Multiple sequence alignment - TraesCS5D01G438900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G438900 chr5D 100.000 3748 0 0 1 3748 492570421 492566674 0.000000e+00 6922.0
1 TraesCS5D01G438900 chr5D 88.634 2182 211 25 828 3001 238177104 238179256 0.000000e+00 2621.0
2 TraesCS5D01G438900 chr5D 84.009 1801 219 29 1279 3063 492593457 492591710 0.000000e+00 1666.0
3 TraesCS5D01G438900 chr5D 90.667 525 34 1 760 1269 492602044 492601520 0.000000e+00 684.0
4 TraesCS5D01G438900 chr5D 93.925 214 11 2 177 389 492602526 492602314 4.670000e-84 322.0
5 TraesCS5D01G438900 chr5D 87.879 231 20 2 537 759 492602319 492602089 7.980000e-67 265.0
6 TraesCS5D01G438900 chr5B 93.115 2469 109 25 760 3193 607866272 607868714 0.000000e+00 3561.0
7 TraesCS5D01G438900 chr5B 89.181 2015 197 18 828 2835 267301915 267299915 0.000000e+00 2494.0
8 TraesCS5D01G438900 chr5B 85.314 2247 264 34 815 3042 607844889 607847088 0.000000e+00 2261.0
9 TraesCS5D01G438900 chr5B 83.282 2273 280 43 804 3063 607838625 607840810 0.000000e+00 2001.0
10 TraesCS5D01G438900 chr5B 94.558 147 6 2 177 321 607844157 607844303 3.770000e-55 226.0
11 TraesCS5D01G438900 chr5B 93.197 147 8 1 177 321 607837959 607838105 8.150000e-52 215.0
12 TraesCS5D01G438900 chr5B 90.370 135 13 0 618 752 607838152 607838286 1.070000e-40 178.0
13 TraesCS5D01G438900 chr5B 89.600 125 12 1 629 752 607844577 607844701 1.390000e-34 158.0
14 TraesCS5D01G438900 chr5B 88.235 102 11 1 3399 3500 267299657 267299557 1.830000e-23 121.0
15 TraesCS5D01G438900 chr5B 92.683 82 6 0 678 759 607866146 607866227 6.580000e-23 119.0
16 TraesCS5D01G438900 chr5B 88.542 96 8 1 1 93 607866057 607866152 3.060000e-21 113.0
17 TraesCS5D01G438900 chr5B 87.952 83 6 2 3547 3625 699434867 699434949 1.110000e-15 95.3
18 TraesCS5D01G438900 chr5B 100.000 35 0 0 760 794 607838338 607838372 8.690000e-07 65.8
19 TraesCS5D01G438900 chr5A 84.850 2825 293 47 760 3501 615308699 615311471 0.000000e+00 2721.0
20 TraesCS5D01G438900 chr5A 88.925 2131 208 17 828 2949 316514430 316512319 0.000000e+00 2603.0
21 TraesCS5D01G438900 chr5A 94.508 1402 76 1 948 2348 615304932 615306333 0.000000e+00 2161.0
22 TraesCS5D01G438900 chr5A 83.905 2274 290 30 804 3063 615297701 615299912 0.000000e+00 2102.0
23 TraesCS5D01G438900 chr5A 95.495 222 9 1 539 759 615308433 615308654 1.660000e-93 353.0
24 TraesCS5D01G438900 chr5A 89.950 199 19 1 555 752 615297319 615297517 4.800000e-64 255.0
25 TraesCS5D01G438900 chr5A 95.302 149 7 0 1 149 615302267 615302415 1.740000e-58 237.0
26 TraesCS5D01G438900 chr5A 93.151 146 9 1 177 321 615308231 615308376 2.930000e-51 213.0
27 TraesCS5D01G438900 chr5A 97.727 44 1 0 3631 3674 615311547 615311590 4.010000e-10 76.8
28 TraesCS5D01G438900 chr5A 81.915 94 12 3 3536 3625 680578087 680578179 1.440000e-09 75.0
29 TraesCS5D01G438900 chr6A 93.407 91 6 0 178 268 336616385 336616475 6.530000e-28 135.0
30 TraesCS5D01G438900 chr6A 88.095 84 6 2 3547 3626 601226024 601226107 3.080000e-16 97.1
31 TraesCS5D01G438900 chr6A 85.882 85 7 3 3549 3628 551655163 551655247 6.670000e-13 86.1
32 TraesCS5D01G438900 chr7A 89.286 84 5 2 3546 3625 254896116 254896033 6.620000e-18 102.0
33 TraesCS5D01G438900 chr1B 85.437 103 9 4 3531 3627 380465755 380465857 6.620000e-18 102.0
34 TraesCS5D01G438900 chr2D 89.157 83 4 3 3549 3626 601701210 601701128 8.570000e-17 99.0
35 TraesCS5D01G438900 chr2A 89.024 82 4 3 3549 3625 734908594 734908513 3.080000e-16 97.1
36 TraesCS5D01G438900 chr3B 84.524 84 9 2 3547 3626 409602558 409602641 3.100000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G438900 chr5D 492566674 492570421 3747 True 6922.000000 6922 100.000000 1 3748 1 chr5D.!!$R1 3747
1 TraesCS5D01G438900 chr5D 238177104 238179256 2152 False 2621.000000 2621 88.634000 828 3001 1 chr5D.!!$F1 2173
2 TraesCS5D01G438900 chr5D 492591710 492593457 1747 True 1666.000000 1666 84.009000 1279 3063 1 chr5D.!!$R2 1784
3 TraesCS5D01G438900 chr5D 492601520 492602526 1006 True 423.666667 684 90.823667 177 1269 3 chr5D.!!$R3 1092
4 TraesCS5D01G438900 chr5B 267299557 267301915 2358 True 1307.500000 2494 88.708000 828 3500 2 chr5B.!!$R1 2672
5 TraesCS5D01G438900 chr5B 607866057 607868714 2657 False 1264.333333 3561 91.446667 1 3193 3 chr5B.!!$F3 3192
6 TraesCS5D01G438900 chr5B 607837959 607847088 9129 False 729.257143 2261 90.903000 177 3063 7 chr5B.!!$F2 2886
7 TraesCS5D01G438900 chr5A 316512319 316514430 2111 True 2603.000000 2603 88.925000 828 2949 1 chr5A.!!$R1 2121
8 TraesCS5D01G438900 chr5A 615297319 615311590 14271 False 1014.850000 2721 91.861000 1 3674 8 chr5A.!!$F2 3673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
465 468 0.036388 ATGAGACGGCGGTGACAATT 60.036 50.0 13.24 0.0 0.0 2.32 F
468 471 0.036388 AGACGGCGGTGACAATTGAT 60.036 50.0 13.59 0.0 0.0 2.57 F
477 480 0.038890 TGACAATTGATGCGGGGGAA 59.961 50.0 13.59 0.0 0.0 3.97 F
501 504 0.191064 AGAGGGTGGTGAAGGAGACA 59.809 55.0 0.00 0.0 0.0 3.41 F
2454 16099 0.321919 GGCAACTGCTGGATCACTGA 60.322 55.0 1.06 0.0 41.7 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2426 16068 1.155042 CAGCAGTTGCCTTCTCTGAC 58.845 55.000 0.0 0.0 43.38 3.51 R
2438 16080 3.430042 ACATTCAGTGATCCAGCAGTT 57.570 42.857 0.0 0.0 0.00 3.16 R
2468 16113 2.001361 GATGGTGCTGCTGATGGTGC 62.001 60.000 0.0 0.0 0.00 5.01 R
2529 16174 0.823356 TTCACAAAGCCTGTCTGCCC 60.823 55.000 0.0 0.0 35.47 5.36 R
3728 17442 0.045162 AATTTACGGGGAGGGGGAGA 59.955 55.000 0.0 0.0 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.680922 TGGGTGAATCACACAACAACAATTC 60.681 40.000 16.89 0.00 45.34 2.17
35 36 7.808830 TGGGTGAATCACACAACAACAATTCT 61.809 38.462 16.89 0.00 45.34 2.40
47 48 7.383029 CACAACAACAATTCTGACATAAGCAAT 59.617 33.333 0.00 0.00 0.00 3.56
48 49 7.596248 ACAACAACAATTCTGACATAAGCAATC 59.404 33.333 0.00 0.00 0.00 2.67
56 57 6.974932 TCTGACATAAGCAATCTCTGAAAC 57.025 37.500 0.00 0.00 0.00 2.78
77 78 2.607187 CTGTTCGGTGACTATGTGACC 58.393 52.381 0.00 0.00 36.49 4.02
85 86 4.142026 CGGTGACTATGTGACCATCCTTTA 60.142 45.833 7.08 0.00 39.74 1.85
86 87 5.625886 CGGTGACTATGTGACCATCCTTTAA 60.626 44.000 7.08 0.00 39.74 1.52
87 88 6.177610 GGTGACTATGTGACCATCCTTTAAA 58.822 40.000 1.63 0.00 39.55 1.52
88 89 6.316390 GGTGACTATGTGACCATCCTTTAAAG 59.684 42.308 8.32 8.32 39.55 1.85
89 90 5.880332 TGACTATGTGACCATCCTTTAAAGC 59.120 40.000 9.86 0.00 32.29 3.51
90 91 5.815581 ACTATGTGACCATCCTTTAAAGCA 58.184 37.500 9.86 0.00 32.29 3.91
91 92 5.882557 ACTATGTGACCATCCTTTAAAGCAG 59.117 40.000 9.86 1.74 32.29 4.24
92 93 4.098914 TGTGACCATCCTTTAAAGCAGT 57.901 40.909 9.86 3.84 0.00 4.40
93 94 5.235850 TGTGACCATCCTTTAAAGCAGTA 57.764 39.130 9.86 0.00 0.00 2.74
94 95 5.626142 TGTGACCATCCTTTAAAGCAGTAA 58.374 37.500 9.86 0.00 0.00 2.24
95 96 6.065374 TGTGACCATCCTTTAAAGCAGTAAA 58.935 36.000 9.86 0.00 0.00 2.01
96 97 6.016610 TGTGACCATCCTTTAAAGCAGTAAAC 60.017 38.462 9.86 3.52 0.00 2.01
97 98 6.206829 GTGACCATCCTTTAAAGCAGTAAACT 59.793 38.462 9.86 0.00 0.00 2.66
98 99 7.389607 GTGACCATCCTTTAAAGCAGTAAACTA 59.610 37.037 9.86 0.00 0.00 2.24
99 100 8.107095 TGACCATCCTTTAAAGCAGTAAACTAT 58.893 33.333 9.86 0.00 0.00 2.12
100 101 8.281212 ACCATCCTTTAAAGCAGTAAACTATG 57.719 34.615 9.86 2.50 0.00 2.23
101 102 7.339466 ACCATCCTTTAAAGCAGTAAACTATGG 59.661 37.037 9.86 16.81 36.85 2.74
102 103 7.556275 CCATCCTTTAAAGCAGTAAACTATGGA 59.444 37.037 9.86 0.00 35.03 3.41
103 104 9.125026 CATCCTTTAAAGCAGTAAACTATGGAT 57.875 33.333 9.86 0.80 30.30 3.41
104 105 8.506168 TCCTTTAAAGCAGTAAACTATGGATG 57.494 34.615 9.86 0.00 0.00 3.51
105 106 7.067008 TCCTTTAAAGCAGTAAACTATGGATGC 59.933 37.037 9.86 0.00 0.00 3.91
106 107 7.067494 CCTTTAAAGCAGTAAACTATGGATGCT 59.933 37.037 9.86 0.00 45.39 3.79
107 108 9.109393 CTTTAAAGCAGTAAACTATGGATGCTA 57.891 33.333 1.47 0.00 42.83 3.49
