22 4.46
204 205 0.322008 CAACCAGCAAGGAGGAGGAC 60.322 60.000 1.83 0.00 41.22 3.85
205 206 0.768221 ACAACCAGCAAGGAGGAGGA 60.768 55.000 1.83 0.00 41.22 3.71
206 207 0.607489 CACAACCAGCAAGGAGGAGG 60.607 60.000 1.83 0.00 41.22 4.30
207 208 1.239968 GCACAACCAGCAAGGAGGAG 61.240 60.000 1.83 0.00 41.22 3.69
208 209 1.228245 GCACAACCAGCAAGGAGGA 60.228 57.895 1.83 0.00 41.22 3.71
209 210 1.228367 AGCACAACCAGCAAGGAGG 60.228 57.895 1.83 0.00 41.22 4.30
210 211 0.535780 TCAGCACAACCAGCAAGGAG 60.536 55.000 1.83 0.00 41.22 3.69
211 212 0.111061 ATCAGCACAACCAGCAAGGA 59.889 50.000 1.83 0.00 41.22 3.36
212 213 0.242825 CATCAGCACAACCAGCAAGG 59.757 55.000 0.00 0.00 45.67 3.61
213 214 1.241165 TCATCAGCACAACCAGCAAG 58.759 50.000 0.00 0.00 0.00 4.01
214 215 1.913778 ATCATCAGCACAACCAGCAA 58.086 45.000 0.00 0.00 0.00 3.91
215 216 2.785540 TATCATCAGCACAACCAGCA 57.214 45.000 0.00 0.00 0.00 4.41
216 217 3.250280 CAGATATCATCAGCACAACCAGC 59.750 47.826 5.32 0.00 0.00 4.85
217 218 3.813724 CCAGATATCATCAGCACAACCAG 59.186 47.826 5.32 0.00 0.00 4.00
218 219 3.455543 TCCAGATATCATCAGCACAACCA 59.544 43.478 5.32 0.00 0.00 3.67
219 220 4.077300 TCCAGATATCATCAGCACAACC 57.923 45.455 5.32 0.00 0.00 3.77
220 221 5.048921 CCATTCCAGATATCATCAGCACAAC 60.049 44.000 5.32 0.00 0.00 3.32
221 222 5.067954 CCATTCCAGATATCATCAGCACAA 58.932 41.667 5.32 0.00 0.00 3.33
222 223 4.648651 CCATTCCAGATATCATCAGCACA 58.351 43.478 5.32 0.00 0.00 4.57
223 224 3.439476 GCCATTCCAGATATCATCAGCAC 59.561 47.826 5.32 0.00 0.00 4.40
224 225 3.682696 GCCATTCCAGATATCATCAGCA 58.317 45.455 5.32 0.00 0.00 4.41
225 226 2.676839 CGCCATTCCAGATATCATCAGC 59.323 50.000 5.32 0.00 0.00 4.26
226 227 3.268330 CCGCCATTCCAGATATCATCAG 58.732 50.000 5.32 0.00 0.00 2.90
227 228 2.639347 ACCGCCATTCCAGATATCATCA 59.361 45.455 5.32 0.00 0.00 3.07
228 229 3.340814 ACCGCCATTCCAGATATCATC 57.659 47.619 5.32 0.00 0.00 2.92
229 230 3.198635 CCTACCGCCATTCCAGATATCAT 59.801 47.826 5.32 0.00 0.00 2.45
230 231 2.567169 CCTACCGCCATTCCAGATATCA 59.433 50.000 5.32 0.00 0.00 2.15
231 232 2.567615 ACCTACCGCCATTCCAGATATC 59.432 50.000 0.00 0.00 0.00 1.63
232 233 2.303022 CACCTACCGCCATTCCAGATAT 59.697 50.000 0.00 0.00 0.00 1.63
233 234 1.691976 CACCTACCGCCATTCCAGATA 59.308 52.381 0.00 0.00 0.00 1.98
234 235 0.469917 CACCTACCGCCATTCCAGAT 59.530 55.000 0.00 0.00 0.00 2.90
