Multiple sequence alignment - TraesCS5D01G430400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G430400 chr5D 100.000 4474 0 0 1 4474 487837679 487833206 0.000000e+00 8263.0
1 TraesCS5D01G430400 chr5D 92.364 1100 75 4 790 1889 487599976 487598886 0.000000e+00 1557.0
2 TraesCS5D01G430400 chr5D 94.118 136 8 0 3328 3463 487598569 487598434 1.630000e-49 207.0
3 TraesCS5D01G430400 chr5D 79.668 241 21 17 1886 2102 487598859 487598623 1.000000e-31 148.0
4 TraesCS5D01G430400 chr5D 77.692 260 43 13 4214 4463 382057197 382057451 1.300000e-30 145.0
5 TraesCS5D01G430400 chr5D 100.000 28 0 0 671 698 78162150 78162177 8.000000e-03 52.8
6 TraesCS5D01G430400 chr5A 93.944 1321 71 6 792 2112 608447796 608446485 0.000000e+00 1988.0
7 TraesCS5D01G430400 chr5A 90.727 1100 93 4 790 1889 608361852 608360762 0.000000e+00 1458.0
8 TraesCS5D01G430400 chr5A 83.478 690 97 12 3797 4474 608445455 608444771 1.060000e-175 627.0
9 TraesCS5D01G430400 chr5A 89.677 310 18 4 3264 3572 608446167 608445871 2.520000e-102 383.0
10 TraesCS5D01G430400 chr5A 94.776 134 7 0 3328 3461 608360442 608360309 4.530000e-50 209.0
11 TraesCS5D01G430400 chr5A 78.423 241 27 14 1886 2102 608360735 608360496 2.810000e-27 134.0
12 TraesCS5D01G430400 chr5A 78.610 187 32 4 1 180 536877804 536877989 2.830000e-22 117.0
13 TraesCS5D01G430400 chr5B 91.983 1185 92 2 764 1945 600338666 600337482 0.000000e+00 1659.0
14 TraesCS5D01G430400 chr5B 92.000 1100 78 5 790 1889 600135259 600134170 0.000000e+00 1535.0
15 TraesCS5D01G430400 chr5B 83.974 755 74 21 12 744 600339447 600338718 0.000000e+00 680.0
16 TraesCS5D01G430400 chr5B 93.768 353 18 2 3290 3642 600337293 600336945 1.100000e-145 527.0
17 TraesCS5D01G430400 chr5B 95.745 141 5 1 3328 3467 600133845 600133705 4.500000e-55 226.0
18 TraesCS5D01G430400 chr5B 85.475 179 19 3 5 177 499161388 499161565 3.560000e-41 180.0
19 TraesCS5D01G430400 chr5B 94.783 115 6 0 1988 2102 600337402 600337288 3.560000e-41 180.0
20 TraesCS5D01G430400 chr5B 79.012 243 21 17 1886 2102 600134140 600133902 6.030000e-29 139.0
21 TraesCS5D01G430400 chr5B 83.117 77 7 6 623 697 395679460 395679388 1.040000e-06 65.8
22 TraesCS5D01G430400 chr5B 94.595 37 2 0 465 501 406278436 406278472 1.740000e-04 58.4
23 TraesCS5D01G430400 chr6D 93.456 1085 64 5 2179 3262 147887409 147888487 0.000000e+00 1604.0
24 TraesCS5D01G430400 chr4D 93.476 1073 67 3 2181 3252 77231417 77232487 0.000000e+00 1591.0
25 TraesCS5D01G430400 chr2D 93.364 1070 61 10 2188 3252 276936741 276935677 0.000000e+00 1574.0
26 TraesCS5D01G430400 chr2D 92.844 1076 66 11 2181 3252 285349014 285350082 0.000000e+00 1550.0
27 TraesCS5D01G430400 chr2D 77.652 264 46 11 4208 4462 642039415 642039156 1.000000e-31 148.0
28 TraesCS5D01G430400 chr7D 92.456 1087 68 11 2188 3270 598310743 598309667 0.000000e+00 1541.0
29 TraesCS5D01G430400 chr7D 92.579 1078 69 11 2181 3252 145920048 145918976 0.000000e+00 1537.0
30 TraesCS5D01G430400 chr7D 92.379 1076 68 10 2181 3252 576645031 576643966 0.000000e+00 1520.0
31 TraesCS5D01G430400 chr7D 74.934 379 73 19 4093 4461 632841079 632841445 2.160000e-33 154.0
32 TraesCS5D01G430400 chr7D 73.469 392 81 14 3743 4122 446304268 446303888 4.700000e-25 126.0
33 TraesCS5D01G430400 chr6B 92.088 1087 73 12 2173 3257 626810250 626809175 0.000000e+00 1519.0
34 TraesCS5D01G430400 chr6B 77.586 232 39 10 4235 4461 716904911 716905134 1.310000e-25 128.0
35 TraesCS5D01G430400 chr6B 72.000 350 82 13 3747 4086 19326468 19326811 6.160000e-14 89.8
36 TraesCS5D01G430400 chr1D 92.208 1078 76 7 2181 3257 6038358 6039428 0.000000e+00 1519.0
37 TraesCS5D01G430400 chr4A 84.181 177 22 5 6 180 146704894 146705066 2.770000e-37 167.0
38 TraesCS5D01G430400 chr7B 73.933 445 90 24 4022 4450 71664642 71665076 5.990000e-34 156.0
39 TraesCS5D01G430400 chr7A 77.154 267 50 9 4209 4467 717141641 717141904 1.300000e-30 145.0
40 TraesCS5D01G430400 chr3B 76.806 263 51 9 4212 4467 803577206 803576947 6.030000e-29 139.0
41 TraesCS5D01G430400 chr2A 82.530 166 19 7 5 161 31199133 31198969 2.170000e-28 137.0
42 TraesCS5D01G430400 chrUn 84.173 139 21 1 4330 4467 50097712 50097574 2.810000e-27 134.0
43 TraesCS5D01G430400 chr4B 78.488 172 27 7 17 180 527673417 527673248 2.200000e-18 104.0
44 TraesCS5D01G430400 chr2B 76.168 214 40 8 4021 4227 18315322 18315113 7.920000e-18 102.0
45 TraesCS5D01G430400 chr2B 97.059 34 1 0 468 501 316533077 316533044 1.740000e-04 58.4
46 TraesCS5D01G430400 chr3D 84.211 95 11 3 4181 4271 324307523 324307617 6.160000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G430400 chr5D 487833206 487837679 4473 True 8263.000000 8263 100.000000 1 4474 1 chr5D.!!$R1 4473
1 TraesCS5D01G430400 chr5D 487598434 487599976 1542 True 637.333333 1557 88.716667 790 3463 3 chr5D.!!$R2 2673
2 TraesCS5D01G430400 chr5A 608444771 608447796 3025 True 999.333333 1988 89.033000 792 4474 3 chr5A.!!$R2 3682
3 TraesCS5D01G430400 chr5A 608360309 608361852 1543 True 600.333333 1458 87.975333 790 3461 3 chr5A.!!$R1 2671
4 TraesCS5D01G430400 chr5B 600336945 600339447 2502 True 761.500000 1659 91.127000 12 3642 4 chr5B.!!$R3 3630
5 TraesCS5D01G430400 chr5B 600133705 600135259 1554 True 633.333333 1535 88.919000 790 3467 3 chr5B.!!$R2 2677
6 TraesCS5D01G430400 chr6D 147887409 147888487 1078 False 1604.000000 1604 93.456000 2179 3262 1 chr6D.!!$F1 1083
7 TraesCS5D01G430400 chr4D 77231417 77232487 1070 False 1591.000000 1591 93.476000 2181 3252 1 chr4D.!!$F1 1071
8 TraesCS5D01G430400 chr2D 276935677 276936741 1064 True 1574.000000 1574 93.364000 2188 3252 1 chr2D.!!$R1 1064
9 TraesCS5D01G430400 chr2D 285349014 285350082 1068 False 1550.000000 1550 92.844000 2181 3252 1 chr2D.!!$F1 1071
10 TraesCS5D01G430400 chr7D 598309667 598310743 1076 True 1541.000000 1541 92.456000 2188 3270 1 chr7D.!!$R4 1082
11 TraesCS5D01G430400 chr7D 145918976 145920048 1072 True 1537.000000 1537 92.579000 2181 3252 1 chr7D.!!$R1 1071
12 TraesCS5D01G430400 chr7D 576643966 576645031 1065 True 1520.000000 1520 92.379000 2181 3252 1 chr7D.!!$R3 1071
13 TraesCS5D01G430400 chr6B 626809175 626810250 1075 True 1519.000000 1519 92.088000 2173 3257 1 chr6B.!!$R1 1084
14 TraesCS5D01G430400 chr1D 6038358 6039428 1070 False 1519.000000 1519 92.208000 2181 3257 1 chr1D.!!$F1 1076

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
158 161 0.036388 ACGACTTCCGCCAATGTGAT 60.036 50.0 0.0 0.0 43.32 3.06 F
1986 2083 0.178953 AGACCAGCCAGCCAACATTT 60.179 50.0 0.0 0.0 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2129 2637 0.490017 TAGTTGGACTGGGTCTGGGA 59.510 55.0 0.0 0.0 32.47 4.37 R
3770 4573 0.107017 ATCTTTGGATGCGGAGGTGG 60.107 55.0 0.0 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.939271 TGGAGTGCATGCATAAATTCATG 58.061 39.130 25.64 0.00 42.08 3.07
46 47 4.980434 GGAGTGCATGCATAAATTCATGAC 59.020 41.667 25.64 6.01 41.82 3.06
67 69 2.684374 CGAAATCACATTGATGGAGGCA 59.316 45.455 0.00 0.00 37.15 4.75
140 143 6.391227 TTTGAGTTCTGATTTTTCTCCCAC 57.609 37.500 0.00 0.00 0.00 4.61
148 151 1.873698 TTTTTCTCCCACGACTTCCG 58.126 50.000 0.00 0.00 45.44 4.30
158 161 0.036388 ACGACTTCCGCCAATGTGAT 60.036 50.000 0.00 0.00 43.32 3.06
212 215 5.831997 TCTGCTTTTTGCTCTACCTTTTTC 58.168 37.500 0.00 0.00 43.37 2.29
222 227 4.626172 GCTCTACCTTTTTCCGTACTCAAG 59.374 45.833 0.00 0.00 0.00 3.02
229 234 5.390991 CCTTTTTCCGTACTCAAGATTCTGC 60.391 44.000 0.00 0.00 0.00 4.26
241 246 3.930634 AGATTCTGCTTTTTGCTCCAC 57.069 42.857 0.00 0.00 43.37 4.02
243 248 0.667993 TTCTGCTTTTTGCTCCACCG 59.332 50.000 0.00 0.00 43.37 4.94