108 109 6.927294 AAAGCAGTAAACTATGGATGCTAC 57.073 37.500 0.00 0.00 42.83 3.58
109 110 5.614324 AGCAGTAAACTATGGATGCTACA 57.386 39.130 0.00 0.00 41.90 2.74
110 111 5.989477 AGCAGTAAACTATGGATGCTACAA 58.011 37.500 0.00 0.00 41.90 2.41
111 112 6.595682 AGCAGTAAACTATGGATGCTACAAT 58.404 36.000 0.00 0.00 41.90 2.71
112 113 6.708054 AGCAGTAAACTATGGATGCTACAATC 59.292 38.462 0.00 0.00 41.90 2.67
113 114 6.483307 GCAGTAAACTATGGATGCTACAATCA 59.517 38.462 0.00 0.00 0.00 2.57
114 115 7.012327 GCAGTAAACTATGGATGCTACAATCAA 59.988 37.037 0.00 0.00 0.00 2.57
115 116 8.892723 CAGTAAACTATGGATGCTACAATCAAA 58.107 33.333 0.00 0.00 0.00 2.69
116 117 8.893727 AGTAAACTATGGATGCTACAATCAAAC 58.106 33.333 0.00 0.00 0.00 2.93
117 118 7.701539 AAACTATGGATGCTACAATCAAACA 57.298 32.000 0.00 0.00 0.00 2.83
118 119 7.886629 AACTATGGATGCTACAATCAAACAT 57.113 32.000 0.00 0.00 0.00 2.71
119 120 7.268199 ACTATGGATGCTACAATCAAACATG 57.732 36.000 0.00 0.00 0.00 3.21
120 121 4.374843 TGGATGCTACAATCAAACATGC 57.625 40.909 0.00 0.00 0.00 4.06
121 122 3.762823 TGGATGCTACAATCAAACATGCA 59.237 39.130 0.00 0.00 36.84 3.96
122 123 4.220163 TGGATGCTACAATCAAACATGCAA 59.780 37.500 0.00 0.00 36.35 4.08
123 124 5.170021 GGATGCTACAATCAAACATGCAAA 58.830 37.500 0.00 0.00 32.66 3.68
124 125 5.638657 GGATGCTACAATCAAACATGCAAAA 59.361 36.000 0.00 0.00 32.66 2.44
125 126 6.183360 GGATGCTACAATCAAACATGCAAAAG 60.183 38.462 0.00 0.00 32.66 2.27
126 127 5.840715 TGCTACAATCAAACATGCAAAAGA 58.159 33.333 0.00 0.00 0.00 2.52
127 128 5.691305 TGCTACAATCAAACATGCAAAAGAC 59.309 36.000 0.00 0.00 0.00 3.01
128 129 5.691305 GCTACAATCAAACATGCAAAAGACA 59.309 36.000 0.00 0.00 0.00 3.41
129 130 5.971895 ACAATCAAACATGCAAAAGACAC 57.028 34.783 0.00 0.00 0.00 3.67
130 131 4.503734 ACAATCAAACATGCAAAAGACACG 59.496 37.500 0.00 0.00 0.00 4.49
131 132 3.077229 TCAAACATGCAAAAGACACGG 57.923 42.857 0.00 0.00 0.00 4.94
132 133 2.425312 TCAAACATGCAAAAGACACGGT 59.575 40.909 0.00 0.00 0.00 4.83
133 134 3.119316 TCAAACATGCAAAAGACACGGTT 60.119 39.130 0.00 0.00 0.00 4.44
134 135 3.518634 AACATGCAAAAGACACGGTTT 57.481 38.095 0.00 0.00 0.00 3.27
135 136 2.808244 ACATGCAAAAGACACGGTTTG 58.192 42.857 0.00 0.00 37.70 2.93
136 137 2.425312 ACATGCAAAAGACACGGTTTGA 59.575 40.909 0.00 0.00 36.96 2.69
137 138 3.068024 ACATGCAAAAGACACGGTTTGAT 59.932 39.130 0.00 0.00 36.96 2.57
138 139 3.791973 TGCAAAAGACACGGTTTGATT 57.208 38.095 0.51 0.00 36.96 2.57
139 140 3.443037 TGCAAAAGACACGGTTTGATTG 58.557 40.909 0.51 0.00 36.96 2.67
140 141 2.794350 GCAAAAGACACGGTTTGATTGG 59.206 45.455 0.51 0.00 36.96 3.16
141 142 3.380142 CAAAAGACACGGTTTGATTGGG 58.620 45.455 0.00 0.00 36.96 4.12
142 143 2.358322 AAGACACGGTTTGATTGGGT 57.642 45.000 0.00 0.00 0.00 4.51
143 144 3.495434 AAGACACGGTTTGATTGGGTA 57.505 42.857 0.00 0.00 0.00 3.69
144 145 3.053831 AGACACGGTTTGATTGGGTAG 57.946 47.619 0.00 0.00 0.00 3.18
145 146 2.635915 AGACACGGTTTGATTGGGTAGA 59.364 45.455 0.00 0.00 0.00 2.59
146 147 3.071892 AGACACGGTTTGATTGGGTAGAA 59.928 43.478 0.00 0.00 0.00 2.10
147 148 3.408634 ACACGGTTTGATTGGGTAGAAG 58.591 45.455 0.00 0.00 0.00 2.85
148 149 3.071892 ACACGGTTTGATTGGGTAGAAGA 59.928 43.478 0.00 0.00 0.00 2.87
149 150 4.069304 CACGGTTTGATTGGGTAGAAGAA 58.931 43.478 0.00 0.00 0.00 2.52
150 151 4.517453 CACGGTTTGATTGGGTAGAAGAAA 59.483 41.667 0.00 0.00 0.00 2.52
151 152 4.760204 ACGGTTTGATTGGGTAGAAGAAAG 59.240 41.667 0.00 0.00 0.00 2.62
152 153 4.379499 CGGTTTGATTGGGTAGAAGAAAGC 60.379 45.833 0.00 0.00 0.00 3.51
153 154 4.522789 GGTTTGATTGGGTAGAAGAAAGCA 59.477 41.667 0.00 0.00 0.00 3.91
154 155 5.335976 GGTTTGATTGGGTAGAAGAAAGCAG 60.336 44.000 0.00 0.00 0.00 4.24
155 156 4.640771 TGATTGGGTAGAAGAAAGCAGT 57.359 40.909 0.00 0.00 0.00 4.40
156 157 5.755409 TGATTGGGTAGAAGAAAGCAGTA 57.245 39.130 0.00 0.00 0.00 2.74
157 158 6.121776 TGATTGGGTAGAAGAAAGCAGTAA 57.878 37.500 0.00 0.00 0.00 2.24
158 159 6.539173 TGATTGGGTAGAAGAAAGCAGTAAA 58.461 36.000 0.00 0.00 0.00 2.01
159 160 6.430000 TGATTGGGTAGAAGAAAGCAGTAAAC 59.570 38.462 0.00 0.00 0.00 2.01
160 161 5.562298 TGGGTAGAAGAAAGCAGTAAACT 57.438 39.130 0.00 0.00 0.00 2.66
161 162 6.675413 TGGGTAGAAGAAAGCAGTAAACTA 57.325 37.500 0.00 0.00 0.00 2.24
162 163 7.253905 TGGGTAGAAGAAAGCAGTAAACTAT 57.746 36.000 0.00 0.00 0.00 2.12
163 164 7.686434 TGGGTAGAAGAAAGCAGTAAACTATT 58.314 34.615 0.00 0.00 0.00 1.73
164 165 7.606456 TGGGTAGAAGAAAGCAGTAAACTATTG 59.394 37.037 0.00 0.00 0.00 1.90
165 166 7.065923 GGGTAGAAGAAAGCAGTAAACTATTGG 59.934 40.741 0.00 0.00 0.00 3.16
166 167 7.606839 GGTAGAAGAAAGCAGTAAACTATTGGT 59.393 37.037 0.00 0.00 0.00 3.67
167 168 7.440523 AGAAGAAAGCAGTAAACTATTGGTG 57.559 36.000 0.00 0.00 0.00 4.17
168 169 5.629079 AGAAAGCAGTAAACTATTGGTGC 57.371 39.130 0.00 0.00 0.00 5.01
169 170 5.316987 AGAAAGCAGTAAACTATTGGTGCT 58.683 37.500 0.00 0.00 39.34 4.40
170 171 6.472887 AGAAAGCAGTAAACTATTGGTGCTA 58.527 36.000 0.00 0.00 37.71 3.49
171 172 6.371825 AGAAAGCAGTAAACTATTGGTGCTAC 59.628 38.462 0.00 0.00 37.71 3.58
172 173 5.160607 AGCAGTAAACTATTGGTGCTACA 57.839 39.130 0.00 0.00 37.23 2.74
173 174 5.556915 AGCAGTAAACTATTGGTGCTACAA 58.443 37.500 0.00 0.00 37.23 2.41
174 175 6.180472 AGCAGTAAACTATTGGTGCTACAAT 58.820 36.000 10.48 10.48 43.13 2.71
175 176 6.316390 AGCAGTAAACTATTGGTGCTACAATC 59.684 38.462 9.23 0.00 41.12 2.67
211 212 4.760715 AGTGCAATAATCTGAGATCCATGC 59.239 41.667 15.19 15.19 0.00 4.06
279 280 7.530010 ACATCCATACAACGAAATTGAGAAAG 58.470 34.615 0.00 0.00 41.23 2.62
343 346 2.683211 AAAGTGCTTGGATTGGGTCT 57.317 45.000 0.00 0.00 0.00 3.85
357 360 1.671379 GGTCTTGGCGTTGGGTCTC 60.671 63.158 0.00 0.00 0.00 3.36
396 399 4.908487 CGGGGAGGTAGGCGGCTA 62.908 72.222 15.70 15.70 0.00 3.93
397 400 2.918276 GGGGAGGTAGGCGGCTAG 60.918 72.222 20.35 0.00 0.00 3.42
398 401 2.197875 GGGAGGTAGGCGGCTAGA 59.802 66.667 20.35 0.00 0.00 2.43
399 402 1.228925 GGGAGGTAGGCGGCTAGAT 60.229 63.158 20.35 10.85 0.00 1.98
400 403 1.252215 GGGAGGTAGGCGGCTAGATC 61.252 65.000 20.35 18.63 0.00 2.75
401 404 0.251430 GGAGGTAGGCGGCTAGATCT 60.251 60.000 20.35 16.35 0.00 2.75
402 405 0.885196 GAGGTAGGCGGCTAGATCTG 59.115 60.000 20.35 0.00 0.00 2.90
403 406 0.540830 AGGTAGGCGGCTAGATCTGG 60.541 60.000 20.35 2.94 0.00 3.86
404 407 1.536943 GGTAGGCGGCTAGATCTGGG 61.537 65.000 20.35 0.00 0.00 4.45
405 408 1.908793 TAGGCGGCTAGATCTGGGC 60.909 63.158 21.04 21.04 0.00 5.36
406 409 2.656698 TAGGCGGCTAGATCTGGGCA 62.657 60.000 28.16 9.54 36.42 5.36
407 410 2.030262 GCGGCTAGATCTGGGCAG 59.970 66.667 28.16 21.47 36.42 4.85
408 411 2.502492 GCGGCTAGATCTGGGCAGA 61.502 63.158 28.16 0.00 42.37 4.26
409 412 1.664873 CGGCTAGATCTGGGCAGAG 59.335 63.158 28.16 11.68 41.33 3.35
410 413 0.825425 CGGCTAGATCTGGGCAGAGA 60.825 60.000 28.16 0.00 41.33 3.10
411 414 0.968405 GGCTAGATCTGGGCAGAGAG 59.032 60.000 25.09 4.24 41.33 3.20
412 415 0.968405 GCTAGATCTGGGCAGAGAGG 59.032 60.000 5.18 0.00 41.33 3.69
413 416 1.757405 GCTAGATCTGGGCAGAGAGGT 60.757 57.143 5.18 0.00 41.33 3.85
414 417 1.962807 CTAGATCTGGGCAGAGAGGTG 59.037 57.143 5.18 0.00 41.33 4.00
415 418 0.690411 AGATCTGGGCAGAGAGGTGG 60.690 60.000 0.00 0.00 41.33 4.61
416 419 1.692042 ATCTGGGCAGAGAGGTGGG 60.692 63.158 0.00 0.00 41.33 4.61
417 420 2.186873 ATCTGGGCAGAGAGGTGGGA 62.187 60.000 0.00 0.00 41.33 4.37
418 421 2.607750 TGGGCAGAGAGGTGGGAC 60.608 66.667 0.00 0.00 0.00 4.46
419 422 3.775654 GGGCAGAGAGGTGGGACG 61.776 72.222 0.00 0.00 0.00 4.79
420 423 3.775654 GGCAGAGAGGTGGGACGG 61.776 72.222 0.00 0.00 0.00 4.79
421 424 2.680352 GCAGAGAGGTGGGACGGA 60.680 66.667 0.00 0.00 0.00 4.69
422 425 2.716017 GCAGAGAGGTGGGACGGAG 61.716 68.421 0.00 0.00 0.00 4.63
434 437 3.506108 ACGGAGTCGATACGGTGG 58.494 61.111 10.33 0.00 40.71 4.61
435 438 2.025727 CGGAGTCGATACGGTGGC 59.974 66.667 0.00 0.00 39.00 5.01