235 236 1.622607 CCACCTACCGCCATTCCAGA 61.623 60.000 0.00 0.00 0.00 3.86
236 237 1.153168 CCACCTACCGCCATTCCAG 60.153 63.158 0.00 0.00 0.00 3.86
237 238 1.921346 ACCACCTACCGCCATTCCA 60.921 57.895 0.00 0.00 0.00 3.53
238 239 1.451387 CACCACCTACCGCCATTCC 60.451 63.158 0.00 0.00 0.00 3.01
239 240 0.322187 AACACCACCTACCGCCATTC 60.322 55.000 0.00 0.00 0.00 2.67
240 241 0.608035 CAACACCACCTACCGCCATT 60.608 55.000 0.00 0.00 0.00 3.16
241 242 1.002624 CAACACCACCTACCGCCAT 60.003 57.895 0.00 0.00 0.00 4.40
242 243 2.428187 CAACACCACCTACCGCCA 59.572 61.111 0.00 0.00 0.00 5.69
243 244 2.359478 CCAACACCACCTACCGCC 60.359 66.667 0.00 0.00 0.00 6.13
244 245 1.964373 CACCAACACCACCTACCGC 60.964 63.158 0.00 0.00 0.00 5.68
245 246 1.964373 GCACCAACACCACCTACCG 60.964 63.158 0.00 0.00 0.00 4.02
246 247 1.964373 CGCACCAACACCACCTACC 60.964 63.158 0.00 0.00 0.00 3.18
247 248 1.226030 GACGCACCAACACCACCTAC 61.226 60.000 0.00 0.00 0.00 3.18
248 249 1.070105 GACGCACCAACACCACCTA 59.930 57.895 0.00 0.00 0.00 3.08
249 250 2.203153 GACGCACCAACACCACCT 60.203 61.111 0.00 0.00 0.00 4.00
250 251 3.284449 GGACGCACCAACACCACC 61.284 66.667 0.00 0.00 38.79 4.61
251 252 2.515057 TGGACGCACCAACACCAC 60.515 61.111 0.00 0.00 46.75 4.16
259 260 3.665675 ATCCGAAGCTGGACGCACC 62.666 63.158 0.00 0.00 41.85 5.01
260 261 2.125512 ATCCGAAGCTGGACGCAC 60.126 61.111 0.00 0.00 41.85 5.34
261 262 1.960040 ATGATCCGAAGCTGGACGCA 61.960 55.000 0.00 0.00 41.85 5.24
262 263 1.218230 GATGATCCGAAGCTGGACGC 61.218 60.000 0.00 0.00 41.85 5.19
263 264 0.936764 CGATGATCCGAAGCTGGACG 60.937 60.000 0.00 0.00 41.85 4.79
264 265 0.385751 TCGATGATCCGAAGCTGGAC 59.614 55.000 0.00 0.00 41.85 4.02
265 266 1.111277 TTCGATGATCCGAAGCTGGA 58.889 50.000 3.10 0.00 42.74 3.86
266 267 3.667448 TTCGATGATCCGAAGCTGG 57.333 52.632 3.10 0.00 42.74 4.85
271 272 0.830648 AGGCCTTTCGATGATCCGAA 59.169 50.000 0.00 3.10 45.45 4.30
272 273 0.830648 AAGGCCTTTCGATGATCCGA 59.169 50.000 13.78 0.00 36.70 4.55
273 274 1.202580 AGAAGGCCTTTCGATGATCCG 60.203 52.381 21.54 0.00 40.86 4.18
274 275 2.629336 AGAAGGCCTTTCGATGATCC 57.371 50.000 21.54 2.89 40.86 3.36
275 276 3.559242 CAGAAGAAGGCCTTTCGATGATC 59.441 47.826 21.54 3.76 40.86 2.92
276 277 3.054802 ACAGAAGAAGGCCTTTCGATGAT 60.055 43.478 21.54 0.00 40.86 2.45
277 278 2.303022 ACAGAAGAAGGCCTTTCGATGA 59.697 45.455 21.54 0.00 40.86 2.92
