Multiple sequence alignment - TraesCS5D01G435000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G435000 chr5D 100.000 4723 0 0 1 4723 490181731 490177009 0.000000e+00 8722.0
1 TraesCS5D01G435000 chr5B 91.077 2544 126 32 516 3016 604291615 604289130 0.000000e+00 3347.0
2 TraesCS5D01G435000 chr5B 92.053 906 45 7 3221 4122 604289000 604288118 0.000000e+00 1249.0
3 TraesCS5D01G435000 chr5B 88.701 177 18 1 4547 4723 604288080 604287906 1.030000e-51 215.0
4 TraesCS5D01G435000 chr5B 92.701 137 10 0 3046 3182 604289131 604288995 1.040000e-46 198.0
5 TraesCS5D01G435000 chr5B 97.872 47 1 0 4379 4425 604288124 604288078 1.090000e-11 82.4
6 TraesCS5D01G435000 chr5A 90.279 1759 96 36 460 2185 611835290 611833574 0.000000e+00 2231.0
7 TraesCS5D01G435000 chr5A 93.062 1009 50 12 3221 4216 611832547 611831546 0.000000e+00 1458.0
8 TraesCS5D01G435000 chr5A 91.587 1046 76 7 2139 3182 611833577 611832542 0.000000e+00 1434.0
9 TraesCS5D01G435000 chr5A 87.634 372 24 7 1 360 611835686 611835325 3.400000e-111 412.0
10 TraesCS5D01G435000 chr3A 83.613 238 32 3 4474 4711 1213042 1212812 2.860000e-52 217.0
11 TraesCS5D01G435000 chr3A 84.186 215 27 4 4490 4704 1243491 1243284 8.010000e-48 202.0
12 TraesCS5D01G435000 chr3A 84.186 215 27 4 4490 4704 1255834 1255627 8.010000e-48 202.0
13 TraesCS5D01G435000 chr3B 84.483 174 22 5 4538 4708 960321 960150 2.920000e-37 167.0
14 TraesCS5D01G435000 chr3B 84.483 174 22 5 4538 4708 964955 964784 2.920000e-37 167.0
15 TraesCS5D01G435000 chr7D 81.176 170 30 2 4543 4711 13299498 13299666 8.240000e-28 135.0
16 TraesCS5D01G435000 chr4A 77.515 169 27 3 4543 4711 723805526 723805369 1.810000e-14 91.6
17 TraesCS5D01G435000 chr7B 84.444 90 11 3 4458 4545 88877437 88877349 8.420000e-13 86.1
18 TraesCS5D01G435000 chr2D 78.814 118 23 2 1745 1861 296704919 296705035 1.410000e-10 78.7
19 TraesCS5D01G435000 chr6B 79.798 99 18 2 4438 4535 678118180 678118277 2.360000e-08 71.3
20 TraesCS5D01G435000 chr7A 81.250 80 13 2 4457 4535 647904784 647904862 3.950000e-06 63.9
21 TraesCS5D01G435000 chr2B 76.852 108 23 2 1748 1854 364961853 364961747 5.100000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G435000 chr5D 490177009 490181731 4722 True 8722.00 8722 100.0000 1 4723 1 chr5D.!!$R1 4722
1 TraesCS5D01G435000 chr5B 604287906 604291615 3709 True 1018.28 3347 92.4808 516 4723 5 chr5B.!!$R1 4207
2 TraesCS5D01G435000 chr5A 611831546 611835686 4140 True 1383.75 2231 90.6405 1 4216 4 chr5A.!!$R1 4215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.108019 GACGGAACCTTGACCCAAGT 59.892 55.0 6.04 0.0 39.58 3.16 F
554 587 0.178944 TCCTCTTCCTCCCGTGTTCA 60.179 55.0 0.00 0.0 0.00 3.18 F
588 621 0.248289 CGCGAGGGAAGGAAAGGTTA 59.752 55.0 0.00 0.0 0.00 2.85 F
694 737 0.794473 CGTGATGATGATGATGCCCG 59.206 55.0 0.00 0.0 0.00 6.13 F
2341 2476 0.040058 AGGGTGCTGATGATTTGCCA 59.960 50.0 0.00 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1770 1852 0.178767 TATGCATTGCCGCTCTGTCT 59.821 50.000 3.54 0.0 0.00 3.41 R
1836 1918 1.824329 TCGACGAGCCATCTCCCTC 60.824 63.158 0.00 0.0 35.94 4.30 R
1896 1978 3.056328 GCCGGGACAACAGCCTTC 61.056 66.667 2.18 0.0 0.00 3.46 R
2673 2809 0.445436 CAAATGTGCGACTCTCCAGC 59.555 55.000 0.00 0.0 0.00 4.85 R
4251 4407 0.034477 AAGGCAATGTCTTACGGGGG 60.034 55.000 0.00 0.0 0.00 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.915141 ACAATTGACCCCTGCTCTTG 58.085 50.000 13.59 0.00 0.00 3.02
39 40 0.329596 ATTGACCCCTGCTCTTGACC 59.670 55.000 0.00 0.00 0.00 4.02
40 41 1.059584 TTGACCCCTGCTCTTGACCA 61.060 55.000 0.00 0.00 0.00 4.02
41 42 1.003233 GACCCCTGCTCTTGACCAC 60.003 63.158 0.00 0.00 0.00 4.16
42 43 2.046892 CCCCTGCTCTTGACCACG 60.047 66.667 0.00 0.00 0.00 4.94
43 44 2.046892 CCCTGCTCTTGACCACGG 60.047 66.667 0.00 0.00 0.00 4.94
44 45 2.583441 CCCTGCTCTTGACCACGGA 61.583 63.158 0.00 0.00 0.00 4.69
45 46 1.374758 CCTGCTCTTGACCACGGAC 60.375 63.158 0.00 0.00 0.00 4.79
46 47 1.734477 CTGCTCTTGACCACGGACG 60.734 63.158 0.00 0.00 0.00 4.79
47 48 2.432628 GCTCTTGACCACGGACGG 60.433 66.667 0.00 0.00 0.00 4.79
58 59 2.047560 CGGACGGAACCTTGACCC 60.048 66.667 0.00 0.00 0.00 4.46
59 60 2.874664 CGGACGGAACCTTGACCCA 61.875 63.158 0.00 0.00 0.00 4.51
60 61 1.452801 GGACGGAACCTTGACCCAA 59.547 57.895 0.00 0.00 0.00 4.12
62 63 0.108019 GACGGAACCTTGACCCAAGT 59.892 55.000 6.04 0.00 39.58 3.16
63 64 0.179029 ACGGAACCTTGACCCAAGTG 60.179 55.000 6.04 1.18 39.58 3.16
67 68 2.672996 CCTTGACCCAAGTGGCCG 60.673 66.667 0.00 0.00 39.58 6.13
159 160 0.306533 TGCTTCCGACGAGCAAAAAC 59.693 50.000 8.62 0.00 46.35 2.43
229 240 1.338337 AGATAGCTCGCAGCACGTAAT 59.662 47.619 10.16 0.00 45.56 1.89
234 245 2.936498 AGCTCGCAGCACGTAATAAAAT 59.064 40.909 10.16 0.00 45.56 1.82
305 317 2.356553 TTAGTGGCCGTGCACGTC 60.357 61.111 34.81 25.28 37.74 4.34
314 326 3.827784 GTGCACGTCGTAGCAGCG 61.828 66.667 18.47 0.00 42.14 5.18
338 350 2.233271 CCATATGCCCCTGAATCACAC 58.767 52.381 0.00 0.00 0.00 3.82
341 353 1.549203 ATGCCCCTGAATCACACAAC 58.451 50.000 0.00 0.00 0.00 3.32
348 361 2.227388 CCTGAATCACACAACTCCAAGC 59.773 50.000 0.00 0.00 0.00 4.01
407 425 9.933723 TTTTTGTTGTATACTAGTACTTCCTCC 57.066 33.333 4.31 0.00 0.00 4.30
408 426 6.932356 TGTTGTATACTAGTACTTCCTCCG 57.068 41.667 4.31 0.00 0.00 4.63
409 427 6.418101 TGTTGTATACTAGTACTTCCTCCGT 58.582 40.000 4.31 0.00 0.00 4.69
410 428 7.564793 TGTTGTATACTAGTACTTCCTCCGTA 58.435 38.462 4.31 0.00 0.00 4.02
411 429 8.213679 TGTTGTATACTAGTACTTCCTCCGTAT 58.786 37.037 4.31 2.47 0.00 3.06
412 430 8.716909 GTTGTATACTAGTACTTCCTCCGTATC 58.283 40.741 4.31 0.00 0.00 2.24
413 431 7.966812 TGTATACTAGTACTTCCTCCGTATCA 58.033 38.462 4.31 0.00 0.00 2.15
414 432 8.093307 TGTATACTAGTACTTCCTCCGTATCAG 58.907 40.741 4.31 0.00 0.00 2.90
415 433 5.627182 ACTAGTACTTCCTCCGTATCAGA 57.373 43.478 0.00 0.00 0.00 3.27
416 434 5.999044 ACTAGTACTTCCTCCGTATCAGAA 58.001 41.667 0.00 0.00 0.00 3.02
417 435 6.603224 ACTAGTACTTCCTCCGTATCAGAAT 58.397 40.000 0.00 0.00 0.00 2.40
418 436 7.743749 ACTAGTACTTCCTCCGTATCAGAATA 58.256 38.462 0.00 0.00 0.00 1.75
419 437 8.384718 ACTAGTACTTCCTCCGTATCAGAATAT 58.615 37.037 0.00 0.00 0.00 1.28
420 438 9.887629 CTAGTACTTCCTCCGTATCAGAATATA 57.112 37.037 0.00 0.00 0.00 0.86
422 440 9.233649 AGTACTTCCTCCGTATCAGAATATAAG 57.766 37.037 0.00 0.00 0.00 1.73
423 441 9.228949 GTACTTCCTCCGTATCAGAATATAAGA 57.771 37.037 0.00 0.00 0.00 2.10
424 442 8.113173 ACTTCCTCCGTATCAGAATATAAGAC 57.887 38.462 0.00 0.00 0.00 3.01
425 443 7.945664 ACTTCCTCCGTATCAGAATATAAGACT 59.054 37.037 0.00 0.00 0.00 3.24
426 444 8.707796 TTCCTCCGTATCAGAATATAAGACTT 57.292 34.615 0.00 0.00 0.00 3.01
427 445 8.707796 TCCTCCGTATCAGAATATAAGACTTT 57.292 34.615 0.00 0.00 0.00 2.66
428 446 9.144298 TCCTCCGTATCAGAATATAAGACTTTT 57.856 33.333 0.00 0.00 0.00 2.27
429 447 9.765795 CCTCCGTATCAGAATATAAGACTTTTT 57.234 33.333 0.00 0.00 0.00 1.94
481 499 2.550978 AGTTGAGAGAAACACCACACG 58.449 47.619 0.00 0.00 32.21 4.49
488 506 0.872388 GAAACACCACACGATCCACC 59.128 55.000 0.00 0.00 0.00 4.61
491 509 2.034879 CACCACACGATCCACCAGC 61.035 63.158 0.00 0.00 0.00 4.85
493 511 1.448540 CCACACGATCCACCAGCTC 60.449 63.158 0.00 0.00 0.00 4.09
496 514 3.071206 ACGATCCACCAGCTCGCT 61.071 61.111 0.00 0.00 35.89 4.93
498 516 1.007964 CGATCCACCAGCTCGCTAG 60.008 63.158 0.00 0.00 0.00 3.42
504 522 4.232878 CCAGCTCGCTAGGCCCAG 62.233 72.222 0.00 0.00 0.00 4.45
509 527 3.432051 CTCGCTAGGCCCAGAACCG 62.432 68.421 0.85 0.00 0.00 4.44
511 529 4.096003 GCTAGGCCCAGAACCGCA 62.096 66.667 0.85 0.00 0.00 5.69
512 530 2.125106 CTAGGCCCAGAACCGCAC 60.125 66.667 0.00 0.00 0.00 5.34
513 531 2.925706 TAGGCCCAGAACCGCACA 60.926 61.111 0.00 0.00 0.00 4.57
535 568 1.165270 AGTGCGCGCCTTTTATCTTT 58.835 45.000 30.77 0.00 0.00 2.52
537 570 0.450184 TGCGCGCCTTTTATCTTTCC 59.550 50.000 30.77 0.00 0.00 3.13
538 571 0.733150 GCGCGCCTTTTATCTTTCCT 59.267 50.000 23.24 0.00 0.00 3.36
539 572 1.268083 GCGCGCCTTTTATCTTTCCTC 60.268 52.381 23.24 0.00 0.00 3.71
540 573 2.280628 CGCGCCTTTTATCTTTCCTCT 58.719 47.619 0.00 0.00 0.00 3.69
541 574 2.678336 CGCGCCTTTTATCTTTCCTCTT 59.322 45.455 0.00 0.00 0.00 2.85
542 575 3.242446 CGCGCCTTTTATCTTTCCTCTTC 60.242 47.826 0.00 0.00 0.00 2.87
543 576 3.065510 GCGCCTTTTATCTTTCCTCTTCC 59.934 47.826 0.00 0.00 0.00 3.46
544 577 4.518249 CGCCTTTTATCTTTCCTCTTCCT 58.482 43.478 0.00 0.00 0.00 3.36