436 439 2.025727 GGAGTCGATACGGTGGCG 59.974 66.667 0.00 0.00 0.00 5.69
437 440 2.025727 GAGTCGATACGGTGGCGG 59.974 66.667 0.00 0.00 0.00 6.13
438 441 4.203076 AGTCGATACGGTGGCGGC 62.203 66.667 0.00 0.00 0.00 6.53
451 454 4.221422 GCGGCGGGCTGTATGAGA 62.221 66.667 9.78 0.00 39.11 3.27
452 455 2.279517 CGGCGGGCTGTATGAGAC 60.280 66.667 0.00 0.00 0.00 3.36
453 456 2.279517 GGCGGGCTGTATGAGACG 60.280 66.667 0.00 0.00 0.00 4.18
454 457 2.279517 GCGGGCTGTATGAGACGG 60.280 66.667 0.00 0.00 37.51 4.79
459 462 4.402192 CTGTATGAGACGGCGGTG 57.598 61.111 13.24 0.00 0.00 4.94
460 463 1.807226 CTGTATGAGACGGCGGTGA 59.193 57.895 13.24 0.00 0.00 4.02
461 464 0.525668 CTGTATGAGACGGCGGTGAC 60.526 60.000 13.24 0.62 0.00 3.67
462 465 1.245376 TGTATGAGACGGCGGTGACA 61.245 55.000 13.24 6.31 0.00 3.58
463 466 0.108992 GTATGAGACGGCGGTGACAA 60.109 55.000 13.24 0.00 0.00 3.18
464 467 0.821517 TATGAGACGGCGGTGACAAT 59.178 50.000 13.24 0.00 0.00 2.71
465 468 0.036388 ATGAGACGGCGGTGACAATT 60.036 50.000 13.24 0.00 0.00 2.32
466 469 0.948623 TGAGACGGCGGTGACAATTG 60.949 55.000 13.24 3.24 0.00 2.32
467 470 0.669318 GAGACGGCGGTGACAATTGA 60.669 55.000 13.59 0.00 0.00 2.57
468 471 0.036388 AGACGGCGGTGACAATTGAT 60.036 50.000 13.59 0.00 0.00 2.57
469 472 0.096976 GACGGCGGTGACAATTGATG 59.903 55.000 13.59 0.00 0.00 3.07
470 473 1.226379 CGGCGGTGACAATTGATGC 60.226 57.895 13.59 7.88 0.00 3.91
471 474 1.226379 GGCGGTGACAATTGATGCG 60.226 57.895 13.59 0.22 0.00 4.73
472 475 1.226379 GCGGTGACAATTGATGCGG 60.226 57.895 13.59 6.75 0.00 5.69
473 476 1.429021 CGGTGACAATTGATGCGGG 59.571 57.895 13.59 0.00 0.00 6.13
474 477 1.809207 GGTGACAATTGATGCGGGG 59.191 57.895 13.59 0.00 0.00 5.73
475 478 1.666209 GGTGACAATTGATGCGGGGG 61.666 60.000 13.59 0.00 0.00 5.40
476 479 0.679640 GTGACAATTGATGCGGGGGA 60.680 55.000 13.59 0.00 0.00 4.81
477 480 0.038890 TGACAATTGATGCGGGGGAA 59.961 50.000 13.59 0.00 0.00 3.97
478 481 0.455815 GACAATTGATGCGGGGGAAC 59.544 55.000 13.59 0.00 0.00 3.62
479 482 0.251564 ACAATTGATGCGGGGGAACA 60.252 50.000 13.59 0.00 0.00 3.18
480 483 0.457035 CAATTGATGCGGGGGAACAG 59.543 55.000 0.00 0.00 0.00 3.16
481 484 0.684153 AATTGATGCGGGGGAACAGG 60.684 55.000 0.00 0.00 0.00 4.00
482 485 1.570857 ATTGATGCGGGGGAACAGGA 61.571 55.000 0.00 0.00 0.00 3.86
483 486 2.190578 GATGCGGGGGAACAGGAG 59.809 66.667 0.00 0.00 0.00 3.69
484 487 2.285368 ATGCGGGGGAACAGGAGA 60.285 61.111 0.00 0.00 0.00 3.71
485 488 2.317149 GATGCGGGGGAACAGGAGAG 62.317 65.000 0.00 0.00 0.00 3.20
486 489 3.787001 GCGGGGGAACAGGAGAGG 61.787 72.222 0.00 0.00 0.00 3.69
487 490 3.083997 CGGGGGAACAGGAGAGGG 61.084 72.222 0.00 0.00 0.00 4.30
488 491 2.125225 GGGGGAACAGGAGAGGGT 59.875 66.667 0.00 0.00 0.00 4.34
489 492 2.301738 GGGGGAACAGGAGAGGGTG 61.302 68.421 0.00 0.00 0.00 4.61
490 493 2.301738 GGGGAACAGGAGAGGGTGG 61.302 68.421 0.00 0.00 0.00 4.61
491 494 1.539124 GGGAACAGGAGAGGGTGGT 60.539 63.158 0.00 0.00 0.00 4.16
492 495 1.679898 GGAACAGGAGAGGGTGGTG 59.320 63.158 0.00 0.00 0.00 4.17
493 496 0.836400 GGAACAGGAGAGGGTGGTGA 60.836 60.000 0.00 0.00 0.00 4.02
494 497 1.056660 GAACAGGAGAGGGTGGTGAA 58.943 55.000 0.00 0.00 0.00 3.18
495 498 1.002544 GAACAGGAGAGGGTGGTGAAG 59.997 57.143 0.00 0.00 0.00 3.02
496 499 0.838122 ACAGGAGAGGGTGGTGAAGG 60.838 60.000 0.00 0.00 0.00 3.46
497 500 0.545309 CAGGAGAGGGTGGTGAAGGA 60.545 60.000 0.00 0.00 0.00 3.36
498 501 0.252467 AGGAGAGGGTGGTGAAGGAG 60.252 60.000 0.00 0.00 0.00 3.69
499 502 0.252284 GGAGAGGGTGGTGAAGGAGA 60.252 60.000 0.00 0.00 0.00 3.71
500 503 0.899019 GAGAGGGTGGTGAAGGAGAC 59.101 60.000 0.00 0.00 0.00 3.36
501 504 0.191064 AGAGGGTGGTGAAGGAGACA 59.809 55.000 0.00 0.00 0.00 3.41
502 505 0.610687 GAGGGTGGTGAAGGAGACAG 59.389 60.000 0.00 0.00 0.00 3.51
516 519 4.155709 AGGAGACAGACATGAGAACAGAA 58.844 43.478 0.00 0.00 0.00 3.02
531 534 5.053145 AGAACAGAAGCATATTTCCTAGCG 58.947 41.667 0.00 0.00 0.00 4.26
532 535 4.672587 ACAGAAGCATATTTCCTAGCGA 57.327 40.909 0.00 0.00 0.00 4.93
544 547 2.361992 TAGCGAAGAGGGGCACGA 60.362 61.111 0.00 0.00 0.00 4.35
550 553 0.608640 GAAGAGGGGCACGAAGAAGA 59.391 55.000 0.00 0.00 0.00 2.87
578 581 1.790387 CTCGCTTTTGAGGCTTCCG 59.210 57.895 0.00 0.00 32.18 4.30
684 687 3.134127 GCCATCCCACAAGCCGTC 61.134 66.667 0.00 0.00 0.00 4.79
686 689 2.819595 CATCCCACAAGCCGTCCG 60.820 66.667 0.00 0.00 0.00 4.79
693 696 2.812178 CAAGCCGTCCGTAACCCG 60.812 66.667 0.00 0.00 0.00 5.28
1186 10866 2.357327 TGACCTTACGGTTGATGACG 57.643 50.000 0.00 0.00 45.73 4.35
1187 10867 0.997196 GACCTTACGGTTGATGACGC 59.003 55.000 0.00 0.00 45.73 5.19
1436 11116 1.411977 CCCCAACAATGTTCAGCAACA 59.588 47.619 0.00 0.00 46.71 3.33
1443 11123 6.441274 CAACAATGTTCAGCAACAGTCTATT 58.559 36.000 0.00 0.00 45.85 1.73
1488 11168 1.464997 GGGACGAGCAATTTCACTGAC 59.535 52.381 0.00 0.00 0.00 3.51
1774 11457 6.998968 ATTTGAGGCTGAAAGATTCTAGTG 57.001 37.500 5.21 0.00 34.07 2.74
1777 11460 4.287067 TGAGGCTGAAAGATTCTAGTGGTT 59.713 41.667 0.00 0.00 34.07 3.67
2041 11724 6.713450 TCGACTAAGCAAATTCTTTTTAGGGT 59.287 34.615 0.00 0.00 0.00 4.34
2042 11725 6.801862 CGACTAAGCAAATTCTTTTTAGGGTG 59.198 38.462 0.00 0.00 0.00 4.61
2064 11747 0.816825 CGCCACCGCTAGAGTACCTA 60.817 60.000 0.00 0.00 0.00 3.08
2206 11892 2.354821 GTGGATTGAACTAACCGCCATC 59.645 50.000 0.00 0.00 0.00 3.51
2253 11939 4.679197 GAAACTATTCATTGCAAACGTGCA 59.321 37.500 1.71 0.00 45.84 4.57
2329 12015 1.662629 GAGTCGCTCCATGTTCATGTG 59.337 52.381 11.13 5.65 0.00 3.21
2342 12028 3.000041 GTTCATGTGCGTTCATCCTACA 59.000 45.455 0.00 0.00 0.00 2.74
2365 16005 2.151881 TTGTCAAGCGCGGTACTTTA 57.848 45.000 12.91 0.00 0.00 1.85
2371 16011 4.319901 GTCAAGCGCGGTACTTTATTTTTG 59.680 41.667 12.91 1.52 0.00 2.44
2372 16012 3.481112 AGCGCGGTACTTTATTTTTGG 57.519 42.857 10.12 0.00 0.00 3.28
2373 16013 2.815503 AGCGCGGTACTTTATTTTTGGT 59.184 40.909 10.12 0.00 0.00 3.67
2374 16014 3.253921 AGCGCGGTACTTTATTTTTGGTT 59.746 39.130 10.12 0.00 0.00 3.67
2375 16015 3.362534 GCGCGGTACTTTATTTTTGGTTG 59.637 43.478 8.83 0.00 0.00 3.77
2376 16016 3.915569 CGCGGTACTTTATTTTTGGTTGG 59.084 43.478 0.00 0.00 0.00 3.77
2422 16064 6.010294 AGAATTCTGAATGCAGTTTGACAG 57.990 37.500 7.30 0.00 42.84 3.51
2426 16068 3.004002 TCTGAATGCAGTTTGACAGCAAG 59.996 43.478 0.00 0.00 43.71 4.01
2438 16080 0.761187 ACAGCAAGTCAGAGAAGGCA 59.239 50.000 0.00 0.00 0.00 4.75
2453 16098 2.177950 GGCAACTGCTGGATCACTG 58.822 57.895 1.06 0.00 41.70 3.66
2454 16099 0.321919 GGCAACTGCTGGATCACTGA 60.322 55.000 1.06 0.00 41.70 3.41
2468 16113 2.497138 TCACTGAATGTGCAAGTGGAG 58.503 47.619 13.98 0.00 45.81 3.86
2656 16301 4.286320 GGAGATCGTCCGCCGCAT 62.286 66.667 0.00 0.00 34.84 4.73
2707 16352 1.004277 GTGCTCGACGAACTGACAGG 61.004 60.000 7.51 0.00 0.00 4.00
2839 16488 5.183713 TGGCCTAATGATTATGTTATGCTGC 59.816 40.000 3.32 0.00 0.00 5.25
2862 16513 6.818644 TGCCTCTAAAGATAGAACAACATGTC 59.181 38.462 0.00 0.00 37.70 3.06
2912 16566 2.821546 TGCTCGATTATCCAAAGGACG 58.178 47.619 0.00 0.00 32.98 4.79
2913 16567 2.135933 GCTCGATTATCCAAAGGACGG 58.864 52.381 0.00 0.00 32.98 4.79
2914 16568 2.223971 GCTCGATTATCCAAAGGACGGA 60.224 50.000 0.00 0.00 32.98 4.69
2915 16569 3.381949 CTCGATTATCCAAAGGACGGAC 58.618 50.000 0.00 0.00 34.69 4.79
2916 16570 2.124903 CGATTATCCAAAGGACGGACG 58.875 52.381 0.00 0.00 34.69 4.79
2917 16571 2.480845 GATTATCCAAAGGACGGACGG 58.519 52.381 0.00 0.00 34.69 4.79
2918 16572 1.559368 TTATCCAAAGGACGGACGGA 58.441 50.000 0.00 0.00 34.69 4.69
2919 16573 0.819582 TATCCAAAGGACGGACGGAC 59.180 55.000 0.00 0.00 34.69 4.79
2930 16584 2.887568 GACGGACGGATGCAGCTG 60.888 66.667 9.77 9.77 0.00 4.24
3001 16659 1.541379 AAATTACCACTTGGACGCCC 58.459 50.000 1.14 0.00 38.94 6.13
3064 16734 4.645863 ATGCAGCATCCCTGATATTGTA 57.354 40.909 0.52 0.00 44.64 2.41
3087 16757 3.240302 ACTACTGCTACTTGTTGGACCT 58.760 45.455 0.00 0.00 0.00 3.85
