Multiple sequence alignment - TraesCS5D01G426200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G426200 chr5D 100.000 3233 0 0 1 3233 484580260 484577028 0.000000e+00 5971.0
1 TraesCS5D01G426200 chr5A 88.715 2552 142 57 722 3233 606164016 606161571 0.000000e+00 2983.0
2 TraesCS5D01G426200 chr5A 93.043 230 13 2 521 749 606164294 606164067 1.860000e-87 333.0
3 TraesCS5D01G426200 chr5B 91.737 1549 93 19 253 1795 595664407 595662888 0.000000e+00 2119.0
4 TraesCS5D01G426200 chr5B 86.576 1475 116 29 1786 3233 595662526 595661107 0.000000e+00 1552.0
5 TraesCS5D01G426200 chr5B 84.778 473 40 14 463 912 75544332 75543869 2.290000e-121 446.0
6 TraesCS5D01G426200 chr5B 92.000 50 4 0 145 194 595664540 595664491 1.610000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G426200 chr5D 484577028 484580260 3232 True 5971.000000 5971 100.000000 1 3233 1 chr5D.!!$R1 3232
1 TraesCS5D01G426200 chr5A 606161571 606164294 2723 True 1658.000000 2983 90.879000 521 3233 2 chr5A.!!$R1 2712
2 TraesCS5D01G426200 chr5B 595661107 595664540 3433 True 1247.433333 2119 90.104333 145 3233 3 chr5B.!!$R2 3088

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 197 0.036306 AAGGCGGGTCGATTTGTTCT 59.964 50.0 0.0 0.0 0.00 3.01 F
717 835 0.250640 AACTTGCCAGTCAGCCTGAG 60.251 55.0 0.0 0.0 44.49 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1265 1397 0.383949 TGCCCACAAGAAGAAAACGC 59.616 50.0 0.0 0.0 0.0 4.84 R
2527 3049 0.108138 AAGAATCCTGGTTCCTCGCG 60.108 55.0 0.0 0.0 0.0 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.950758 GGTACGATCTCTCTCCGGC 59.049 63.158 0.00 0.00 0.00 6.13
41 42 1.570475 GTACGATCTCTCTCCGGCG 59.430 63.158 0.00 0.00 0.00 6.46
42 43 1.597302 TACGATCTCTCTCCGGCGG 60.597 63.158 22.51 22.51 0.00 6.13
43 44 4.335584 CGATCTCTCTCCGGCGGC 62.336 72.222 23.83 3.06 0.00 6.53
44 45 2.909965 GATCTCTCTCCGGCGGCT 60.910 66.667 23.83 0.00 0.00 5.52
45 46 2.909965 ATCTCTCTCCGGCGGCTC 60.910 66.667 23.83 0.00 0.00 4.70
46 47 3.429372 ATCTCTCTCCGGCGGCTCT 62.429 63.158 23.83 0.00 0.00 4.09
47 48 3.591835 CTCTCTCCGGCGGCTCTC 61.592 72.222 23.83 0.00 0.00 3.20
67 68 3.917760 GCTCTATGCGCCCCGACT 61.918 66.667 4.18 0.00 0.00 4.18
68 69 2.815308 CTCTATGCGCCCCGACTT 59.185 61.111 4.18 0.00 0.00 3.01
69 70 1.144057 CTCTATGCGCCCCGACTTT 59.856 57.895 4.18 0.00 0.00 2.66
70 71 0.462047 CTCTATGCGCCCCGACTTTT 60.462 55.000 4.18 0.00 0.00 2.27