545 578 4.572795 CGCCTTTTATCTTTCCTCTTCCTC 59.427 45.833 0.00 0.00 0.00 3.71
546 579 4.884744 GCCTTTTATCTTTCCTCTTCCTCC 59.115 45.833 0.00 0.00 0.00 4.30
547 580 5.441500 CCTTTTATCTTTCCTCTTCCTCCC 58.558 45.833 0.00 0.00 0.00 4.30
548 581 4.755266 TTTATCTTTCCTCTTCCTCCCG 57.245 45.455 0.00 0.00 0.00 5.14
549 582 2.255770 ATCTTTCCTCTTCCTCCCGT 57.744 50.000 0.00 0.00 0.00 5.28
550 583 1.267121 TCTTTCCTCTTCCTCCCGTG 58.733 55.000 0.00 0.00 0.00 4.94
551 584 0.977395 CTTTCCTCTTCCTCCCGTGT 59.023 55.000 0.00 0.00 0.00 4.49
552 585 1.348036 CTTTCCTCTTCCTCCCGTGTT 59.652 52.381 0.00 0.00 0.00 3.32
553 586 0.974383 TTCCTCTTCCTCCCGTGTTC 59.026 55.000 0.00 0.00 0.00 3.18
554 587 0.178944 TCCTCTTCCTCCCGTGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
560 593 2.472695 TCCTCCCGTGTTCATTCTTG 57.527 50.000 0.00 0.00 0.00 3.02
586 619 2.663196 CGCGAGGGAAGGAAAGGT 59.337 61.111 0.00 0.00 0.00 3.50
588 621 0.248289 CGCGAGGGAAGGAAAGGTTA 59.752 55.000 0.00 0.00 0.00 2.85
589 622 1.739371 CGCGAGGGAAGGAAAGGTTAG 60.739 57.143 0.00 0.00 0.00 2.34
592 631 3.370633 GCGAGGGAAGGAAAGGTTAGATT 60.371 47.826 0.00 0.00 0.00 2.40
671 710 2.032681 GTGGAAAGCTCACCGGCT 59.967 61.111 0.00 0.00 45.30 5.52
675 714 2.048127 AAAGCTCACCGGCTCGAC 60.048 61.111 0.00 0.00 42.24 4.20
679 718 3.733960 CTCACCGGCTCGACGTGA 61.734 66.667 0.00 0.00 0.00 4.35
694 737 0.794473 CGTGATGATGATGATGCCCG 59.206 55.000 0.00 0.00 0.00 6.13
712 755 2.189499 GCCCGCTTATTCCCAGCTG 61.189 63.158 6.78 6.78 34.88 4.24
743 786 1.516161 TCGTACCACTATCCGGATCG 58.484 55.000 23.08 18.10 0.00 3.69
817 864 4.146075 GCTCAGCTCAGCTCGGCT 62.146 66.667 0.67 4.31 36.40 5.52
818 865 2.104729 CTCAGCTCAGCTCGGCTC 59.895 66.667 0.00 0.00 36.40 4.70
819 866 3.754740 CTCAGCTCAGCTCGGCTCG 62.755 68.421 0.00 4.44 36.40 5.03
861 908 2.359975 CACCACTCCCCGCCTTTC 60.360 66.667 0.00 0.00 0.00 2.62
862 909 3.647771 ACCACTCCCCGCCTTTCC 61.648 66.667 0.00 0.00 0.00 3.13
863 910 4.426313 CCACTCCCCGCCTTTCCC 62.426 72.222 0.00 0.00 0.00 3.97
864 911 4.426313 CACTCCCCGCCTTTCCCC 62.426 72.222 0.00 0.00 0.00 4.81
865 912 4.677151 ACTCCCCGCCTTTCCCCT 62.677 66.667 0.00 0.00 0.00 4.79
866 913 3.798511 CTCCCCGCCTTTCCCCTC 61.799 72.222 0.00 0.00 0.00 4.30
1401 1474 2.441164 GAGCTCGCCTCCCTCTCA 60.441 66.667 0.00 0.00 34.35 3.27
1632 1714 3.805928 CAGTCCACTGCCCCTGTA 58.194 61.111 0.00 0.00 37.15 2.74
1716 1798 4.091939 GTGGGGGAGTACGTGGGC 62.092 72.222 0.00 0.00 0.00 5.36
1719 1801 3.834799 GGGGAGTACGTGGGCGAG 61.835 72.222 0.00 0.00 42.00 5.03
1836 1918 1.968017 AGCACAGTTGGTCATGGCG 60.968 57.895 0.00 0.00 0.00 5.69
1896 1978 6.652481 TCTCTGAGAGGAAAAGCATTGTTAAG 59.348 38.462 9.97 0.00 0.00 1.85
2011 2096 8.559222 TGTAATTTCATTATGCATAGCAAACG 57.441 30.769 6.50 0.00 43.62 3.60
2014 2099 5.809719 TTCATTATGCATAGCAAACGTCA 57.190 34.783 6.50 0.00 43.62 4.35
2038 2123 7.710475 TCATTCGTGCATTTAGTAATCTCATCA 59.290 33.333 0.00 0.00 0.00 3.07
2039 2124 7.468922 TTCGTGCATTTAGTAATCTCATCAG 57.531 36.000 0.00 0.00 0.00 2.90
2056 2142 6.998074 TCTCATCAGGTATTGTTTTGTGAGTT 59.002 34.615 0.00 0.00 33.96 3.01
2057 2143 7.173218 TCTCATCAGGTATTGTTTTGTGAGTTC 59.827 37.037 0.00 0.00 33.96 3.01
2058 2144 6.770303 TCATCAGGTATTGTTTTGTGAGTTCA 59.230 34.615 0.00 0.00 0.00 3.18
2114 2201 3.623510 GGAGCCTAGCACATTTGTAGAAC 59.376 47.826 0.00 0.00 0.00 3.01
2115 2202 4.508662 GAGCCTAGCACATTTGTAGAACT 58.491 43.478 0.00 0.00 0.00 3.01
2117 2204 6.049955 AGCCTAGCACATTTGTAGAACTTA 57.950 37.500 0.00 0.00 0.00 2.24
2118 2205 6.109359 AGCCTAGCACATTTGTAGAACTTAG 58.891 40.000 0.00 0.00 0.00 2.18
2119 2206 5.875359 GCCTAGCACATTTGTAGAACTTAGT 59.125 40.000 0.00 0.00 0.00 2.24
2120 2207 6.371825 GCCTAGCACATTTGTAGAACTTAGTT 59.628 38.462 0.00 0.00 0.00 2.24
2121 2208 7.624344 GCCTAGCACATTTGTAGAACTTAGTTG 60.624 40.741 0.93 0.00 0.00 3.16
2122 2209 6.002062 AGCACATTTGTAGAACTTAGTTGC 57.998 37.500 0.93 0.00 0.00 4.17
2123 2210 5.530915 AGCACATTTGTAGAACTTAGTTGCA 59.469 36.000 0.93 0.00 0.00 4.08
2126 2213 7.481798 GCACATTTGTAGAACTTAGTTGCATAC 59.518 37.037 0.93 3.85 0.00 2.39
2239 2374 7.543520 GGACAGAATCAGAATTTTGACATTTCC 59.456 37.037 0.00 1.16 32.66 3.13
2341 2476 0.040058 AGGGTGCTGATGATTTGCCA 59.960 50.000 0.00 0.00 0.00 4.92
2368 2503 6.922957 TGTTTCTTTGTTAAGTTGATGCCATC 59.077 34.615 0.00 0.00 32.98 3.51
2371 2506 5.183713 TCTTTGTTAAGTTGATGCCATCTGG 59.816 40.000 6.21 0.00 33.90 3.86
2375 2510 2.119801 AGTTGATGCCATCTGGTGTC 57.880 50.000 6.21 0.00 37.57 3.67
2443 2579 4.661222 TGCTTTGGAGGTGTGATTATCAA 58.339 39.130 0.00 0.00 0.00 2.57
2448 2584 4.009675 TGGAGGTGTGATTATCAACTTGC 58.990 43.478 0.00 1.15 32.63 4.01
2478 2614 8.682128 TCTTTGTTGTTAACACAAACTTGATC 57.318 30.769 21.79 0.00 44.72 2.92
2482 2618 8.459521 TGTTGTTAACACAAACTTGATCTTTG 57.540 30.769 8.07 4.78 44.72 2.77
2519 2655 3.181445 TGACAATTTAGTGACTGGGCTGT 60.181 43.478 0.00 0.00 0.00 4.40
2521 2657 1.826385 ATTTAGTGACTGGGCTGTGC 58.174 50.000 0.00 0.00 0.00 4.57
2540 2676 9.177608 GGCTGTGCATATTTATATTTGGAGATA 57.822 33.333 0.00 0.00 0.00 1.98
2564 2700 6.459923 ACTCAGGATTTAGTTTGTGTCTCTC 58.540 40.000 0.00 0.00 0.00 3.20
2568 2704 7.604164 TCAGGATTTAGTTTGTGTCTCTCATTC 59.396 37.037 0.00 0.00 0.00 2.67
2591 2727 5.044558 CGGAGAGCATAAAAGTACTTCTCC 58.955 45.833 20.64 20.64 38.20 3.71
2637 2773 6.067217 ACTTAATACATTTGGGAGAGTGCT 57.933 37.500 0.00 0.00 0.00 4.40
2673 2809 7.148540 TGTGCTTAAGGTGCTAATTTTAGTACG 60.149 37.037 4.29 0.00 44.21 3.67
2683 2819 5.459434 GCTAATTTTAGTACGCTGGAGAGTC 59.541 44.000 0.00 0.00 33.32 3.36
2725 2861 9.634163 AGTTGCATTGCATGTGATTAATATATG 57.366 29.630 12.95 0.00 38.76 1.78
2768 2905 4.039609 GGCCTAGATGAAATGGGATTTTGG 59.960 45.833 0.00 0.00 31.47 3.28
2784 2921 0.323302 TTGGAAGTATGGCTGCGTGA 59.677 50.000 0.00 0.00 0.00 4.35
2786 2923 0.175760 GGAAGTATGGCTGCGTGAGA 59.824 55.000 0.00 0.00 0.00 3.27
2787 2924 1.281899 GAAGTATGGCTGCGTGAGAC 58.718 55.000 0.00 0.00 0.00 3.36
2788 2925 0.898320 AAGTATGGCTGCGTGAGACT 59.102 50.000 0.00 0.00 0.00 3.24
2789 2926 0.174389 AGTATGGCTGCGTGAGACTG 59.826 55.000 0.00 0.00 0.00 3.51
2790 2927 0.173481 GTATGGCTGCGTGAGACTGA 59.827 55.000 0.00 0.00 0.00 3.41
2791 2928 1.114627 TATGGCTGCGTGAGACTGAT 58.885 50.000 0.00 0.00 0.00 2.90
2799 2937 5.043903 GCTGCGTGAGACTGATAGATAAAA 58.956 41.667 0.00 0.00 0.00 1.52
2852 2990 6.735678 TTTATAGCATCATCGTGTGTGTTT 57.264 33.333 0.00 0.00 0.00 2.83
2923 3061 3.719268 TGAGATGCCTAAATGGTGTGT 57.281 42.857 0.00 0.00 38.35 3.72
2925 3063 2.945668 GAGATGCCTAAATGGTGTGTCC 59.054 50.000 0.00 0.00 38.35 4.02
2945 3083 6.205658 GTGTCCCAGCAATTATATTCTTCTCC 59.794 42.308 0.00 0.00 0.00 3.71
2987 3127 3.728076 TCAGTAGTAATCCATCGTGGC 57.272 47.619 0.00 0.00 37.47 5.01
3003 3143 6.420604 CCATCGTGGCCATTAATAATTGAAAC 59.579 38.462 9.72 0.00 0.00 2.78
3158 3298 1.787281 CGCGACTACAGACTGAACTCG 60.787 57.143 10.08 11.87 0.00 4.18
3182 3322 9.667107 TCGTTTTCTTGTTATCCTTTCATCTAT 57.333 29.630 0.00 0.00 0.00 1.98
3196 3336 9.973661 TCCTTTCATCTATTCCTTATGTGAAAA 57.026 29.630 0.00 0.00 34.78 2.29
3200 3340 8.750515 TCATCTATTCCTTATGTGAAAATGCA 57.249 30.769 0.00 0.00 0.00 3.96
3201 3341 8.843262 TCATCTATTCCTTATGTGAAAATGCAG 58.157 33.333 0.00 0.00 0.00 4.41
3202 3342 8.627403 CATCTATTCCTTATGTGAAAATGCAGT 58.373 33.333 0.00 0.00 0.00 4.40
3203 3343 7.988737 TCTATTCCTTATGTGAAAATGCAGTG 58.011 34.615 0.00 0.00 0.00 3.66
3204 3344 4.439305 TCCTTATGTGAAAATGCAGTGC 57.561 40.909 8.58 8.58 0.00 4.40
3205 3345 3.119884 TCCTTATGTGAAAATGCAGTGCG 60.120 43.478 11.20 0.00 0.00 5.34
3206 3346 2.261037 TATGTGAAAATGCAGTGCGC 57.739 45.000 11.20 0.00 42.89 6.09
3207 3347 0.599558 ATGTGAAAATGCAGTGCGCT 59.400 45.000 9.73 0.00 43.06 5.92
3208 3348 0.318022 TGTGAAAATGCAGTGCGCTG 60.318 50.000 23.02 23.02 45.23 5.18
3216 3356 4.695231 CAGTGCGCTGCAACCTGC 62.695 66.667 15.44 0.00 41.47 4.85
3301 3441 6.730960 ACGTCTGTTCTGTTTTTCTGTTAA 57.269 33.333 0.00 0.00 0.00 2.01
3302 3442 7.136289 ACGTCTGTTCTGTTTTTCTGTTAAA 57.864 32.000 0.00 0.00 0.00 1.52
3334 3474 9.016438 TGAAACTGTAACTTGGAAAAGTAAACT 57.984 29.630 0.00 0.00 31.72 2.66
3415 3557 4.715534 TTTCATGTCCACCCTTGAGTAA 57.284 40.909 0.00 0.00 0.00 2.24
3418 3560 5.255397 TCATGTCCACCCTTGAGTAATTT 57.745 39.130 0.00 0.00 0.00 1.82
3420 3562 4.715534 TGTCCACCCTTGAGTAATTTGA 57.284 40.909 0.00 0.00 0.00 2.69