3101 16771 1.748493 TGGACCTGAACAACAACTTGC 59.252 47.619 0.00 0.00 0.00 4.01
3135 16825 5.590530 TCACAACAAGCACTGGTTTAAAT 57.409 34.783 0.00 0.00 0.00 1.40
3165 16857 3.003585 GCTGGCCAAATTTTCAAAACCAG 59.996 43.478 7.01 10.73 44.99 4.00
3196 16893 4.693566 ACAAACATGGTAAGTACACGGATG 59.306 41.667 0.00 0.00 0.00 3.51
3198 16895 4.811969 ACATGGTAAGTACACGGATGAA 57.188 40.909 0.00 0.00 0.00 2.57
3224 16921 8.092687 AGTTTCAACACCGTCTATATGTTTACT 58.907 33.333 0.00 0.00 34.36 2.24
3225 16922 8.378421 GTTTCAACACCGTCTATATGTTTACTC 58.622 37.037 0.00 0.00 34.36 2.59
3273 16970 0.175531 GGGCATCGACCCCATTTTTG 59.824 55.000 16.19 0.00 45.00 2.44
3281 16978 2.226330 GACCCCATTTTTGTTTTGGCC 58.774 47.619 0.00 0.00 0.00 5.36
3284 16981 3.295093 CCCCATTTTTGTTTTGGCCTTT 58.705 40.909 3.32 0.00 0.00 3.11
3330 17032 6.762661 AGTCCAAATTGAGTTTTGTTTCCATG 59.237 34.615 0.00 0.00 35.30 3.66
3331 17033 5.526846 TCCAAATTGAGTTTTGTTTCCATGC 59.473 36.000 0.00 0.00 35.30 4.06
3346 17049 2.037121 TCCATGCTCGTCTTTCTTGTGA 59.963 45.455 0.00 0.00 0.00 3.58
3357 17060 2.169832 TTCTTGTGAGAGGGCTTTCG 57.830 50.000 0.00 0.00 32.44 3.46
3366 17069 3.706594 TGAGAGGGCTTTCGAATATGACT 59.293 43.478 0.00 0.00 0.00 3.41
3389 17092 6.961359 TCATTTTGAGTACATTTCGACGAT 57.039 33.333 0.00 0.00 0.00 3.73
3391 17094 8.468720 TCATTTTGAGTACATTTCGACGATTA 57.531 30.769 0.00 0.00 0.00 1.75
3407 17121 8.206516 TCGACGATTATTTTAAAACTTTGTGC 57.793 30.769 1.97 0.00 0.00 4.57
3447 17161 5.591099 ACTTGATGCAAAGAACGACAAAAT 58.409 33.333 5.15 0.00 0.00 1.82
3451 17165 3.701241 TGCAAAGAACGACAAAATGTCC 58.299 40.909 5.00 0.00 44.20 4.02
3480 17194 4.477302 AAGACACCGGTTCAAATTTACG 57.523 40.909 2.97 0.00 0.00 3.18
3481 17195 2.224784 AGACACCGGTTCAAATTTACGC 59.775 45.455 2.97 0.00 0.00 4.42
3501 17215 4.691685 ACGCGAATAAATGTTTCCACACTA 59.308 37.500 15.93 0.00 35.03 2.74
3503 17217 5.019498 GCGAATAAATGTTTCCACACTACG 58.981 41.667 0.00 0.00 35.03 3.51
3504 17218 5.163933 GCGAATAAATGTTTCCACACTACGA 60.164 40.000 0.00 0.00 35.03 3.43
3505 17219 6.619018 GCGAATAAATGTTTCCACACTACGAA 60.619 38.462 0.00 0.00 35.03 3.85
3506 17220 6.735063 CGAATAAATGTTTCCACACTACGAAC 59.265 38.462 0.00 0.00 35.03 3.95
3507 17221 7.499321 AATAAATGTTTCCACACTACGAACA 57.501 32.000 0.00 0.00 35.03 3.18
3508 17222 7.681939 ATAAATGTTTCCACACTACGAACAT 57.318 32.000 0.00 0.00 41.28 2.71
3509 17223 5.356882 AATGTTTCCACACTACGAACATG 57.643 39.130 0.00 0.00 39.92 3.21
3510 17224 3.799366 TGTTTCCACACTACGAACATGT 58.201 40.909 0.00 0.00 0.00 3.21
3511 17225 4.193090 TGTTTCCACACTACGAACATGTT 58.807 39.130 11.78 11.78 0.00 2.71
3513 17227 5.124138 TGTTTCCACACTACGAACATGTTTT 59.876 36.000 13.36 5.73 0.00 2.43
3514 17228 5.821516 TTCCACACTACGAACATGTTTTT 57.178 34.783 13.36 5.36 0.00 1.94
3560 17274 8.880991 CTAGTATAGGGCTTCCTCTGTAAATA 57.119 38.462 0.00 0.00 41.96 1.40
3561 17275 9.310449 CTAGTATAGGGCTTCCTCTGTAAATAA 57.690 37.037 0.00 0.00 41.96 1.40
3562 17276 8.562949 AGTATAGGGCTTCCTCTGTAAATAAA 57.437 34.615 0.00 0.00 41.96 1.40
3563 17277 8.430431 AGTATAGGGCTTCCTCTGTAAATAAAC 58.570 37.037 0.00 0.00 41.96 2.01
3565 17279 6.079712 AGGGCTTCCTCTGTAAATAAACAT 57.920 37.500 0.00 0.00 35.60 2.71
3566 17280 7.208064 AGGGCTTCCTCTGTAAATAAACATA 57.792 36.000 0.00 0.00 35.60 2.29
3567 17281 7.639378 AGGGCTTCCTCTGTAAATAAACATAA 58.361 34.615 0.00 0.00 35.60 1.90
3568 17282 7.775561 AGGGCTTCCTCTGTAAATAAACATAAG 59.224 37.037 0.00 0.00 35.60 1.73
3569 17283 7.773690 GGGCTTCCTCTGTAAATAAACATAAGA 59.226 37.037 0.00 0.00 0.00 2.10
3570 17284 8.831550 GGCTTCCTCTGTAAATAAACATAAGAG 58.168 37.037 0.00 0.00 0.00 2.85
3571 17285 8.338986 GCTTCCTCTGTAAATAAACATAAGAGC 58.661 37.037 0.00 0.00 0.00 4.09
3572 17286 8.420374 TTCCTCTGTAAATAAACATAAGAGCG 57.580 34.615 0.00 0.00 0.00 5.03
3573 17287 7.553334 TCCTCTGTAAATAAACATAAGAGCGT 58.447 34.615 0.00 0.00 0.00 5.07
3574 17288 8.038944 TCCTCTGTAAATAAACATAAGAGCGTT 58.961 33.333 0.00 0.00 0.00 4.84
3575 17289 8.665685 CCTCTGTAAATAAACATAAGAGCGTTT 58.334 33.333 0.00 0.00 38.76 3.60
3578 17292 9.820229 CTGTAAATAAACATAAGAGCGTTTTCA 57.180 29.630 0.00 0.00 36.72 2.69
3588 17302 9.988350 ACATAAGAGCGTTTTCATAAAATAGTG 57.012 29.630 0.00 0.00 32.22 2.74
3592 17306 8.723942 AGAGCGTTTTCATAAAATAGTGATCT 57.276 30.769 0.00 0.00 32.22 2.75
3593 17307 9.817809 AGAGCGTTTTCATAAAATAGTGATCTA 57.182 29.630 0.00 0.00 32.22 1.98
3625 17339 4.525912 TGTTTCTTTACGGAGGGAGTAC 57.474 45.455 0.00 0.00 0.00 2.73
3626 17340 3.896888 TGTTTCTTTACGGAGGGAGTACA 59.103 43.478 0.00 0.00 0.00 2.90
3627 17341 4.529377 TGTTTCTTTACGGAGGGAGTACAT 59.471 41.667 0.00 0.00 0.00 2.29
3628 17342 4.730949 TTCTTTACGGAGGGAGTACATG 57.269 45.455 0.00 0.00 0.00 3.21
3629 17343 3.705051 TCTTTACGGAGGGAGTACATGT 58.295 45.455 2.69 2.69 0.00 3.21
3630 17344 4.091549 TCTTTACGGAGGGAGTACATGTT 58.908 43.478 2.30 0.00 0.00 2.71
3631 17345 5.263599 TCTTTACGGAGGGAGTACATGTTA 58.736 41.667 2.30 0.00 0.00 2.41
3666 17380 6.591062 CCATTCAAATTCACACGGAAATTCAT 59.409 34.615 0.00 0.00 39.39 2.57
3674 17388 2.009774 CACGGAAATTCATCGCTTCCT 58.990 47.619 0.00 0.00 37.13 3.36
3675 17389 3.194861 CACGGAAATTCATCGCTTCCTA 58.805 45.455 0.00 0.00 37.13 2.94
3676 17390 3.001330 CACGGAAATTCATCGCTTCCTAC 59.999 47.826 0.00 0.00 37.13 3.18
3677 17391 2.218759 CGGAAATTCATCGCTTCCTACG 59.781 50.000 0.00 0.00 37.13 3.51
3678 17392 3.195661 GGAAATTCATCGCTTCCTACGT 58.804 45.455 0.00 0.00 36.48 3.57
3679 17393 3.001330 GGAAATTCATCGCTTCCTACGTG 59.999 47.826 0.00 0.00 36.48 4.49
3680 17394 1.571919 ATTCATCGCTTCCTACGTGC 58.428 50.000 0.00 0.00 0.00 5.34
3681 17395 0.459585 TTCATCGCTTCCTACGTGCC 60.460 55.000 0.00 0.00 0.00 5.01
3682 17396 1.883084 CATCGCTTCCTACGTGCCC 60.883 63.158 0.00 0.00 0.00 5.36
3683 17397 3.426117 ATCGCTTCCTACGTGCCCG 62.426 63.158 0.00 0.00 40.83 6.13
3693 17407 2.867472 CGTGCCCGTGACATTTCC 59.133 61.111 0.00 0.00 0.00 3.13
3694 17408 1.963855 CGTGCCCGTGACATTTCCA 60.964 57.895 0.00 0.00 0.00 3.53
3695 17409 1.875963 GTGCCCGTGACATTTCCAG 59.124 57.895 0.00 0.00 0.00 3.86
3696 17410 0.605319 GTGCCCGTGACATTTCCAGA 60.605 55.000 0.00 0.00 0.00 3.86
3697 17411 0.109532 TGCCCGTGACATTTCCAGAA 59.890 50.000 0.00 0.00 0.00 3.02
3698 17412 1.243902 GCCCGTGACATTTCCAGAAA 58.756 50.000 0.00 0.00 34.46 2.52
3699 17413 1.200020 GCCCGTGACATTTCCAGAAAG 59.800 52.381 0.00 0.00 33.32 2.62
3700 17414 1.200020 CCCGTGACATTTCCAGAAAGC 59.800 52.381 0.00 0.00 33.32 3.51
3701 17415 1.200020 CCGTGACATTTCCAGAAAGCC 59.800 52.381 0.00 0.00 33.32 4.35
3702 17416 1.200020 CGTGACATTTCCAGAAAGCCC 59.800 52.381 0.00 0.00 33.32 5.19
3703 17417 2.519013 GTGACATTTCCAGAAAGCCCT 58.481 47.619 0.00 0.00 33.32 5.19
3704 17418 2.893489 GTGACATTTCCAGAAAGCCCTT 59.107 45.455 0.00 0.00 33.32 3.95
3705 17419 2.892852 TGACATTTCCAGAAAGCCCTTG 59.107 45.455 0.00 0.00 33.32 3.61
3706 17420 3.157087 GACATTTCCAGAAAGCCCTTGA 58.843 45.455 0.00 0.00 33.32 3.02
3707 17421 3.573967 GACATTTCCAGAAAGCCCTTGAA 59.426 43.478 0.00 0.00 33.32 2.69
3708 17422 3.966665 ACATTTCCAGAAAGCCCTTGAAA 59.033 39.130 0.00 0.00 33.97 2.69
3709 17423 4.408596 ACATTTCCAGAAAGCCCTTGAAAA 59.591 37.500 0.00 0.00 33.43 2.29
3710 17424 5.072193 ACATTTCCAGAAAGCCCTTGAAAAT 59.928 36.000 0.00 0.00 33.43 1.82
3711 17425 4.871933 TTCCAGAAAGCCCTTGAAAATC 57.128 40.909 0.00 0.00 0.00 2.17
3712 17426 3.165071 TCCAGAAAGCCCTTGAAAATCC 58.835 45.455 0.00 0.00 0.00 3.01
3713 17427 2.094545 CCAGAAAGCCCTTGAAAATCCG 60.095 50.000 0.00 0.00 0.00 4.18
3714 17428 1.546029 AGAAAGCCCTTGAAAATCCGC 59.454 47.619 0.00 0.00 0.00 5.54
3715 17429 0.608130 AAAGCCCTTGAAAATCCGCC 59.392 50.000 0.00 0.00 0.00 6.13
3716 17430 1.257750 AAGCCCTTGAAAATCCGCCC 61.258 55.000 0.00 0.00 0.00 6.13
3717 17431 1.981853 GCCCTTGAAAATCCGCCCA 60.982 57.895 0.00 0.00 0.00 5.36
3718 17432 1.890174 CCCTTGAAAATCCGCCCAC 59.110 57.895 0.00 0.00 0.00 4.61