278 279 2.417933 CACAGAAGAAGGCCTTTCGATG 59.582 50.000 21.54 18.05 40.86 3.84
279 280 2.704572 CACAGAAGAAGGCCTTTCGAT 58.295 47.619 21.54 6.20 40.86 3.59
280 281 1.878102 GCACAGAAGAAGGCCTTTCGA 60.878 52.381 21.54 0.00 40.86 3.71
281 282 0.519077 GCACAGAAGAAGGCCTTTCG 59.481 55.000 21.54 12.45 40.86 3.46
282 283 0.884514 GGCACAGAAGAAGGCCTTTC 59.115 55.000 21.54 14.49 43.09 2.62
283 284 0.540597 GGGCACAGAAGAAGGCCTTT 60.541 55.000 21.54 3.90 45.68 3.11
284 285 1.075659 GGGCACAGAAGAAGGCCTT 59.924 57.895 20.65 20.65 45.68 4.35
285 286 2.759795 GGGCACAGAAGAAGGCCT 59.240 61.111 0.00 0.00 45.68 5.19
287 288 0.884514 GAAAGGGCACAGAAGAAGGC 59.115 55.000 0.00 0.00 0.00 4.35
288 289 1.074566 AGGAAAGGGCACAGAAGAAGG 59.925 52.381 0.00 0.00 0.00 3.46
289 290 2.575805 AGGAAAGGGCACAGAAGAAG 57.424 50.000 0.00 0.00 0.00 2.85
290 291 2.810400 CGAAGGAAAGGGCACAGAAGAA 60.810 50.000 0.00 0.00 0.00 2.52
291 292 1.270839 CGAAGGAAAGGGCACAGAAGA 60.271 52.381 0.00 0.00 0.00 2.87
292 293 1.160137 CGAAGGAAAGGGCACAGAAG 58.840 55.000 0.00 0.00 0.00 2.85
293 294 3.322514 CGAAGGAAAGGGCACAGAA 57.677 52.632 0.00 0.00 0.00 3.02
307 308 2.125512 CCAGAAGACCCGCCGAAG 60.126 66.667 0.00 0.00 0.00 3.79
308 309 2.602267 TCCAGAAGACCCGCCGAA 60.602 61.111 0.00 0.00 0.00 4.30
309 310 3.068691 CTCCAGAAGACCCGCCGA 61.069 66.667 0.00 0.00 0.00 5.54
310 311 4.148825 CCTCCAGAAGACCCGCCG 62.149 72.222 0.00 0.00 0.00 6.46
311 312 2.523453 GAACCTCCAGAAGACCCGCC 62.523 65.000 0.00 0.00 0.00 6.13
312 313 1.079057 GAACCTCCAGAAGACCCGC 60.079 63.158 0.00 0.00 0.00 6.13
313 314 1.215647 CGAACCTCCAGAAGACCCG 59.784 63.158 0.00 0.00 0.00 5.28
314 315 1.597461 CCGAACCTCCAGAAGACCC 59.403 63.158 0.00 0.00 0.00 4.46
315 316 1.079057 GCCGAACCTCCAGAAGACC 60.079 63.158 0.00 0.00 0.00 3.85
316 317 0.390472 CAGCCGAACCTCCAGAAGAC 60.390 60.000 0.00 0.00 0.00 3.01
317 318 1.544825 CCAGCCGAACCTCCAGAAGA 61.545 60.000 0.00 0.00 0.00 2.87
318 319 1.078848 CCAGCCGAACCTCCAGAAG 60.079 63.158 0.00 0.00 0.00 2.85
319 320 2.592993 CCCAGCCGAACCTCCAGAA 61.593 63.158 0.00 0.00 0.00 3.02
320 321 2.822643 ATCCCAGCCGAACCTCCAGA 62.823 60.000 0.00 0.00 0.00 3.86
321 322 2.370445 ATCCCAGCCGAACCTCCAG 61.370 63.158 0.00 0.00 0.00 3.86
322 323 2.285368 ATCCCAGCCGAACCTCCA 60.285 61.111 0.00 0.00 0.00 3.86
323 324 2.190578 CATCCCAGCCGAACCTCC 59.809 66.667 0.00 0.00 0.00 4.30