3421 3563 5.055265 TGTCCACCCTTGAGTAATTTGAA 57.945 39.130 0.00 0.00 0.00 2.69
3426 3568 5.770162 CCACCCTTGAGTAATTTGAAGTTCT 59.230 40.000 4.17 0.00 0.00 3.01
3427 3569 6.294176 CCACCCTTGAGTAATTTGAAGTTCTG 60.294 42.308 4.17 0.00 0.00 3.02
3452 3594 2.479566 TTGCCACTGTTCTCATCCTC 57.520 50.000 0.00 0.00 0.00 3.71
3461 3603 3.873910 TGTTCTCATCCTCGGGAAATTC 58.126 45.455 0.00 0.00 34.34 2.17
3559 3701 8.424918 AGTTCTATACCATGAATCGTTCTGAAT 58.575 33.333 0.00 0.00 0.00 2.57
3626 3768 4.281182 CCATGACTACTCCACAGGTATACC 59.719 50.000 14.54 14.54 0.00 2.73
3823 3965 4.026886 CGTGCATTGCATTCTTTGATGATG 60.027 41.667 15.49 0.00 41.91 3.07
3976 4119 1.885388 CGTGCGGTGAGTTGTGGAA 60.885 57.895 0.00 0.00 0.00 3.53
4125 4269 2.213499 GAATTATGTGCTGGTCGAGGG 58.787 52.381 0.00 0.00 0.00 4.30
4137 4287 1.076727 TCGAGGGACCTCTGAAGCA 59.923 57.895 15.83 0.00 40.69 3.91
4146 4296 3.751698 GGACCTCTGAAGCACGTTAAATT 59.248 43.478 0.00 0.00 0.00 1.82
4150 4300 4.690748 CCTCTGAAGCACGTTAAATTGAGA 59.309 41.667 0.00 0.00 0.00 3.27
4152 4302 6.293407 CCTCTGAAGCACGTTAAATTGAGAAA 60.293 38.462 0.00 0.00 0.00 2.52
4155 4305 7.643764 TCTGAAGCACGTTAAATTGAGAAAAAG 59.356 33.333 0.00 0.00 0.00 2.27
4159 4309 8.696410 AGCACGTTAAATTGAGAAAAAGAAAA 57.304 26.923 0.00 0.00 0.00 2.29
4160 4310 8.807581 AGCACGTTAAATTGAGAAAAAGAAAAG 58.192 29.630 0.00 0.00 0.00 2.27
4182 4332 1.678101 GCACTGTGCTCTTGAAAACCT 59.322 47.619 24.68 0.00 40.96 3.50
4184 4334 3.429410 GCACTGTGCTCTTGAAAACCTTT 60.429 43.478 24.68 0.00 40.96 3.11
4186 4336 5.170748 CACTGTGCTCTTGAAAACCTTTTT 58.829 37.500 0.00 0.00 0.00 1.94
4216 4372 6.155475 AGGATCTCTCGAAAACCATCTAAG 57.845 41.667 0.00 0.00 0.00 2.18
4217 4373 5.069781 AGGATCTCTCGAAAACCATCTAAGG 59.930 44.000 0.00 0.00 0.00 2.69
4218 4374 4.737855 TCTCTCGAAAACCATCTAAGGG 57.262 45.455 0.00 0.00 0.00 3.95
4219 4375 4.094476 TCTCTCGAAAACCATCTAAGGGT 58.906 43.478 0.00 0.00 41.41 4.34
4220 4376 4.159879 TCTCTCGAAAACCATCTAAGGGTC 59.840 45.833 0.00 0.00 37.77 4.46
4221 4377 4.094476 TCTCGAAAACCATCTAAGGGTCT 58.906 43.478 0.00 0.00 37.77 3.85
4222 4378 4.081642 TCTCGAAAACCATCTAAGGGTCTG 60.082 45.833 0.00 0.00 37.77 3.51
4223 4379 2.678336 CGAAAACCATCTAAGGGTCTGC 59.322 50.000 0.00 0.00 37.77 4.26
4224 4380 3.619979 CGAAAACCATCTAAGGGTCTGCT 60.620 47.826 0.00 0.00 37.77 4.24
4225 4381 4.336280 GAAAACCATCTAAGGGTCTGCTT 58.664 43.478 0.00 0.00 37.77 3.91
4226 4382 3.356529 AACCATCTAAGGGTCTGCTTG 57.643 47.619 0.00 0.00 37.77 4.01
4227 4383 1.561542 ACCATCTAAGGGTCTGCTTGG 59.438 52.381 0.00 0.00 31.49 3.61
4228 4384 1.839994 CCATCTAAGGGTCTGCTTGGA 59.160 52.381 0.00 0.00 0.00 3.53
4229 4385 2.441001 CCATCTAAGGGTCTGCTTGGAT 59.559 50.000 0.00 0.00 32.28 3.41
4230 4386 3.117738 CCATCTAAGGGTCTGCTTGGATT 60.118 47.826 0.00 0.00 30.18 3.01
4231 4387 4.103153 CCATCTAAGGGTCTGCTTGGATTA 59.897 45.833 0.00 0.00 30.18 1.75
4232 4388 5.222007 CCATCTAAGGGTCTGCTTGGATTAT 60.222 44.000 0.00 0.00 30.18 1.28
4233 4389 5.552870 TCTAAGGGTCTGCTTGGATTATC 57.447 43.478 0.00 0.00 0.00 1.75
4234 4390 2.918712 AGGGTCTGCTTGGATTATCG 57.081 50.000 0.00 0.00 0.00 2.92
4235 4391 2.119495 AGGGTCTGCTTGGATTATCGT 58.881 47.619 0.00 0.00 0.00 3.73
4236 4392 2.505819 AGGGTCTGCTTGGATTATCGTT 59.494 45.455 0.00 0.00 0.00 3.85
4237 4393 3.054361 AGGGTCTGCTTGGATTATCGTTT 60.054 43.478 0.00 0.00 0.00 3.60
4238 4394 3.694566 GGGTCTGCTTGGATTATCGTTTT 59.305 43.478 0.00 0.00 0.00 2.43
4239 4395 4.438744 GGGTCTGCTTGGATTATCGTTTTG 60.439 45.833 0.00 0.00 0.00 2.44
4240 4396 4.098416 GTCTGCTTGGATTATCGTTTTGC 58.902 43.478 0.00 0.00 0.00 3.68
4241 4397 4.009675 TCTGCTTGGATTATCGTTTTGCT 58.990 39.130 0.00 0.00 0.00 3.91
4242 4398 4.458989 TCTGCTTGGATTATCGTTTTGCTT 59.541 37.500 0.00 0.00 0.00 3.91
4243 4399 4.732784 TGCTTGGATTATCGTTTTGCTTC 58.267 39.130 0.00 0.00 0.00 3.86
4244 4400 4.105486 GCTTGGATTATCGTTTTGCTTCC 58.895 43.478 0.00 0.00 0.00 3.46
4245 4401 4.142381 GCTTGGATTATCGTTTTGCTTCCT 60.142 41.667 0.00 0.00 0.00 3.36
4246 4402 4.963276 TGGATTATCGTTTTGCTTCCTG 57.037 40.909 0.00 0.00 0.00 3.86
4247 4403 3.128589 TGGATTATCGTTTTGCTTCCTGC 59.871 43.478 0.00 0.00 43.25 4.85
4248 4404 3.378427 GGATTATCGTTTTGCTTCCTGCT 59.622 43.478 0.00 0.00 43.37 4.24
4249 4405 4.142381 GGATTATCGTTTTGCTTCCTGCTT 60.142 41.667 0.00 0.00 43.37 3.91
4250 4406 5.065988 GGATTATCGTTTTGCTTCCTGCTTA 59.934 40.000 0.00 0.00 43.37 3.09
4251 4407 3.831715 ATCGTTTTGCTTCCTGCTTAC 57.168 42.857 0.00 0.00 43.37 2.34
4252 4408 1.877443 TCGTTTTGCTTCCTGCTTACC 59.123 47.619 0.00 0.00 43.37 2.85
4253 4409 1.068541 CGTTTTGCTTCCTGCTTACCC 60.069 52.381 0.00 0.00 43.37 3.69
4254 4410 1.272490 GTTTTGCTTCCTGCTTACCCC 59.728 52.381 0.00 0.00 43.37 4.95
4255 4411 0.251608 TTTGCTTCCTGCTTACCCCC 60.252 55.000 0.00 0.00 43.37 5.40
4256 4412 2.124695 GCTTCCTGCTTACCCCCG 60.125 66.667 0.00 0.00 38.95 5.73
4257 4413 2.967946 GCTTCCTGCTTACCCCCGT 61.968 63.158 0.00 0.00 38.95 5.28
4258 4414 1.619807 GCTTCCTGCTTACCCCCGTA 61.620 60.000 0.00 0.00 38.95 4.02
4259 4415 0.906775 CTTCCTGCTTACCCCCGTAA 59.093 55.000 0.00 0.00 33.39 3.18
4267 4423 2.406596 TTACCCCCGTAAGACATTGC 57.593 50.000 0.00 0.00 43.02 3.56
4268 4424 0.542805 TACCCCCGTAAGACATTGCC 59.457 55.000 0.00 0.00 43.02 4.52
4269 4425 1.205460 ACCCCCGTAAGACATTGCCT 61.205 55.000 0.00 0.00 43.02 4.75
4270 4426 0.034477 CCCCCGTAAGACATTGCCTT 60.034 55.000 0.00 0.00 43.02 4.35
4271 4427 1.094785 CCCCGTAAGACATTGCCTTG 58.905 55.000 0.00 0.00 43.02 3.61
4272 4428 1.613255 CCCCGTAAGACATTGCCTTGT 60.613 52.381 0.00 0.00 43.02 3.16
4273 4429 2.355310 CCCCGTAAGACATTGCCTTGTA 60.355 50.000 0.00 0.00 43.02 2.41
4274 4430 3.340034 CCCGTAAGACATTGCCTTGTAA 58.660 45.455 0.00 0.00 43.02 2.41
4275 4431 3.754323 CCCGTAAGACATTGCCTTGTAAA 59.246 43.478 0.00 0.00 43.02 2.01
4276 4432 4.216687 CCCGTAAGACATTGCCTTGTAAAA 59.783 41.667 0.00 0.00 43.02 1.52
4277 4433 5.278561 CCCGTAAGACATTGCCTTGTAAAAA 60.279 40.000 0.00 0.00 43.02 1.94
4293 4449 1.260544 AAAAAGGTCAGATGGGCTGC 58.739 50.000 0.00 0.00 44.52 5.25
4294 4450 0.407139 AAAAGGTCAGATGGGCTGCT 59.593 50.000 0.00 0.00 44.52 4.24
4295 4451 0.407139 AAAGGTCAGATGGGCTGCTT 59.593 50.000 0.00 0.00 44.52 3.91
4296 4452 0.323178 AAGGTCAGATGGGCTGCTTG 60.323 55.000 0.00 0.00 44.52 4.01
4297 4453 1.751927 GGTCAGATGGGCTGCTTGG 60.752 63.158 0.00 0.00 44.52 3.61
4298 4454 1.001641 GTCAGATGGGCTGCTTGGT 60.002 57.895 0.00 0.00 44.52 3.67
4299 4455 0.610232 GTCAGATGGGCTGCTTGGTT 60.610 55.000 0.00 0.00 44.52 3.67
4300 4456 0.322816 TCAGATGGGCTGCTTGGTTC 60.323 55.000 0.00 0.00 44.52 3.62
4301 4457 1.377725 AGATGGGCTGCTTGGTTCG 60.378 57.895 0.00 0.00 0.00 3.95
4302 4458 1.675641 GATGGGCTGCTTGGTTCGT 60.676 57.895 0.00 0.00 0.00 3.85
4303 4459 1.648467 GATGGGCTGCTTGGTTCGTC 61.648 60.000 0.00 0.00 0.00 4.20
4304 4460 3.423154 GGGCTGCTTGGTTCGTCG 61.423 66.667 0.00 0.00 0.00 5.12
4305 4461 2.665185 GGCTGCTTGGTTCGTCGT 60.665 61.111 0.00 0.00 0.00 4.34
4306 4462 1.373748 GGCTGCTTGGTTCGTCGTA 60.374 57.895 0.00 0.00 0.00 3.43
4307 4463 0.739813 GGCTGCTTGGTTCGTCGTAT 60.740 55.000 0.00 0.00 0.00 3.06
4308 4464 0.645868 GCTGCTTGGTTCGTCGTATC 59.354 55.000 0.00 0.00 0.00 2.24
4309 4465 1.990799 CTGCTTGGTTCGTCGTATCA 58.009 50.000 0.00 0.00 0.00 2.15
4310 4466 1.920574 CTGCTTGGTTCGTCGTATCAG 59.079 52.381 0.00 0.00 0.00 2.90
4311 4467 1.278238 GCTTGGTTCGTCGTATCAGG 58.722 55.000 0.00 0.00 0.00 3.86
4312 4468 1.135199 GCTTGGTTCGTCGTATCAGGA 60.135 52.381 0.00 0.00 0.00 3.86
4313 4469 2.527100 CTTGGTTCGTCGTATCAGGAC 58.473 52.381 0.00 0.00 0.00 3.85
4314 4470 1.830279 TGGTTCGTCGTATCAGGACT 58.170 50.000 0.00 0.00 31.33 3.85
4315 4471 1.471287 TGGTTCGTCGTATCAGGACTG 59.529 52.381 0.00 0.00 31.33 3.51
4316 4472 1.471684 GGTTCGTCGTATCAGGACTGT 59.528 52.381 0.00 0.00 31.33 3.55
4317 4473 2.679837 GGTTCGTCGTATCAGGACTGTA 59.320 50.000 0.00 0.00 31.33 2.74
4318 4474 3.127548 GGTTCGTCGTATCAGGACTGTAA 59.872 47.826 0.00 0.00 31.33 2.41
4319 4475 4.094212 GTTCGTCGTATCAGGACTGTAAC 58.906 47.826 0.00 0.00 31.33 2.50
4320 4476 3.337358 TCGTCGTATCAGGACTGTAACA 58.663 45.455 0.00 0.00 31.33 2.41
4321 4477 3.943381 TCGTCGTATCAGGACTGTAACAT 59.057 43.478 0.00 0.00 31.33 2.71
4322 4478 4.397103 TCGTCGTATCAGGACTGTAACATT 59.603 41.667 0.00 0.00 31.33 2.71
4323 4479 5.100259 CGTCGTATCAGGACTGTAACATTT 58.900 41.667 0.00 0.00 31.33 2.32