3719 17433 1.506262 CCTTGAAAATCCGCCCACG 59.494 57.895 0.00 0.00 39.67 4.94
3720 17434 1.154035 CTTGAAAATCCGCCCACGC 60.154 57.895 0.00 0.00 38.22 5.34
3721 17435 1.861542 CTTGAAAATCCGCCCACGCA 61.862 55.000 0.00 0.00 38.22 5.24
3722 17436 1.456196 TTGAAAATCCGCCCACGCAA 61.456 50.000 0.00 0.00 38.22 4.85
3723 17437 1.287503 GAAAATCCGCCCACGCAAA 59.712 52.632 0.00 0.00 38.22 3.68
3724 17438 0.108851 GAAAATCCGCCCACGCAAAT 60.109 50.000 0.00 0.00 38.22 2.32
3725 17439 0.108851 AAAATCCGCCCACGCAAATC 60.109 50.000 0.00 0.00 38.22 2.17
3726 17440 1.944234 AAATCCGCCCACGCAAATCC 61.944 55.000 0.00 0.00 38.22 3.01
3729 17443 4.160635 CGCCCACGCAAATCCGTC 62.161 66.667 0.00 0.00 39.83 4.79
3730 17444 2.746277 GCCCACGCAAATCCGTCT 60.746 61.111 0.00 0.00 39.83 4.18
3731 17445 2.750888 GCCCACGCAAATCCGTCTC 61.751 63.158 0.00 0.00 39.83 3.36
3732 17446 2.106683 CCCACGCAAATCCGTCTCC 61.107 63.158 0.00 0.00 39.83 3.71
3733 17447 2.106683 CCACGCAAATCCGTCTCCC 61.107 63.158 0.00 0.00 39.83 4.30
3734 17448 2.106683 CACGCAAATCCGTCTCCCC 61.107 63.158 0.00 0.00 39.83 4.81
3735 17449 2.513897 CGCAAATCCGTCTCCCCC 60.514 66.667 0.00 0.00 0.00 5.40
3736 17450 2.998949 GCAAATCCGTCTCCCCCT 59.001 61.111 0.00 0.00 0.00 4.79
3737 17451 1.153147 GCAAATCCGTCTCCCCCTC 60.153 63.158 0.00 0.00 0.00 4.30
3738 17452 1.527370 CAAATCCGTCTCCCCCTCC 59.473 63.158 0.00 0.00 0.00 4.30
3739 17453 1.693103 AAATCCGTCTCCCCCTCCC 60.693 63.158 0.00 0.00 0.00 4.30
3740 17454 3.715848 AATCCGTCTCCCCCTCCCC 62.716 68.421 0.00 0.00 0.00 4.81
3743 17457 4.133373 CGTCTCCCCCTCCCCGTA 62.133 72.222 0.00 0.00 0.00 4.02
3744 17458 2.365764 GTCTCCCCCTCCCCGTAA 59.634 66.667 0.00 0.00 0.00 3.18
3745 17459 1.306397 GTCTCCCCCTCCCCGTAAA 60.306 63.158 0.00 0.00 0.00 2.01
3746 17460 0.693430 GTCTCCCCCTCCCCGTAAAT 60.693 60.000 0.00 0.00 0.00 1.40
3747 17461 0.045162 TCTCCCCCTCCCCGTAAATT 59.955 55.000 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.879223 AGGTTTCAGAGATTGCTTATGTCAG 59.121 40.000 0.00 0.00 0.00 3.51
35 36 5.645067 CAGGTTTCAGAGATTGCTTATGTCA 59.355 40.000 0.00 0.00 0.00 3.58
56 57 6.422502 ATGGTCACATAGTCACCGAACAGG 62.423 50.000 0.00 0.00 40.11 4.00
68 69 5.882557 ACTGCTTTAAAGGATGGTCACATAG 59.117 40.000 16.78 1.13 37.47 2.23
77 78 8.506168 TCCATAGTTTACTGCTTTAAAGGATG 57.494 34.615 16.78 10.19 0.00 3.51
85 86 6.414732 TGTAGCATCCATAGTTTACTGCTTT 58.585 36.000 0.00 0.00 40.25 3.51
86 87 5.989477 TGTAGCATCCATAGTTTACTGCTT 58.011 37.500 0.00 0.00 40.25 3.91
87 88 5.614324 TGTAGCATCCATAGTTTACTGCT 57.386 39.130 0.00 0.00 42.23 4.24
88 89 6.483307 TGATTGTAGCATCCATAGTTTACTGC 59.517 38.462 0.00 0.00 0.00 4.40
89 90 8.437360 TTGATTGTAGCATCCATAGTTTACTG 57.563 34.615 0.00 0.00 0.00 2.74
90 91 8.893727 GTTTGATTGTAGCATCCATAGTTTACT 58.106 33.333 0.00 0.00 0.00 2.24
91 92 8.673711 TGTTTGATTGTAGCATCCATAGTTTAC 58.326 33.333 0.00 0.00 0.00 2.01
92 93 8.800370 TGTTTGATTGTAGCATCCATAGTTTA 57.200 30.769 0.00 0.00 0.00 2.01
93 94 7.701539 TGTTTGATTGTAGCATCCATAGTTT 57.298 32.000 0.00 0.00 0.00 2.66
94 95 7.682741 GCATGTTTGATTGTAGCATCCATAGTT 60.683 37.037 0.00 0.00 0.00 2.24
95 96 6.238842 GCATGTTTGATTGTAGCATCCATAGT 60.239 38.462 0.00 0.00 0.00 2.12
96 97 6.147581 GCATGTTTGATTGTAGCATCCATAG 58.852 40.000 0.00 0.00 0.00 2.23
97 98 5.593502 TGCATGTTTGATTGTAGCATCCATA 59.406 36.000 0.00 0.00 0.00 2.74
98 99 4.403113 TGCATGTTTGATTGTAGCATCCAT 59.597 37.500 0.00 0.00 0.00 3.41
99 100 3.762823 TGCATGTTTGATTGTAGCATCCA 59.237 39.130 0.00 0.00 0.00 3.41
100 101 4.374843 TGCATGTTTGATTGTAGCATCC 57.625 40.909 0.00 0.00 0.00 3.51
101 102 6.587226 TCTTTTGCATGTTTGATTGTAGCATC 59.413 34.615 0.00 0.00 0.00 3.91
102 103 6.366877 GTCTTTTGCATGTTTGATTGTAGCAT 59.633 34.615 0.00 0.00 0.00 3.79
103 104 5.691305 GTCTTTTGCATGTTTGATTGTAGCA 59.309 36.000 0.00 0.00 0.00 3.49
104 105 5.691305 TGTCTTTTGCATGTTTGATTGTAGC 59.309 36.000 0.00 0.00 0.00 3.58
105 106 6.129378 CGTGTCTTTTGCATGTTTGATTGTAG 60.129 38.462 0.00 0.00 0.00 2.74
106 107 5.685068 CGTGTCTTTTGCATGTTTGATTGTA 59.315 36.000 0.00 0.00 0.00 2.41
107 108 4.503734 CGTGTCTTTTGCATGTTTGATTGT 59.496 37.500 0.00 0.00 0.00 2.71
108 109 4.084952 CCGTGTCTTTTGCATGTTTGATTG 60.085 41.667 0.00 0.00 0.00 2.67
109 110 4.050553 CCGTGTCTTTTGCATGTTTGATT 58.949 39.130 0.00 0.00 0.00 2.57
110 111 3.068024 ACCGTGTCTTTTGCATGTTTGAT 59.932 39.130 0.00 0.00 0.00 2.57
111 112 2.425312 ACCGTGTCTTTTGCATGTTTGA 59.575 40.909 0.00 0.00 0.00 2.69
112 113 2.808244 ACCGTGTCTTTTGCATGTTTG 58.192 42.857 0.00 0.00 0.00 2.93
113 114 3.518634 AACCGTGTCTTTTGCATGTTT 57.481 38.095 0.00 0.00 0.00 2.83
114 115 3.119316 TCAAACCGTGTCTTTTGCATGTT 60.119 39.130 0.00 0.00 33.50 2.71
115 116 2.425312 TCAAACCGTGTCTTTTGCATGT 59.575 40.909 0.00 0.00 33.50 3.21
116 117 3.077229 TCAAACCGTGTCTTTTGCATG 57.923 42.857 0.00 0.00 33.50 4.06
117 118 4.050553 CAATCAAACCGTGTCTTTTGCAT 58.949 39.130 0.00 0.00 33.50 3.96
118 119 3.443037 CAATCAAACCGTGTCTTTTGCA 58.557 40.909 0.00 0.00 33.50 4.08
119 120 2.794350 CCAATCAAACCGTGTCTTTTGC 59.206 45.455 0.00 0.00 33.50 3.68
120 121 3.181480 ACCCAATCAAACCGTGTCTTTTG 60.181 43.478 0.00 0.00 34.57 2.44
121 122 3.028130 ACCCAATCAAACCGTGTCTTTT 58.972 40.909 0.00 0.00 0.00 2.27
122 123 2.661718 ACCCAATCAAACCGTGTCTTT 58.338 42.857 0.00 0.00 0.00 2.52
123 124 2.358322 ACCCAATCAAACCGTGTCTT 57.642 45.000 0.00 0.00 0.00 3.01
124 125 2.635915 TCTACCCAATCAAACCGTGTCT 59.364 45.455 0.00 0.00 0.00 3.41
125 126 3.048337 TCTACCCAATCAAACCGTGTC 57.952 47.619 0.00 0.00 0.00 3.67
126 127 3.071892 TCTTCTACCCAATCAAACCGTGT 59.928 43.478 0.00 0.00 0.00 4.49
127 128 3.670625 TCTTCTACCCAATCAAACCGTG 58.329 45.455 0.00 0.00 0.00 4.94
128 129 4.360951 TTCTTCTACCCAATCAAACCGT 57.639 40.909 0.00 0.00 0.00 4.83
129 130 4.379499 GCTTTCTTCTACCCAATCAAACCG 60.379 45.833 0.00 0.00 0.00 4.44
130 131 4.522789 TGCTTTCTTCTACCCAATCAAACC 59.477 41.667 0.00 0.00 0.00 3.27
131 132 5.241728 ACTGCTTTCTTCTACCCAATCAAAC 59.758 40.000 0.00 0.00 0.00 2.93
132 133 5.385198 ACTGCTTTCTTCTACCCAATCAAA 58.615 37.500 0.00 0.00 0.00 2.69
133 134 4.985538 ACTGCTTTCTTCTACCCAATCAA 58.014 39.130 0.00 0.00 0.00 2.57
134 135 4.640771 ACTGCTTTCTTCTACCCAATCA 57.359 40.909 0.00 0.00 0.00 2.57
135 136 6.655425 AGTTTACTGCTTTCTTCTACCCAATC 59.345 38.462 0.00 0.00 0.00 2.67
136 137 6.543735 AGTTTACTGCTTTCTTCTACCCAAT 58.456 36.000 0.00 0.00 0.00 3.16
137 138 5.937111 AGTTTACTGCTTTCTTCTACCCAA 58.063 37.500 0.00 0.00 0.00 4.12
138 139 5.562298 AGTTTACTGCTTTCTTCTACCCA 57.438 39.130 0.00 0.00 0.00 4.51
139 140 7.065923 CCAATAGTTTACTGCTTTCTTCTACCC 59.934 40.741 0.00 0.00 0.00 3.69
140 141 7.606839 ACCAATAGTTTACTGCTTTCTTCTACC 59.393 37.037 0.00 0.00 0.00 3.18
141 142 8.443937 CACCAATAGTTTACTGCTTTCTTCTAC 58.556 37.037 0.00 0.00 0.00 2.59
142 143 7.119262 GCACCAATAGTTTACTGCTTTCTTCTA 59.881 37.037 0.00 0.00 0.00 2.10
143 144 6.072452 GCACCAATAGTTTACTGCTTTCTTCT 60.072 38.462 0.00 0.00 0.00 2.85
144 145 6.072452 AGCACCAATAGTTTACTGCTTTCTTC 60.072 38.462 0.00 0.00 0.00 2.87
145 146 5.770162 AGCACCAATAGTTTACTGCTTTCTT 59.230 36.000 0.00 0.00 0.00 2.52
146 147 5.316987 AGCACCAATAGTTTACTGCTTTCT 58.683 37.500 0.00 0.00 0.00 2.52
147 148 5.629079 AGCACCAATAGTTTACTGCTTTC 57.371 39.130 0.00 0.00 0.00 2.62
148 149 6.001460 TGTAGCACCAATAGTTTACTGCTTT 58.999 36.000 0.00 0.00 33.22 3.51
149 150 5.556915 TGTAGCACCAATAGTTTACTGCTT 58.443 37.500 0.00 0.00 33.22 3.91
150 151 5.160607 TGTAGCACCAATAGTTTACTGCT 57.839 39.130 0.00 0.00 35.45 4.24
151 152 5.873179 TTGTAGCACCAATAGTTTACTGC 57.127 39.130 0.00 0.00 0.00 4.40
152 153 7.609760 TGATTGTAGCACCAATAGTTTACTG 57.390 36.000 1.35 0.00 35.24 2.74
153 154 8.807948 ATTGATTGTAGCACCAATAGTTTACT 57.192 30.769 1.35 0.00 35.24 2.24
154 155 8.673711 TGATTGATTGTAGCACCAATAGTTTAC 58.326 33.333 1.35 0.00 35.24 2.01