248 253 1.335496 GCTTTTTGCTCCACCGTTACA 59.665 47.619 0.00 0.00 38.95 2.41
255 260 2.170397 TGCTCCACCGTTACATGATGAT 59.830 45.455 0.00 0.00 0.00 2.45
256 261 3.386402 TGCTCCACCGTTACATGATGATA 59.614 43.478 0.00 0.00 0.00 2.15
257 262 4.141824 TGCTCCACCGTTACATGATGATAA 60.142 41.667 0.00 0.00 0.00 1.75
259 264 5.050091 GCTCCACCGTTACATGATGATAAAG 60.050 44.000 0.00 0.00 0.00 1.85
260 265 5.984725 TCCACCGTTACATGATGATAAAGT 58.015 37.500 0.00 0.00 0.00 2.66
261 266 7.114866 TCCACCGTTACATGATGATAAAGTA 57.885 36.000 0.00 0.00 0.00 2.24
262 267 7.557724 TCCACCGTTACATGATGATAAAGTAA 58.442 34.615 0.00 0.00 0.00 2.24
263 268 7.493320 TCCACCGTTACATGATGATAAAGTAAC 59.507 37.037 0.00 0.00 40.45 2.50
270 275 7.239166 ACATGATGATAAAGTAACTTGAGCG 57.761 36.000 0.00 0.00 0.00 5.03
271 276 6.258727 ACATGATGATAAAGTAACTTGAGCGG 59.741 38.462 0.00 0.00 0.00 5.52
300 305 6.742756 AGATATATATTCCCTCCGTCTGGAA 58.257 40.000 0.00 0.00 45.87 3.53
305 310 6.704056 ATATTCCCTCCGTCTGGAATTATT 57.296 37.500 12.89 0.45 46.68 1.40
326 331 3.825908 AGACCCCTTTATTTTGAGCCA 57.174 42.857 0.00 0.00 0.00 4.75
327 332 4.126520 AGACCCCTTTATTTTGAGCCAA 57.873 40.909 0.00 0.00 0.00 4.52
328 333 4.488770 AGACCCCTTTATTTTGAGCCAAA 58.511 39.130 0.00 0.00 0.00 3.28
329 334 5.093677 AGACCCCTTTATTTTGAGCCAAAT 58.906 37.500 1.89 0.00 33.19 2.32
330 335 5.547666 AGACCCCTTTATTTTGAGCCAAATT 59.452 36.000 1.89 2.10 33.19 1.82
331 336 6.044287 AGACCCCTTTATTTTGAGCCAAATTT 59.956 34.615 1.89 0.00 33.19 1.82
332 337 6.609876 ACCCCTTTATTTTGAGCCAAATTTT 58.390 32.000 1.89 0.00 33.19 1.82
333 338 6.489700 ACCCCTTTATTTTGAGCCAAATTTTG 59.510 34.615 1.99 1.99 33.19 2.44
334 339 6.714356 CCCCTTTATTTTGAGCCAAATTTTGA 59.286 34.615 10.72 0.00 33.19 2.69
335 340 7.394077 CCCCTTTATTTTGAGCCAAATTTTGAT 59.606 33.333 10.72 0.00 33.19 2.57
336 341 8.453320 CCCTTTATTTTGAGCCAAATTTTGATC 58.547 33.333 10.72 8.60 33.19 2.92
337 342 9.001542 CCTTTATTTTGAGCCAAATTTTGATCA 57.998 29.630 10.72 6.14 33.19 2.92
340 345 7.989416 ATTTTGAGCCAAATTTTGATCATGT 57.011 28.000 10.59 0.00 33.19 3.21
341 346 6.788684 TTTGAGCCAAATTTTGATCATGTG 57.211 33.333 10.59 0.00 0.00 3.21
342 347 5.725325 TGAGCCAAATTTTGATCATGTGA 57.275 34.783 10.72 0.00 0.00 3.58
343 348 6.288941 TGAGCCAAATTTTGATCATGTGAT 57.711 33.333 10.72 0.00 37.51 3.06
344 349 6.703319 TGAGCCAAATTTTGATCATGTGATT 58.297 32.000 10.72 0.00 34.37 2.57
402 407 7.707624 TCATGGAAAGCTCAAATACAAATCT 57.292 32.000 0.00 0.00 0.00 2.40
470 491 4.341487 AGTTGGACCTAAAATACAAGGGC 58.659 43.478 0.00 0.00 40.53 5.19
471 492 4.083565 GTTGGACCTAAAATACAAGGGCA 58.916 43.478 0.00 0.00 43.36 5.36
488 510 2.158726 GGGCATAATAAACCCAGACGGA 60.159 50.000 0.00 0.00 43.64 4.69
490 512 3.139077 GCATAATAAACCCAGACGGAGG 58.861 50.000 0.00 0.00 34.64 4.30
510 532 6.526526 GGAGGGAGTATAAGTCAAATTCCTC 58.473 44.000 0.00 0.00 37.07 3.71
517 539 9.235537 GAGTATAAGTCAAATTCCTCGTTACTC 57.764 37.037 0.00 0.00 0.00 2.59
521 543 6.585695 AGTCAAATTCCTCGTTACTCTACA 57.414 37.500 0.00 0.00 0.00 2.74
529 551 7.545362 TTCCTCGTTACTCTACATACTGTAC 57.455 40.000 0.00 0.00 0.00 2.90
532 554 7.279536 TCCTCGTTACTCTACATACTGTACAAG 59.720 40.741 0.00 0.00 0.00 3.16
593 615 5.758296 ACATAGATGTGGTTTAGCAATACCG 59.242 40.000 0.00 0.00 40.03 4.02
599 621 6.334102 TGTGGTTTAGCAATACCGAAAAAT 57.666 33.333 0.00 0.00 37.23 1.82
600 622 6.383415 TGTGGTTTAGCAATACCGAAAAATC 58.617 36.000 0.00 0.00 37.23 2.17
604 626 6.745907 GGTTTAGCAATACCGAAAAATCTGAC 59.254 38.462 0.00 0.00 0.00 3.51
612 634 4.624015 ACCGAAAAATCTGACGTTAGACA 58.376 39.130 12.76 0.00 0.00 3.41
630 652 7.530525 CGTTAGACATTTATGTATGGCAAATCG 59.469 37.037 0.00 0.00 41.95 3.34
638 660 8.627487 TTTATGTATGGCAAATCGAATGTTTC 57.373 30.769 0.00 0.00 0.00 2.78
669 691 6.565811 GCAATTTATATTGACGCGAGGATGAA 60.566 38.462 15.93 2.11 43.12 2.57
687 709 8.907222 AGGATGAAAATTTAGTTTGCAAACAT 57.093 26.923 36.46 25.24 38.82 2.71
688 710 8.776470 AGGATGAAAATTTAGTTTGCAAACATG 58.224 29.630 36.46 0.00 38.82 3.21
700 722 5.987777 TTGCAAACATGACAATTTTCAGG 57.012 34.783 0.00 4.78 33.44 3.86
707 733 9.311916 CAAACATGACAATTTTCAGGAAAACTA 57.688 29.630 12.81 0.00 42.32 2.24
713 739 9.883142 TGACAATTTTCAGGAAAACTAAAATGT 57.117 25.926 9.19 7.95 42.32 2.71
734 760 5.753744 TGTATTTTACCGTGCTTTGTCAAG 58.246 37.500 0.00 0.00 0.00 3.02
739 765 6.380095 TTTACCGTGCTTTGTCAAGTAAAT 57.620 33.333 2.94 0.00 31.86 1.40
744 770 5.518487 CCGTGCTTTGTCAAGTAAATTTGTT 59.482 36.000 0.00 0.00 31.86 2.83
746 772 7.096640 CCGTGCTTTGTCAAGTAAATTTGTTAG 60.097 37.037 0.00 0.00 31.86 2.34
749 775 6.923508 GCTTTGTCAAGTAAATTTGTTAGCCT 59.076 34.615 0.00 0.00 31.86 4.58
750 776 7.114953 GCTTTGTCAAGTAAATTTGTTAGCCTC 59.885 37.037 0.00 0.00 31.86 4.70
751 777 6.236017 TGTCAAGTAAATTTGTTAGCCTCG 57.764 37.500 0.00 0.00 0.00 4.63
753 779 6.073440 TGTCAAGTAAATTTGTTAGCCTCGAC 60.073 38.462 0.00 0.00 0.00 4.20
755 781 6.483974 TCAAGTAAATTTGTTAGCCTCGACAA 59.516 34.615 0.00 0.00 34.22 3.18
757 783 6.665465 AGTAAATTTGTTAGCCTCGACAAAC 58.335 36.000 0.00 0.00 45.33 2.93
758 784 5.508200 AAATTTGTTAGCCTCGACAAACA 57.492 34.783 8.06 0.00 45.33 2.83
760 786 6.811253 AATTTGTTAGCCTCGACAAACATA 57.189 33.333 8.06 0.00 45.33 2.29
762 788 6.621316 TTTGTTAGCCTCGACAAACATAAA 57.379 33.333 3.09 0.00 39.92 1.40
766 792 6.205853 TGTTAGCCTCGACAAACATAAATTGT 59.794 34.615 0.00 0.00 43.37 2.71
767 793 5.046910 AGCCTCGACAAACATAAATTGTG 57.953 39.130 0.00 0.00 40.90 3.33
771 797 7.283127 AGCCTCGACAAACATAAATTGTGATAT 59.717 33.333 0.00 0.00 40.90 1.63
840 899 4.143333 CGGGTCGGCCGAGTCAAT 62.143 66.667 31.97 0.00 34.97 2.57
866 927 2.685380 CCCACGCCTCCTTCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
877 938 1.377333 CTTCTCCTTTCCCGCCACC 60.377 63.158 0.00 0.00 0.00 4.61
1055 1116 0.249911 GACGTGGACAAGCTCACCTT 60.250 55.000 0.00 0.00 0.00 3.50
1098 1159 1.279271 AGCAAGTTCCTGTTCGGCTAT 59.721 47.619 0.00 0.00 0.00 2.97
1149 1210 3.003113 GCCTCTTACACCGGCGTCT 62.003 63.158 6.01 0.00 33.64 4.18
1475 1536 2.657237 CGGCTGGTCTTCCTCGTT 59.343 61.111 0.00 0.00 34.23 3.85
1476 1537 1.738099 CGGCTGGTCTTCCTCGTTG 60.738 63.158 0.00 0.00 34.23 4.10
1665 1726 3.338126 CTACGACTTCCGCCTGCGT 62.338 63.158 10.94 0.00 43.32 5.24
1666 1727 1.985447 CTACGACTTCCGCCTGCGTA 61.985 60.000 10.94 0.00 43.32 4.42
1876 1937 2.037620 GCTGGTCATCTCCATCGGCT 62.038 60.000 0.00 0.00 36.84 5.52
1973 2070 6.132791 TCTACGCACTAGAATTTAGACCAG 57.867 41.667 0.00 0.00 0.00 4.00
1977 2074 3.873952 GCACTAGAATTTAGACCAGCCAG 59.126 47.826 0.00 0.00 0.00 4.85
1981 2078 2.041620 AGAATTTAGACCAGCCAGCCAA 59.958 45.455 0.00 0.00 0.00 4.52
1984 2081 0.698238 TTAGACCAGCCAGCCAACAT 59.302 50.000 0.00 0.00 0.00 2.71
1985 2082 0.698238 TAGACCAGCCAGCCAACATT 59.302 50.000 0.00 0.00 0.00 2.71
1986 2083 0.178953 AGACCAGCCAGCCAACATTT 60.179 50.000 0.00 0.00 0.00 2.32
2002 2133 5.105635 CCAACATTTGTCCTATCTTGCATGT 60.106 40.000 0.00 0.00 0.00 3.21
2102 2610 1.198759 AACTACACCCGCATCCAGGT 61.199 55.000 0.00 0.00 36.58 4.00
2103 2611 1.144057 CTACACCCGCATCCAGGTC 59.856 63.158 0.00 0.00 32.72 3.85
2105 2613 1.613317 TACACCCGCATCCAGGTCAG 61.613 60.000 0.00 0.00 32.72 3.51
2106 2614 2.607750 ACCCGCATCCAGGTCAGT 60.608 61.111 0.00 0.00 0.00 3.41
2108 2616 2.821366 CCGCATCCAGGTCAGTGC 60.821 66.667 0.00 0.00 0.00 4.40
2109 2617 2.821366 CGCATCCAGGTCAGTGCC 60.821 66.667 0.00 0.00 34.20 5.01
2110 2618 2.352422 GCATCCAGGTCAGTGCCA 59.648 61.111 6.40 0.00 0.00 4.92
2112 2620 1.377725 CATCCAGGTCAGTGCCACC 60.378 63.158 6.40 0.02 0.00 4.61
2113 2621 1.847506 ATCCAGGTCAGTGCCACCA 60.848 57.895 3.98 0.00 36.23 4.17
2126 2634 1.071071 TGCCACCACTTATATACGGCC 59.929 52.381 0.00 0.00 37.25 6.13