4324 4480 6.093909 TCGTCGTATCAGGACTGTAACATTTA 59.906 38.462 0.00 0.00 31.33 1.40
4325 4481 6.195983 CGTCGTATCAGGACTGTAACATTTAC 59.804 42.308 0.00 0.00 31.33 2.01
4326 4482 7.031372 GTCGTATCAGGACTGTAACATTTACA 58.969 38.462 0.00 0.00 30.89 2.41
4327 4483 7.008992 GTCGTATCAGGACTGTAACATTTACAC 59.991 40.741 0.00 0.00 30.89 2.90
4328 4484 6.020916 CGTATCAGGACTGTAACATTTACACG 60.021 42.308 0.00 0.00 0.00 4.49
4329 4485 3.991773 TCAGGACTGTAACATTTACACGC 59.008 43.478 0.00 0.00 0.00 5.34
4330 4486 2.991190 AGGACTGTAACATTTACACGCG 59.009 45.455 3.53 3.53 0.00 6.01
4331 4487 2.733026 GGACTGTAACATTTACACGCGT 59.267 45.455 5.58 5.58 0.00 6.01
4332 4488 3.919804 GGACTGTAACATTTACACGCGTA 59.080 43.478 13.44 0.00 0.00 4.42
4333 4489 4.563976 GGACTGTAACATTTACACGCGTAT 59.436 41.667 13.44 1.77 0.00 3.06
4334 4490 5.276067 GGACTGTAACATTTACACGCGTATC 60.276 44.000 13.44 0.00 0.00 2.24
4335 4491 4.563976 ACTGTAACATTTACACGCGTATCC 59.436 41.667 13.44 0.00 0.00 2.59
4336 4492 3.864583 TGTAACATTTACACGCGTATCCC 59.135 43.478 13.44 0.00 0.00 3.85
4337 4493 2.676632 ACATTTACACGCGTATCCCA 57.323 45.000 13.44 0.00 0.00 4.37
4338 4494 2.546778 ACATTTACACGCGTATCCCAG 58.453 47.619 13.44 0.00 0.00 4.45
4339 4495 2.093869 ACATTTACACGCGTATCCCAGT 60.094 45.455 13.44 7.23 0.00 4.00
4340 4496 2.747396 TTTACACGCGTATCCCAGTT 57.253 45.000 13.44 0.00 0.00 3.16
4341 4497 3.865011 TTTACACGCGTATCCCAGTTA 57.135 42.857 13.44 0.00 0.00 2.24
4342 4498 2.849880 TACACGCGTATCCCAGTTAC 57.150 50.000 13.44 0.00 0.00 2.50
4343 4499 0.179156 ACACGCGTATCCCAGTTACG 60.179 55.000 13.44 0.00 43.96 3.18
4347 4503 3.725485 CGTATCCCAGTTACGCACA 57.275 52.632 0.00 0.00 36.40 4.57
4348 4504 2.218953 CGTATCCCAGTTACGCACAT 57.781 50.000 0.00 0.00 36.40 3.21
4349 4505 3.358707 CGTATCCCAGTTACGCACATA 57.641 47.619 0.00 0.00 36.40 2.29
4350 4506 3.708890 CGTATCCCAGTTACGCACATAA 58.291 45.455 0.00 0.00 36.40 1.90
4351 4507 4.304110 CGTATCCCAGTTACGCACATAAT 58.696 43.478 0.00 0.00 36.40 1.28
4352 4508 4.384846 CGTATCCCAGTTACGCACATAATC 59.615 45.833 0.00 0.00 36.40 1.75
4353 4509 3.897141 TCCCAGTTACGCACATAATCA 57.103 42.857 0.00 0.00 0.00 2.57
4354 4510 4.415881 TCCCAGTTACGCACATAATCAT 57.584 40.909 0.00 0.00 0.00 2.45
4355 4511 4.377021 TCCCAGTTACGCACATAATCATC 58.623 43.478 0.00 0.00 0.00 2.92
4356 4512 3.498397 CCCAGTTACGCACATAATCATCC 59.502 47.826 0.00 0.00 0.00 3.51
4357 4513 4.380531 CCAGTTACGCACATAATCATCCT 58.619 43.478 0.00 0.00 0.00 3.24
4358 4514 5.510690 CCCAGTTACGCACATAATCATCCTA 60.511 44.000 0.00 0.00 0.00 2.94
4359 4515 6.166279 CCAGTTACGCACATAATCATCCTAT 58.834 40.000 0.00 0.00 0.00 2.57
4360 4516 6.650807 CCAGTTACGCACATAATCATCCTATT 59.349 38.462 0.00 0.00 0.00 1.73
4361 4517 7.148573 CCAGTTACGCACATAATCATCCTATTC 60.149 40.741 0.00 0.00 0.00 1.75
4362 4518 6.586463 AGTTACGCACATAATCATCCTATTCG 59.414 38.462 0.00 0.00 0.00 3.34
4363 4519 4.883083 ACGCACATAATCATCCTATTCGT 58.117 39.130 0.00 0.00 0.00 3.85
4364 4520 6.020971 ACGCACATAATCATCCTATTCGTA 57.979 37.500 0.00 0.00 0.00 3.43
4365 4521 6.452242 ACGCACATAATCATCCTATTCGTAA 58.548 36.000 0.00 0.00 0.00 3.18
4366 4522 7.097192 ACGCACATAATCATCCTATTCGTAAT 58.903 34.615 0.00 0.00 0.00 1.89
4367 4523 8.248253 ACGCACATAATCATCCTATTCGTAATA 58.752 33.333 0.00 0.00 0.00 0.98
4368 4524 8.532341 CGCACATAATCATCCTATTCGTAATAC 58.468 37.037 0.00 0.00 0.00 1.89
4369 4525 9.366216 GCACATAATCATCCTATTCGTAATACA 57.634 33.333 0.00 0.00 0.00 2.29
4373 4529 9.871238 ATAATCATCCTATTCGTAATACACACC 57.129 33.333 0.00 0.00 0.00 4.16
4374 4530 6.971726 TCATCCTATTCGTAATACACACCT 57.028 37.500 0.00 0.00 0.00 4.00
4375 4531 6.978338 TCATCCTATTCGTAATACACACCTC 58.022 40.000 0.00 0.00 0.00 3.85
4376 4532 5.779529 TCCTATTCGTAATACACACCTCC 57.220 43.478 0.00 0.00 0.00 4.30
4377 4533 4.586001 TCCTATTCGTAATACACACCTCCC 59.414 45.833 0.00 0.00 0.00 4.30
4378 4534 3.832615 ATTCGTAATACACACCTCCCC 57.167 47.619 0.00 0.00 0.00 4.81
4379 4535 2.537633 TCGTAATACACACCTCCCCT 57.462 50.000 0.00 0.00 0.00 4.79
4380 4536 2.104967 TCGTAATACACACCTCCCCTG 58.895 52.381 0.00 0.00 0.00 4.45
4381 4537 1.138266 CGTAATACACACCTCCCCTGG 59.862 57.143 0.00 0.00 0.00 4.45
4382 4538 2.193993 GTAATACACACCTCCCCTGGT 58.806 52.381 0.00 0.00 41.77 4.00
4383 4539 1.286248 AATACACACCTCCCCTGGTC 58.714 55.000 0.00 0.00 38.45 4.02
4384 4540 0.976073 ATACACACCTCCCCTGGTCG 60.976 60.000 0.00 0.00 38.45 4.79
4421 4577 5.413523 GTGGAAATTACTTGTGTCCGGTATT 59.586 40.000 0.00 0.00 0.00 1.89
4422 4578 6.594937 GTGGAAATTACTTGTGTCCGGTATTA 59.405 38.462 0.00 0.00 0.00 0.98
4423 4579 7.281549 GTGGAAATTACTTGTGTCCGGTATTAT 59.718 37.037 0.00 0.00 0.00 1.28
4424 4580 8.484575 TGGAAATTACTTGTGTCCGGTATTATA 58.515 33.333 0.00 0.00 0.00 0.98
4425 4581 8.985805 GGAAATTACTTGTGTCCGGTATTATAG 58.014 37.037 0.00 0.00 0.00 1.31
4426 4582 9.754382 GAAATTACTTGTGTCCGGTATTATAGA 57.246 33.333 0.00 0.00 0.00 1.98
4430 4586 9.537192 TTACTTGTGTCCGGTATTATAGATTTG 57.463 33.333 0.00 0.00 0.00 2.32
4431 4587 7.562135 ACTTGTGTCCGGTATTATAGATTTGT 58.438 34.615 0.00 0.00 0.00 2.83
4432 4588 8.698210 ACTTGTGTCCGGTATTATAGATTTGTA 58.302 33.333 0.00 0.00 0.00 2.41
4433 4589 9.537192 CTTGTGTCCGGTATTATAGATTTGTAA 57.463 33.333 0.00 0.00 0.00 2.41
4434 4590 9.887629 TTGTGTCCGGTATTATAGATTTGTAAA 57.112 29.630 0.00 0.00 0.00 2.01
4449 4605 7.301054 AGATTTGTAAATTCACTTCTGCTTCG 58.699 34.615 0.00 0.00 0.00 3.79
4450 4606 6.612247 TTTGTAAATTCACTTCTGCTTCGA 57.388 33.333 0.00 0.00 0.00 3.71
4451 4607 6.801539 TTGTAAATTCACTTCTGCTTCGAT 57.198 33.333 0.00 0.00 0.00 3.59
4452 4608 7.899178 TTGTAAATTCACTTCTGCTTCGATA 57.101 32.000 0.00 0.00 0.00 2.92
4453 4609 8.492673 TTGTAAATTCACTTCTGCTTCGATAT 57.507 30.769 0.00 0.00 0.00 1.63
4454 4610 9.594478 TTGTAAATTCACTTCTGCTTCGATATA 57.406 29.630 0.00 0.00 0.00 0.86
4455 4611 9.031360 TGTAAATTCACTTCTGCTTCGATATAC 57.969 33.333 0.00 0.00 0.00 1.47
4456 4612 7.484035 AAATTCACTTCTGCTTCGATATACC 57.516 36.000 0.00 0.00 0.00 2.73
4457 4613 4.585955 TCACTTCTGCTTCGATATACCC 57.414 45.455 0.00 0.00 0.00 3.69
4458 4614 3.321111 TCACTTCTGCTTCGATATACCCC 59.679 47.826 0.00 0.00 0.00 4.95
4459 4615 2.633481 ACTTCTGCTTCGATATACCCCC 59.367 50.000 0.00 0.00 0.00 5.40
4474 4630 3.168773 CCCCCTAACACATTGACGG 57.831 57.895 0.00 0.00 0.00 4.79
4475 4631 1.029947 CCCCCTAACACATTGACGGC 61.030 60.000 0.00 0.00 0.00 5.68
4476 4632 1.029947 CCCCTAACACATTGACGGCC 61.030 60.000 0.00 0.00 0.00 6.13
4477 4633 1.366111 CCCTAACACATTGACGGCCG 61.366 60.000 26.86 26.86 0.00 6.13
4478 4634 0.390603 CCTAACACATTGACGGCCGA 60.391 55.000 35.90 10.61 0.00 5.54
4479 4635 0.999406 CTAACACATTGACGGCCGAG 59.001 55.000 35.90 17.62 0.00 4.63
4480 4636 0.604073 TAACACATTGACGGCCGAGA 59.396 50.000 35.90 17.41 0.00 4.04
4481 4637 0.036388 AACACATTGACGGCCGAGAT 60.036 50.000 35.90 18.98 0.00 2.75
4482 4638 0.036388 ACACATTGACGGCCGAGATT 60.036 50.000 35.90 9.58 0.00 2.40
4483 4639 1.206132 ACACATTGACGGCCGAGATTA 59.794 47.619 35.90 12.43 0.00 1.75
4484 4640 1.593006 CACATTGACGGCCGAGATTAC 59.407 52.381 35.90 15.19 0.00 1.89
4485 4641 1.217882 CATTGACGGCCGAGATTACC 58.782 55.000 35.90 11.47 0.00 2.85
4486 4642 0.106149 ATTGACGGCCGAGATTACCC 59.894 55.000 35.90 10.05 0.00 3.69
4487 4643 0.974010 TTGACGGCCGAGATTACCCT 60.974 55.000 35.90 5.18 0.00 4.34
4488 4644 1.067582 GACGGCCGAGATTACCCTG 59.932 63.158 35.90 0.00 0.00 4.45
4489 4645 1.673808 GACGGCCGAGATTACCCTGT 61.674 60.000 35.90 3.54 0.00 4.00
4490 4646 0.396139 ACGGCCGAGATTACCCTGTA 60.396 55.000 35.90 0.00 0.00 2.74
4491 4647 0.031721 CGGCCGAGATTACCCTGTAC 59.968 60.000 24.07 0.00 0.00 2.90
4492 4648 0.391966 GGCCGAGATTACCCTGTACC 59.608 60.000 0.00 0.00 0.00 3.34
4493 4649 0.391966 GCCGAGATTACCCTGTACCC 59.608 60.000 0.00 0.00 0.00 3.69
4494 4650 1.046204 CCGAGATTACCCTGTACCCC 58.954 60.000 0.00 0.00 0.00 4.95
4495 4651 1.412649 CCGAGATTACCCTGTACCCCT 60.413 57.143 0.00 0.00 0.00 4.79
4496 4652 2.395619 CGAGATTACCCTGTACCCCTT 58.604 52.381 0.00 0.00 0.00 3.95
4497 4653 2.364647 CGAGATTACCCTGTACCCCTTC 59.635 54.545 0.00 0.00 0.00 3.46
4498 4654 3.381335 GAGATTACCCTGTACCCCTTCA 58.619 50.000 0.00 0.00 0.00 3.02
4499 4655 3.974642 GAGATTACCCTGTACCCCTTCAT 59.025 47.826 0.00 0.00 0.00 2.57
4500 4656 5.152934 GAGATTACCCTGTACCCCTTCATA 58.847 45.833 0.00 0.00 0.00 2.15
4501 4657 5.544682 AGATTACCCTGTACCCCTTCATAA 58.455 41.667 0.00 0.00 0.00 1.90