324 325 1.450312 CACATCCCAGCCGAACCTC 60.450 63.158 0.00 0.00 0.00 3.85
325 326 2.224159 ACACATCCCAGCCGAACCT 61.224 57.895 0.00 0.00 0.00 3.50
326 327 2.040544 CACACATCCCAGCCGAACC 61.041 63.158 0.00 0.00 0.00 3.62
327 328 2.690778 GCACACATCCCAGCCGAAC 61.691 63.158 0.00 0.00 0.00 3.95
328 329 2.359850 GCACACATCCCAGCCGAA 60.360 61.111 0.00 0.00 0.00 4.30
329 330 4.758251 CGCACACATCCCAGCCGA 62.758 66.667 0.00 0.00 0.00 5.54
331 332 3.434319 CACGCACACATCCCAGCC 61.434 66.667 0.00 0.00 0.00 4.85
332 333 4.107051 GCACGCACACATCCCAGC 62.107 66.667 0.00 0.00 0.00 4.85
333 334 3.792047 CGCACGCACACATCCCAG 61.792 66.667 0.00 0.00 0.00 4.45
334 335 4.617520 ACGCACGCACACATCCCA 62.618 61.111 0.00 0.00 0.00 4.37
335 336 4.088762 CACGCACGCACACATCCC 62.089 66.667 0.00 0.00 0.00 3.85
336 337 4.741781 GCACGCACGCACACATCC 62.742 66.667 0.00 0.00 0.00 3.51
345 346 3.710381 AAACACACACGCACGCACG 62.710 57.895 0.00 0.00 39.50 5.34
346 347 1.068287 AAAAACACACACGCACGCAC 61.068 50.000 0.00 0.00 0.00 5.34
347 348 1.210413 AAAAACACACACGCACGCA 59.790 47.368 0.00 0.00 0.00 5.24
348 349 4.065238 AAAAACACACACGCACGC 57.935 50.000 0.00 0.00 0.00 5.34
363 364 3.553828 AGAGGAGACACAACCGAAAAA 57.446 42.857 0.00 0.00 0.00 1.94
364 365 3.202906 CAAGAGGAGACACAACCGAAAA 58.797 45.455 0.00 0.00 0.00 2.29
365 366 2.169769 ACAAGAGGAGACACAACCGAAA 59.830 45.455 0.00 0.00 0.00 3.46
366 367 1.760613 ACAAGAGGAGACACAACCGAA 59.239 47.619 0.00 0.00 0.00 4.30
367 368 1.410004 ACAAGAGGAGACACAACCGA 58.590 50.000 0.00 0.00 0.00 4.69
368 369 2.240493 AACAAGAGGAGACACAACCG 57.760 50.000 0.00 0.00 0.00 4.44
369 370 2.879026 GGAAACAAGAGGAGACACAACC 59.121 50.000 0.00 0.00 0.00 3.77
370 371 2.879026 GGGAAACAAGAGGAGACACAAC 59.121 50.000 0.00 0.00 0.00 3.32
371 372 2.158667 GGGGAAACAAGAGGAGACACAA 60.159 50.000 0.00 0.00 0.00 3.33
372 373 1.420138 GGGGAAACAAGAGGAGACACA 59.580 52.381 0.00 0.00 0.00 3.72
373 374 1.271434 GGGGGAAACAAGAGGAGACAC 60.271 57.143 0.00 0.00 0.00 3.67
374 375 1.064825 GGGGGAAACAAGAGGAGACA 58.935 55.000 0.00 0.00 0.00 3.41
375 376 0.036294 CGGGGGAAACAAGAGGAGAC 60.036 60.000 0.00 0.00 0.00 3.36
376 377 0.473117 ACGGGGGAAACAAGAGGAGA 60.473 55.000 0.00 0.00 0.00 3.71
377 378 0.321653 CACGGGGGAAACAAGAGGAG 60.322 60.000 0.00 0.00 0.00 3.69
378 379 1.057851 ACACGGGGGAAACAAGAGGA 61.058 55.000 0.00 0.00 0.00 3.71