2128 2636 2.762745 CCACCACTTATATACGGCCAC 58.237 52.381 2.24 0.00 0.00 5.01
2129 2637 2.367567 CCACCACTTATATACGGCCACT 59.632 50.000 2.24 0.00 0.00 4.00
2131 2639 2.631545 ACCACTTATATACGGCCACTCC 59.368 50.000 2.24 0.00 0.00 3.85
2133 2641 2.631062 CACTTATATACGGCCACTCCCA 59.369 50.000 2.24 0.00 0.00 4.37
2135 2643 2.984435 TATATACGGCCACTCCCAGA 57.016 50.000 2.24 0.00 0.00 3.86
2136 2644 1.339097 ATATACGGCCACTCCCAGAC 58.661 55.000 2.24 0.00 0.00 3.51
2137 2645 0.757935 TATACGGCCACTCCCAGACC 60.758 60.000 2.24 0.00 0.00 3.85
2141 2649 2.930562 GCCACTCCCAGACCCAGT 60.931 66.667 0.00 0.00 0.00 4.00
2142 2650 2.960688 GCCACTCCCAGACCCAGTC 61.961 68.421 0.00 0.00 0.00 3.51
2143 2651 2.294078 CCACTCCCAGACCCAGTCC 61.294 68.421 0.00 0.00 32.18 3.85
2145 2653 1.127567 CACTCCCAGACCCAGTCCAA 61.128 60.000 0.00 0.00 32.18 3.53
2146 2654 1.128188 ACTCCCAGACCCAGTCCAAC 61.128 60.000 0.00 0.00 32.18 3.77
2147 2655 0.838122 CTCCCAGACCCAGTCCAACT 60.838 60.000 0.00 0.00 32.18 3.16
2148 2656 0.490017 TCCCAGACCCAGTCCAACTA 59.510 55.000 0.00 0.00 32.18 2.24
2149 2657 0.613777 CCCAGACCCAGTCCAACTAC 59.386 60.000 0.00 0.00 32.18 2.73
2151 2659 2.559026 CCCAGACCCAGTCCAACTACTA 60.559 54.545 0.00 0.00 32.18 1.82
2152 2660 2.761208 CCAGACCCAGTCCAACTACTAG 59.239 54.545 0.00 0.00 32.18 2.57
2153 2661 2.166664 CAGACCCAGTCCAACTACTAGC 59.833 54.545 0.00 0.00 32.18 3.42
2154 2662 2.043252 AGACCCAGTCCAACTACTAGCT 59.957 50.000 0.00 0.00 32.18 3.32
2155 2663 3.268856 AGACCCAGTCCAACTACTAGCTA 59.731 47.826 0.00 0.00 32.18 3.32
2156 2664 3.633065 GACCCAGTCCAACTACTAGCTAG 59.367 52.174 19.44 19.44 0.00 3.42
2157 2665 3.011482 ACCCAGTCCAACTACTAGCTAGT 59.989 47.826 28.50 28.50 37.28 2.57
2158 2666 3.381908 CCCAGTCCAACTACTAGCTAGTG 59.618 52.174 32.21 23.62 35.70 2.74
2159 2667 4.017808 CCAGTCCAACTACTAGCTAGTGT 58.982 47.826 32.21 24.19 35.70 3.55
2160 2668 4.463186 CCAGTCCAACTACTAGCTAGTGTT 59.537 45.833 32.21 27.47 35.70 3.32
2162 2670 6.404513 CCAGTCCAACTACTAGCTAGTGTTAC 60.405 46.154 32.21 24.84 35.70 2.50
2163 2671 5.651576 AGTCCAACTACTAGCTAGTGTTACC 59.348 44.000 32.21 21.26 35.70 2.85
2164 2672 4.637534 TCCAACTACTAGCTAGTGTTACCG 59.362 45.833 32.21 21.32 35.70 4.02
2165 2673 4.397417 CCAACTACTAGCTAGTGTTACCGT 59.603 45.833 32.21 17.15 35.70 4.83
2167 2675 3.868077 ACTACTAGCTAGTGTTACCGTCG 59.132 47.826 32.21 13.14 37.10 5.12
2170 2678 1.527034 AGCTAGTGTTACCGTCGTGA 58.473 50.000 0.00 0.00 0.00 4.35
2171 2679 2.089980 AGCTAGTGTTACCGTCGTGAT 58.910 47.619 0.00 0.00 0.00 3.06
2176 2959 5.220098 GCTAGTGTTACCGTCGTGATAAAAC 60.220 44.000 0.00 0.00 0.00 2.43
2183 2966 3.267483 CCGTCGTGATAAAACCTTGGAT 58.733 45.455 0.00 0.00 0.00 3.41
2186 2969 4.570772 CGTCGTGATAAAACCTTGGATGAT 59.429 41.667 0.00 0.00 0.00 2.45
2220 3003 2.140717 CGTGTGGGTGTTAAGAAGTCC 58.859 52.381 0.00 0.00 0.00 3.85
2233 3016 0.600782 GAAGTCCGCCCACACGTTTA 60.601 55.000 0.00 0.00 0.00 2.01
2247 3030 6.050454 CACACGTTTAATGTGGTGTCTAAA 57.950 37.500 19.70 0.00 43.11 1.85
2253 3036 8.626526 ACGTTTAATGTGGTGTCTAAAAGAAAT 58.373 29.630 0.00 0.00 0.00 2.17
2261 3044 5.470777 TGGTGTCTAAAAGAAATAACCCACG 59.529 40.000 0.00 0.00 0.00 4.94
2299 3082 0.250727 ACAACTAGCGCCCACACATT 60.251 50.000 2.29 0.00 0.00 2.71
2619 3410 8.861086 CATGTATGGTCTGGTCTACTATAGTTT 58.139 37.037 11.40 0.00 0.00 2.66
2663 3454 3.512724 GGTTGCCACCTACTAACACTAGA 59.487 47.826 0.00 0.00 40.44 2.43
2740 3531 4.020839 GGAGTTGCCACCTACTAACACTAA 60.021 45.833 0.00 0.00 36.34 2.24
2881 3674 0.517316 GCAACTGACATGTTCGGGTC 59.483 55.000 0.00 0.00 34.44 4.46
2985 3785 0.771127 CTTTGGGTGTGGGAGAGGAA 59.229 55.000 0.00 0.00 0.00 3.36
2998 3798 3.524648 GAGGAAACGGGCGTGTGGA 62.525 63.158 0.00 0.00 0.00 4.02
3257 4060 3.117794 GGGCGTTAGTGTTTCCAAAAAC 58.882 45.455 0.00 0.00 44.18 2.43
3262 4065 6.237790 GCGTTAGTGTTTCCAAAAACTTTTG 58.762 36.000 7.77 7.77 44.23 2.44
3263 4066 6.237790 CGTTAGTGTTTCCAAAAACTTTTGC 58.762 36.000 9.04 0.00 44.62 3.68
3264 4067 6.090223 CGTTAGTGTTTCCAAAAACTTTTGCT 59.910 34.615 9.04 3.48 44.62 3.91
3266 4069 8.927721 GTTAGTGTTTCCAAAAACTTTTGCTAA 58.072 29.630 9.04 7.51 44.62 3.09
3268 4071 7.973601 AGTGTTTCCAAAAACTTTTGCTAATG 58.026 30.769 9.04 0.00 44.62 1.90
3269 4072 7.065683 AGTGTTTCCAAAAACTTTTGCTAATGG 59.934 33.333 9.04 1.95 44.62 3.16
3270 4073 6.881602 TGTTTCCAAAAACTTTTGCTAATGGT 59.118 30.769 9.04 0.00 44.62 3.55
3271 4074 7.065204 TGTTTCCAAAAACTTTTGCTAATGGTC 59.935 33.333 9.04 0.00 44.62 4.02
3272 4075 5.285651 TCCAAAAACTTTTGCTAATGGTCG 58.714 37.500 9.04 0.00 44.62 4.79
3273 4076 5.067936 TCCAAAAACTTTTGCTAATGGTCGA 59.932 36.000 9.04 0.00 44.62 4.20
3274 4077 5.925969 CCAAAAACTTTTGCTAATGGTCGAT 59.074 36.000 9.04 0.00 44.62 3.59
3275 4078 6.128849 CCAAAAACTTTTGCTAATGGTCGATG 60.129 38.462 9.04 0.00 44.62 3.84
3276 4079 5.705609 AAACTTTTGCTAATGGTCGATGT 57.294 34.783 0.00 0.00 0.00 3.06
3277 4080 4.946784 ACTTTTGCTAATGGTCGATGTC 57.053 40.909 0.00 0.00 0.00 3.06
3278 4081 4.579869 ACTTTTGCTAATGGTCGATGTCT 58.420 39.130 0.00 0.00 0.00 3.41
3279 4082 4.393062 ACTTTTGCTAATGGTCGATGTCTG 59.607 41.667 0.00 0.00 0.00 3.51
3280 4083 3.610040 TTGCTAATGGTCGATGTCTGT 57.390 42.857 0.00 0.00 0.00 3.41
3281 4084 3.610040 TGCTAATGGTCGATGTCTGTT 57.390 42.857 0.00 0.00 0.00 3.16
3282 4085 3.261580 TGCTAATGGTCGATGTCTGTTG 58.738 45.455 0.00 0.00 0.00 3.33
3283 4086 3.056179 TGCTAATGGTCGATGTCTGTTGA 60.056 43.478 0.00 0.00 0.00 3.18
3284 4087 3.932710 GCTAATGGTCGATGTCTGTTGAA 59.067 43.478 0.00 0.00 0.00 2.69
3285 4088 4.572389 GCTAATGGTCGATGTCTGTTGAAT 59.428 41.667 0.00 0.00 0.00 2.57
3286 4089 5.065218 GCTAATGGTCGATGTCTGTTGAATT 59.935 40.000 0.00 0.00 0.00 2.17
3287 4090 5.964958 AATGGTCGATGTCTGTTGAATTT 57.035 34.783 0.00 0.00 0.00 1.82
3288 4091 5.551760 ATGGTCGATGTCTGTTGAATTTC 57.448 39.130 0.00 0.00 0.00 2.17
3289 4092 4.641396 TGGTCGATGTCTGTTGAATTTCT 58.359 39.130 0.00 0.00 0.00 2.52
3296 4099 4.327854 GTCTGTTGAATTTCTACAGGCG 57.672 45.455 28.53 13.60 45.71 5.52
3299 4102 4.870426 TCTGTTGAATTTCTACAGGCGATC 59.130 41.667 28.53 0.00 45.71 3.69
3302 4105 2.135933 GAATTTCTACAGGCGATCGGG 58.864 52.381 18.30 0.00 0.00 5.14
3423 4226 2.574955 AACGCCGAGAAGCTGGAGT 61.575 57.895 0.00 0.00 40.17 3.85
3424 4227 2.100879 AACGCCGAGAAGCTGGAGTT 62.101 55.000 4.40 4.40 42.40 3.01
3560 4363 0.839277 TGACATCATAGGGCCACTGG 59.161 55.000 6.18 0.00 0.00 4.00
3563 4366 2.438021 GACATCATAGGGCCACTGGTAA 59.562 50.000 6.18 0.00 0.00 2.85
3564 4367 2.172717 ACATCATAGGGCCACTGGTAAC 59.827 50.000 6.18 0.00 0.00 2.50
3566 4369 2.557869 TCATAGGGCCACTGGTAACTT 58.442 47.619 6.18 0.00 37.61 2.66
3675 4478 7.728847 AAAATTTTAGGCATTTTTCGAAGCT 57.271 28.000 0.37 0.00 31.09 3.74
3676 4479 6.951256 AATTTTAGGCATTTTTCGAAGCTC 57.049 33.333 7.01 0.00 0.00 4.09
3677 4480 5.446143 TTTTAGGCATTTTTCGAAGCTCA 57.554 34.783 7.01 0.00 0.00 4.26
3678 4481 2.997485 AGGCATTTTTCGAAGCTCAC 57.003 45.000 7.01 0.00 0.00 3.51
3679 4482 1.197721 AGGCATTTTTCGAAGCTCACG 59.802 47.619 7.01 6.89 0.00 4.35
3680 4483 1.069227 GGCATTTTTCGAAGCTCACGT 60.069 47.619 11.82 0.00 0.00 4.49
3681 4484 1.971962 GCATTTTTCGAAGCTCACGTG 59.028 47.619 9.94 9.94 0.00 4.49
3682 4485 1.971962 CATTTTTCGAAGCTCACGTGC 59.028 47.619 11.67 0.00 0.00 5.34
3683 4486 1.010580 TTTTTCGAAGCTCACGTGCA 58.989 45.000 11.67 0.00 34.99 4.57
3684 4487 0.303493 TTTTCGAAGCTCACGTGCAC 59.697 50.000 11.67 6.82 34.99 4.57
3685 4488 0.808060 TTTCGAAGCTCACGTGCACA 60.808 50.000 18.64 0.00 34.99 4.57
3686 4489 0.808060 TTCGAAGCTCACGTGCACAA 60.808 50.000 18.64 0.12 34.99 3.33
3687 4490 1.202568 CGAAGCTCACGTGCACAAG 59.797 57.895 18.64 11.76 34.99 3.16