4502 4658 6.158260 AGATTACCCTGTACCCCTTCATAAT 58.842 40.000 0.00 0.00 0.00 1.28
4503 4659 7.318401 AGATTACCCTGTACCCCTTCATAATA 58.682 38.462 0.00 0.00 0.00 0.98
4504 4660 7.797617 AGATTACCCTGTACCCCTTCATAATAA 59.202 37.037 0.00 0.00 0.00 1.40
4505 4661 7.768324 TTACCCTGTACCCCTTCATAATAAA 57.232 36.000 0.00 0.00 0.00 1.40
4506 4662 6.262056 ACCCTGTACCCCTTCATAATAAAG 57.738 41.667 0.00 0.00 0.00 1.85
4507 4663 5.133830 ACCCTGTACCCCTTCATAATAAAGG 59.866 44.000 0.00 0.00 42.52 3.11
4516 4672 6.276832 CCTTCATAATAAAGGGGCATGATG 57.723 41.667 0.00 0.00 39.75 3.07
4517 4673 5.186409 CCTTCATAATAAAGGGGCATGATGG 59.814 44.000 0.00 0.00 39.75 3.51
4518 4674 5.337956 TCATAATAAAGGGGCATGATGGT 57.662 39.130 0.00 0.00 0.00 3.55
4519 4675 5.324409 TCATAATAAAGGGGCATGATGGTC 58.676 41.667 0.00 0.00 0.00 4.02
4520 4676 3.979501 AATAAAGGGGCATGATGGTCT 57.020 42.857 0.00 0.00 0.00 3.85
4521 4677 3.979501 ATAAAGGGGCATGATGGTCTT 57.020 42.857 0.00 0.00 0.00 3.01
4522 4678 2.629017 AAAGGGGCATGATGGTCTTT 57.371 45.000 0.00 0.00 0.00 2.52
4523 4679 2.629017 AAGGGGCATGATGGTCTTTT 57.371 45.000 0.00 0.00 0.00 2.27
4524 4680 2.629017 AGGGGCATGATGGTCTTTTT 57.371 45.000 0.00 0.00 0.00 1.94
4557 4713 7.654963 CGTCGACGTAAATATACAGAGAAAA 57.345 36.000 29.08 0.00 32.02 2.29
4561 4717 7.067372 TCGACGTAAATATACAGAGAAAAGGGA 59.933 37.037 0.00 0.00 32.02 4.20
4562 4718 7.703621 CGACGTAAATATACAGAGAAAAGGGAA 59.296 37.037 0.00 0.00 32.02 3.97
4570 4726 2.816672 CAGAGAAAAGGGAAAGCTCACC 59.183 50.000 0.00 0.00 0.00 4.02
4580 4736 3.157087 GGAAAGCTCACCAGGATTCAAA 58.843 45.455 0.00 0.00 0.00 2.69
4603 4759 1.464997 CAAGACCTCGCACTTAAAGGC 59.535 52.381 0.00 0.00 33.21 4.35
4609 4765 2.501865 GCACTTAAAGGCGTGCGC 60.502 61.111 8.17 8.17 45.74 6.09
4617 4773 2.227089 AAAGGCGTGCGCTACTAGCT 62.227 55.000 16.21 0.00 39.60 3.32
4624 4780 2.287069 CGTGCGCTACTAGCTACTTGAT 60.287 50.000 9.73 0.00 39.60 2.57
4630 4786 3.006003 GCTACTAGCTACTTGATCCCACC 59.994 52.174 0.35 0.00 38.45 4.61
4663 4819 4.084013 GGCATTTTGTAGCGCGAAGTATAT 60.084 41.667 12.10 0.00 0.00 0.86
4664 4820 5.119588 GGCATTTTGTAGCGCGAAGTATATA 59.880 40.000 12.10 0.00 0.00 0.86
4675 4831 7.178074 AGCGCGAAGTATATAAGAAAACAAAC 58.822 34.615 12.10 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.272147 GGTCAAGAGCAGGGGTCAATT 60.272 52.381 0.00 0.00 31.89 2.32
36 37 1.666872 CAAGGTTCCGTCCGTGGTC 60.667 63.158 0.00 0.00 34.29 4.02
39 40 1.666872 GGTCAAGGTTCCGTCCGTG 60.667 63.158 0.00 0.00 38.09 4.94
40 41 2.739132 GGTCAAGGTTCCGTCCGT 59.261 61.111 0.00 0.00 0.00 4.69
41 42 2.047560 GGGTCAAGGTTCCGTCCG 60.048 66.667 0.00 0.00 0.00 4.79
42 43 0.605589 CTTGGGTCAAGGTTCCGTCC 60.606 60.000 0.05 0.00 37.77 4.79
43 44 0.108019 ACTTGGGTCAAGGTTCCGTC 59.892 55.000 11.65 0.00 44.81 4.79
44 45 0.179029 CACTTGGGTCAAGGTTCCGT 60.179 55.000 11.65 0.00 44.81 4.69
45 46 0.889186 CCACTTGGGTCAAGGTTCCG 60.889 60.000 11.65 0.00 44.81 4.30
46 47 1.179174 GCCACTTGGGTCAAGGTTCC 61.179 60.000 11.65 0.00 44.81 3.62
47 48 1.179174 GGCCACTTGGGTCAAGGTTC 61.179 60.000 11.65 1.21 44.81 3.62
58 59 0.322456 TTTCCTGATCCGGCCACTTG 60.322 55.000 2.24 0.00 0.00 3.16
59 60 0.322546 GTTTCCTGATCCGGCCACTT 60.323 55.000 2.24 0.00 0.00 3.16
60 61 1.299976 GTTTCCTGATCCGGCCACT 59.700 57.895 2.24 0.00 0.00 4.00
62 63 2.267642 CGTTTCCTGATCCGGCCA 59.732 61.111 2.24 0.00 0.00 5.36
63 64 1.814169 GACGTTTCCTGATCCGGCC 60.814 63.158 0.00 0.00 0.00 6.13
67 68 1.630148 CGACTGACGTTTCCTGATCC 58.370 55.000 0.00 0.00 37.22 3.36
159 160 4.933483 TTTTTGTAGCGCGCCTTG 57.067 50.000 30.33 0.00 0.00 3.61
229 240 1.459450 GCCACTCCTGCGGAATTTTA 58.541 50.000 0.00 0.00 0.00 1.52
259 271 2.668550 GTGCAGGTGGGGTTCGTC 60.669 66.667 0.00 0.00 0.00 4.20
269 281 2.047274 CGTGGGAATCGTGCAGGT 60.047 61.111 6.26 0.00 0.00 4.00
296 308 3.827784 GCTGCTACGACGTGCACG 61.828 66.667 35.99 35.99 46.33 5.34
305 317 1.371758 ATATGGTCGCGCTGCTACG 60.372 57.895 5.56 5.70 0.00 3.51
307 319 1.664649 GCATATGGTCGCGCTGCTA 60.665 57.895 5.56 0.00 0.00 3.49
314 326 0.250901 ATTCAGGGGCATATGGTCGC 60.251 55.000 4.56 0.00 0.00 5.19
320 332 3.053395 AGTTGTGTGATTCAGGGGCATAT 60.053 43.478 0.00 0.00 0.00 1.78
392 410 6.737720 TCTGATACGGAGGAAGTACTAGTA 57.262 41.667 0.00 0.00 0.00 1.82
393 411 5.627182 TCTGATACGGAGGAAGTACTAGT 57.373 43.478 0.00 0.00 0.00 2.57
394 412 8.795842 ATATTCTGATACGGAGGAAGTACTAG 57.204 38.462 0.00 0.00 0.00 2.57
398 416 9.228949 GTCTTATATTCTGATACGGAGGAAGTA 57.771 37.037 0.00 0.00 0.00 2.24
400 418 8.343168 AGTCTTATATTCTGATACGGAGGAAG 57.657 38.462 0.00 0.00 0.00 3.46
401 419 8.707796 AAGTCTTATATTCTGATACGGAGGAA 57.292 34.615 0.00 0.00 0.00 3.36
402 420 8.707796 AAAGTCTTATATTCTGATACGGAGGA 57.292 34.615 0.00 0.00 0.00 3.71
403 421 9.765795 AAAAAGTCTTATATTCTGATACGGAGG 57.234 33.333 0.00 0.00 0.00 4.30
449 467 4.950205 TCTCTCAACTACTCCCGTTTTT 57.050 40.909 0.00 0.00 0.00 1.94
450 468 4.950205 TTCTCTCAACTACTCCCGTTTT 57.050 40.909 0.00 0.00 0.00 2.43
451 469 4.100498 TGTTTCTCTCAACTACTCCCGTTT 59.900 41.667 0.00 0.00 0.00 3.60
452 470 3.640029 TGTTTCTCTCAACTACTCCCGTT 59.360 43.478 0.00 0.00 0.00 4.44
453 471 3.005578 GTGTTTCTCTCAACTACTCCCGT 59.994 47.826 0.00 0.00 0.00 5.28
454 472 3.576648 GTGTTTCTCTCAACTACTCCCG 58.423 50.000 0.00 0.00 0.00 5.14
455 473 3.323979 TGGTGTTTCTCTCAACTACTCCC 59.676 47.826 0.00 0.00 0.00 4.30
456 474 4.202223 TGTGGTGTTTCTCTCAACTACTCC 60.202 45.833 0.00 0.00 0.00 3.85
457 475 4.745620 GTGTGGTGTTTCTCTCAACTACTC 59.254 45.833 0.00 0.00 0.00 2.59
458 476 4.694339 GTGTGGTGTTTCTCTCAACTACT 58.306 43.478 0.00 0.00 0.00 2.57
459 477 3.489785 CGTGTGGTGTTTCTCTCAACTAC 59.510 47.826 0.00 0.00 0.00 2.73
460 478 3.382227 TCGTGTGGTGTTTCTCTCAACTA 59.618 43.478 0.00 0.00 0.00 2.24
461 479 2.167693 TCGTGTGGTGTTTCTCTCAACT 59.832 45.455 0.00 0.00 0.00 3.16
462 480 2.546778 TCGTGTGGTGTTTCTCTCAAC 58.453 47.619 0.00 0.00 0.00 3.18
463 481 2.971660 TCGTGTGGTGTTTCTCTCAA 57.028 45.000 0.00 0.00 0.00 3.02
464 482 2.288825 GGATCGTGTGGTGTTTCTCTCA 60.289 50.000 0.00 0.00 0.00 3.27
465 483 2.288825 TGGATCGTGTGGTGTTTCTCTC 60.289 50.000 0.00 0.00 0.00 3.20
466 484 1.691976 TGGATCGTGTGGTGTTTCTCT 59.308 47.619 0.00 0.00 0.00 3.10
467 485 1.798813 GTGGATCGTGTGGTGTTTCTC 59.201 52.381 0.00 0.00 0.00 2.87
468 486 1.542547 GGTGGATCGTGTGGTGTTTCT 60.543 52.381 0.00 0.00 0.00 2.52
469 487 0.872388 GGTGGATCGTGTGGTGTTTC 59.128 55.000 0.00 0.00 0.00 2.78
481 499 1.365633 CCTAGCGAGCTGGTGGATC 59.634 63.158 7.99 0.00 0.00 3.36
488 506 2.725312 TTCTGGGCCTAGCGAGCTG 61.725 63.158 12.10 0.00 0.00 4.24
491 509 2.501610 GGTTCTGGGCCTAGCGAG 59.498 66.667 12.10 0.00 0.00 5.03
496 514 1.847798 ATTGTGCGGTTCTGGGCCTA 61.848 55.000 4.53 0.00 0.00 3.93
498 516 1.376609 CTATTGTGCGGTTCTGGGCC 61.377 60.000 0.00 0.00 0.00 5.80
510 528 0.109781 AAAAGGCGCGCACTATTGTG 60.110 50.000 34.42 2.65 46.37 3.33
511 529 1.444836 TAAAAGGCGCGCACTATTGT 58.555 45.000 34.42 18.11 0.00 2.71
512 530 2.287915 AGATAAAAGGCGCGCACTATTG 59.712 45.455 34.42 0.00 0.00 1.90
513 531 2.561569 AGATAAAAGGCGCGCACTATT 58.438 42.857 34.42 22.38 0.00 1.73
535 568 0.178944 TGAACACGGGAGGAAGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
537 570 2.234908 AGAATGAACACGGGAGGAAGAG 59.765 50.000 0.00 0.00 0.00 2.85
538 571 2.257207 AGAATGAACACGGGAGGAAGA 58.743 47.619 0.00 0.00 0.00 2.87
539 572 2.744202 CAAGAATGAACACGGGAGGAAG 59.256 50.000 0.00 0.00 0.00 3.46
540 573 2.778299 CAAGAATGAACACGGGAGGAA 58.222 47.619 0.00 0.00 0.00 3.36
541 574 1.610624 GCAAGAATGAACACGGGAGGA 60.611 52.381 0.00 0.00 0.00 3.71
542 575 0.804989 GCAAGAATGAACACGGGAGG 59.195 55.000 0.00 0.00 0.00 4.30
543 576 0.804989 GGCAAGAATGAACACGGGAG 59.195 55.000 0.00 0.00 0.00 4.30
544 577 0.608035 GGGCAAGAATGAACACGGGA 60.608 55.000 0.00 0.00 0.00 5.14
545 578 0.893270 TGGGCAAGAATGAACACGGG 60.893 55.000 0.00 0.00 0.00 5.28
546 579 0.958091 TTGGGCAAGAATGAACACGG 59.042 50.000 0.00 0.00 0.00 4.94
547 580 2.393764 GTTTGGGCAAGAATGAACACG 58.606 47.619 0.00 0.00 0.00 4.49
548 581 2.393764 CGTTTGGGCAAGAATGAACAC 58.606 47.619 0.00 0.00 0.00 3.32
549 582 1.269517 GCGTTTGGGCAAGAATGAACA 60.270 47.619 0.00 0.00 0.00 3.18
550 583 1.418373 GCGTTTGGGCAAGAATGAAC 58.582 50.000 0.00 0.00 0.00 3.18
551 584 0.039617 CGCGTTTGGGCAAGAATGAA 60.040 50.000 0.00 0.00 0.00 2.57
552 585 1.578926 CGCGTTTGGGCAAGAATGA 59.421 52.632 0.00 0.00 0.00 2.57