71 72 0.461339 TCTATGCGCCCCGACTTTTC 60.461 55.000 4.18 0.00 0.00 2.29
72 73 1.436983 CTATGCGCCCCGACTTTTCC 61.437 60.000 4.18 0.00 0.00 3.13
76 77 3.431725 GCCCCGACTTTTCCGCAG 61.432 66.667 0.00 0.00 0.00 5.18
89 90 4.320928 CGCAGGCCGTTTTTCGCA 62.321 61.111 0.00 0.00 38.35 5.10
90 91 2.429069 GCAGGCCGTTTTTCGCAG 60.429 61.111 0.00 0.00 38.35 5.18
91 92 2.429069 CAGGCCGTTTTTCGCAGC 60.429 61.111 0.00 0.00 38.35 5.25
92 93 4.025401 AGGCCGTTTTTCGCAGCG 62.025 61.111 9.06 9.06 38.35 5.18
113 114 2.364243 CGATGCGCAATCTGAAGAAG 57.636 50.000 17.11 0.00 32.61 2.85
114 115 1.594034 CGATGCGCAATCTGAAGAAGC 60.594 52.381 17.11 0.00 32.61 3.86
116 117 1.061570 GCGCAATCTGAAGAAGCGG 59.938 57.895 23.14 11.36 45.91 5.52
117 118 1.061570 CGCAATCTGAAGAAGCGGC 59.938 57.895 17.60 0.00 43.80 6.53
118 119 1.364626 CGCAATCTGAAGAAGCGGCT 61.365 55.000 17.60 0.00 43.80 5.52
119 120 0.807496 GCAATCTGAAGAAGCGGCTT 59.193 50.000 16.36 16.36 0.00 4.35
120 121 1.200948 GCAATCTGAAGAAGCGGCTTT 59.799 47.619 17.51 0.94 0.00 3.51
121 122 2.730402 GCAATCTGAAGAAGCGGCTTTC 60.730 50.000 17.51 11.81 0.00 2.62
122 123 1.743996 ATCTGAAGAAGCGGCTTTCC 58.256 50.000 17.51 4.95 0.00 3.13
181 182 1.581447 CTTTGCTGGACGGAAAGGC 59.419 57.895 0.00 0.00 44.50 4.35
182 183 2.187599 CTTTGCTGGACGGAAAGGCG 62.188 60.000 0.00 0.00 44.50 5.52
186 187 3.952628 CTGGACGGAAAGGCGGGTC 62.953 68.421 0.00 0.00 0.00 4.46
194 195 0.879090 GAAAGGCGGGTCGATTTGTT 59.121 50.000 0.00 0.00 0.00 2.83
195 196 0.879090 AAAGGCGGGTCGATTTGTTC 59.121 50.000 0.00 0.00 0.00 3.18
196 197 0.036306 AAGGCGGGTCGATTTGTTCT 59.964 50.000 0.00 0.00 0.00 3.01
242 249 5.666474 AGAGTACCTATACTTAGCCTGGT 57.334 43.478 0.00 0.00 41.98 4.00
248 255 8.506083 AGTACCTATACTTAGCCTGGTTAGTTA 58.494 37.037 0.00 0.00 38.59 2.24
249 256 9.306777 GTACCTATACTTAGCCTGGTTAGTTAT 57.693 37.037 0.00 0.00 0.00 1.89
296 326 2.507484 TGGGTTCTGAACATGCTTCTG 58.493 47.619 21.01 0.97 0.00 3.02
300 330 3.316308 GGTTCTGAACATGCTTCTGTTGT 59.684 43.478 21.01 0.00 39.40 3.32
306 336 2.504367 ACATGCTTCTGTTGTGGGTAC 58.496 47.619 0.00 0.00 0.00 3.34
307 337 2.158682 ACATGCTTCTGTTGTGGGTACA 60.159 45.455 0.00 0.00 34.31 2.90
319 351 3.914426 GTGGGTACACAAGAGATGGAT 57.086 47.619 0.00 0.00 46.90 3.41
331 363 0.473326 AGATGGATGGCCTTCTCTGC 59.527 55.000 17.48 2.53 43.17 4.26
338 370 2.398803 GGCCTTCTCTGCCGATTTC 58.601 57.895 0.00 0.00 39.48 2.17