3688 4491 1.571460 GAAGCTCACGTGCACAAGG 59.429 57.895 18.64 5.31 34.99 3.61
3689 4492 1.153168 AAGCTCACGTGCACAAGGT 60.153 52.632 18.64 13.15 34.99 3.50
3690 4493 1.439353 AAGCTCACGTGCACAAGGTG 61.439 55.000 18.64 16.49 44.39 4.00
3701 4504 2.507339 CACAAGGTGCGTCCAAATTT 57.493 45.000 0.75 0.00 39.02 1.82
3702 4505 2.820330 CACAAGGTGCGTCCAAATTTT 58.180 42.857 0.00 0.00 39.02 1.82
3703 4506 2.794350 CACAAGGTGCGTCCAAATTTTC 59.206 45.455 0.00 0.00 39.02 2.29
3704 4507 2.428890 ACAAGGTGCGTCCAAATTTTCA 59.571 40.909 0.00 0.00 39.02 2.69
3705 4508 3.069443 ACAAGGTGCGTCCAAATTTTCAT 59.931 39.130 0.00 0.00 39.02 2.57
3706 4509 3.302365 AGGTGCGTCCAAATTTTCATG 57.698 42.857 0.00 0.00 39.02 3.07
3707 4510 2.029110 AGGTGCGTCCAAATTTTCATGG 60.029 45.455 0.00 0.00 39.02 3.66
3708 4511 2.029470 GGTGCGTCCAAATTTTCATGGA 60.029 45.455 0.00 0.00 43.32 3.41
3709 4512 3.244976 GTGCGTCCAAATTTTCATGGAG 58.755 45.455 0.00 0.00 46.01 3.86
3710 4513 2.890311 TGCGTCCAAATTTTCATGGAGT 59.110 40.909 0.00 0.00 46.01 3.85
3711 4514 3.320541 TGCGTCCAAATTTTCATGGAGTT 59.679 39.130 0.00 0.00 46.01 3.01
3712 4515 4.202202 TGCGTCCAAATTTTCATGGAGTTT 60.202 37.500 0.00 0.00 46.01 2.66
3713 4516 4.150451 GCGTCCAAATTTTCATGGAGTTTG 59.850 41.667 0.00 6.86 46.01 2.93
3714 4517 4.150451 CGTCCAAATTTTCATGGAGTTTGC 59.850 41.667 7.92 0.00 46.01 3.68
3715 4518 4.452114 GTCCAAATTTTCATGGAGTTTGCC 59.548 41.667 7.92 0.00 46.01 4.52
3716 4519 3.752747 CCAAATTTTCATGGAGTTTGCCC 59.247 43.478 7.92 0.00 39.12 5.36
3717 4520 3.317603 AATTTTCATGGAGTTTGCCCG 57.682 42.857 0.00 0.00 0.00 6.13
3718 4521 0.965439 TTTTCATGGAGTTTGCCCGG 59.035 50.000 0.00 0.00 0.00 5.73
3719 4522 0.111446 TTTCATGGAGTTTGCCCGGA 59.889 50.000 0.73 0.00 0.00 5.14
3720 4523 0.111446 TTCATGGAGTTTGCCCGGAA 59.889 50.000 0.73 0.00 0.00 4.30
3721 4524 0.111446 TCATGGAGTTTGCCCGGAAA 59.889 50.000 0.73 0.00 0.00 3.13
3722 4525 0.965439 CATGGAGTTTGCCCGGAAAA 59.035 50.000 0.73 0.00 0.00 2.29
3723 4526 1.342819 CATGGAGTTTGCCCGGAAAAA 59.657 47.619 0.73 0.00 0.00 1.94
3745 4548 6.727824 AAAATCACGGAGTTTAGACATCTG 57.272 37.500 0.00 0.00 41.61 2.90
3746 4549 5.407407 AATCACGGAGTTTAGACATCTGT 57.593 39.130 0.00 0.00 41.61 3.41
3747 4550 4.866508 TCACGGAGTTTAGACATCTGTT 57.133 40.909 0.00 0.00 41.61 3.16
3748 4551 5.209818 TCACGGAGTTTAGACATCTGTTT 57.790 39.130 0.00 0.00 41.61 2.83
3749 4552 5.607477 TCACGGAGTTTAGACATCTGTTTT 58.393 37.500 0.00 0.00 41.61 2.43
3750 4553 6.053005 TCACGGAGTTTAGACATCTGTTTTT 58.947 36.000 0.00 0.00 41.61 1.94
3751 4554 6.202188 TCACGGAGTTTAGACATCTGTTTTTC 59.798 38.462 0.00 0.00 41.61 2.29
3752 4555 6.018262 CACGGAGTTTAGACATCTGTTTTTCA 60.018 38.462 0.00 0.00 41.61 2.69
3753 4556 6.202954 ACGGAGTTTAGACATCTGTTTTTCAG 59.797 38.462 0.00 0.00 37.78 3.02
3768 4571 7.883229 TGTTTTTCAGAAAGAAGGTTGAAAC 57.117 32.000 0.00 0.00 38.75 2.78
3769 4572 7.063426 CTGTTTTTCAGAAAGAAGGTTGAAACC 59.937 37.037 3.91 3.91 46.61 3.27
3777 4580 4.513777 GGTTGAAACCCCACCTCC 57.486 61.111 0.36 0.00 43.43 4.30
3778 4581 1.602605 GGTTGAAACCCCACCTCCG 60.603 63.158 0.36 0.00 43.43 4.63
3779 4582 2.114411 TTGAAACCCCACCTCCGC 59.886 61.111 0.00 0.00 0.00 5.54
3780 4583 2.758207 TTGAAACCCCACCTCCGCA 61.758 57.895 0.00 0.00 0.00 5.69
3781 4584 2.075355 TTGAAACCCCACCTCCGCAT 62.075 55.000 0.00 0.00 0.00 4.73
3782 4585 1.749258 GAAACCCCACCTCCGCATC 60.749 63.158 0.00 0.00 0.00 3.91
3783 4586 3.282374 AAACCCCACCTCCGCATCC 62.282 63.158 0.00 0.00 0.00 3.51
3785 4588 3.727258 CCCCACCTCCGCATCCAA 61.727 66.667 0.00 0.00 0.00 3.53
3786 4589 2.354729 CCCACCTCCGCATCCAAA 59.645 61.111 0.00 0.00 0.00 3.28
3787 4590 1.750399 CCCACCTCCGCATCCAAAG 60.750 63.158 0.00 0.00 0.00 2.77
3788 4591 1.299648 CCACCTCCGCATCCAAAGA 59.700 57.895 0.00 0.00 0.00 2.52
3789 4592 0.107017 CCACCTCCGCATCCAAAGAT 60.107 55.000 0.00 0.00 0.00 2.40
3790 4593 1.140852 CCACCTCCGCATCCAAAGATA 59.859 52.381 0.00 0.00 0.00 1.98
3791 4594 2.213499 CACCTCCGCATCCAAAGATAC 58.787 52.381 0.00 0.00 0.00 2.24
3792 4595 1.837439 ACCTCCGCATCCAAAGATACA 59.163 47.619 0.00 0.00 0.00 2.29
3793 4596 2.213499 CCTCCGCATCCAAAGATACAC 58.787 52.381 0.00 0.00 0.00 2.90
3794 4597 2.419990 CCTCCGCATCCAAAGATACACA 60.420 50.000 0.00 0.00 0.00 3.72
3795 4598 3.270027 CTCCGCATCCAAAGATACACAA 58.730 45.455 0.00 0.00 0.00 3.33
3799 4602 4.437390 CCGCATCCAAAGATACACAAAGTC 60.437 45.833 0.00 0.00 0.00 3.01
3868 4671 3.769739 AAATTCAAAGCCACCTTTCCC 57.230 42.857 0.00 0.00 39.20 3.97
3869 4672 1.256812 ATTCAAAGCCACCTTTCCCG 58.743 50.000 0.00 0.00 39.20 5.14
3873 4676 1.463553 AAAGCCACCTTTCCCGCAAG 61.464 55.000 0.00 0.00 36.59 4.01
3876 4679 2.335712 CCACCTTTCCCGCAAGCTC 61.336 63.158 0.00 0.00 0.00 4.09
3878 4681 1.302832 ACCTTTCCCGCAAGCTCTG 60.303 57.895 0.00 0.00 0.00 3.35
3898 4701 3.064207 TGTCGCTACACCTAAAAGCTTG 58.936 45.455 0.00 0.00 34.03 4.01
3908 4711 2.557924 CCTAAAAGCTTGGTGATGTGCA 59.442 45.455 0.00 0.00 0.00 4.57
3917 4720 3.441244 GTGATGTGCACCGATCTCA 57.559 52.632 15.69 6.71 41.78 3.27
3919 4722 0.607620 TGATGTGCACCGATCTCACA 59.392 50.000 15.69 8.62 43.72 3.58
3921 4724 0.391661 ATGTGCACCGATCTCACACC 60.392 55.000 15.69 0.00 42.59 4.16
3922 4725 1.005037 GTGCACCGATCTCACACCA 60.005 57.895 5.22 0.00 0.00 4.17
3924 4727 0.602638 TGCACCGATCTCACACCAAC 60.603 55.000 0.00 0.00 0.00 3.77
3925 4728 0.602638 GCACCGATCTCACACCAACA 60.603 55.000 0.00 0.00 0.00 3.33
3926 4729 1.148310 CACCGATCTCACACCAACAC 58.852 55.000 0.00 0.00 0.00 3.32
3928 4731 1.347707 ACCGATCTCACACCAACACAT 59.652 47.619 0.00 0.00 0.00 3.21
3931 4739 2.930040 CGATCTCACACCAACACATACC 59.070 50.000 0.00 0.00 0.00 2.73
3946 4754 1.617357 CATACCTCTAACCGGTAGCCC 59.383 57.143 8.00 0.00 40.14 5.19
3985 4793 4.301505 GCCAAGAGCATCAACCGA 57.698 55.556 0.00 0.00 42.97 4.69
3990 4798 3.797039 CCAAGAGCATCAACCGATCTAA 58.203 45.455 0.00 0.00 37.82 2.10
3993 4801 4.471904 AGAGCATCAACCGATCTAACAA 57.528 40.909 0.00 0.00 37.82 2.83
3995 4803 4.631813 AGAGCATCAACCGATCTAACAAAC 59.368 41.667 0.00 0.00 37.82 2.93
4000 4808 5.486735 TCAACCGATCTAACAAACCCTTA 57.513 39.130 0.00 0.00 0.00 2.69
4002 4810 4.482952 ACCGATCTAACAAACCCTTAGG 57.517 45.455 0.00 0.00 40.04 2.69
4003 4811 3.203716 CCGATCTAACAAACCCTTAGGC 58.796 50.000 0.00 0.00 36.11 3.93
4004 4812 3.370103 CCGATCTAACAAACCCTTAGGCA 60.370 47.826 0.00 0.00 36.11 4.75
4005 4813 4.258543 CGATCTAACAAACCCTTAGGCAA 58.741 43.478 0.00 0.00 36.11 4.52
4006 4814 4.698304 CGATCTAACAAACCCTTAGGCAAA 59.302 41.667 0.00 0.00 36.11 3.68
4007 4815 5.391629 CGATCTAACAAACCCTTAGGCAAAC 60.392 44.000 0.00 0.00 36.11 2.93
4008 4816 4.146564 TCTAACAAACCCTTAGGCAAACC 58.853 43.478 0.00 0.00 36.11 3.27
4018 4828 1.921982 TAGGCAAACCACATGCACAT 58.078 45.000 0.00 0.00 45.60 3.21
4031 4841 4.683320 CACATGCACATACTCTAGAATCCG 59.317 45.833 0.00 0.00 0.00 4.18
4033 4843 2.693074 TGCACATACTCTAGAATCCGCA 59.307 45.455 0.00 0.00 0.00 5.69
4034 4844 3.321968 TGCACATACTCTAGAATCCGCAT 59.678 43.478 0.00 0.00 0.00 4.73
4037 4847 4.021981 CACATACTCTAGAATCCGCATCCA 60.022 45.833 0.00 0.00 0.00 3.41
4043 4853 2.124736 AATCCGCATCCACCACCG 60.125 61.111 0.00 0.00 0.00 4.94
4047 4857 4.386951 CGCATCCACCACCGTCCA 62.387 66.667 0.00 0.00 0.00 4.02
4057 4867 1.153168 CACCGTCCACCATCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
4060 4870 0.255890 CCGTCCACCATCCCATCTTT 59.744 55.000 0.00 0.00 0.00 2.52
4101 4911 1.077787 TTGCTAATCCCACCTGCCG 60.078 57.895 0.00 0.00 0.00 5.69
4114 4924 4.595538 TGCCGTCGACACCACCAC 62.596 66.667 17.16 0.00 0.00 4.16
4127 4937 1.632046 CCACCACGACGCCATACAAC 61.632 60.000 0.00 0.00 0.00 3.32