553 586 4.151417 CGCGTTTGGGCAAGAATG 57.849 55.556 0.00 0.00 0.00 2.67
579 612 9.503427 CACGATTTGATTTAATCTAACCTTTCC 57.497 33.333 6.50 0.00 33.34 3.13
582 615 8.398665 GCTCACGATTTGATTTAATCTAACCTT 58.601 33.333 6.50 0.00 33.34 3.50
583 616 7.254455 CGCTCACGATTTGATTTAATCTAACCT 60.254 37.037 6.50 0.00 43.93 3.50
584 617 6.846283 CGCTCACGATTTGATTTAATCTAACC 59.154 38.462 6.50 0.00 43.93 2.85
586 619 7.764695 TCGCTCACGATTTGATTTAATCTAA 57.235 32.000 6.50 5.46 45.12 2.10
671 710 2.397549 GCATCATCATCATCACGTCGA 58.602 47.619 0.00 0.00 0.00 4.20
675 714 0.794473 CGGGCATCATCATCATCACG 59.206 55.000 0.00 0.00 0.00 4.35
677 716 0.607217 GGCGGGCATCATCATCATCA 60.607 55.000 0.00 0.00 0.00 3.07
678 717 1.310933 GGGCGGGCATCATCATCATC 61.311 60.000 3.27 0.00 0.00 2.92
679 718 1.303888 GGGCGGGCATCATCATCAT 60.304 57.895 3.27 0.00 0.00 2.45
694 737 2.189499 CAGCTGGGAATAAGCGGGC 61.189 63.158 5.57 0.00 45.59 6.13
712 755 7.034397 GGATAGTGGTACGATTAGATTAAGGC 58.966 42.308 0.00 0.00 0.00 4.35
1395 1468 4.200283 GCGGCGAGGTCTGAGAGG 62.200 72.222 12.98 0.00 0.00 3.69
1401 1474 2.123854 TAGGATGCGGCGAGGTCT 60.124 61.111 12.98 4.70 0.00 3.85
1547 1623 3.849953 CTAACAAGTCGGCGCCGC 61.850 66.667 42.78 34.57 39.59 6.53
1632 1714 3.188873 CCGTGTACTCGAACTCTTTCTCT 59.811 47.826 18.29 0.00 0.00 3.10
1716 1798 3.272334 GCATTGCCGGCTACCTCG 61.272 66.667 29.70 10.82 0.00 4.63
1719 1801 3.211963 CCTGCATTGCCGGCTACC 61.212 66.667 29.70 15.27 0.00 3.18
1740 1822 1.338200 GCCTCCACCCTCGCATATAAG 60.338 57.143 0.00 0.00 0.00 1.73
1770 1852 0.178767 TATGCATTGCCGCTCTGTCT 59.821 50.000 3.54 0.00 0.00 3.41
1836 1918 1.824329 TCGACGAGCCATCTCCCTC 60.824 63.158 0.00 0.00 35.94 4.30
1896 1978 3.056328 GCCGGGACAACAGCCTTC 61.056 66.667 2.18 0.00 0.00 3.46
2011 2096 7.234187 TGAGATTACTAAATGCACGAATGAC 57.766 36.000 0.00 0.00 0.00 3.06
2014 2099 7.172190 CCTGATGAGATTACTAAATGCACGAAT 59.828 37.037 0.00 0.00 0.00 3.34
2026 2111 8.950210 CACAAAACAATACCTGATGAGATTACT 58.050 33.333 0.00 0.00 0.00 2.24
2038 2123 5.891551 ACCTTGAACTCACAAAACAATACCT 59.108 36.000 0.00 0.00 0.00 3.08
2039 2124 5.977129 CACCTTGAACTCACAAAACAATACC 59.023 40.000 0.00 0.00 0.00 2.73
2056 2142 6.599244 CCAATATTCTGAAGTTAGCACCTTGA 59.401 38.462 0.00 0.00 0.00 3.02
2057 2143 6.678900 GCCAATATTCTGAAGTTAGCACCTTG 60.679 42.308 0.00 0.00 0.00 3.61
2058 2144 5.358160 GCCAATATTCTGAAGTTAGCACCTT 59.642 40.000 0.00 0.00 0.00 3.50
2269 2404 6.037391 CCTTGCTGCTTCAATTCAAAAGAAAA 59.963 34.615 0.00 0.00 0.00 2.29
2341 2476 7.271511 TGGCATCAACTTAACAAAGAAACAAT 58.728 30.769 0.00 0.00 0.00 2.71
2368 2503 7.970384 TGTTAAATCGCTTATAAAGACACCAG 58.030 34.615 0.00 0.00 0.00 4.00
2375 2510 8.261908 GCTGCAAATGTTAAATCGCTTATAAAG 58.738 33.333 0.00 0.00 0.00 1.85
2448 2584 7.238571 AGTTTGTGTTAACAACAAAGAGTACG 58.761 34.615 24.17 0.00 45.91 3.67
2540 2676 6.042093 TGAGAGACACAAACTAAATCCTGAGT 59.958 38.462 0.00 0.00 0.00 3.41
2564 2700 6.758886 AGAAGTACTTTTATGCTCTCCGAATG 59.241 38.462 10.02 0.00 0.00 2.67
2568 2704 5.044558 GGAGAAGTACTTTTATGCTCTCCG 58.955 45.833 17.56 0.00 33.08 4.63
2591 2727 9.981114 AAGTAACTAAAAATGAATCCACCAAAG 57.019 29.630 0.00 0.00 0.00 2.77
2619 2755 4.884164 GCTAAAGCACTCTCCCAAATGTAT 59.116 41.667 0.00 0.00 41.59 2.29
2673 2809 0.445436 CAAATGTGCGACTCTCCAGC 59.555 55.000 0.00 0.00 0.00 4.85
2725 2861 3.367395 GCCAGAGCCAAATTTTCCACTAC 60.367 47.826 0.00 0.00 0.00 2.73
2741 2877 2.707791 TCCCATTTCATCTAGGCCAGAG 59.292 50.000 5.01 0.93 36.48 3.35
2743 2879 3.803186 ATCCCATTTCATCTAGGCCAG 57.197 47.619 5.01 0.00 0.00 4.85
2768 2905 1.134965 AGTCTCACGCAGCCATACTTC 60.135 52.381 0.00 0.00 0.00 3.01
2835 2973 1.266718 ACCAAACACACACGATGATGC 59.733 47.619 0.00 0.00 0.00 3.91
2852 2990 6.160636 TGGGGATGGTATATTAACTTTGACCA 59.839 38.462 0.00 0.00 41.02 4.02
2885 3023 6.421801 GCATCTCAAGCAACAATTTTGTACTT 59.578 34.615 0.00 1.75 41.31 2.24
2923 3061 5.612688 AGGGAGAAGAATATAATTGCTGGGA 59.387 40.000 0.00 0.00 0.00 4.37
2925 3063 6.537355 TGAGGGAGAAGAATATAATTGCTGG 58.463 40.000 0.00 0.00 0.00 4.85
2945 3083 9.828039 ACTGATGTGTATTATATGCATATGAGG 57.172 33.333 26.21 7.80 33.82 3.86
3120 3260 7.891183 AGTCGCGAATAATTATTAGCTGAAT 57.109 32.000 28.97 24.29 40.61 2.57
3135 3275 2.488545 AGTTCAGTCTGTAGTCGCGAAT 59.511 45.455 15.46 15.46 0.00 3.34
3139 3279 1.197264 ACGAGTTCAGTCTGTAGTCGC 59.803 52.381 27.10 7.81 42.03 5.19
3141 3281 5.521544 AGAAAACGAGTTCAGTCTGTAGTC 58.478 41.667 0.00 2.03 0.00 2.59
3182 3322 4.615682 CGCACTGCATTTTCACATAAGGAA 60.616 41.667 1.11 0.00 0.00 3.36
3183 3323 3.119884 CGCACTGCATTTTCACATAAGGA 60.120 43.478 1.11 0.00 0.00 3.36
3184 3324 3.173599 CGCACTGCATTTTCACATAAGG 58.826 45.455 1.11 0.00 0.00 2.69
3185 3325 2.595536 GCGCACTGCATTTTCACATAAG 59.404 45.455 0.30 0.00 45.45 1.73
3186 3326 2.594321 GCGCACTGCATTTTCACATAA 58.406 42.857 0.30 0.00 45.45 1.90
3187 3327 2.261037 GCGCACTGCATTTTCACATA 57.739 45.000 0.30 0.00 45.45 2.29
3188 3328 3.111536 GCGCACTGCATTTTCACAT 57.888 47.368 0.30 0.00 45.45 3.21
3189 3329 4.632037 GCGCACTGCATTTTCACA 57.368 50.000 0.30 0.00 45.45 3.58
3199 3339 4.695231 GCAGGTTGCAGCGCACTG 62.695 66.667 11.47 8.91 44.26 3.66
3216 3356 0.459899 TACCACGTCTAGCATGCCTG 59.540 55.000 15.66 7.69 0.00 4.85
3217 3357 0.747255 CTACCACGTCTAGCATGCCT 59.253 55.000 15.66 4.37 0.00 4.75
3218 3358 0.460311 ACTACCACGTCTAGCATGCC 59.540 55.000 15.66 0.00 0.00 4.40
3219 3359 3.431922 TTACTACCACGTCTAGCATGC 57.568 47.619 10.51 10.51 0.00 4.06
3220 3360 5.008712 TCTCATTACTACCACGTCTAGCATG 59.991 44.000 0.00 0.00 0.00 4.06
3221 3361 5.131067 TCTCATTACTACCACGTCTAGCAT 58.869 41.667 0.00 0.00 0.00 3.79
3222 3362 4.520179 TCTCATTACTACCACGTCTAGCA 58.480 43.478 0.00 0.00 0.00 3.49
3223 3363 5.692613 ATCTCATTACTACCACGTCTAGC 57.307 43.478 0.00 0.00 0.00 3.42
3224 3364 7.725818 TGTATCTCATTACTACCACGTCTAG 57.274 40.000 0.00 0.00 0.00 2.43
3225 3365 8.565416 CATTGTATCTCATTACTACCACGTCTA 58.435 37.037 0.00 0.00 0.00 2.59
3226 3366 7.284716 TCATTGTATCTCATTACTACCACGTCT 59.715 37.037 0.00 0.00 0.00 4.18
3279 3419 8.614994 AATTTAACAGAAAAACAGAACAGACG 57.385 30.769 0.00 0.00 0.00 4.18
3347 3487 8.708742 GGCAGTTGAAAAATAAACAAATACTCC 58.291 33.333 0.00 0.00 0.00 3.85
3415 3557 6.040842 AGTGGCAATGTTACAGAACTTCAAAT 59.959 34.615 0.00 0.00 36.45 2.32
3418 3560 4.275689 CAGTGGCAATGTTACAGAACTTCA 59.724 41.667 6.80 0.00 36.45 3.02
3420 3562 4.207165 ACAGTGGCAATGTTACAGAACTT 58.793 39.130 15.75 0.00 36.45 2.66
3421 3563 3.820557 ACAGTGGCAATGTTACAGAACT 58.179 40.909 15.75 0.00 36.45 3.01
3426 3568 3.814625 TGAGAACAGTGGCAATGTTACA 58.185 40.909 30.33 27.10 40.86 2.41
3427 3569 4.142600 GGATGAGAACAGTGGCAATGTTAC 60.143 45.833 30.33 25.23 40.86 2.50
3461 3603 7.972277 ACTGCAGCAAAGATATCAAAAGTTATG 59.028 33.333 15.27 0.00 0.00 1.90
3559 3701 6.717084 TCAGAGCGAAGAAGGATAATCATAGA 59.283 38.462 0.00 0.00 0.00 1.98
3626 3768 1.779569 ACGTAGTTGACAAGCCGAAG 58.220 50.000 7.76 0.00 37.78 3.79
3743 3885 3.651206 TGCATTTACATGTGTTTGGCTG 58.349 40.909 9.11 0.00 32.28 4.85
3823 3965 4.623595 TCAGCCAAAACGAAAAAGAAACAC 59.376 37.500 0.00 0.00 0.00 3.32
3890 4032 2.881074 ACACACTATACAGCAAGCTCG 58.119 47.619 0.00 0.00 0.00 5.03
3976 4119 3.008813 ACAGCACTGGAAACATCAGAGAT 59.991 43.478 2.21 0.00 41.51 2.75
4125 4269 4.451096 TCAATTTAACGTGCTTCAGAGGTC 59.549 41.667 0.00 0.00 0.00 3.85
4137 4287 9.020813 GCTCTTTTCTTTTTCTCAATTTAACGT 57.979 29.630 0.00 0.00 0.00 3.99
4146 4296 5.677091 GCACAGTGCTCTTTTCTTTTTCTCA 60.677 40.000 18.92 0.00 40.96 3.27
4193 4343 5.069781 CCTTAGATGGTTTTCGAGAGATCCT 59.930 44.000 0.00 0.00 41.60 3.24
4194 4344 5.293560 CCTTAGATGGTTTTCGAGAGATCC 58.706 45.833 0.00 0.00 41.60 3.36
4195 4345 5.163395 ACCCTTAGATGGTTTTCGAGAGATC 60.163 44.000 0.00 0.00 33.65 2.75
4196 4346 4.717280 ACCCTTAGATGGTTTTCGAGAGAT 59.283 41.667 0.00 0.00 33.65 2.75
4197 4347 4.094476 ACCCTTAGATGGTTTTCGAGAGA 58.906 43.478 0.00 0.00 31.95 3.10
4198 4348 4.160626 AGACCCTTAGATGGTTTTCGAGAG 59.839 45.833 0.00 0.00 35.85 3.20
4199 4349 4.081642 CAGACCCTTAGATGGTTTTCGAGA 60.082 45.833 0.00 0.00 35.85 4.04
4200 4350 4.184629 CAGACCCTTAGATGGTTTTCGAG 58.815 47.826 0.00 0.00 35.85 4.04
4201 4351 3.618997 GCAGACCCTTAGATGGTTTTCGA 60.619 47.826 0.00 0.00 35.85 3.71
4202 4352 2.678336 GCAGACCCTTAGATGGTTTTCG 59.322 50.000 0.00 0.00 35.85 3.46