345 377 3.264897 CTGCCGATTTCGCCCTCG 61.265 66.667 0.00 0.00 38.18 4.63
351 383 1.221021 GATTTCGCCCTCGTTCCCT 59.779 57.895 0.00 0.00 36.96 4.20
364 396 1.671054 TTCCCTTCGCTTGCTTCGG 60.671 57.895 0.00 0.00 0.00 4.30
392 424 8.842358 ATAAATCCAACGAGTTCTTAGTTTGA 57.158 30.769 0.00 0.00 0.00 2.69
393 425 7.745620 AAATCCAACGAGTTCTTAGTTTGAT 57.254 32.000 0.00 0.00 33.50 2.57
394 426 6.969828 ATCCAACGAGTTCTTAGTTTGATC 57.030 37.500 0.00 0.00 28.23 2.92
395 427 4.921515 TCCAACGAGTTCTTAGTTTGATCG 59.078 41.667 0.00 0.00 35.00 3.69
404 436 8.378172 AGTTCTTAGTTTGATCGATGTTTGAA 57.622 30.769 0.54 0.00 0.00 2.69
406 438 6.817396 TCTTAGTTTGATCGATGTTTGAACG 58.183 36.000 0.54 0.00 0.00 3.95
410 442 7.539712 AGTTTGATCGATGTTTGAACGATAT 57.460 32.000 0.54 0.00 44.73 1.63
420 452 7.434307 CGATGTTTGAACGATATAGTACTGGTT 59.566 37.037 5.39 1.98 0.00 3.67
466 498 3.994204 GGGACGGTTATGTTGTTGTTT 57.006 42.857 0.00 0.00 0.00 2.83
668 704 1.068127 GGCTGGTCCATGAATGAATGC 59.932 52.381 0.00 0.00 34.01 3.56
687 723 7.035004 TGAATGCCTATTGATTGTTAAACAGC 58.965 34.615 0.00 0.00 0.00 4.40
703 739 1.081892 CAGCCATCCGACTCAACTTG 58.918 55.000 0.00 0.00 0.00 3.16
715 833 0.535780 TCAACTTGCCAGTCAGCCTG 60.536 55.000 0.00 0.00 41.15 4.85
716 834 0.535780 CAACTTGCCAGTCAGCCTGA 60.536 55.000 0.00 0.00 44.49 3.86
717 835 0.250640 AACTTGCCAGTCAGCCTGAG 60.251 55.000 0.00 0.00 44.49 3.35
718 836 1.123861 ACTTGCCAGTCAGCCTGAGA 61.124 55.000 0.00 0.00 44.49 3.27
719 837 0.391395 CTTGCCAGTCAGCCTGAGAG 60.391 60.000 0.00 0.00 44.49 3.20
720 838 0.833409 TTGCCAGTCAGCCTGAGAGA 60.833 55.000 0.00 0.00 44.49 3.10
851 969 5.603813 AGTGCATTGGCCCAATTTCTTATAT 59.396 36.000 6.14 0.00 40.13 0.86
858 976 7.387265 TGGCCCAATTTCTTATATCAGACTA 57.613 36.000 0.00 0.00 0.00 2.59
931 1058 3.384168 TGGTCTGCCCTATACATGTCTT 58.616 45.455 0.00 0.00 0.00 3.01
932 1059 3.134623 TGGTCTGCCCTATACATGTCTTG 59.865 47.826 0.00 0.00 0.00 3.02
933 1060 3.495100 GGTCTGCCCTATACATGTCTTGG 60.495 52.174 0.00 2.78 0.00 3.61
934 1061 3.388024 GTCTGCCCTATACATGTCTTGGA 59.612 47.826 12.27 0.00 0.00 3.53
935 1062 4.040952 GTCTGCCCTATACATGTCTTGGAT 59.959 45.833 12.27 0.00 32.06 3.41
936 1063 5.246203 GTCTGCCCTATACATGTCTTGGATA 59.754 44.000 12.27 0.00 29.21 2.59
937 1064 6.025539 TCTGCCCTATACATGTCTTGGATAT 58.974 40.000 12.27 0.00 30.48 1.63
938 1065 6.155221 TCTGCCCTATACATGTCTTGGATATC 59.845 42.308 12.27 0.00 30.48 1.63