379 380 0.688487 TACACGGGGGAAACAAGAGG 59.312 55.000 0.00 0.00 0.00 3.69
380 381 2.781681 ATACACGGGGGAAACAAGAG 57.218 50.000 0.00 0.00 0.00 2.85
381 382 2.640826 AGAATACACGGGGGAAACAAGA 59.359 45.455 0.00 0.00 0.00 3.02
382 383 2.747446 CAGAATACACGGGGGAAACAAG 59.253 50.000 0.00 0.00 0.00 3.16
383 384 2.553466 CCAGAATACACGGGGGAAACAA 60.553 50.000 0.00 0.00 0.00 2.83
384 385 1.003812 CCAGAATACACGGGGGAAACA 59.996 52.381 0.00 0.00 0.00 2.83
385 386 1.003928 ACCAGAATACACGGGGGAAAC 59.996 52.381 0.00 0.00 0.00 2.78
386 387 1.364269 ACCAGAATACACGGGGGAAA 58.636 50.000 0.00 0.00 0.00 3.13
387 388 1.279846 GAACCAGAATACACGGGGGAA 59.720 52.381 0.00 0.00 0.00 3.97
388 389 0.906775 GAACCAGAATACACGGGGGA 59.093 55.000 0.00 0.00 0.00 4.81
389 390 0.616371 TGAACCAGAATACACGGGGG 59.384 55.000 0.00 0.00 0.00 5.40
390 391 1.278127 AGTGAACCAGAATACACGGGG 59.722 52.381 0.00 0.00 38.15 5.73
391 392 2.742053 CAAGTGAACCAGAATACACGGG 59.258 50.000 0.00 0.00 38.15 5.28
392 393 3.659786 TCAAGTGAACCAGAATACACGG 58.340 45.455 0.00 0.00 38.15 4.94
393 394 5.018695 GTTCAAGTGAACCAGAATACACG 57.981 43.478 12.29 0.00 46.42 4.49
405 406 7.280876 GCTCCATACAAGATATGTTCAAGTGAA 59.719 37.037 0.00 0.00 43.63 3.18
406 407 6.763135 GCTCCATACAAGATATGTTCAAGTGA 59.237 38.462 0.00 0.00 43.63 3.41
407 408 6.765036 AGCTCCATACAAGATATGTTCAAGTG 59.235 38.462 0.00 0.00 43.63 3.16
408 409 6.765036 CAGCTCCATACAAGATATGTTCAAGT 59.235 38.462 0.00 0.00 43.63 3.16
409 410 6.293298 GCAGCTCCATACAAGATATGTTCAAG 60.293 42.308 0.00 0.00 43.63 3.02
410 411 5.528690 GCAGCTCCATACAAGATATGTTCAA 59.471 40.000 0.00 0.00 43.63 2.69
411 412 5.059161 GCAGCTCCATACAAGATATGTTCA 58.941 41.667 0.00 0.00 43.63 3.18
412 413 4.151335 CGCAGCTCCATACAAGATATGTTC 59.849 45.833 0.00 0.00 43.63 3.18
413 414 4.060900 CGCAGCTCCATACAAGATATGTT 58.939 43.478 0.00 0.00 43.63 2.71
414 415 3.321968 TCGCAGCTCCATACAAGATATGT 59.678 43.478 0.00 0.00 46.36 2.29
415 416 3.917988 TCGCAGCTCCATACAAGATATG 58.082 45.455 0.00 0.00 0.00 1.78
416 417 3.056250 CCTCGCAGCTCCATACAAGATAT 60.056 47.826 0.00 0.00 0.00 1.63
417 418 2.297315 CCTCGCAGCTCCATACAAGATA 59.703 50.000 0.00 0.00 0.00 1.98
418 419 1.069823 CCTCGCAGCTCCATACAAGAT 59.930 52.381 0.00 0.00 0.00 2.40
419 420 0.461548 CCTCGCAGCTCCATACAAGA 59.538 55.000 0.00 0.00 0.00 3.02