4216 4372 2.622064 ACGATAATCCAAGCAGACCC 57.378 50.000 0.00 0.00 0.00 4.46
4217 4373 4.662145 CAAAACGATAATCCAAGCAGACC 58.338 43.478 0.00 0.00 0.00 3.85
4218 4374 4.098416 GCAAAACGATAATCCAAGCAGAC 58.902 43.478 0.00 0.00 0.00 3.51
4219 4375 4.009675 AGCAAAACGATAATCCAAGCAGA 58.990 39.130 0.00 0.00 0.00 4.26
4220 4376 4.361451 AGCAAAACGATAATCCAAGCAG 57.639 40.909 0.00 0.00 0.00 4.24
4221 4377 4.380444 GGAAGCAAAACGATAATCCAAGCA 60.380 41.667 0.00 0.00 0.00 3.91
4222 4378 4.105486 GGAAGCAAAACGATAATCCAAGC 58.895 43.478 0.00 0.00 0.00 4.01
4223 4379 5.335127 CAGGAAGCAAAACGATAATCCAAG 58.665 41.667 0.00 0.00 0.00 3.61
4224 4380 4.380444 GCAGGAAGCAAAACGATAATCCAA 60.380 41.667 0.00 0.00 44.79 3.53
4225 4381 3.128589 GCAGGAAGCAAAACGATAATCCA 59.871 43.478 0.00 0.00 44.79 3.41
4226 4382 3.695816 GCAGGAAGCAAAACGATAATCC 58.304 45.455 0.00 0.00 44.79 3.01
4239 4395 1.619807 TACGGGGGTAAGCAGGAAGC 61.620 60.000 0.00 0.00 46.19 3.86
4240 4396 0.906775 TTACGGGGGTAAGCAGGAAG 59.093 55.000 0.00 0.00 0.00 3.46
4241 4397 0.906775 CTTACGGGGGTAAGCAGGAA 59.093 55.000 1.50 0.00 31.28 3.36
4242 4398 0.041535 TCTTACGGGGGTAAGCAGGA 59.958 55.000 8.71 0.00 36.98 3.86
4243 4399 0.177373 GTCTTACGGGGGTAAGCAGG 59.823 60.000 8.71 0.00 36.98 4.85
4244 4400 0.899720 TGTCTTACGGGGGTAAGCAG 59.100 55.000 8.71 0.00 36.98 4.24
4245 4401 1.575419 ATGTCTTACGGGGGTAAGCA 58.425 50.000 8.71 9.98 36.98 3.91
4246 4402 2.285977 CAATGTCTTACGGGGGTAAGC 58.714 52.381 8.71 5.65 36.98 3.09
4247 4403 2.285977 GCAATGTCTTACGGGGGTAAG 58.714 52.381 7.50 7.50 38.05 2.34
4248 4404 1.065272 GGCAATGTCTTACGGGGGTAA 60.065 52.381 0.00 0.00 0.00 2.85
4249 4405 0.542805 GGCAATGTCTTACGGGGGTA 59.457 55.000 0.00 0.00 0.00 3.69
4250 4406 1.205460 AGGCAATGTCTTACGGGGGT 61.205 55.000 0.00 0.00 0.00 4.95
4251 4407 0.034477 AAGGCAATGTCTTACGGGGG 60.034 55.000 0.00 0.00 0.00 5.40
4252 4408 1.094785 CAAGGCAATGTCTTACGGGG 58.905 55.000 0.00 0.00 0.00 5.73
4253 4409 1.821216 ACAAGGCAATGTCTTACGGG 58.179 50.000 0.00 0.00 0.00 5.28
4254 4410 5.365403 TTTTACAAGGCAATGTCTTACGG 57.635 39.130 0.00 0.00 34.75 4.02
4274 4430 1.203100 AGCAGCCCATCTGACCTTTTT 60.203 47.619 0.00 0.00 45.72 1.94
4275 4431 0.407139 AGCAGCCCATCTGACCTTTT 59.593 50.000 0.00 0.00 45.72 2.27
4276 4432 0.407139 AAGCAGCCCATCTGACCTTT 59.593 50.000 0.00 0.00 45.72 3.11
4277 4433 0.323178 CAAGCAGCCCATCTGACCTT 60.323 55.000 0.00 0.00 45.72 3.50
4278 4434 1.302285 CAAGCAGCCCATCTGACCT 59.698 57.895 0.00 0.00 45.72 3.85
4279 4435 1.751927 CCAAGCAGCCCATCTGACC 60.752 63.158 0.00 0.00 45.72 4.02
4280 4436 0.610232 AACCAAGCAGCCCATCTGAC 60.610 55.000 0.00 0.00 45.72 3.51
4281 4437 0.322816 GAACCAAGCAGCCCATCTGA 60.323 55.000 0.00 0.00 45.72 3.27
4282 4438 1.651240 CGAACCAAGCAGCCCATCTG 61.651 60.000 0.00 0.00 45.62 2.90
4283 4439 1.377725 CGAACCAAGCAGCCCATCT 60.378 57.895 0.00 0.00 0.00 2.90
4284 4440 1.648467 GACGAACCAAGCAGCCCATC 61.648 60.000 0.00 0.00 0.00 3.51
4285 4441 1.675641 GACGAACCAAGCAGCCCAT 60.676 57.895 0.00 0.00 0.00 4.00
4286 4442 2.281484 GACGAACCAAGCAGCCCA 60.281 61.111 0.00 0.00 0.00 5.36
4287 4443 2.775032 TACGACGAACCAAGCAGCCC 62.775 60.000 0.00 0.00 0.00 5.19
4288 4444 0.739813 ATACGACGAACCAAGCAGCC 60.740 55.000 0.00 0.00 0.00 4.85
4289 4445 0.645868 GATACGACGAACCAAGCAGC 59.354 55.000 0.00 0.00 0.00 5.25
4290 4446 1.920574 CTGATACGACGAACCAAGCAG 59.079 52.381 0.00 0.00 0.00 4.24
4291 4447 1.403647 CCTGATACGACGAACCAAGCA 60.404 52.381 0.00 0.00 0.00 3.91
4292 4448 1.135199 TCCTGATACGACGAACCAAGC 60.135 52.381 0.00 0.00 0.00 4.01
4293 4449 2.163815 AGTCCTGATACGACGAACCAAG 59.836 50.000 0.00 0.00 35.33 3.61
4294 4450 2.094906 CAGTCCTGATACGACGAACCAA 60.095 50.000 0.00 0.00 35.33 3.67
4295 4451 1.471287 CAGTCCTGATACGACGAACCA 59.529 52.381 0.00 0.00 35.33 3.67
4296 4452 1.471684 ACAGTCCTGATACGACGAACC 59.528 52.381 0.00 0.00 35.33 3.62
4297 4453 2.915738 ACAGTCCTGATACGACGAAC 57.084 50.000 0.00 0.00 35.33 3.95
4298 4454 3.752747 TGTTACAGTCCTGATACGACGAA 59.247 43.478 0.00 0.00 35.33 3.85
4299 4455 3.337358 TGTTACAGTCCTGATACGACGA 58.663 45.455 0.00 0.00 35.33 4.20
4300 4456 3.752412 TGTTACAGTCCTGATACGACG 57.248 47.619 0.40 0.00 35.33 5.12
4301 4457 7.008992 GTGTAAATGTTACAGTCCTGATACGAC 59.991 40.741 0.40 0.00 0.00 4.34
4302 4458 7.031372 GTGTAAATGTTACAGTCCTGATACGA 58.969 38.462 0.40 0.00 0.00 3.43
4303 4459 6.020916 CGTGTAAATGTTACAGTCCTGATACG 60.021 42.308 0.40 0.00 0.00 3.06
4304 4460 6.237755 GCGTGTAAATGTTACAGTCCTGATAC 60.238 42.308 0.40 0.00 0.00 2.24
4305 4461 5.808540 GCGTGTAAATGTTACAGTCCTGATA 59.191 40.000 0.40 0.00 0.00 2.15
4306 4462 4.630069 GCGTGTAAATGTTACAGTCCTGAT 59.370 41.667 0.40 0.00 0.00 2.90
4307 4463 3.991773 GCGTGTAAATGTTACAGTCCTGA 59.008 43.478 0.40 0.00 0.00 3.86
4308 4464 3.181534 CGCGTGTAAATGTTACAGTCCTG 60.182 47.826 0.00 0.00 0.00 3.86
4309 4465 2.991190 CGCGTGTAAATGTTACAGTCCT 59.009 45.455 0.00 0.00 0.00 3.85
4310 4466 2.733026 ACGCGTGTAAATGTTACAGTCC 59.267 45.455 12.93 0.00 0.00 3.85
4311 4467 5.276067 GGATACGCGTGTAAATGTTACAGTC 60.276 44.000 24.59 1.90 33.44 3.51
4312 4468 4.563976 GGATACGCGTGTAAATGTTACAGT 59.436 41.667 24.59 0.00 33.44 3.55
4313 4469 4.026310 GGGATACGCGTGTAAATGTTACAG 60.026 45.833 24.59 0.00 33.44 2.74
4314 4470 3.864583 GGGATACGCGTGTAAATGTTACA 59.135 43.478 24.59 0.00 33.44 2.41
4315 4471 3.864583 TGGGATACGCGTGTAAATGTTAC 59.135 43.478 24.59 0.00 33.44 2.50
4316 4472 4.114073 CTGGGATACGCGTGTAAATGTTA 58.886 43.478 24.59 0.00 33.44 2.41
4317 4473 2.933906 CTGGGATACGCGTGTAAATGTT 59.066 45.455 24.59 0.00 33.44 2.71
4318 4474 2.093869 ACTGGGATACGCGTGTAAATGT 60.094 45.455 24.59 11.25 33.44 2.71
4319 4475 2.546778 ACTGGGATACGCGTGTAAATG 58.453 47.619 24.59 10.58 33.44 2.32
4320 4476 2.973694 ACTGGGATACGCGTGTAAAT 57.026 45.000 24.59 7.05 33.44 1.40
4321 4477 2.747396 AACTGGGATACGCGTGTAAA 57.253 45.000 24.59 0.62 33.44 2.01
4322 4478 2.477694 CGTAACTGGGATACGCGTGTAA 60.478 50.000 24.59 1.10 39.56 2.41
4323 4479 1.063912 CGTAACTGGGATACGCGTGTA 59.936 52.381 24.59 11.86 39.56 2.90
4324 4480 0.179156 CGTAACTGGGATACGCGTGT 60.179 55.000 24.59 17.12 39.56 4.49
4325 4481 2.573802 CGTAACTGGGATACGCGTG 58.426 57.895 24.59 6.18 39.56 5.34
4329 4485 2.218953 ATGTGCGTAACTGGGATACG 57.781 50.000 1.99 1.99 46.64 3.06
4330 4486 5.294356 TGATTATGTGCGTAACTGGGATAC 58.706 41.667 0.00 0.00 0.00 2.24
4331 4487 5.538849 TGATTATGTGCGTAACTGGGATA 57.461 39.130 0.00 0.00 0.00 2.59
4332 4488 4.415881 TGATTATGTGCGTAACTGGGAT 57.584 40.909 0.00 0.00 0.00 3.85
4333 4489 3.897141 TGATTATGTGCGTAACTGGGA 57.103 42.857 0.00 0.00 0.00 4.37
4334 4490 3.498397 GGATGATTATGTGCGTAACTGGG 59.502 47.826 0.00 0.00 0.00 4.45
4335 4491 4.380531 AGGATGATTATGTGCGTAACTGG 58.619 43.478 0.00 0.00 0.00 4.00
4336 4492 7.410835 CGAATAGGATGATTATGTGCGTAACTG 60.411 40.741 0.00 0.00 0.00 3.16
4337 4493 6.586463 CGAATAGGATGATTATGTGCGTAACT 59.414 38.462 0.00 0.00 0.00 2.24
4338 4494 6.365247 ACGAATAGGATGATTATGTGCGTAAC 59.635 38.462 0.00 0.00 0.00 2.50
4339 4495 6.452242 ACGAATAGGATGATTATGTGCGTAA 58.548 36.000 0.00 0.00 0.00 3.18
4340 4496 6.020971 ACGAATAGGATGATTATGTGCGTA 57.979 37.500 0.00 0.00 0.00 4.42
4341 4497 4.883083 ACGAATAGGATGATTATGTGCGT 58.117 39.130 0.00 0.00 0.00 5.24
4342 4498 6.944557 TTACGAATAGGATGATTATGTGCG 57.055 37.500 0.00 0.00 0.00 5.34
4343 4499 9.366216 TGTATTACGAATAGGATGATTATGTGC 57.634 33.333 0.00 0.00 0.00 4.57
4347 4503 9.871238 GGTGTGTATTACGAATAGGATGATTAT 57.129 33.333 0.00 0.00 0.00 1.28
4348 4504 9.085645 AGGTGTGTATTACGAATAGGATGATTA 57.914 33.333 0.00 0.00 0.00 1.75
4349 4505 7.963532 AGGTGTGTATTACGAATAGGATGATT 58.036 34.615 0.00 0.00 0.00 2.57
4350 4506 7.309867 GGAGGTGTGTATTACGAATAGGATGAT 60.310 40.741 0.00 0.00 0.00 2.45
4351 4507 6.015688 GGAGGTGTGTATTACGAATAGGATGA 60.016 42.308 0.00 0.00 0.00 2.92
4352 4508 6.157211 GGAGGTGTGTATTACGAATAGGATG 58.843 44.000 0.00 0.00 0.00 3.51
4353 4509 5.245526 GGGAGGTGTGTATTACGAATAGGAT 59.754 44.000 0.00 0.00 0.00 3.24
4354 4510 4.586001 GGGAGGTGTGTATTACGAATAGGA 59.414 45.833 0.00 0.00 0.00 2.94
4355 4511 4.262335 GGGGAGGTGTGTATTACGAATAGG 60.262 50.000 0.00 0.00 0.00 2.57
4356 4512 4.587684 AGGGGAGGTGTGTATTACGAATAG 59.412 45.833 0.00 0.00 0.00 1.73
4357 4513 4.342951 CAGGGGAGGTGTGTATTACGAATA 59.657 45.833 0.00 0.00 0.00 1.75
4358 4514 3.134081 CAGGGGAGGTGTGTATTACGAAT 59.866 47.826 0.00 0.00 0.00 3.34