4128 4938 0.946700 CACCACGACGCCATACAACA 60.947 55.000 0.00 0.00 0.00 3.33
4129 4939 0.947180 ACCACGACGCCATACAACAC 60.947 55.000 0.00 0.00 0.00 3.32
4130 4940 1.632046 CCACGACGCCATACAACACC 61.632 60.000 0.00 0.00 0.00 4.16
4131 4941 0.946700 CACGACGCCATACAACACCA 60.947 55.000 0.00 0.00 0.00 4.17
4138 4948 0.404040 CCATACAACACCACCACCCT 59.596 55.000 0.00 0.00 0.00 4.34
4157 4967 2.738139 CGCACGTCTCCACATGCA 60.738 61.111 0.00 0.00 37.97 3.96
4159 4969 1.638388 CGCACGTCTCCACATGCATT 61.638 55.000 0.00 0.00 37.97 3.56
4160 4970 0.179181 GCACGTCTCCACATGCATTG 60.179 55.000 0.00 0.00 38.00 2.82
4163 4973 2.421073 CACGTCTCCACATGCATTGATT 59.579 45.455 0.00 0.00 0.00 2.57
4176 4986 2.569059 CATTGATTGCCGAGACTCCAT 58.431 47.619 0.00 0.00 0.00 3.41
4183 4993 2.710902 CCGAGACTCCATCGTGCCA 61.711 63.158 0.00 0.00 38.50 4.92
4184 4994 1.517257 CGAGACTCCATCGTGCCAC 60.517 63.158 0.00 0.00 35.48 5.01
4210 5021 3.285371 GACCCTGGTCGTCGATGT 58.715 61.111 4.21 0.00 35.30 3.06
4226 5037 1.665679 GATGTGGTAGATGCAACACCG 59.334 52.381 9.42 0.00 34.94 4.94
4245 5056 1.741732 CGCATCAACTCTTCCCTCCAG 60.742 57.143 0.00 0.00 0.00 3.86
4250 5061 0.474660 AACTCTTCCCTCCAGCCAGT 60.475 55.000 0.00 0.00 0.00 4.00
4255 5066 0.909610 TTCCCTCCAGCCAGTACCAG 60.910 60.000 0.00 0.00 0.00 4.00
4257 5068 1.992277 CCTCCAGCCAGTACCAGCT 60.992 63.158 1.46 1.46 40.89 4.24
4264 5075 0.881796 GCCAGTACCAGCTCCAAAAC 59.118 55.000 0.00 0.00 0.00 2.43
4271 5082 0.962356 CCAGCTCCAAAACGATGCCT 60.962 55.000 0.00 0.00 0.00 4.75
4294 5105 3.615592 CGAAGAGGGACAACGATACCAAA 60.616 47.826 0.00 0.00 0.00 3.28
4295 5106 4.320870 GAAGAGGGACAACGATACCAAAA 58.679 43.478 0.00 0.00 0.00 2.44
4298 5109 2.156098 GGGACAACGATACCAAAAGCA 58.844 47.619 0.00 0.00 0.00 3.91
4318 5129 3.741029 CGACATCATCGTCAAGGGT 57.259 52.632 0.00 0.00 46.25 4.34
4319 5130 1.560923 CGACATCATCGTCAAGGGTC 58.439 55.000 0.00 0.00 46.25 4.46
4320 5131 1.135139 CGACATCATCGTCAAGGGTCT 59.865 52.381 0.00 0.00 46.25 3.85
4321 5132 2.796383 CGACATCATCGTCAAGGGTCTC 60.796 54.545 0.00 0.00 46.25 3.36
4322 5133 2.166459 GACATCATCGTCAAGGGTCTCA 59.834 50.000 0.00 0.00 35.88 3.27
4325 5137 1.967779 TCATCGTCAAGGGTCTCACAA 59.032 47.619 0.00 0.00 0.00 3.33
4328 5140 2.766313 TCGTCAAGGGTCTCACAAATG 58.234 47.619 0.00 0.00 0.00 2.32
4337 5149 3.756963 GGGTCTCACAAATGTAGGGTTTC 59.243 47.826 0.00 0.00 0.00 2.78
4349 5161 4.426313 GGTTTCCCCCGGAGCTGG 62.426 72.222 0.73 0.00 31.21 4.85
4363 5175 2.360852 CTGGCTGAGCAAGGTGGG 60.361 66.667 6.82 0.00 0.00 4.61
4364 5176 4.666253 TGGCTGAGCAAGGTGGGC 62.666 66.667 6.82 0.00 0.00 5.36
4437 5250 1.520564 TCCGCCATGACCGAATTCG 60.521 57.895 20.92 20.92 39.44 3.34
4452 5265 2.849880 ATTCGGCATGATTTTCACCG 57.150 45.000 0.00 0.00 37.37 4.94
4458 5271 2.620242 GCATGATTTTCACCGGCATTT 58.380 42.857 0.00 0.00 0.00 2.32
4463 5276 2.081425 TTTTCACCGGCATTTGCGCT 62.081 50.000 9.73 0.00 43.26 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.262048 TCCAAACATTCCTTAAAGTTTGTCAC 58.738 34.615 14.25 0.00 45.59 3.67
1 2 7.123547 ACTCCAAACATTCCTTAAAGTTTGTCA 59.876 33.333 14.25 4.20 45.59 3.58
2 3 7.435192 CACTCCAAACATTCCTTAAAGTTTGTC 59.565 37.037 14.25 0.00 45.59 3.18
3 4 7.264947 CACTCCAAACATTCCTTAAAGTTTGT 58.735 34.615 14.25 0.00 45.59 2.83
4 5 6.200854 GCACTCCAAACATTCCTTAAAGTTTG 59.799 38.462 10.43 10.43 46.23 2.93
5 6 6.127196 TGCACTCCAAACATTCCTTAAAGTTT 60.127 34.615 0.00 0.00 34.78 2.66
6 7 5.362430 TGCACTCCAAACATTCCTTAAAGTT 59.638 36.000 0.00 0.00 0.00 2.66
7 8 4.892934 TGCACTCCAAACATTCCTTAAAGT 59.107 37.500 0.00 0.00 0.00 2.66
8 9 5.452078 TGCACTCCAAACATTCCTTAAAG 57.548 39.130 0.00 0.00 0.00 1.85
9 10 5.782047 CATGCACTCCAAACATTCCTTAAA 58.218 37.500 0.00 0.00 0.00 1.52
10 11 4.321899 GCATGCACTCCAAACATTCCTTAA 60.322 41.667 14.21 0.00 0.00 1.85
11 12 3.193267 GCATGCACTCCAAACATTCCTTA 59.807 43.478 14.21 0.00 0.00 2.69
12 13 2.028748 GCATGCACTCCAAACATTCCTT 60.029 45.455 14.21 0.00 0.00 3.36
13 14 1.547372 GCATGCACTCCAAACATTCCT 59.453 47.619 14.21 0.00 0.00 3.36
14 15 1.273048 TGCATGCACTCCAAACATTCC 59.727 47.619 18.46 0.00 0.00 3.01
15 16 2.728690 TGCATGCACTCCAAACATTC 57.271 45.000 18.46 0.00 0.00 2.67
44 45 3.242870 GCCTCCATCAATGTGATTTCGTC 60.243 47.826 0.00 0.00 34.28 4.20
46 47 2.684374 TGCCTCCATCAATGTGATTTCG 59.316 45.455 0.00 0.00 34.28 3.46
113 116 7.927629 TGGGAGAAAAATCAGAACTCAAAAATG 59.072 33.333 0.00 0.00 0.00 2.32
119 122 4.065088 CGTGGGAGAAAAATCAGAACTCA 58.935 43.478 0.00 0.00 0.00 3.41
133 136 3.379445 GGCGGAAGTCGTGGGAGA 61.379 66.667 0.00 0.00 41.72 3.71
134 137 2.521958 ATTGGCGGAAGTCGTGGGAG 62.522 60.000 0.00 0.00 39.79 4.30
140 143 1.086696 AATCACATTGGCGGAAGTCG 58.913 50.000 0.00 0.00 39.79 4.18
148 151 2.426738 TCATCCCGAAAATCACATTGGC 59.573 45.455 0.00 0.00 0.00 4.52
158 161 4.555262 GATGCAAAGTTTCATCCCGAAAA 58.445 39.130 13.03 0.00 45.11 2.29
212 215 5.385617 CAAAAAGCAGAATCTTGAGTACGG 58.614 41.667 0.00 0.00 0.00 4.02
229 234 3.252215 TCATGTAACGGTGGAGCAAAAAG 59.748 43.478 0.00 0.00 0.00 2.27
241 246 9.093970 TCAAGTTACTTTATCATCATGTAACGG 57.906 33.333 0.00 0.00 44.19 4.44
243 248 9.922305 GCTCAAGTTACTTTATCATCATGTAAC 57.078 33.333 0.00 0.00 41.60 2.50
248 253 6.582636 TCCGCTCAAGTTACTTTATCATCAT 58.417 36.000 0.00 0.00 0.00 2.45
300 305 8.065007 TGGCTCAAAATAAAGGGGTCTAATAAT 58.935 33.333 0.00 0.00 0.00 1.28
305 310 4.938575 TGGCTCAAAATAAAGGGGTCTA 57.061 40.909 0.00 0.00 0.00 2.59
321 326 8.598075 GTTAATCACATGATCAAAATTTGGCTC 58.402 33.333 5.83 4.39 32.75 4.70
376 381 9.412460 AGATTTGTATTTGAGCTTTCCATGATA 57.588 29.630 0.00 0.00 0.00 2.15
380 385 7.177216 TGTCAGATTTGTATTTGAGCTTTCCAT 59.823 33.333 0.00 0.00 0.00 3.41
381 386 6.489700 TGTCAGATTTGTATTTGAGCTTTCCA 59.510 34.615 0.00 0.00 0.00 3.53
430 451 9.396022 GGTCCAACTTTAATGATCTTCTATTGA 57.604 33.333 0.00 0.00 0.00 2.57
431 452 9.401058 AGGTCCAACTTTAATGATCTTCTATTG 57.599 33.333 0.00 0.00 0.00 1.90
435 456 9.807921 TTTTAGGTCCAACTTTAATGATCTTCT 57.192 29.630 0.00 0.00 0.00 2.85
470 491 3.389983 TCCCTCCGTCTGGGTTTATTATG 59.610 47.826 0.00 0.00 44.84 1.90
471 492 3.646637 CTCCCTCCGTCTGGGTTTATTAT 59.353 47.826 0.00 0.00 44.84 1.28
488 510 5.661759 ACGAGGAATTTGACTTATACTCCCT 59.338 40.000 0.00 0.00 0.00 4.20
490 512 8.196103 AGTAACGAGGAATTTGACTTATACTCC 58.804 37.037 0.00 0.00 0.00 3.85
499 521 8.189460 AGTATGTAGAGTAACGAGGAATTTGAC 58.811 37.037 0.00 0.00 0.00 3.18
570 592 5.989168 TCGGTATTGCTAAACCACATCTATG 59.011 40.000 3.43 0.00 35.35 2.23
589 611 5.771469 TGTCTAACGTCAGATTTTTCGGTA 58.229 37.500 0.00 0.00 0.00 4.02
599 621 6.700081 GCCATACATAAATGTCTAACGTCAGA 59.300 38.462 0.00 0.00 41.97 3.27
600 622 6.478673 TGCCATACATAAATGTCTAACGTCAG 59.521 38.462 0.00 0.00 41.97 3.51
604 626 7.530525 CGATTTGCCATACATAAATGTCTAACG 59.469 37.037 0.00 0.00 41.97 3.18
612 634 9.248291 GAAACATTCGATTTGCCATACATAAAT 57.752 29.630 0.00 0.00 0.00 1.40
619 641 7.424803 CCATAAGAAACATTCGATTTGCCATA 58.575 34.615 0.00 0.00 34.02 2.74
638 660 6.598525 TCGCGTCAATATAAATTGCCATAAG 58.401 36.000 5.77 0.00 41.96 1.73
657 679 5.390613 CAAACTAAATTTTCATCCTCGCGT 58.609 37.500 5.77 0.00 0.00 6.01
659 681 5.160641 TGCAAACTAAATTTTCATCCTCGC 58.839 37.500 0.00 0.00 0.00 5.03
687 709 9.883142 ACATTTTAGTTTTCCTGAAAATTGTCA 57.117 25.926 8.19 0.00 41.64 3.58
700 722 9.401873 AGCACGGTAAAATACATTTTAGTTTTC 57.598 29.630 7.27 0.00 41.38 2.29
707 733 7.203910 TGACAAAGCACGGTAAAATACATTTT 58.796 30.769 5.35 5.35 42.21 1.82
713 739 7.493743 TTACTTGACAAAGCACGGTAAAATA 57.506 32.000 0.00 0.00 36.84 1.40
722 748 7.306574 GGCTAACAAATTTACTTGACAAAGCAC 60.307 37.037 0.00 0.00 36.84 4.40