420 421 1.156645 GCCTCGCAGCTCCATACAAG 61.157 60.000 0.00 0.00 0.00 3.16
421 422 1.153369 GCCTCGCAGCTCCATACAA 60.153 57.895 0.00 0.00 0.00 2.41
422 423 1.617018 AAGCCTCGCAGCTCCATACA 61.617 55.000 0.00 0.00 44.11 2.29
423 424 0.878086 GAAGCCTCGCAGCTCCATAC 60.878 60.000 0.00 0.00 44.11 2.39
424 425 1.045350 AGAAGCCTCGCAGCTCCATA 61.045 55.000 0.00 0.00 44.11 2.74
425 426 1.045350 TAGAAGCCTCGCAGCTCCAT 61.045 55.000 0.00 0.00 44.11 3.41
426 427 1.670949 CTAGAAGCCTCGCAGCTCCA 61.671 60.000 0.00 0.00 44.11 3.86
427 428 1.067250 CTAGAAGCCTCGCAGCTCC 59.933 63.158 0.00 0.00 44.11 4.70
428 429 1.067250 CCTAGAAGCCTCGCAGCTC 59.933 63.158 0.00 0.00 44.11 4.09
430 431 2.587473 GCCTAGAAGCCTCGCAGC 60.587 66.667 0.00 0.00 0.00 5.25
431 432 0.391661 TTTGCCTAGAAGCCTCGCAG 60.392 55.000 0.00 0.00 31.87 5.18
432 433 0.253044 ATTTGCCTAGAAGCCTCGCA 59.747 50.000 0.00 0.00 0.00 5.10
433 434 1.332065 GAATTTGCCTAGAAGCCTCGC 59.668 52.381 0.00 0.00 0.00 5.03
434 435 1.594862 CGAATTTGCCTAGAAGCCTCG 59.405 52.381 0.00 0.00 0.00 4.63
435 436 2.906354 TCGAATTTGCCTAGAAGCCTC 58.094 47.619 0.00 0.00 0.00 4.70
436 437 3.118261 TCATCGAATTTGCCTAGAAGCCT 60.118 43.478 0.00 0.00 0.00 4.58
437 438 3.206150 TCATCGAATTTGCCTAGAAGCC 58.794 45.455 0.00 0.00 0.00 4.35
438 439 4.882671 TTCATCGAATTTGCCTAGAAGC 57.117 40.909 0.00 0.00 0.00 3.86
444 445 8.517878 CCTGAATATATTTCATCGAATTTGCCT 58.482 33.333 0.00 0.00 0.00 4.75
445 446 8.299570 ACCTGAATATATTTCATCGAATTTGCC 58.700 33.333 0.00 0.00 0.00 4.52
446 447 9.121517 CACCTGAATATATTTCATCGAATTTGC 57.878 33.333 0.00 0.00 0.00 3.68
447 448 9.616634 CCACCTGAATATATTTCATCGAATTTG 57.383 33.333 0.00 0.00 0.00 2.32
448 449 9.354673 ACCACCTGAATATATTTCATCGAATTT 57.645 29.630 0.00 0.00 0.00 1.82
449 450 8.924511 ACCACCTGAATATATTTCATCGAATT 57.075 30.769 0.00 0.00 0.00 2.17
450 451 8.786898 CAACCACCTGAATATATTTCATCGAAT 58.213 33.333 0.00 0.00 0.00 3.34
451 452 7.990314 TCAACCACCTGAATATATTTCATCGAA 59.010 33.333 0.00 0.00 0.00 3.71
452 453 7.505258 TCAACCACCTGAATATATTTCATCGA 58.495 34.615 0.00 0.00 0.00 3.59
453 454 7.571983 GCTCAACCACCTGAATATATTTCATCG 60.572 40.741 0.00 0.00 0.00 3.84
454 455 7.308830 GGCTCAACCACCTGAATATATTTCATC 60.309 40.741 0.00 0.00 38.86 2.92
455 456 6.491403 GGCTCAACCACCTGAATATATTTCAT 59.509 38.462 0.00 0.00 38.86 2.57
456 457 5.827797 GGCTCAACCACCTGAATATATTTCA 59.172 40.000 0.00 0.00 38.86 2.69