4359 4515 2.498481 CAGGGGAGGTGTGTATTACGAA 59.502 50.000 0.00 0.00 0.00 3.85
4360 4516 2.104967 CAGGGGAGGTGTGTATTACGA 58.895 52.381 0.00 0.00 0.00 3.43
4361 4517 1.138266 CCAGGGGAGGTGTGTATTACG 59.862 57.143 0.00 0.00 0.00 3.18
4362 4518 2.169978 GACCAGGGGAGGTGTGTATTAC 59.830 54.545 0.00 0.00 43.38 1.89
4363 4519 2.474112 GACCAGGGGAGGTGTGTATTA 58.526 52.381 0.00 0.00 43.38 0.98
4364 4520 1.286248 GACCAGGGGAGGTGTGTATT 58.714 55.000 0.00 0.00 43.38 1.89
4365 4521 0.976073 CGACCAGGGGAGGTGTGTAT 60.976 60.000 0.00 0.00 43.38 2.29
4366 4522 1.608336 CGACCAGGGGAGGTGTGTA 60.608 63.158 0.00 0.00 43.38 2.90
4367 4523 2.923035 CGACCAGGGGAGGTGTGT 60.923 66.667 0.00 0.00 43.38 3.72
4368 4524 2.052047 AAACGACCAGGGGAGGTGTG 62.052 60.000 0.00 0.00 43.38 3.82
4369 4525 1.350310 AAAACGACCAGGGGAGGTGT 61.350 55.000 0.00 0.00 43.38 4.16
4370 4526 0.605589 GAAAACGACCAGGGGAGGTG 60.606 60.000 0.00 0.00 43.38 4.00
4371 4527 0.767060 AGAAAACGACCAGGGGAGGT 60.767 55.000 0.00 0.00 46.82 3.85
4372 4528 0.400594 AAGAAAACGACCAGGGGAGG 59.599 55.000 0.00 0.00 0.00 4.30
4373 4529 2.152016 GAAAGAAAACGACCAGGGGAG 58.848 52.381 0.00 0.00 0.00 4.30
4374 4530 1.202842 GGAAAGAAAACGACCAGGGGA 60.203 52.381 0.00 0.00 0.00 4.81
4375 4531 1.244816 GGAAAGAAAACGACCAGGGG 58.755 55.000 0.00 0.00 0.00 4.79
4376 4532 0.872388 CGGAAAGAAAACGACCAGGG 59.128 55.000 0.00 0.00 0.00 4.45
4377 4533 0.872388 CCGGAAAGAAAACGACCAGG 59.128 55.000 0.00 0.00 0.00 4.45
4378 4534 0.872388 CCCGGAAAGAAAACGACCAG 59.128 55.000 0.73 0.00 0.00 4.00
4379 4535 0.180878 ACCCGGAAAGAAAACGACCA 59.819 50.000 0.73 0.00 0.00 4.02
4380 4536 0.589708 CACCCGGAAAGAAAACGACC 59.410 55.000 0.73 0.00 0.00 4.79
4381 4537 0.589708 CCACCCGGAAAGAAAACGAC 59.410 55.000 0.73 0.00 0.00 4.34
4382 4538 0.469070 TCCACCCGGAAAGAAAACGA 59.531 50.000 0.73 0.00 38.83 3.85
4383 4539 3.009612 TCCACCCGGAAAGAAAACG 57.990 52.632 0.73 0.00 38.83 3.60
4423 4579 8.443160 CGAAGCAGAAGTGAATTTACAAATCTA 58.557 33.333 2.93 0.00 0.00 1.98
4424 4580 7.173218 TCGAAGCAGAAGTGAATTTACAAATCT 59.827 33.333 2.93 1.06 0.00 2.40
4425 4581 7.298122 TCGAAGCAGAAGTGAATTTACAAATC 58.702 34.615 2.93 0.00 0.00 2.17
4426 4582 7.202016 TCGAAGCAGAAGTGAATTTACAAAT 57.798 32.000 2.93 0.00 0.00 2.32
4427 4583 6.612247 TCGAAGCAGAAGTGAATTTACAAA 57.388 33.333 2.93 0.00 0.00 2.83
4428 4584 6.801539 ATCGAAGCAGAAGTGAATTTACAA 57.198 33.333 2.93 0.00 0.00 2.41
4429 4585 9.031360 GTATATCGAAGCAGAAGTGAATTTACA 57.969 33.333 2.93 0.00 0.00 2.41
4430 4586 8.488764 GGTATATCGAAGCAGAAGTGAATTTAC 58.511 37.037 0.00 0.00 0.00 2.01
4431 4587 7.656137 GGGTATATCGAAGCAGAAGTGAATTTA 59.344 37.037 0.00 0.00 0.00 1.40
4432 4588 6.483640 GGGTATATCGAAGCAGAAGTGAATTT 59.516 38.462 0.00 0.00 0.00 1.82
4433 4589 5.992217 GGGTATATCGAAGCAGAAGTGAATT 59.008 40.000 0.00 0.00 0.00 2.17
4434 4590 5.511545 GGGGTATATCGAAGCAGAAGTGAAT 60.512 44.000 0.00 0.00 0.00 2.57
4435 4591 4.202223 GGGGTATATCGAAGCAGAAGTGAA 60.202 45.833 0.00 0.00 0.00 3.18
4436 4592 3.321111 GGGGTATATCGAAGCAGAAGTGA 59.679 47.826 0.00 0.00 0.00 3.41
4437 4593 3.555168 GGGGGTATATCGAAGCAGAAGTG 60.555 52.174 0.00 0.00 0.00 3.16
4438 4594 2.633481 GGGGGTATATCGAAGCAGAAGT 59.367 50.000 0.00 0.00 0.00 3.01
4439 4595 3.320673 GGGGGTATATCGAAGCAGAAG 57.679 52.381 0.00 0.00 0.00 2.85
4456 4612 1.029947 GCCGTCAATGTGTTAGGGGG 61.030 60.000 0.00 0.00 0.00 5.40
4457 4613 1.029947 GGCCGTCAATGTGTTAGGGG 61.030 60.000 0.00 0.00 0.00 4.79
4458 4614 1.366111 CGGCCGTCAATGTGTTAGGG 61.366 60.000 19.50 0.00 0.00 3.53
4459 4615 0.390603 TCGGCCGTCAATGTGTTAGG 60.391 55.000 27.15 0.00 0.00 2.69
4460 4616 0.999406 CTCGGCCGTCAATGTGTTAG 59.001 55.000 27.15 6.93 0.00 2.34
4461 4617 0.604073 TCTCGGCCGTCAATGTGTTA 59.396 50.000 27.15 0.00 0.00 2.41
4462 4618 0.036388 ATCTCGGCCGTCAATGTGTT 60.036 50.000 27.15 0.00 0.00 3.32
4463 4619 0.036388 AATCTCGGCCGTCAATGTGT 60.036 50.000 27.15 0.35 0.00 3.72
4464 4620 1.593006 GTAATCTCGGCCGTCAATGTG 59.407 52.381 27.15 7.84 0.00 3.21
4465 4621 1.472728 GGTAATCTCGGCCGTCAATGT 60.473 52.381 27.15 9.44 0.00 2.71
4466 4622 1.217882 GGTAATCTCGGCCGTCAATG 58.782 55.000 27.15 11.38 0.00 2.82
4467 4623 0.106149 GGGTAATCTCGGCCGTCAAT 59.894 55.000 27.15 14.17 0.00 2.57
4468 4624 0.974010 AGGGTAATCTCGGCCGTCAA 60.974 55.000 27.15 12.30 0.00 3.18
4469 4625 1.380785 AGGGTAATCTCGGCCGTCA 60.381 57.895 27.15 13.52 0.00 4.35
4470 4626 1.067582 CAGGGTAATCTCGGCCGTC 59.932 63.158 27.15 9.53 0.00 4.79
4471 4627 0.396139 TACAGGGTAATCTCGGCCGT 60.396 55.000 27.15 8.36 0.00 5.68
4472 4628 0.031721 GTACAGGGTAATCTCGGCCG 59.968 60.000 22.12 22.12 0.00 6.13
4473 4629 0.391966 GGTACAGGGTAATCTCGGCC 59.608 60.000 0.00 0.00 0.00 6.13
4474 4630 0.391966 GGGTACAGGGTAATCTCGGC 59.608 60.000 0.00 0.00 0.00 5.54
4475 4631 1.046204 GGGGTACAGGGTAATCTCGG 58.954 60.000 0.00 0.00 0.00 4.63
4476 4632 2.083628 AGGGGTACAGGGTAATCTCG 57.916 55.000 0.00 0.00 0.00 4.04
4477 4633 3.381335 TGAAGGGGTACAGGGTAATCTC 58.619 50.000 0.00 0.00 0.00 2.75
4478 4634 3.502051 TGAAGGGGTACAGGGTAATCT 57.498 47.619 0.00 0.00 0.00 2.40
4479 4635 5.899631 TTATGAAGGGGTACAGGGTAATC 57.100 43.478 0.00 0.00 0.00 1.75
4480 4636 7.957929 TTATTATGAAGGGGTACAGGGTAAT 57.042 36.000 0.00 0.00 0.00 1.89
4481 4637 7.147266 CCTTTATTATGAAGGGGTACAGGGTAA 60.147 40.741 7.77 0.00 39.99 2.85
4482 4638 6.330778 CCTTTATTATGAAGGGGTACAGGGTA 59.669 42.308 7.77 0.00 39.99 3.69
4483 4639 5.133830 CCTTTATTATGAAGGGGTACAGGGT 59.866 44.000 7.77 0.00 39.99 4.34
4484 4640 5.631119 CCTTTATTATGAAGGGGTACAGGG 58.369 45.833 7.77 0.00 39.99 4.45
4493 4649 5.186409 CCATCATGCCCCTTTATTATGAAGG 59.814 44.000 8.60 8.60 42.68 3.46
4494 4650 5.776716 ACCATCATGCCCCTTTATTATGAAG 59.223 40.000 0.00 0.00 32.21 3.02
4495 4651 5.714863 ACCATCATGCCCCTTTATTATGAA 58.285 37.500 0.00 0.00 32.21 2.57
4496 4652 5.074929 AGACCATCATGCCCCTTTATTATGA 59.925 40.000 0.00 0.00 32.90 2.15
4497 4653 5.327732 AGACCATCATGCCCCTTTATTATG 58.672 41.667 0.00 0.00 0.00 1.90
4498 4654 5.605540 AGACCATCATGCCCCTTTATTAT 57.394 39.130 0.00 0.00 0.00 1.28
4499 4655 5.402054 AAGACCATCATGCCCCTTTATTA 57.598 39.130 0.00 0.00 0.00 0.98
4500 4656 3.979501 AGACCATCATGCCCCTTTATT 57.020 42.857 0.00 0.00 0.00 1.40
4501 4657 3.979501 AAGACCATCATGCCCCTTTAT 57.020 42.857 0.00 0.00 0.00 1.40
4502 4658 3.756082 AAAGACCATCATGCCCCTTTA 57.244 42.857 0.00 0.00 0.00 1.85
4503 4659 2.629017 AAAGACCATCATGCCCCTTT 57.371 45.000 0.00 0.00 0.00 3.11
4504 4660 2.629017 AAAAGACCATCATGCCCCTT 57.371 45.000 0.00 0.00 0.00 3.95
4505 4661 2.629017 AAAAAGACCATCATGCCCCT 57.371 45.000 0.00 0.00 0.00 4.79
4533 4689 7.097128 CCTTTTCTCTGTATATTTACGTCGACG 60.097 40.741 34.58 34.58 46.33 5.12
4534 4690 7.167136 CCCTTTTCTCTGTATATTTACGTCGAC 59.833 40.741 5.18 5.18 0.00 4.20
4535 4691 7.067372 TCCCTTTTCTCTGTATATTTACGTCGA 59.933 37.037 0.00 0.00 0.00 4.20
4536 4692 7.198390 TCCCTTTTCTCTGTATATTTACGTCG 58.802 38.462 0.00 0.00 0.00 5.12
4537 4693 8.937634 TTCCCTTTTCTCTGTATATTTACGTC 57.062 34.615 0.00 0.00 0.00 4.34
4538 4694 9.379791 CTTTCCCTTTTCTCTGTATATTTACGT 57.620 33.333 0.00 0.00 0.00 3.57
4539 4695 8.336080 GCTTTCCCTTTTCTCTGTATATTTACG 58.664 37.037 0.00 0.00 0.00 3.18
4540 4696 9.397280 AGCTTTCCCTTTTCTCTGTATATTTAC 57.603 33.333 0.00 0.00 0.00 2.01
4541 4697 9.614792 GAGCTTTCCCTTTTCTCTGTATATTTA 57.385 33.333 0.00 0.00 0.00 1.40
4542 4698 8.109634 TGAGCTTTCCCTTTTCTCTGTATATTT 58.890 33.333 0.00 0.00 0.00 1.40
4543 4699 7.554476 GTGAGCTTTCCCTTTTCTCTGTATATT 59.446 37.037 0.00 0.00 0.00 1.28
4544 4700 7.051000 GTGAGCTTTCCCTTTTCTCTGTATAT 58.949 38.462 0.00 0.00 0.00 0.86
4545 4701 6.407202 GTGAGCTTTCCCTTTTCTCTGTATA 58.593 40.000 0.00 0.00 0.00 1.47
4557 4713 1.283321 GAATCCTGGTGAGCTTTCCCT 59.717 52.381 5.82 0.00 0.00 4.20
4561 4717 3.823304 GAGTTTGAATCCTGGTGAGCTTT 59.177 43.478 0.00 0.00 0.00 3.51
4562 4718 3.181440 TGAGTTTGAATCCTGGTGAGCTT 60.181 43.478 0.00 0.00 0.00 3.74
4570 4726 3.681897 CGAGGTCTTGAGTTTGAATCCTG 59.318 47.826 0.00 0.00 0.00 3.86
4580 4736 3.555168 CCTTTAAGTGCGAGGTCTTGAGT 60.555 47.826 0.00 0.00 0.00 3.41
4609 4765 3.253677 CGGTGGGATCAAGTAGCTAGTAG 59.746 52.174 0.35 0.00 0.00 2.57
4617 4773 1.220749 GCAGCGGTGGGATCAAGTA 59.779 57.895 17.54 0.00 0.00 2.24
4624 4780 3.390521 CCACTAGCAGCGGTGGGA 61.391 66.667 24.21 0.00 46.47 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.