155 156 8.800370 TGATTGATTGTAGCACCAATAGTTTA 57.200 30.769 1.35 0.00 35.24 2.01
156 157 7.701539 TGATTGATTGTAGCACCAATAGTTT 57.298 32.000 1.35 0.00 35.24 2.66
157 158 7.886629 ATGATTGATTGTAGCACCAATAGTT 57.113 32.000 1.35 0.00 35.24 2.24
158 159 7.886629 AATGATTGATTGTAGCACCAATAGT 57.113 32.000 1.35 0.00 35.24 2.12
159 160 7.588854 CGAAATGATTGATTGTAGCACCAATAG 59.411 37.037 1.35 0.00 35.24 1.73
160 161 7.416817 CGAAATGATTGATTGTAGCACCAATA 58.583 34.615 1.35 0.00 35.24 1.90
161 162 6.267817 CGAAATGATTGATTGTAGCACCAAT 58.732 36.000 0.96 0.96 37.74 3.16
162 163 5.392919 CCGAAATGATTGATTGTAGCACCAA 60.393 40.000 0.00 0.00 0.00 3.67
163 164 4.096231 CCGAAATGATTGATTGTAGCACCA 59.904 41.667 0.00 0.00 0.00 4.17
164 165 4.601019 CCGAAATGATTGATTGTAGCACC 58.399 43.478 0.00 0.00 0.00 5.01
165 166 4.037690 GCCGAAATGATTGATTGTAGCAC 58.962 43.478 0.00 0.00 0.00 4.40
166 167 3.693578 TGCCGAAATGATTGATTGTAGCA 59.306 39.130 0.00 0.00 0.00 3.49
167 168 4.201950 ACTGCCGAAATGATTGATTGTAGC 60.202 41.667 0.00 0.00 0.00 3.58
168 169 5.268544 CACTGCCGAAATGATTGATTGTAG 58.731 41.667 0.00 0.00 0.00 2.74
169 170 4.438608 GCACTGCCGAAATGATTGATTGTA 60.439 41.667 0.00 0.00 0.00 2.41
170 171 3.674138 GCACTGCCGAAATGATTGATTGT 60.674 43.478 0.00 0.00 0.00 2.71
171 172 2.855963 GCACTGCCGAAATGATTGATTG 59.144 45.455 0.00 0.00 0.00 2.67
172 173 2.492881 TGCACTGCCGAAATGATTGATT 59.507 40.909 0.00 0.00 0.00 2.57
173 174 2.093890 TGCACTGCCGAAATGATTGAT 58.906 42.857 0.00 0.00 0.00 2.57
174 175 1.532523 TGCACTGCCGAAATGATTGA 58.467 45.000 0.00 0.00 0.00 2.57
175 176 2.350899 TTGCACTGCCGAAATGATTG 57.649 45.000 0.00 0.00 0.00 2.67
211 212 7.790861 ATTTCCGAAATTTACTTTGCGTTAG 57.209 32.000 0.17 0.00 0.00 2.34
279 280 8.577296 GCTTCTCAATTCCCCCTTTATAATTAC 58.423 37.037 0.00 0.00 0.00 1.89
295 297 5.922544 CCTTTTCACATTTCGCTTCTCAATT 59.077 36.000 0.00 0.00 0.00 2.32
297 299 4.578516 TCCTTTTCACATTTCGCTTCTCAA 59.421 37.500 0.00 0.00 0.00 3.02
328 331 0.899717 GCCAAGACCCAATCCAAGCA 60.900 55.000 0.00 0.00 0.00 3.91
343 346 4.323477 CCCGAGACCCAACGCCAA 62.323 66.667 0.00 0.00 0.00 4.52
384 387 0.540830 CCAGATCTAGCCGCCTACCT 60.541 60.000 0.00 0.00 0.00 3.08
385 388 1.536943 CCCAGATCTAGCCGCCTACC 61.537 65.000 0.00 0.00 0.00 3.18
386 389 1.968310 CCCAGATCTAGCCGCCTAC 59.032 63.158 0.00 0.00 0.00 3.18
387 390 1.908793 GCCCAGATCTAGCCGCCTA 60.909 63.158 0.00 0.00 0.00 3.93
388 391 3.237741 GCCCAGATCTAGCCGCCT 61.238 66.667 0.00 0.00 0.00 5.52
389 392 3.527775 CTGCCCAGATCTAGCCGCC 62.528 68.421 12.95 0.00 0.00 6.13
390 393 2.030262 CTGCCCAGATCTAGCCGC 59.970 66.667 12.95 5.30 0.00 6.53
391 394 0.825425 TCTCTGCCCAGATCTAGCCG 60.825 60.000 12.95 7.91 36.76 5.52
392 395 0.968405 CTCTCTGCCCAGATCTAGCC 59.032 60.000 12.95 0.00 36.76 3.93
393 396 0.968405 CCTCTCTGCCCAGATCTAGC 59.032 60.000 9.47 9.47 36.76 3.42
394 397 1.962807 CACCTCTCTGCCCAGATCTAG 59.037 57.143 0.00 0.00 36.76 2.43
395 398 1.412217 CCACCTCTCTGCCCAGATCTA 60.412 57.143 0.00 0.00 36.76 1.98
396 399 0.690411 CCACCTCTCTGCCCAGATCT 60.690 60.000 0.00 0.00 36.76 2.75
397 400 1.694133 CCCACCTCTCTGCCCAGATC 61.694 65.000 0.00 0.00 36.76 2.75
398 401 1.692042 CCCACCTCTCTGCCCAGAT 60.692 63.158 0.00 0.00 36.76 2.90
399 402 2.284921 CCCACCTCTCTGCCCAGA 60.285 66.667 0.00 0.00 35.85 3.86
400 403 2.284921 TCCCACCTCTCTGCCCAG 60.285 66.667 0.00 0.00 0.00 4.45
401 404 2.607750 GTCCCACCTCTCTGCCCA 60.608 66.667 0.00 0.00 0.00 5.36
402 405 3.775654 CGTCCCACCTCTCTGCCC 61.776 72.222 0.00 0.00 0.00 5.36
403 406 3.775654 CCGTCCCACCTCTCTGCC 61.776 72.222 0.00 0.00 0.00 4.85
404 407 2.680352 TCCGTCCCACCTCTCTGC 60.680 66.667 0.00 0.00 0.00 4.26
405 408 1.304547 ACTCCGTCCCACCTCTCTG 60.305 63.158 0.00 0.00 0.00 3.35
406 409 1.000646 GACTCCGTCCCACCTCTCT 60.001 63.158 0.00 0.00 0.00 3.10
407 410 2.408241 CGACTCCGTCCCACCTCTC 61.408 68.421 0.00 0.00 0.00 3.20
408 411 2.212794 ATCGACTCCGTCCCACCTCT 62.213 60.000 0.00 0.00 37.05 3.69
409 412 0.465097 TATCGACTCCGTCCCACCTC 60.465 60.000 0.00 0.00 37.05 3.85
410 413 0.750911 GTATCGACTCCGTCCCACCT 60.751 60.000 0.00 0.00 37.05 4.00
411 414 1.732308 GTATCGACTCCGTCCCACC 59.268 63.158 0.00 0.00 37.05 4.61
412 415 1.354506 CGTATCGACTCCGTCCCAC 59.645 63.158 0.00 0.00 37.05 4.61
413 416 1.820906 CCGTATCGACTCCGTCCCA 60.821 63.158 0.00 0.00 37.05 4.37
414 417 1.821332 ACCGTATCGACTCCGTCCC 60.821 63.158 0.00 0.00 37.05 4.46
415 418 1.354506 CACCGTATCGACTCCGTCC 59.645 63.158 0.00 0.00 37.05 4.79
416 419 1.354506 CCACCGTATCGACTCCGTC 59.645 63.158 0.00 0.00 37.05 4.79
417 420 2.768492 GCCACCGTATCGACTCCGT 61.768 63.158 0.00 0.00 37.05 4.69
418 421 2.025727 GCCACCGTATCGACTCCG 59.974 66.667 0.00 0.00 37.07 4.63
419 422 2.025727 CGCCACCGTATCGACTCC 59.974 66.667 0.00 0.00 0.00 3.85
420 423 2.025727 CCGCCACCGTATCGACTC 59.974 66.667 0.00 0.00 0.00 3.36
421 424 4.203076 GCCGCCACCGTATCGACT 62.203 66.667 0.00 0.00 0.00 4.18
434 437 4.221422 TCTCATACAGCCCGCCGC 62.221 66.667 0.00 0.00 37.98 6.53
435 438 2.279517 GTCTCATACAGCCCGCCG 60.280 66.667 0.00 0.00 0.00 6.46
436 439 2.279517 CGTCTCATACAGCCCGCC 60.280 66.667 0.00 0.00 0.00 6.13
437 440 2.279517 CCGTCTCATACAGCCCGC 60.280 66.667 0.00 0.00 0.00 6.13
438 441 2.279517 GCCGTCTCATACAGCCCG 60.280 66.667 0.00 0.00 0.00 6.13
439 442 2.279517 CGCCGTCTCATACAGCCC 60.280 66.667 0.00 0.00 0.00 5.19
440 443 2.279517 CCGCCGTCTCATACAGCC 60.280 66.667 0.00 0.00 0.00 4.85
441 444 1.878522 CACCGCCGTCTCATACAGC 60.879 63.158 0.00 0.00 0.00 4.40
442 445 0.525668 GTCACCGCCGTCTCATACAG 60.526 60.000 0.00 0.00 0.00 2.74
443 446 1.245376 TGTCACCGCCGTCTCATACA 61.245 55.000 0.00 0.00 0.00 2.29
444 447 0.108992 TTGTCACCGCCGTCTCATAC 60.109 55.000 0.00 0.00 0.00 2.39
445 448 0.821517 ATTGTCACCGCCGTCTCATA 59.178 50.000 0.00 0.00 0.00 2.15
446 449 0.036388 AATTGTCACCGCCGTCTCAT 60.036 50.000 0.00 0.00 0.00 2.90
447 450 0.948623 CAATTGTCACCGCCGTCTCA 60.949 55.000 0.00 0.00 0.00 3.27
448 451 0.669318 TCAATTGTCACCGCCGTCTC 60.669 55.000 5.13 0.00 0.00 3.36
449 452 0.036388 ATCAATTGTCACCGCCGTCT 60.036 50.000 5.13 0.00 0.00 4.18
450 453 0.096976 CATCAATTGTCACCGCCGTC 59.903 55.000 5.13 0.00 0.00 4.79
451 454 1.922135 GCATCAATTGTCACCGCCGT 61.922 55.000 5.13 0.00 0.00 5.68
452 455 1.226379 GCATCAATTGTCACCGCCG 60.226 57.895 5.13 0.00 0.00 6.46
453 456 1.226379 CGCATCAATTGTCACCGCC 60.226 57.895 5.13 0.00 0.00 6.13
454 457 1.226379 CCGCATCAATTGTCACCGC 60.226 57.895 5.13 1.81 0.00 5.68
455 458 1.429021 CCCGCATCAATTGTCACCG 59.571 57.895 5.13 4.71 0.00 4.94
456 459 1.666209 CCCCCGCATCAATTGTCACC 61.666 60.000 5.13 0.00 0.00 4.02
457 460 0.679640 TCCCCCGCATCAATTGTCAC 60.680 55.000 5.13 0.00 0.00 3.67
458 461 0.038890 TTCCCCCGCATCAATTGTCA 59.961 50.000 5.13 0.00 0.00 3.58
459 462 0.455815 GTTCCCCCGCATCAATTGTC 59.544 55.000 5.13 0.00 0.00 3.18
460 463 0.251564 TGTTCCCCCGCATCAATTGT 60.252 50.000 5.13 0.00 0.00 2.71
461 464 0.457035 CTGTTCCCCCGCATCAATTG 59.543 55.000 0.00 0.00 0.00 2.32
462 465 0.684153 CCTGTTCCCCCGCATCAATT 60.684 55.000 0.00 0.00 0.00 2.32
463 466 1.076777 CCTGTTCCCCCGCATCAAT 60.077 57.895 0.00 0.00 0.00 2.57
464 467 2.196997 CTCCTGTTCCCCCGCATCAA 62.197 60.000 0.00 0.00 0.00 2.57
465 468 2.609299 TCCTGTTCCCCCGCATCA 60.609 61.111 0.00 0.00 0.00 3.07
466 469 2.190578 CTCCTGTTCCCCCGCATC 59.809 66.667 0.00 0.00 0.00 3.91
467 470 2.285368 TCTCCTGTTCCCCCGCAT 60.285 61.111 0.00 0.00 0.00 4.73
468 471 3.003173 CTCTCCTGTTCCCCCGCA 61.003 66.667 0.00 0.00 0.00 5.69
469 472 3.787001 CCTCTCCTGTTCCCCCGC 61.787 72.222 0.00 0.00 0.00 6.13
470 473 3.083997 CCCTCTCCTGTTCCCCCG 61.084 72.222 0.00 0.00 0.00 5.73
471 474 2.125225 ACCCTCTCCTGTTCCCCC 59.875 66.667 0.00 0.00 0.00 5.40
472 475 2.301738 CCACCCTCTCCTGTTCCCC 61.302 68.421 0.00 0.00 0.00 4.81
473 476 1.539124 ACCACCCTCTCCTGTTCCC 60.539 63.158 0.00 0.00 0.00 3.97