457 458 5.241728 GGGCTCAACCACCTGAATATATTTC 59.758 44.000 0.00 0.00 42.05 2.17
458 459 5.140454 GGGCTCAACCACCTGAATATATTT 58.860 41.667 0.00 0.00 42.05 1.40
459 460 4.447762 GGGGCTCAACCACCTGAATATATT 60.448 45.833 0.00 0.00 42.05 1.28
460 461 3.074538 GGGGCTCAACCACCTGAATATAT 59.925 47.826 0.00 0.00 42.05 0.86
461 462 2.441750 GGGGCTCAACCACCTGAATATA 59.558 50.000 0.00 0.00 42.05 0.86
462 463 1.215423 GGGGCTCAACCACCTGAATAT 59.785 52.381 0.00 0.00 42.05 1.28
463 464 0.623723 GGGGCTCAACCACCTGAATA 59.376 55.000 0.00 0.00 42.05 1.75
464 465 1.384191 GGGGCTCAACCACCTGAAT 59.616 57.895 0.00 0.00 42.05 2.57
465 466 2.843545 GGGGCTCAACCACCTGAA 59.156 61.111 0.00 0.00 42.05 3.02
869 4841 2.206576 ATGCTTTTGACCCTCCAGTC 57.793 50.000 0.00 0.00 37.28 3.51
910 4887 3.920144 GCTAGATGCTGCTTGCTTG 57.080 52.632 0.00 0.00 43.37 4.01
930 4907 4.619320 TGGGTTGGGGCTGCTTGG 62.619 66.667 0.00 0.00 0.00 3.61
931 4908 2.523902 TTGGGTTGGGGCTGCTTG 60.524 61.111 0.00 0.00 0.00 4.01
937 4918 0.250295 GCTTTTTCTTGGGTTGGGGC 60.250 55.000 0.00 0.00 0.00 5.80
1299 5294 4.711949 CAGGCGTTGGGCAGCTCT 62.712 66.667 0.00 0.00 46.16 4.09
1655 5674 1.218316 GTTCCAGTCCAGTAGCCGG 59.782 63.158 0.00 0.00 0.00 6.13
1704 6302 8.980143 AGGAAATTCAAATATACCACAAAACG 57.020 30.769 0.00 0.00 0.00 3.60
1723 6325 6.614906 TGCCCAATGATAAACCAATAGGAAAT 59.385 34.615 0.00 0.00 38.69 2.17
1931 6567 8.058667 TGACATCACATGCTTATCAGAAAAAT 57.941 30.769 0.00 0.00 0.00 1.82
1937 6573 5.575957 GGTTTGACATCACATGCTTATCAG 58.424 41.667 0.00 0.00 0.00 2.90
1950 6726 3.800506 CCTTATACGACCGGTTTGACATC 59.199 47.826 9.42 0.00 0.00 3.06
1951 6727 3.788937 CCTTATACGACCGGTTTGACAT 58.211 45.455 9.42 6.70 0.00 3.06
1958 6734 1.117150 ATGTGCCTTATACGACCGGT 58.883 50.000 6.92 6.92 0.00 5.28
1968 6744 0.476338 ACACCACCACATGTGCCTTA 59.524 50.000 20.81 0.00 44.01 2.69
1977 6753 1.821753 CAAGAAAACCACACCACCACA 59.178 47.619 0.00 0.00 0.00 4.17
1982 6758 0.453793 CGCACAAGAAAACCACACCA 59.546 50.000 0.00 0.00 0.00 4.17
2029 6820 1.680105 GAAGGACGAAAATCGCGCGA 61.680 55.000 36.65 36.65 45.12 5.87
2076 6867 2.395690 CAAACCGAGACGCGATGC 59.604 61.111 15.93 0.85 44.57 3.91
2100 7537 2.097629 CAGAGGAAGCTTCACATGCATG 59.902 50.000 27.02 25.09 0.00 4.06
2150 7620 0.951558 AGACGGAACCAAATGTGTGC 59.048 50.000 0.00 0.00 0.00 4.57