734 760 6.432107 TGTTTGTCGAGGCTAACAAATTTAC 58.568 36.000 22.84 14.93 44.54 2.01
739 765 6.621316 TTTATGTTTGTCGAGGCTAACAAA 57.379 33.333 18.55 18.55 41.67 2.83
744 770 5.935206 TCACAATTTATGTTTGTCGAGGCTA 59.065 36.000 0.00 0.00 41.46 3.93
746 772 5.041951 TCACAATTTATGTTTGTCGAGGC 57.958 39.130 0.00 0.00 41.46 4.70
762 788 9.187455 GACAAACCAAACGTTTTATATCACAAT 57.813 29.630 11.66 0.00 42.15 2.71
766 792 9.751542 AATTGACAAACCAAACGTTTTATATCA 57.248 25.926 11.66 7.92 42.15 2.15
771 797 7.488471 CCAGTAATTGACAAACCAAACGTTTTA 59.512 33.333 11.66 0.00 42.15 1.52
782 841 3.296628 CGCACACCAGTAATTGACAAAC 58.703 45.455 0.00 0.00 0.00 2.93
787 846 1.346395 AGACCGCACACCAGTAATTGA 59.654 47.619 0.00 0.00 0.00 2.57
866 927 1.273886 GCTTTTTATGGTGGCGGGAAA 59.726 47.619 0.00 0.00 0.00 3.13
877 938 1.067635 AGCAGTTGCCGGCTTTTTATG 60.068 47.619 29.70 17.59 39.17 1.90
943 1004 3.378399 GAGAGGAGGGGTTCTGCGC 62.378 68.421 0.00 0.00 38.98 6.09
985 1046 2.278206 CATCCTCTGGTCGACGCG 60.278 66.667 9.92 3.53 0.00 6.01
1055 1116 2.104963 TCGAGGATGGAGAAGATCTCGA 59.895 50.000 8.82 8.82 44.28 4.04
1098 1159 0.832135 AGAGAAGCTTGGGGTCGTCA 60.832 55.000 2.10 0.00 0.00 4.35
1467 1528 2.203938 AGGCTCCCCAACGAGGAA 60.204 61.111 0.00 0.00 41.22 3.36
1608 1669 1.395826 CGGCTCGGGAGAAGAGGAAT 61.396 60.000 0.00 0.00 39.18 3.01
1900 1994 1.371022 CGGCGATCCTGACGATCTG 60.371 63.158 0.00 0.00 45.34 2.90
1966 2063 0.698238 AATGTTGGCTGGCTGGTCTA 59.302 50.000 2.00 0.00 0.00 2.59
1969 2066 0.760189 ACAAATGTTGGCTGGCTGGT 60.760 50.000 2.00 0.00 34.12 4.00
1973 2070 1.544724 TAGGACAAATGTTGGCTGGC 58.455 50.000 0.00 0.00 39.20 4.85
1977 2074 3.193267 TGCAAGATAGGACAAATGTTGGC 59.807 43.478 0.00 0.00 38.21 4.52
1981 2078 6.488006 GGATACATGCAAGATAGGACAAATGT 59.512 38.462 0.00 0.00 0.00 2.71
1984 2081 6.057533 CAGGATACATGCAAGATAGGACAAA 58.942 40.000 0.00 0.00 41.41 2.83
1985 2082 5.614308 CAGGATACATGCAAGATAGGACAA 58.386 41.667 0.00 0.00 41.41 3.18
1986 2083 4.503817 GCAGGATACATGCAAGATAGGACA 60.504 45.833 0.00 0.00 43.31 4.02
2002 2133 0.756903 GGAAGCGTTAGGGCAGGATA 59.243 55.000 0.00 0.00 34.64 2.59
2102 2610 3.069016 CCGTATATAAGTGGTGGCACTGA 59.931 47.826 18.45 1.32 35.30 3.41
2103 2611 3.390135 CCGTATATAAGTGGTGGCACTG 58.610 50.000 18.45 0.00 35.30 3.66
2105 2613 2.140717 GCCGTATATAAGTGGTGGCAC 58.859 52.381 9.70 9.70 40.66 5.01
2106 2614 1.071071 GGCCGTATATAAGTGGTGGCA 59.929 52.381 2.51 0.00 42.71 4.92
2108 2616 2.367567 AGTGGCCGTATATAAGTGGTGG 59.632 50.000 0.00 0.00 0.00 4.61
2109 2617 3.554337 GGAGTGGCCGTATATAAGTGGTG 60.554 52.174 0.00 0.00 0.00 4.17
2110 2618 2.631545 GGAGTGGCCGTATATAAGTGGT 59.368 50.000 0.00 0.00 0.00 4.16
2112 2620 2.631062 TGGGAGTGGCCGTATATAAGTG 59.369 50.000 0.00 0.00 37.63 3.16
2113 2621 2.897969 CTGGGAGTGGCCGTATATAAGT 59.102 50.000 0.00 0.00 37.63 2.24
2115 2623 2.895404 GTCTGGGAGTGGCCGTATATAA 59.105 50.000 0.00 0.00 37.63 0.98
2116 2624 2.522185 GTCTGGGAGTGGCCGTATATA 58.478 52.381 0.00 0.00 37.63 0.86
2117 2625 1.339097 GTCTGGGAGTGGCCGTATAT 58.661 55.000 0.00 0.00 37.63 0.86
2118 2626 0.757935 GGTCTGGGAGTGGCCGTATA 60.758 60.000 0.00 0.00 37.63 1.47
2119 2627 2.064581 GGTCTGGGAGTGGCCGTAT 61.065 63.158 0.00 0.00 37.63 3.06
2120 2628 2.682494 GGTCTGGGAGTGGCCGTA 60.682 66.667 0.00 0.00 37.63 4.02
2124 2632 2.930562 ACTGGGTCTGGGAGTGGC 60.931 66.667 0.00 0.00 0.00 5.01
2126 2634 1.127567 TTGGACTGGGTCTGGGAGTG 61.128 60.000 0.00 0.00 32.47 3.51
2128 2636 0.838122 AGTTGGACTGGGTCTGGGAG 60.838 60.000 0.00 0.00 32.47 4.30
2129 2637 0.490017 TAGTTGGACTGGGTCTGGGA 59.510 55.000 0.00 0.00 32.47 4.37
2131 2639 1.645710 AGTAGTTGGACTGGGTCTGG 58.354 55.000 0.00 0.00 32.47 3.86
2133 2641 2.043252 AGCTAGTAGTTGGACTGGGTCT 59.957 50.000 0.00 0.00 33.93 3.85
2135 2643 2.625282 AGCTAGTAGTTGGACTGGGT 57.375 50.000 0.00 0.00 34.25 4.51
2136 2644 3.381908 CACTAGCTAGTAGTTGGACTGGG 59.618 52.174 25.63 5.63 40.27 4.45
2137 2645 4.017808 ACACTAGCTAGTAGTTGGACTGG 58.982 47.826 25.63 11.84 40.27 4.00
2139 2647 5.651576 GGTAACACTAGCTAGTAGTTGGACT 59.348 44.000 30.86 18.51 40.27 3.85
2141 2649 4.637534 CGGTAACACTAGCTAGTAGTTGGA 59.362 45.833 30.86 19.81 40.27 3.53
2142 2650 4.397417 ACGGTAACACTAGCTAGTAGTTGG 59.603 45.833 30.86 24.94 40.27 3.77
2143 2651 5.557891 ACGGTAACACTAGCTAGTAGTTG 57.442 43.478 30.86 23.09 40.27 3.16
2145 2653 3.868077 CGACGGTAACACTAGCTAGTAGT 59.132 47.826 25.63 21.01 43.31 2.73
2146 2654 3.868077 ACGACGGTAACACTAGCTAGTAG 59.132 47.826 25.63 20.42 34.13 2.57
2147 2655 3.618594 CACGACGGTAACACTAGCTAGTA 59.381 47.826 25.63 8.44 34.13 1.82
2148 2656 2.417933 CACGACGGTAACACTAGCTAGT 59.582 50.000 20.95 20.95 36.90 2.57
2149 2657 2.674852 TCACGACGGTAACACTAGCTAG 59.325 50.000 19.44 19.44 0.00 3.42
2151 2659 1.527034 TCACGACGGTAACACTAGCT 58.473 50.000 0.00 0.00 0.00 3.32
2152 2660 2.556534 ATCACGACGGTAACACTAGC 57.443 50.000 0.00 0.00 0.00 3.42
2153 2661 5.287035 GGTTTTATCACGACGGTAACACTAG 59.713 44.000 0.00 0.00 0.00 2.57
2154 2662 5.048083 AGGTTTTATCACGACGGTAACACTA 60.048 40.000 0.00 0.00 0.00 2.74
2155 2663 3.989817 GGTTTTATCACGACGGTAACACT 59.010 43.478 0.00 0.00 0.00 3.55
2156 2664 3.989817 AGGTTTTATCACGACGGTAACAC 59.010 43.478 0.00 0.00 0.00 3.32
2157 2665 4.255833 AGGTTTTATCACGACGGTAACA 57.744 40.909 0.00 0.00 0.00 2.41
2158 2666 4.143052 CCAAGGTTTTATCACGACGGTAAC 60.143 45.833 0.00 0.00 0.00 2.50
2159 2667 3.995705 CCAAGGTTTTATCACGACGGTAA 59.004 43.478 0.00 0.00 0.00 2.85
2160 2668 3.257873 TCCAAGGTTTTATCACGACGGTA 59.742 43.478 0.00 0.00 0.00 4.02
2162 2670 2.690786 TCCAAGGTTTTATCACGACGG 58.309 47.619 0.00 0.00 0.00 4.79
2163 2671 3.930229 TCATCCAAGGTTTTATCACGACG 59.070 43.478 0.00 0.00 0.00 5.12
2164 2672 5.584649 TCATCATCCAAGGTTTTATCACGAC 59.415 40.000 0.00 0.00 0.00 4.34
2165 2673 5.739959 TCATCATCCAAGGTTTTATCACGA 58.260 37.500 0.00 0.00 0.00 4.35
2167 2675 9.125026 AGTTATCATCATCCAAGGTTTTATCAC 57.875 33.333 0.00 0.00 0.00 3.06
2170 2678 7.014615 GGCAGTTATCATCATCCAAGGTTTTAT 59.985 37.037 0.00 0.00 0.00 1.40
2171 2679 6.321181 GGCAGTTATCATCATCCAAGGTTTTA 59.679 38.462 0.00 0.00 0.00 1.52
2176 2959 3.567164 GTGGCAGTTATCATCATCCAAGG 59.433 47.826 0.00 0.00 0.00 3.61
2183 2966 2.289382 ACACGTGTGGCAGTTATCATCA 60.289 45.455 22.71 0.00 34.19 3.07
2186 2969 1.507562 CACACGTGTGGCAGTTATCA 58.492 50.000 35.65 0.00 42.10 2.15
2220 3003 3.376347 CACATTAAACGTGTGGGCG 57.624 52.632 0.00 0.00 42.43 6.13
2233 3016 7.507616 TGGGTTATTTCTTTTAGACACCACATT 59.492 33.333 0.00 0.00 0.00 2.71
2247 3030 0.322187 AGGCGCGTGGGTTATTTCTT 60.322 50.000 8.43 0.00 0.00 2.52
2253 3036 3.372730 ACGTAGGCGCGTGGGTTA 61.373 61.111 13.84 0.00 43.99 2.85
2261 3044 1.837538 TTTTGCTCACACGTAGGCGC 61.838 55.000 0.00 0.00 42.83 6.53
2274 3057 0.821711 TGGGCGCTAGTTGTTTTGCT 60.822 50.000 7.64 0.00 0.00 3.91
2315 3101 0.889306 GTAGGCGTGTGAGAAGGACT 59.111 55.000 0.00 0.00 0.00 3.85
2619 3410 7.610580 ACCCCTAAAGTTTTCAAATCATGAA 57.389 32.000 0.00 0.00 46.22 2.57
2740 3531 2.738521 CGCTACACGGCAACTGCT 60.739 61.111 1.06 0.00 41.70 4.24
2985 3785 4.657824 CTCGTCCACACGCCCGTT 62.658 66.667 0.00 0.00 46.28 4.44
3019 3819 2.906897 CACGCACAAGGGCTGGTT 60.907 61.111 0.00 0.00 0.00 3.67
3094 3896 1.512156 GCCCACACGTCCGTTTCAAT 61.512 55.000 0.00 0.00 0.00 2.57
3234 4037 2.279935 TTGGAAACACTAACGCCCAT 57.720 45.000 0.00 0.00 42.67 4.00
3257 4060 4.393062 ACAGACATCGACCATTAGCAAAAG 59.607 41.667 0.00 0.00 0.00 2.27
3262 4065 3.521560 TCAACAGACATCGACCATTAGC 58.478 45.455 0.00 0.00 0.00 3.09
3263 4066 6.668541 AATTCAACAGACATCGACCATTAG 57.331 37.500 0.00 0.00 0.00 1.73
3264 4067 6.878923 AGAAATTCAACAGACATCGACCATTA 59.121 34.615 0.00 0.00 0.00 1.90