474 477 0.836400 TCACCACCCTCTCCTGTTCC 60.836 60.000 0.00 0.00 0.00 3.62
475 478 1.002544 CTTCACCACCCTCTCCTGTTC 59.997 57.143 0.00 0.00 0.00 3.18
476 479 1.059913 CTTCACCACCCTCTCCTGTT 58.940 55.000 0.00 0.00 0.00 3.16
477 480 0.838122 CCTTCACCACCCTCTCCTGT 60.838 60.000 0.00 0.00 0.00 4.00
478 481 0.545309 TCCTTCACCACCCTCTCCTG 60.545 60.000 0.00 0.00 0.00 3.86
479 482 0.252467 CTCCTTCACCACCCTCTCCT 60.252 60.000 0.00 0.00 0.00 3.69
480 483 0.252284 TCTCCTTCACCACCCTCTCC 60.252 60.000 0.00 0.00 0.00 3.71
481 484 0.899019 GTCTCCTTCACCACCCTCTC 59.101 60.000 0.00 0.00 0.00 3.20
482 485 0.191064 TGTCTCCTTCACCACCCTCT 59.809 55.000 0.00 0.00 0.00 3.69
483 486 0.610687 CTGTCTCCTTCACCACCCTC 59.389 60.000 0.00 0.00 0.00 4.30
484 487 0.191064 TCTGTCTCCTTCACCACCCT 59.809 55.000 0.00 0.00 0.00 4.34
485 488 0.321996 GTCTGTCTCCTTCACCACCC 59.678 60.000 0.00 0.00 0.00 4.61
486 489 1.048601 TGTCTGTCTCCTTCACCACC 58.951 55.000 0.00 0.00 0.00 4.61
487 490 2.300152 TCATGTCTGTCTCCTTCACCAC 59.700 50.000 0.00 0.00 0.00 4.16
488 491 2.564504 CTCATGTCTGTCTCCTTCACCA 59.435 50.000 0.00 0.00 0.00 4.17
489 492 2.828520 TCTCATGTCTGTCTCCTTCACC 59.171 50.000 0.00 0.00 0.00 4.02
490 493 4.241681 GTTCTCATGTCTGTCTCCTTCAC 58.758 47.826 0.00 0.00 0.00 3.18
491 494 3.897505 TGTTCTCATGTCTGTCTCCTTCA 59.102 43.478 0.00 0.00 0.00 3.02
492 495 4.219507 TCTGTTCTCATGTCTGTCTCCTTC 59.780 45.833 0.00 0.00 0.00 3.46
493 496 4.155709 TCTGTTCTCATGTCTGTCTCCTT 58.844 43.478 0.00 0.00 0.00 3.36
494 497 3.772387 TCTGTTCTCATGTCTGTCTCCT 58.228 45.455 0.00 0.00 0.00 3.69
495 498 4.493547 CTTCTGTTCTCATGTCTGTCTCC 58.506 47.826 0.00 0.00 0.00 3.71
496 499 3.925913 GCTTCTGTTCTCATGTCTGTCTC 59.074 47.826 0.00 0.00 0.00 3.36
497 500 3.323115 TGCTTCTGTTCTCATGTCTGTCT 59.677 43.478 0.00 0.00 0.00 3.41
498 501 3.657634 TGCTTCTGTTCTCATGTCTGTC 58.342 45.455 0.00 0.00 0.00 3.51
499 502 3.758755 TGCTTCTGTTCTCATGTCTGT 57.241 42.857 0.00 0.00 0.00 3.41
500 503 6.922247 AATATGCTTCTGTTCTCATGTCTG 57.078 37.500 0.00 0.00 0.00 3.51
501 504 6.541641 GGAAATATGCTTCTGTTCTCATGTCT 59.458 38.462 0.00 0.00 0.00 3.41
502 505 6.541641 AGGAAATATGCTTCTGTTCTCATGTC 59.458 38.462 0.00 0.00 0.00 3.06
516 519 3.007398 CCCTCTTCGCTAGGAAATATGCT 59.993 47.826 0.00 0.00 36.08 3.79
531 534 0.608640 TCTTCTTCGTGCCCCTCTTC 59.391 55.000 0.00 0.00 0.00 2.87
532 535 1.208293 GATCTTCTTCGTGCCCCTCTT 59.792 52.381 0.00 0.00 0.00 2.85
563 566 1.973812 AGCCGGAAGCCTCAAAAGC 60.974 57.895 5.05 0.00 45.47 3.51
578 581 1.081242 CCATTTCACGTGTGCAGCC 60.081 57.895 16.51 0.00 0.00 4.85
582 585 1.586154 CCCTCCCATTTCACGTGTGC 61.586 60.000 16.51 0.00 0.00 4.57
588 591 1.076705 GGAGCCCCTCCCATTTCAC 60.077 63.158 0.00 0.00 44.36 3.18
659 662 2.738743 CTTGTGGGATGGCTTATGGTT 58.261 47.619 0.00 0.00 0.00 3.67
693 696 4.100189 ACTGCATTGTCTCTATCTACCACC 59.900 45.833 0.00 0.00 0.00 4.61
701 704 5.532406 ACACACAAAACTGCATTGTCTCTAT 59.468 36.000 1.17 0.00 38.90 1.98
1186 10866 2.424733 GGTACCGTGGAGGGAGAGC 61.425 68.421 0.00 0.00 46.96 4.09
1187 10867 1.000019 TGGTACCGTGGAGGGAGAG 60.000 63.158 7.57 0.00 46.96 3.20
1436 11116 3.817709 GCCTCAGCTTCTGAATAGACT 57.182 47.619 0.00 0.00 40.18 3.24
1488 11168 1.948104 TCGCTTCCGTAATCCATTGG 58.052 50.000 0.00 0.00 35.54 3.16
1750 11433 6.376581 CCACTAGAATCTTTCAGCCTCAAATT 59.623 38.462 0.00 0.00 0.00 1.82
1777 11460 3.700538 AGATATGAAAAGCAGGTTGGCA 58.299 40.909 0.00 0.00 35.83 4.92
2064 11747 1.338200 CGCCCTCTTAACTGCAGAACT 60.338 52.381 23.35 6.84 0.00 3.01
2206 11892 1.210478 AGATGATTGAACTGGTCGGGG 59.790 52.381 0.00 0.00 0.00 5.73
2253 11939 6.078456 TCCAGAATGTATCCCAGTTCATTT 57.922 37.500 0.00 0.00 31.87 2.32
2329 12015 5.041951 TGACAAAATTGTAGGATGAACGC 57.958 39.130 0.00 0.00 42.43 4.84
2342 12028 1.877443 AGTACCGCGCTTGACAAAATT 59.123 42.857 5.56 0.00 0.00 1.82
2365 16005 6.992123 GGAATCTCTCAAAACCAACCAAAAAT 59.008 34.615 0.00 0.00 0.00 1.82
2371 16011 4.398319 TCAGGAATCTCTCAAAACCAACC 58.602 43.478 0.00 0.00 0.00 3.77
2372 16012 6.209361 GTTTCAGGAATCTCTCAAAACCAAC 58.791 40.000 0.00 0.00 0.00 3.77
2373 16013 5.301805 GGTTTCAGGAATCTCTCAAAACCAA 59.698 40.000 8.75 0.00 39.77 3.67
2374 16014 4.827284 GGTTTCAGGAATCTCTCAAAACCA 59.173 41.667 8.75 0.00 39.77 3.67
2375 16015 4.827284 TGGTTTCAGGAATCTCTCAAAACC 59.173 41.667 7.07 7.07 40.08 3.27
2376 16016 6.263168 TCTTGGTTTCAGGAATCTCTCAAAAC 59.737 38.462 0.00 0.00 0.00 2.43
2422 16064 1.534595 CAGTTGCCTTCTCTGACTTGC 59.465 52.381 0.00 0.00 0.00 4.01
2426 16068 1.155042 CAGCAGTTGCCTTCTCTGAC 58.845 55.000 0.00 0.00 43.38 3.51
2438 16080 3.430042 ACATTCAGTGATCCAGCAGTT 57.570 42.857 0.00 0.00 0.00 3.16
2468 16113 2.001361 GATGGTGCTGCTGATGGTGC 62.001 60.000 0.00 0.00 0.00 5.01
2529 16174 0.823356 TTCACAAAGCCTGTCTGCCC 60.823 55.000 0.00 0.00 35.47 5.36
2655 16300 3.461773 CTCGTGCCACTCCCGGAT 61.462 66.667 0.73 0.00 0.00 4.18
2673 16318 1.880340 GCACCTCCAATCTCTCGCG 60.880 63.158 0.00 0.00 0.00 5.87
2723 16368 6.980978 GTCATTCCAGAACTATTTCGAGATGA 59.019 38.462 0.00 0.00 36.78 2.92
2839 16488 9.442047 AAAGACATGTTGTTCTATCTTTAGAGG 57.558 33.333 0.00 0.00 35.26 3.69
2862 16513 4.442706 AGCACAAGATACCCGATACAAAG 58.557 43.478 0.00 0.00 0.00 2.77
2912 16566 4.148825 AGCTGCATCCGTCCGTCC 62.149 66.667 1.02 0.00 0.00 4.79
2913 16567 2.887568 CAGCTGCATCCGTCCGTC 60.888 66.667 0.00 0.00 0.00 4.79
2914 16568 4.457496 CCAGCTGCATCCGTCCGT 62.457 66.667 8.66 0.00 0.00 4.69
2916 16570 4.479993 AGCCAGCTGCATCCGTCC 62.480 66.667 8.66 0.00 44.83 4.79
2917 16571 3.200593 CAGCCAGCTGCATCCGTC 61.201 66.667 8.66 0.00 44.83 4.79
2930 16584 3.003068 CGGAATCAATCATCTCAACAGCC 59.997 47.826 0.00 0.00 0.00 4.85
3043 16713 3.520691 ACAATATCAGGGATGCTGCAT 57.479 42.857 16.20 16.20 0.00 3.96
3064 16734 3.258622 GGTCCAACAAGTAGCAGTAGTCT 59.741 47.826 0.00 0.00 0.00 3.24
3087 16757 1.748493 GGTCCAGCAAGTTGTTGTTCA 59.252 47.619 17.16 0.00 35.92 3.18
3101 16771 3.624861 GCTTGTTGTGATATCAGGTCCAG 59.375 47.826 5.42 1.50 0.00 3.86
3135 16825 6.788598 TGAAAATTTGGCCAGCTATATGAA 57.211 33.333 5.11 0.00 0.00 2.57
3165 16857 7.642586 GTGTACTTACCATGTTTGTGTCTTTTC 59.357 37.037 0.00 0.00 0.00 2.29
3196 16893 6.963049 ACATATAGACGGTGTTGAAACTTC 57.037 37.500 0.00 0.00 0.00 3.01
3198 16895 8.092687 AGTAAACATATAGACGGTGTTGAAACT 58.907 33.333 0.00 0.00 36.31 2.66
3224 16921 2.622942 GTGTGCCACAAATCCTCTTTGA 59.377 45.455 0.00 0.00 34.08 2.69
3225 16922 2.605338 CGTGTGCCACAAATCCTCTTTG 60.605 50.000 0.00 0.00 33.40 2.77
3273 16970 7.728847 AATATTGAAACTCAAAGGCCAAAAC 57.271 32.000 5.01 0.00 40.12 2.43
3330 17032 2.333014 CCTCTCACAAGAAAGACGAGC 58.667 52.381 0.00 0.00 0.00 5.03
3331 17033 2.928731 GCCCTCTCACAAGAAAGACGAG 60.929 54.545 0.00 0.00 0.00 4.18
3346 17049 3.706594 TGAGTCATATTCGAAAGCCCTCT 59.293 43.478 0.00 0.00 0.00 3.69
3366 17069 6.961359 ATCGTCGAAATGTACTCAAAATGA 57.039 33.333 0.00 0.00 0.00 2.57
3415 17129 3.884693 TCTTTGCATCAAGTTTCAGCAGA 59.115 39.130 0.00 0.00 36.47 4.26
3447 17161 1.740585 CGGTGTCTTTGTGTTTGGACA 59.259 47.619 0.00 0.00 36.52 4.02
3451 17165 2.162608 TGAACCGGTGTCTTTGTGTTTG 59.837 45.455 8.52 0.00 0.00 2.93
3480 17194 5.019498 CGTAGTGTGGAAACATTTATTCGC 58.981 41.667 0.00 0.00 46.14 4.70
3481 17195 6.397831 TCGTAGTGTGGAAACATTTATTCG 57.602 37.500 0.00 0.00 46.14 3.34
3520 17234 7.069208 GCCCTATACTAGGTAGTGTGTACTTTT 59.931 40.741 0.00 0.00 44.73 2.27
3522 17236 6.067350 GCCCTATACTAGGTAGTGTGTACTT 58.933 44.000 0.00 0.00 44.73 2.24
3523 17237 5.372066 AGCCCTATACTAGGTAGTGTGTACT 59.628 44.000 0.00 0.00 44.73 2.73
3524 17238 5.629125 AGCCCTATACTAGGTAGTGTGTAC 58.371 45.833 0.00 0.00 44.73 2.90
3525 17239 5.919348 AGCCCTATACTAGGTAGTGTGTA 57.081 43.478 0.00 0.00 44.73 2.90
3526 17240 4.810584 AGCCCTATACTAGGTAGTGTGT 57.189 45.455 0.00 0.00 44.73 3.72
3527 17241 4.523558 GGAAGCCCTATACTAGGTAGTGTG 59.476 50.000 0.00 0.00 44.73 3.82