2176 7646 3.376078 AACAGCTTGGCATGCCGG 61.376 61.111 30.87 25.31 39.42 6.13
2200 8016 1.226746 ACAAGCCTTCAAGTACGTGC 58.773 50.000 3.67 0.00 0.00 5.34
2216 8032 2.294791 CGGCAACATTACCAAGGAACAA 59.705 45.455 0.00 0.00 0.00 2.83
2228 8045 1.673993 TCGTGATGGCGGCAACATT 60.674 52.632 24.15 3.48 0.00 2.71
2240 8057 1.067212 GAGGTTATCGCCTGTCGTGAT 59.933 52.381 0.00 0.00 44.09 3.06
2245 8062 0.105039 CCCAGAGGTTATCGCCTGTC 59.895 60.000 0.00 0.00 39.34 3.51
2248 8065 0.325296 TGTCCCAGAGGTTATCGCCT 60.325 55.000 0.00 0.00 42.53 5.52
2250 8067 0.105039 CCTGTCCCAGAGGTTATCGC 59.895 60.000 0.00 0.00 32.44 4.58
2252 8069 1.414550 GCTCCTGTCCCAGAGGTTATC 59.585 57.143 0.00 0.00 32.44 1.75
2267 8084 1.972872 CCACTCAACAAGTTGCTCCT 58.027 50.000 8.04 0.00 40.24 3.69
2281 8098 0.813821 GCAGGAAGAAATGGCCACTC 59.186 55.000 8.16 8.30 0.00 3.51
2287 8104 4.019174 ACAATAGTGGCAGGAAGAAATGG 58.981 43.478 0.00 0.00 0.00 3.16
2299 8116 3.334272 GCCATCGTTAACAATAGTGGC 57.666 47.619 15.98 15.98 43.09 5.01
2323 8140 9.764363 ATTGAGAGAAATATAAATAGTGCGTGA 57.236 29.630 0.00 0.00 0.00 4.35
2364 8264 4.406648 TGTGGTAGCATCTATGTTGAGG 57.593 45.455 0.00 0.00 0.00 3.86
2453 8365 1.187974 CATGTGGATGGGTTGCATGT 58.812 50.000 0.00 0.00 34.10 3.21
2454 8366 0.462375 CCATGTGGATGGGTTGCATG 59.538 55.000 0.00 0.00 45.11 4.06
2455 8367 2.904835 CCATGTGGATGGGTTGCAT 58.095 52.632 0.00 0.00 45.11 3.96
2456 8368 4.438255 CCATGTGGATGGGTTGCA 57.562 55.556 0.00 0.00 45.11 4.08
2474 8386 3.651206 TGTGGCAAACATGCATTACTTG 58.349 40.909 0.00 2.01 32.36 3.16
2543 8455 9.281075 CATGACAACATGTGTAATCTTGTATTG 57.719 33.333 0.00 0.00 46.01 1.90
2551 8463 9.015695 TGGCAGATCATGACAACATGTGTAATC 62.016 40.741 0.00 0.00 46.85 1.75
2576 9077 6.403200 CGGACAAAAATATACTCTGGGTTGTG 60.403 42.308 0.00 0.00 0.00 3.33
2583 9084 6.455646 GCACACTCGGACAAAAATATACTCTG 60.456 42.308 0.00 0.00 0.00 3.35
2590 9091 3.628032 TGTTGCACACTCGGACAAAAATA 59.372 39.130 0.00 0.00 0.00 1.40
2592 9093 1.813178 TGTTGCACACTCGGACAAAAA 59.187 42.857 0.00 0.00 0.00 1.94
2601 9102 1.726791 CCGTGACTATGTTGCACACTC 59.273 52.381 0.00 0.00 32.96 3.51
2603 9104 1.508632 ACCGTGACTATGTTGCACAC 58.491 50.000 0.00 0.00 32.96 3.82
2613 9114 5.229423 ACGCTTTGTTATTAACCGTGACTA 58.771 37.500 4.17 0.00 0.00 2.59
2615 9116 4.394099 ACGCTTTGTTATTAACCGTGAC 57.606 40.909 4.17 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.