3266 4069 5.248640 AGAAATTCAACAGACATCGACCAT 58.751 37.500 0.00 0.00 0.00 3.55
3268 4071 5.637810 TGTAGAAATTCAACAGACATCGACC 59.362 40.000 0.00 0.00 0.00 4.79
3269 4072 6.183360 CCTGTAGAAATTCAACAGACATCGAC 60.183 42.308 13.51 0.00 0.00 4.20
3270 4073 5.869344 CCTGTAGAAATTCAACAGACATCGA 59.131 40.000 13.51 0.00 0.00 3.59
3271 4074 5.446473 GCCTGTAGAAATTCAACAGACATCG 60.446 44.000 13.51 2.04 0.00 3.84
3272 4075 5.446473 CGCCTGTAGAAATTCAACAGACATC 60.446 44.000 13.51 3.24 0.00 3.06
3273 4076 4.393062 CGCCTGTAGAAATTCAACAGACAT 59.607 41.667 13.51 0.00 0.00 3.06
3274 4077 3.745975 CGCCTGTAGAAATTCAACAGACA 59.254 43.478 13.51 2.49 0.00 3.41
3275 4078 3.994392 TCGCCTGTAGAAATTCAACAGAC 59.006 43.478 13.51 4.45 0.00 3.51
3276 4079 4.265904 TCGCCTGTAGAAATTCAACAGA 57.734 40.909 13.51 0.00 0.00 3.41
3277 4080 4.259970 CGATCGCCTGTAGAAATTCAACAG 60.260 45.833 0.26 7.48 0.00 3.16
3278 4081 3.616821 CGATCGCCTGTAGAAATTCAACA 59.383 43.478 0.26 0.00 0.00 3.33
3279 4082 3.001330 CCGATCGCCTGTAGAAATTCAAC 59.999 47.826 10.32 0.00 0.00 3.18
3280 4083 3.194861 CCGATCGCCTGTAGAAATTCAA 58.805 45.455 10.32 0.00 0.00 2.69
3281 4084 2.483013 CCCGATCGCCTGTAGAAATTCA 60.483 50.000 10.32 0.00 0.00 2.57
3282 4085 2.135933 CCCGATCGCCTGTAGAAATTC 58.864 52.381 10.32 0.00 0.00 2.17
3283 4086 1.485066 ACCCGATCGCCTGTAGAAATT 59.515 47.619 10.32 0.00 0.00 1.82
3284 4087 1.068741 GACCCGATCGCCTGTAGAAAT 59.931 52.381 10.32 0.00 0.00 2.17
3285 4088 0.458669 GACCCGATCGCCTGTAGAAA 59.541 55.000 10.32 0.00 0.00 2.52
3286 4089 1.721664 CGACCCGATCGCCTGTAGAA 61.722 60.000 10.32 0.00 45.52 2.10
3287 4090 2.184830 CGACCCGATCGCCTGTAGA 61.185 63.158 10.32 0.00 45.52 2.59
3288 4091 2.331805 CGACCCGATCGCCTGTAG 59.668 66.667 10.32 3.14 45.52 2.74
3523 4326 8.539117 TGATGTCAATCCTCTATAGTTCTTCA 57.461 34.615 0.00 0.00 31.15 3.02
3527 4330 8.474025 CCCTATGATGTCAATCCTCTATAGTTC 58.526 40.741 0.00 0.00 31.15 3.01
3528 4331 7.093112 GCCCTATGATGTCAATCCTCTATAGTT 60.093 40.741 0.00 0.00 31.15 2.24
3529 4332 6.382570 GCCCTATGATGTCAATCCTCTATAGT 59.617 42.308 0.00 0.00 31.15 2.12
3530 4333 6.183360 GGCCCTATGATGTCAATCCTCTATAG 60.183 46.154 0.00 0.00 31.15 1.31
3531 4334 5.663106 GGCCCTATGATGTCAATCCTCTATA 59.337 44.000 0.00 0.00 31.15 1.31
3649 4452 9.267084 AGCTTCGAAAAATGCCTAAAATTTTAA 57.733 25.926 11.62 0.00 36.46 1.52
3650 4453 8.825667 AGCTTCGAAAAATGCCTAAAATTTTA 57.174 26.923 10.16 10.16 36.46 1.52
3651 4454 7.440856 TGAGCTTCGAAAAATGCCTAAAATTTT 59.559 29.630 8.75 8.75 38.54 1.82
3652 4455 6.928492 TGAGCTTCGAAAAATGCCTAAAATTT 59.072 30.769 0.00 0.00 0.00 1.82
3653 4456 6.366061 GTGAGCTTCGAAAAATGCCTAAAATT 59.634 34.615 0.00 0.00 0.00 1.82
3654 4457 5.863935 GTGAGCTTCGAAAAATGCCTAAAAT 59.136 36.000 0.00 0.00 0.00 1.82
3655 4458 5.219633 GTGAGCTTCGAAAAATGCCTAAAA 58.780 37.500 0.00 0.00 0.00 1.52
3656 4459 4.612712 CGTGAGCTTCGAAAAATGCCTAAA 60.613 41.667 0.00 0.00 0.00 1.85
3657 4460 3.120338 CGTGAGCTTCGAAAAATGCCTAA 60.120 43.478 0.00 0.00 0.00 2.69
3658 4461 2.415168 CGTGAGCTTCGAAAAATGCCTA 59.585 45.455 0.00 0.00 0.00 3.93
3659 4462 1.197721 CGTGAGCTTCGAAAAATGCCT 59.802 47.619 0.00 0.00 0.00 4.75
3660 4463 1.069227 ACGTGAGCTTCGAAAAATGCC 60.069 47.619 16.77 0.00 0.00 4.40
3661 4464 1.971962 CACGTGAGCTTCGAAAAATGC 59.028 47.619 10.90 0.00 0.00 3.56
3662 4465 1.971962 GCACGTGAGCTTCGAAAAATG 59.028 47.619 22.23 7.16 0.00 2.32
3663 4466 1.601903 TGCACGTGAGCTTCGAAAAAT 59.398 42.857 22.23 0.00 34.99 1.82
3664 4467 1.010580 TGCACGTGAGCTTCGAAAAA 58.989 45.000 22.23 0.39 34.99 1.94
3665 4468 0.303493 GTGCACGTGAGCTTCGAAAA 59.697 50.000 22.23 1.82 34.99 2.29
3666 4469 0.808060 TGTGCACGTGAGCTTCGAAA 60.808 50.000 22.23 0.00 34.99 3.46
3667 4470 0.808060 TTGTGCACGTGAGCTTCGAA 60.808 50.000 22.23 0.00 34.99 3.71
3668 4471 1.215014 CTTGTGCACGTGAGCTTCGA 61.215 55.000 22.23 2.98 34.99 3.71
3669 4472 1.202568 CTTGTGCACGTGAGCTTCG 59.797 57.895 22.23 9.99 34.99 3.79
3670 4473 1.160329 ACCTTGTGCACGTGAGCTTC 61.160 55.000 22.23 0.69 34.99 3.86
3671 4474 1.153168 ACCTTGTGCACGTGAGCTT 60.153 52.632 22.23 0.00 34.99 3.74
3672 4475 1.889105 CACCTTGTGCACGTGAGCT 60.889 57.895 22.23 0.00 34.99 4.09
3673 4476 2.633657 CACCTTGTGCACGTGAGC 59.366 61.111 22.23 11.33 0.00 4.26
3682 4485 2.507339 AAATTTGGACGCACCTTGTG 57.493 45.000 0.00 0.00 39.86 3.33
3683 4486 2.428890 TGAAAATTTGGACGCACCTTGT 59.571 40.909 0.00 0.00 39.86 3.16
3684 4487 3.090952 TGAAAATTTGGACGCACCTTG 57.909 42.857 0.00 0.00 39.86 3.61
3685 4488 3.554752 CCATGAAAATTTGGACGCACCTT 60.555 43.478 0.00 0.00 39.86 3.50
3686 4489 2.029110 CCATGAAAATTTGGACGCACCT 60.029 45.455 0.00 0.00 39.86 4.00
3687 4490 2.029470 TCCATGAAAATTTGGACGCACC 60.029 45.455 0.00 0.00 37.10 5.01
3688 4491 3.244976 CTCCATGAAAATTTGGACGCAC 58.755 45.455 0.00 0.00 37.10 5.34
3689 4492 2.890311 ACTCCATGAAAATTTGGACGCA 59.110 40.909 0.00 0.00 37.10 5.24
3690 4493 3.575965 ACTCCATGAAAATTTGGACGC 57.424 42.857 0.00 0.00 37.10 5.19
3691 4494 4.150451 GCAAACTCCATGAAAATTTGGACG 59.850 41.667 0.00 0.00 37.10 4.79
3692 4495 4.452114 GGCAAACTCCATGAAAATTTGGAC 59.548 41.667 0.00 0.00 37.10 4.02
3693 4496 4.504689 GGGCAAACTCCATGAAAATTTGGA 60.505 41.667 0.00 0.00 39.70 3.53
3694 4497 3.752747 GGGCAAACTCCATGAAAATTTGG 59.247 43.478 0.00 0.00 32.17 3.28
3695 4498 3.432933 CGGGCAAACTCCATGAAAATTTG 59.567 43.478 0.00 0.98 34.17 2.32
3696 4499 3.556843 CCGGGCAAACTCCATGAAAATTT 60.557 43.478 0.00 0.00 0.00 1.82
3697 4500 2.028203 CCGGGCAAACTCCATGAAAATT 60.028 45.455 0.00 0.00 0.00 1.82
3698 4501 1.550072 CCGGGCAAACTCCATGAAAAT 59.450 47.619 0.00 0.00 0.00 1.82
3699 4502 0.965439 CCGGGCAAACTCCATGAAAA 59.035 50.000 0.00 0.00 0.00 2.29
3700 4503 0.111446 TCCGGGCAAACTCCATGAAA 59.889 50.000 0.00 0.00 0.00 2.69
3701 4504 0.111446 TTCCGGGCAAACTCCATGAA 59.889 50.000 0.00 0.00 0.00 2.57
3702 4505 0.111446 TTTCCGGGCAAACTCCATGA 59.889 50.000 0.00 0.00 0.00 3.07
3703 4506 0.965439 TTTTCCGGGCAAACTCCATG 59.035 50.000 0.00 0.00 0.00 3.66
3704 4507 1.710816 TTTTTCCGGGCAAACTCCAT 58.289 45.000 0.00 0.00 0.00 3.41
3705 4508 3.209091 TTTTTCCGGGCAAACTCCA 57.791 47.368 0.00 0.00 0.00 3.86
3721 4524 6.710744 ACAGATGTCTAAACTCCGTGATTTTT 59.289 34.615 0.00 0.00 0.00 1.94
3722 4525 6.231211 ACAGATGTCTAAACTCCGTGATTTT 58.769 36.000 0.00 0.00 0.00 1.82
3723 4526 5.794894 ACAGATGTCTAAACTCCGTGATTT 58.205 37.500 0.00 0.00 0.00 2.17
3724 4527 5.407407 ACAGATGTCTAAACTCCGTGATT 57.593 39.130 0.00 0.00 0.00 2.57
3725 4528 5.407407 AACAGATGTCTAAACTCCGTGAT 57.593 39.130 0.00 0.00 0.00 3.06
3726 4529 4.866508 AACAGATGTCTAAACTCCGTGA 57.133 40.909 0.00 0.00 0.00 4.35
3727 4530 5.924475 AAAACAGATGTCTAAACTCCGTG 57.076 39.130 0.00 0.00 0.00 4.94
3728 4531 6.053005 TGAAAAACAGATGTCTAAACTCCGT 58.947 36.000 0.00 0.00 0.00 4.69
3729 4532 6.539649 TGAAAAACAGATGTCTAAACTCCG 57.460 37.500 0.00 0.00 0.00 4.63
3743 4546 7.063426 GGTTTCAACCTTCTTTCTGAAAAACAG 59.937 37.037 4.18 0.00 45.75 3.16
3744 4547 6.871492 GGTTTCAACCTTCTTTCTGAAAAACA 59.129 34.615 4.18 0.00 45.75 2.83
3745 4548 7.290857 GGTTTCAACCTTCTTTCTGAAAAAC 57.709 36.000 4.18 2.78 45.75 2.43
3761 4564 2.265904 GCGGAGGTGGGGTTTCAAC 61.266 63.158 0.00 0.00 0.00 3.18
3762 4565 2.075355 ATGCGGAGGTGGGGTTTCAA 62.075 55.000 0.00 0.00 0.00 2.69
3763 4566 2.478335 GATGCGGAGGTGGGGTTTCA 62.478 60.000 0.00 0.00 0.00 2.69
3764 4567 1.749258 GATGCGGAGGTGGGGTTTC 60.749 63.158 0.00 0.00 0.00 2.78
3765 4568 2.355115 GATGCGGAGGTGGGGTTT 59.645 61.111 0.00 0.00 0.00 3.27
3766 4569 3.728373 GGATGCGGAGGTGGGGTT 61.728 66.667 0.00 0.00 0.00 4.11
3768 4571 3.280938 TTTGGATGCGGAGGTGGGG 62.281 63.158 0.00 0.00 0.00 4.96