3528 17242 4.419537 AGGAAGCCCTATACTAGGTAGTGT 59.580 45.833 0.00 0.00 44.73 3.55
3529 17243 5.000570 AGGAAGCCCTATACTAGGTAGTG 57.999 47.826 0.00 0.00 44.73 2.74
3530 17244 4.921370 AGAGGAAGCCCTATACTAGGTAGT 59.079 45.833 0.00 0.00 44.53 2.73
3532 17246 4.668812 ACAGAGGAAGCCCTATACTAGGTA 59.331 45.833 0.00 0.00 44.53 3.08
3534 17248 4.120946 ACAGAGGAAGCCCTATACTAGG 57.879 50.000 0.00 0.00 44.53 3.02
3535 17249 7.784470 ATTTACAGAGGAAGCCCTATACTAG 57.216 40.000 0.00 0.00 44.53 2.57
3537 17251 8.430431 GTTTATTTACAGAGGAAGCCCTATACT 58.570 37.037 0.00 0.00 44.53 2.12
3538 17252 8.208903 TGTTTATTTACAGAGGAAGCCCTATAC 58.791 37.037 0.00 0.00 44.53 1.47
3539 17253 8.326765 TGTTTATTTACAGAGGAAGCCCTATA 57.673 34.615 0.00 0.00 44.53 1.31
3540 17254 7.208064 TGTTTATTTACAGAGGAAGCCCTAT 57.792 36.000 0.00 0.00 44.53 2.57
3541 17255 6.630203 TGTTTATTTACAGAGGAAGCCCTA 57.370 37.500 0.00 0.00 44.53 3.53
3543 17257 7.773690 TCTTATGTTTATTTACAGAGGAAGCCC 59.226 37.037 0.00 0.00 0.00 5.19
3544 17258 8.732746 TCTTATGTTTATTTACAGAGGAAGCC 57.267 34.615 0.00 0.00 0.00 4.35
3545 17259 8.338986 GCTCTTATGTTTATTTACAGAGGAAGC 58.661 37.037 0.00 0.00 27.20 3.86
3546 17260 8.543774 CGCTCTTATGTTTATTTACAGAGGAAG 58.456 37.037 0.00 0.00 27.20 3.46
3549 17263 7.772332 ACGCTCTTATGTTTATTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
3552 17266 9.820229 TGAAAACGCTCTTATGTTTATTTACAG 57.180 29.630 0.00 0.00 37.31 2.74
3562 17276 9.988350 CACTATTTTATGAAAACGCTCTTATGT 57.012 29.630 0.00 0.00 32.37 2.29
3566 17280 9.167311 AGATCACTATTTTATGAAAACGCTCTT 57.833 29.630 0.00 0.00 32.37 2.85
3567 17281 8.723942 AGATCACTATTTTATGAAAACGCTCT 57.276 30.769 0.00 0.00 32.37 4.09
3594 17308 6.649557 CCTCCGTAAAGAAACATAAGAGTGTT 59.350 38.462 0.00 0.00 43.78 3.32
3595 17309 6.164176 CCTCCGTAAAGAAACATAAGAGTGT 58.836 40.000 0.00 0.00 0.00 3.55
3596 17310 5.581085 CCCTCCGTAAAGAAACATAAGAGTG 59.419 44.000 0.00 0.00 0.00 3.51
3597 17311 5.482878 TCCCTCCGTAAAGAAACATAAGAGT 59.517 40.000 0.00 0.00 0.00 3.24
3598 17312 5.974108 TCCCTCCGTAAAGAAACATAAGAG 58.026 41.667 0.00 0.00 0.00 2.85
3599 17313 5.482878 ACTCCCTCCGTAAAGAAACATAAGA 59.517 40.000 0.00 0.00 0.00 2.10
3600 17314 5.731591 ACTCCCTCCGTAAAGAAACATAAG 58.268 41.667 0.00 0.00 0.00 1.73
3601 17315 5.750352 ACTCCCTCCGTAAAGAAACATAA 57.250 39.130 0.00 0.00 0.00 1.90
3602 17316 5.716228 TGTACTCCCTCCGTAAAGAAACATA 59.284 40.000 0.00 0.00 0.00 2.29
3603 17317 4.529377 TGTACTCCCTCCGTAAAGAAACAT 59.471 41.667 0.00 0.00 0.00 2.71
3604 17318 3.896888 TGTACTCCCTCCGTAAAGAAACA 59.103 43.478 0.00 0.00 0.00 2.83
3605 17319 4.525912 TGTACTCCCTCCGTAAAGAAAC 57.474 45.455 0.00 0.00 0.00 2.78
3606 17320 4.529377 ACATGTACTCCCTCCGTAAAGAAA 59.471 41.667 0.00 0.00 0.00 2.52
3607 17321 4.091549 ACATGTACTCCCTCCGTAAAGAA 58.908 43.478 0.00 0.00 0.00 2.52
3608 17322 3.705051 ACATGTACTCCCTCCGTAAAGA 58.295 45.455 0.00 0.00 0.00 2.52
3609 17323 4.467198 AACATGTACTCCCTCCGTAAAG 57.533 45.455 0.00 0.00 0.00 1.85
3610 17324 5.337491 GGTTAACATGTACTCCCTCCGTAAA 60.337 44.000 8.10 0.00 0.00 2.01
3611 17325 4.160252 GGTTAACATGTACTCCCTCCGTAA 59.840 45.833 8.10 0.00 0.00 3.18
3612 17326 3.701040 GGTTAACATGTACTCCCTCCGTA 59.299 47.826 8.10 0.00 0.00 4.02
3625 17339 6.528537 TTGAATGGATCCTTGGTTAACATG 57.471 37.500 14.23 0.00 0.00 3.21
3626 17340 7.738437 ATTTGAATGGATCCTTGGTTAACAT 57.262 32.000 14.23 0.00 0.00 2.71
3627 17341 7.234371 TGAATTTGAATGGATCCTTGGTTAACA 59.766 33.333 14.23 1.58 0.00 2.41
3628 17342 7.545615 GTGAATTTGAATGGATCCTTGGTTAAC 59.454 37.037 14.23 0.00 0.00 2.01
3629 17343 7.234371 TGTGAATTTGAATGGATCCTTGGTTAA 59.766 33.333 14.23 1.00 0.00 2.01
3630 17344 6.723515 TGTGAATTTGAATGGATCCTTGGTTA 59.276 34.615 14.23 0.00 0.00 2.85
3631 17345 5.543405 TGTGAATTTGAATGGATCCTTGGTT 59.457 36.000 14.23 2.68 0.00 3.67
3666 17380 4.124351 CGGGCACGTAGGAAGCGA 62.124 66.667 0.00 0.00 34.81 4.93
3677 17391 0.605319 TCTGGAAATGTCACGGGCAC 60.605 55.000 0.00 0.00 0.00 5.01
3678 17392 0.109532 TTCTGGAAATGTCACGGGCA 59.890 50.000 0.00 0.00 0.00 5.36
3679 17393 1.200020 CTTTCTGGAAATGTCACGGGC 59.800 52.381 0.00 0.00 0.00 6.13
3680 17394 1.200020 GCTTTCTGGAAATGTCACGGG 59.800 52.381 0.00 0.00 0.00 5.28
3681 17395 1.200020 GGCTTTCTGGAAATGTCACGG 59.800 52.381 0.00 0.00 0.00 4.94
3682 17396 1.200020 GGGCTTTCTGGAAATGTCACG 59.800 52.381 0.00 0.00 0.00 4.35
3683 17397 2.519013 AGGGCTTTCTGGAAATGTCAC 58.481 47.619 0.00 0.00 0.00 3.67
3684 17398 2.892852 CAAGGGCTTTCTGGAAATGTCA 59.107 45.455 0.00 0.00 0.00 3.58
3685 17399 3.157087 TCAAGGGCTTTCTGGAAATGTC 58.843 45.455 0.00 0.00 0.00 3.06
3686 17400 3.243359 TCAAGGGCTTTCTGGAAATGT 57.757 42.857 0.00 0.00 0.00 2.71
3687 17401 4.605640 TTTCAAGGGCTTTCTGGAAATG 57.394 40.909 0.00 0.00 33.20 2.32
3688 17402 5.280164 GGATTTTCAAGGGCTTTCTGGAAAT 60.280 40.000 5.93 0.00 36.78 2.17
3689 17403 4.040339 GGATTTTCAAGGGCTTTCTGGAAA 59.960 41.667 0.00 0.00 35.54 3.13
3690 17404 3.578282 GGATTTTCAAGGGCTTTCTGGAA 59.422 43.478 0.00 0.00 0.00 3.53
3691 17405 3.165071 GGATTTTCAAGGGCTTTCTGGA 58.835 45.455 0.00 0.00 0.00 3.86
3692 17406 2.094545 CGGATTTTCAAGGGCTTTCTGG 60.095 50.000 0.00 0.00 0.00 3.86
3693 17407 2.672195 GCGGATTTTCAAGGGCTTTCTG 60.672 50.000 0.00 0.00 0.00 3.02
3694 17408 1.546029 GCGGATTTTCAAGGGCTTTCT 59.454 47.619 0.00 0.00 0.00 2.52
3695 17409 1.404181 GGCGGATTTTCAAGGGCTTTC 60.404 52.381 0.00 0.00 0.00 2.62
3696 17410 0.608130 GGCGGATTTTCAAGGGCTTT 59.392 50.000 0.00 0.00 0.00 3.51
3697 17411 1.257750 GGGCGGATTTTCAAGGGCTT 61.258 55.000 0.00 0.00 0.00 4.35
3698 17412 1.682344 GGGCGGATTTTCAAGGGCT 60.682 57.895 0.00 0.00 0.00 5.19
3699 17413 1.981853 TGGGCGGATTTTCAAGGGC 60.982 57.895 0.00 0.00 0.00 5.19
3700 17414 1.890174 GTGGGCGGATTTTCAAGGG 59.110 57.895 0.00 0.00 0.00 3.95
3701 17415 1.506262 CGTGGGCGGATTTTCAAGG 59.494 57.895 0.00 0.00 0.00 3.61
3702 17416 1.154035 GCGTGGGCGGATTTTCAAG 60.154 57.895 0.00 0.00 38.78 3.02
3703 17417 1.456196 TTGCGTGGGCGGATTTTCAA 61.456 50.000 0.00 0.00 44.10 2.69
3704 17418 1.456196 TTTGCGTGGGCGGATTTTCA 61.456 50.000 0.00 0.00 44.10 2.69
3705 17419 0.108851 ATTTGCGTGGGCGGATTTTC 60.109 50.000 0.00 0.00 44.10 2.29
3706 17420 0.108851 GATTTGCGTGGGCGGATTTT 60.109 50.000 0.00 0.00 44.10 1.82
3707 17421 1.510844 GATTTGCGTGGGCGGATTT 59.489 52.632 0.00 0.00 44.10 2.17
3708 17422 2.414785 GGATTTGCGTGGGCGGATT 61.415 57.895 0.00 0.00 44.10 3.01
3709 17423 2.828549 GGATTTGCGTGGGCGGAT 60.829 61.111 0.00 0.00 44.10 4.18
3712 17426 4.160635 GACGGATTTGCGTGGGCG 62.161 66.667 0.73 0.00 44.10 6.13
3713 17427 2.746277 AGACGGATTTGCGTGGGC 60.746 61.111 0.73 0.00 40.52 5.36
3714 17428 2.106683 GGAGACGGATTTGCGTGGG 61.107 63.158 0.73 0.00 0.00 4.61
3715 17429 2.106683 GGGAGACGGATTTGCGTGG 61.107 63.158 0.73 0.00 0.00 4.94
3716 17430 2.106683 GGGGAGACGGATTTGCGTG 61.107 63.158 0.73 0.00 0.00 5.34
3717 17431 2.267961 GGGGAGACGGATTTGCGT 59.732 61.111 0.00 0.00 0.00 5.24
3718 17432 2.513897 GGGGGAGACGGATTTGCG 60.514 66.667 0.00 0.00 0.00 4.85
3719 17433 1.153147 GAGGGGGAGACGGATTTGC 60.153 63.158 0.00 0.00 0.00 3.68
3720 17434 1.527370 GGAGGGGGAGACGGATTTG 59.473 63.158 0.00 0.00 0.00 2.32
3721 17435 1.693103 GGGAGGGGGAGACGGATTT 60.693 63.158 0.00 0.00 0.00 2.17
3722 17436 2.040779 GGGAGGGGGAGACGGATT 60.041 66.667 0.00 0.00 0.00 3.01
3723 17437 4.173701 GGGGAGGGGGAGACGGAT 62.174 72.222 0.00 0.00 0.00 4.18
3726 17440 3.667217 TTACGGGGAGGGGGAGACG 62.667 68.421 0.00 0.00 0.00 4.18
3727 17441 0.693430 ATTTACGGGGAGGGGGAGAC 60.693 60.000 0.00 0.00 0.00 3.36
3728 17442 0.045162 AATTTACGGGGAGGGGGAGA 59.955 55.000 0.00 0.00 0.00 3.71
3729 17443 2.629033 AATTTACGGGGAGGGGGAG 58.371 57.895 0.00 0.00 0.00 4.30
3730 17444 4.947567 AATTTACGGGGAGGGGGA 57.052 55.556 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.