3769 4572 1.750399 CTTTGGATGCGGAGGTGGG 60.750 63.158 0.00 0.00 0.00 4.61
3770 4573 0.107017 ATCTTTGGATGCGGAGGTGG 60.107 55.000 0.00 0.00 0.00 4.61
3771 4574 2.213499 GTATCTTTGGATGCGGAGGTG 58.787 52.381 0.00 0.00 33.71 4.00
3772 4575 1.837439 TGTATCTTTGGATGCGGAGGT 59.163 47.619 0.00 0.00 37.37 3.85
3773 4576 2.213499 GTGTATCTTTGGATGCGGAGG 58.787 52.381 0.00 0.00 37.37 4.30
3774 4577 2.905075 TGTGTATCTTTGGATGCGGAG 58.095 47.619 0.00 0.00 37.37 4.63
3775 4578 3.342377 TTGTGTATCTTTGGATGCGGA 57.658 42.857 0.00 0.00 37.37 5.54
3776 4579 3.440173 ACTTTGTGTATCTTTGGATGCGG 59.560 43.478 0.00 0.00 37.37 5.69
3777 4580 4.154015 TGACTTTGTGTATCTTTGGATGCG 59.846 41.667 0.00 0.00 37.37 4.73
3778 4581 5.627499 TGACTTTGTGTATCTTTGGATGC 57.373 39.130 0.00 0.00 35.57 3.91
3779 4582 9.132521 GAAAATGACTTTGTGTATCTTTGGATG 57.867 33.333 0.00 0.00 33.71 3.51
3780 4583 8.859090 TGAAAATGACTTTGTGTATCTTTGGAT 58.141 29.630 0.00 0.00 36.07 3.41
3781 4584 8.231692 TGAAAATGACTTTGTGTATCTTTGGA 57.768 30.769 0.00 0.00 0.00 3.53
3782 4585 9.480053 AATGAAAATGACTTTGTGTATCTTTGG 57.520 29.630 0.00 0.00 0.00 3.28
3844 4647 5.046663 GGGAAAGGTGGCTTTGAATTTATCA 60.047 40.000 0.00 0.00 35.85 2.15
3848 4651 2.037121 CGGGAAAGGTGGCTTTGAATTT 59.963 45.455 0.00 0.00 0.00 1.82
3855 4658 1.903404 CTTGCGGGAAAGGTGGCTT 60.903 57.895 0.00 0.00 0.00 4.35
3861 4664 1.301677 GACAGAGCTTGCGGGAAAGG 61.302 60.000 0.00 0.00 0.00 3.11
3868 4671 1.444383 TGTAGCGACAGAGCTTGCG 60.444 57.895 0.00 0.00 46.80 4.85
3869 4672 1.355066 GGTGTAGCGACAGAGCTTGC 61.355 60.000 0.00 0.00 46.80 4.01
3873 4676 2.649331 TTTAGGTGTAGCGACAGAGC 57.351 50.000 0.00 0.00 35.82 4.09
3876 4679 2.960819 AGCTTTTAGGTGTAGCGACAG 58.039 47.619 0.00 0.00 39.82 3.51
3878 4681 2.415512 CCAAGCTTTTAGGTGTAGCGAC 59.584 50.000 0.00 0.00 39.82 5.19
3908 4711 0.756294 TGTGTTGGTGTGAGATCGGT 59.244 50.000 0.00 0.00 0.00 4.69
3910 4713 2.930040 GGTATGTGTTGGTGTGAGATCG 59.070 50.000 0.00 0.00 0.00 3.69
3915 4718 4.262721 GGTTAGAGGTATGTGTTGGTGTGA 60.263 45.833 0.00 0.00 0.00 3.58
3916 4719 4.000988 GGTTAGAGGTATGTGTTGGTGTG 58.999 47.826 0.00 0.00 0.00 3.82
3917 4720 3.306502 CGGTTAGAGGTATGTGTTGGTGT 60.307 47.826 0.00 0.00 0.00 4.16
3919 4722 2.235402 CCGGTTAGAGGTATGTGTTGGT 59.765 50.000 0.00 0.00 0.00 3.67
3921 4724 3.604875 ACCGGTTAGAGGTATGTGTTG 57.395 47.619 0.00 0.00 40.80 3.33
3922 4725 3.131755 GCTACCGGTTAGAGGTATGTGTT 59.868 47.826 15.04 0.00 42.68 3.32
3924 4727 2.035576 GGCTACCGGTTAGAGGTATGTG 59.964 54.545 15.04 0.00 42.68 3.21
3925 4728 2.314246 GGCTACCGGTTAGAGGTATGT 58.686 52.381 15.04 0.00 42.68 2.29
3926 4729 1.617357 GGGCTACCGGTTAGAGGTATG 59.383 57.143 15.04 0.00 42.68 2.39
3928 4731 3.520623 GGGCTACCGGTTAGAGGTA 57.479 57.895 15.04 0.00 42.81 3.08
3971 4779 4.471904 TGTTAGATCGGTTGATGCTCTT 57.528 40.909 0.00 0.00 34.09 2.85
3985 4793 4.770531 GGTTTGCCTAAGGGTTTGTTAGAT 59.229 41.667 0.00 0.00 34.45 1.98
3990 4798 2.036387 GTGGTTTGCCTAAGGGTTTGT 58.964 47.619 0.00 0.00 35.27 2.83
3993 4801 2.247358 CATGTGGTTTGCCTAAGGGTT 58.753 47.619 0.00 0.00 35.27 4.11
3995 4803 0.532115 GCATGTGGTTTGCCTAAGGG 59.468 55.000 0.00 0.00 33.95 3.95
4000 4808 1.545582 GTATGTGCATGTGGTTTGCCT 59.454 47.619 0.00 0.00 39.39 4.75
4002 4810 2.489329 AGAGTATGTGCATGTGGTTTGC 59.511 45.455 0.00 0.00 40.55 3.68
4003 4811 5.178061 TCTAGAGTATGTGCATGTGGTTTG 58.822 41.667 0.00 0.00 0.00 2.93
4004 4812 5.420725 TCTAGAGTATGTGCATGTGGTTT 57.579 39.130 0.00 0.00 0.00 3.27
4005 4813 5.420725 TTCTAGAGTATGTGCATGTGGTT 57.579 39.130 0.00 0.00 0.00 3.67
4006 4814 5.453903 GGATTCTAGAGTATGTGCATGTGGT 60.454 44.000 0.00 0.00 0.00 4.16
4007 4815 4.993584 GGATTCTAGAGTATGTGCATGTGG 59.006 45.833 0.00 0.00 0.00 4.17
4008 4816 4.683320 CGGATTCTAGAGTATGTGCATGTG 59.317 45.833 0.00 0.00 0.00 3.21
4018 4828 2.891580 GGTGGATGCGGATTCTAGAGTA 59.108 50.000 0.00 0.00 0.00 2.59
4031 4841 2.746277 GTGGACGGTGGTGGATGC 60.746 66.667 0.00 0.00 0.00 3.91
4033 4843 1.910580 GATGGTGGACGGTGGTGGAT 61.911 60.000 0.00 0.00 0.00 3.41
4034 4844 2.528127 ATGGTGGACGGTGGTGGA 60.528 61.111 0.00 0.00 0.00 4.02
4037 4847 3.327404 GGGATGGTGGACGGTGGT 61.327 66.667 0.00 0.00 0.00 4.16
4043 4853 2.777692 TCCTAAAGATGGGATGGTGGAC 59.222 50.000 0.00 0.00 29.99 4.02
4047 4857 2.021042 TCCCTCCTAAAGATGGGATGGT 60.021 50.000 0.00 0.00 43.20 3.55
4057 4867 5.355350 GTCAATGTGTTGATCCCTCCTAAAG 59.645 44.000 0.00 0.00 45.46 1.85
4060 4870 3.199946 GGTCAATGTGTTGATCCCTCCTA 59.800 47.826 0.00 0.00 45.46 2.94
4086 4896 1.227263 CGACGGCAGGTGGGATTAG 60.227 63.158 0.00 0.00 0.00 1.73
4087 4897 1.683025 TCGACGGCAGGTGGGATTA 60.683 57.895 0.00 0.00 0.00 1.75
4089 4899 3.771160 GTCGACGGCAGGTGGGAT 61.771 66.667 0.00 0.00 0.00 3.85
4101 4911 2.728383 CGTCGTGGTGGTGTCGAC 60.728 66.667 9.11 9.11 46.57 4.20
4114 4924 1.632046 GGTGGTGTTGTATGGCGTCG 61.632 60.000 0.00 0.00 0.00 5.12
4138 4948 2.738139 CATGTGGAGACGTGCGCA 60.738 61.111 5.66 5.66 39.05 6.09
4143 4953 2.408271 ATCAATGCATGTGGAGACGT 57.592 45.000 0.00 0.00 0.00 4.34
4144 4954 3.060978 CAATCAATGCATGTGGAGACG 57.939 47.619 0.00 0.00 0.00 4.18
4157 4967 2.804572 CGATGGAGTCTCGGCAATCAAT 60.805 50.000 0.00 0.00 32.58 2.57
4159 4969 0.103026 CGATGGAGTCTCGGCAATCA 59.897 55.000 0.00 0.00 32.58 2.57
4160 4970 0.103208 ACGATGGAGTCTCGGCAATC 59.897 55.000 6.72 0.00 40.37 2.67
4163 4973 2.885113 CACGATGGAGTCTCGGCA 59.115 61.111 6.72 0.00 40.37 5.69
4198 5008 1.404035 CATCTACCACATCGACGACCA 59.596 52.381 0.00 0.00 0.00 4.02
4199 5009 1.864435 GCATCTACCACATCGACGACC 60.864 57.143 0.00 0.00 0.00 4.79
4210 5021 1.373059 TGCGGTGTTGCATCTACCA 59.627 52.632 13.04 0.00 40.62 3.25
4226 5037 2.016096 GCTGGAGGGAAGAGTTGATGC 61.016 57.143 0.00 0.00 0.00 3.91
4245 5056 0.881796 GTTTTGGAGCTGGTACTGGC 59.118 55.000 0.00 0.00 0.00 4.85
4250 5061 1.448985 GCATCGTTTTGGAGCTGGTA 58.551 50.000 0.00 0.00 0.00 3.25
4255 5066 1.425428 CGAGGCATCGTTTTGGAGC 59.575 57.895 13.51 0.00 44.09 4.70
4271 5082 1.747355 GGTATCGTTGTCCCTCTTCGA 59.253 52.381 0.00 0.00 35.14 3.71
4273 5084 3.604875 TTGGTATCGTTGTCCCTCTTC 57.395 47.619 0.00 0.00 0.00 2.87
4310 5121 4.003648 CCTACATTTGTGAGACCCTTGAC 58.996 47.826 0.00 0.00 0.00 3.18
4311 5122 3.009033 CCCTACATTTGTGAGACCCTTGA 59.991 47.826 0.00 0.00 0.00 3.02
4312 5123 3.244911 ACCCTACATTTGTGAGACCCTTG 60.245 47.826 0.00 0.00 0.00 3.61
4313 5124 2.986728 ACCCTACATTTGTGAGACCCTT 59.013 45.455 0.00 0.00 0.00 3.95
4314 5125 2.632537 ACCCTACATTTGTGAGACCCT 58.367 47.619 0.00 0.00 0.00 4.34
4315 5126 3.434940 AACCCTACATTTGTGAGACCC 57.565 47.619 0.00 0.00 0.00 4.46
4349 5161 3.060615 CTGCCCACCTTGCTCAGC 61.061 66.667 0.00 0.00 0.00 4.26
4351 5163 2.149383 AGTCTGCCCACCTTGCTCA 61.149 57.895 0.00 0.00 0.00 4.26
4362 5174 0.376152 CATCATCGTTGCAGTCTGCC 59.624 55.000 21.99 6.69 44.23 4.85
4363 5175 0.247974 GCATCATCGTTGCAGTCTGC 60.248 55.000 18.32 18.32 45.29 4.26
4364 5176 0.376152 GGCATCATCGTTGCAGTCTG 59.624 55.000 0.00 0.00 41.95 3.51
4376 5189 2.359900 GTTTCCTTGTCGAGGCATCAT 58.640 47.619 0.47 0.00 45.87 2.45
4412 5225 2.186903 GTCATGGCGGACGATGGT 59.813 61.111 0.00 0.00 0.00 3.55
4437 5250 0.461135 ATGCCGGTGAAAATCATGCC 59.539 50.000 1.90 0.00 0.00 4.40
4441 5254 1.668337 CGCAAATGCCGGTGAAAATCA 60.668 47.619 1.90 0.00 37.91 2.57
4442 5255 0.991344 CGCAAATGCCGGTGAAAATC 59.009 50.000 1.90 0.00 37.91 2.17
4448 5261 2.100216 GTAGCGCAAATGCCGGTG 59.900 61.111 11.47 0.00 37.91 4.94
4449 5262 3.131478 GGTAGCGCAAATGCCGGT 61.131 61.111 11.47 3.84 37.91 5.28
4452 5265 1.813753 TCGAGGTAGCGCAAATGCC 60.814 57.895 11.47 1.23 37.91 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.