939 1066 5.784906 TGCCCTATACATGTCTTGGATATCA 59.215 40.000 12.27 3.64 30.48 2.15
940 1067 6.272090 TGCCCTATACATGTCTTGGATATCAA 59.728 38.462 12.27 0.00 30.48 2.57
967 1094 9.283768 TGGATATCATATTGTTTGACATACCAC 57.716 33.333 4.83 0.00 0.00 4.16
996 1123 3.182967 CACAGTGAGCTCGAAATACCTC 58.817 50.000 9.64 0.00 0.00 3.85
1008 1135 4.045104 CGAAATACCTCAAGATGTCGGAG 58.955 47.826 0.00 0.00 0.00 4.63
1022 1149 0.897621 TCGGAGCATTCTGAGAGCAA 59.102 50.000 6.26 0.00 33.76 3.91
1056 1183 3.138839 TCATGGGCAACATCATGGATACT 59.861 43.478 0.00 0.00 40.63 2.12
1257 1389 3.694566 AGTGTACGTCATCTGCTCATGTA 59.305 43.478 0.00 0.00 0.00 2.29
1265 1397 6.256539 ACGTCATCTGCTCATGTATTTACTTG 59.743 38.462 0.00 0.00 33.95 3.16
1300 1432 2.174360 GGGCATTTCTGAGGCTTTTCT 58.826 47.619 0.00 0.00 0.00 2.52
1443 1575 6.767456 ACAATCATTTCATTTGCCCTTGTTA 58.233 32.000 0.00 0.00 0.00 2.41
1764 1897 5.657470 ATTCCGTCATTGTGATCATTACG 57.343 39.130 0.00 5.11 0.00 3.18
1816 2321 6.121776 TCCTGTATGTGGAAATACTGTGTT 57.878 37.500 0.00 0.00 34.66 3.32
1832 2337 5.132502 ACTGTGTTTGTTCATCATCAGGAA 58.867 37.500 0.00 0.00 0.00 3.36
1833 2338 5.240183 ACTGTGTTTGTTCATCATCAGGAAG 59.760 40.000 0.00 0.00 0.00 3.46
1850 2355 2.032799 GGAAGTGTTTTGATGTCACGCA 59.967 45.455 0.00 0.00 37.20 5.24
1955 2460 3.251571 GGTAAGACCGTAAGAAGCTGTG 58.748 50.000 0.00 0.00 43.02 3.66
1974 2481 2.027745 GTGGCCTCTCATTTCTCTGACA 60.028 50.000 3.32 0.00 0.00 3.58
2038 2550 8.007152 CGCGAATGCATGTATTAACTTGTATTA 58.993 33.333 9.16 0.00 42.26 0.98
2236 2750 4.564769 GGAACAAGAAGAGCGAGTAGATTG 59.435 45.833 0.00 0.00 0.00 2.67
2237 2751 5.392767 AACAAGAAGAGCGAGTAGATTGA 57.607 39.130 0.00 0.00 0.00 2.57
2238 2752 5.590530 ACAAGAAGAGCGAGTAGATTGAT 57.409 39.130 0.00 0.00 0.00 2.57
2279 2794 6.591001 TCATGATTTATCGAGTGAAATCCCA 58.409 36.000 19.52 9.36 40.04 4.37
2284 2799 5.808366 TTATCGAGTGAAATCCCAGCTAT 57.192 39.130 0.00 0.00 0.00 2.97
2285 2800 4.696479 ATCGAGTGAAATCCCAGCTATT 57.304 40.909 0.00 0.00 0.00 1.73
2286 2801 5.808366 ATCGAGTGAAATCCCAGCTATTA 57.192 39.130 0.00 0.00 0.00 0.98
2287 2802 5.808366 TCGAGTGAAATCCCAGCTATTAT 57.192 39.130 0.00 0.00 0.00 1.28
2333 2848 3.643763 CAGACCTGTAGTGTGTCTCAAC 58.356 50.000 0.00 0.00 37.25 3.18
2347 2862 3.891366 TGTCTCAACTGTCATGTGAGAGA 59.109 43.478 13.37 9.02 37.62 3.10
2373 2888 0.514691 GCTCAAGTGCTTCCTGAACG 59.485 55.000 0.00 0.00 0.00 3.95
2421 2942 1.167851 CATGCGTCTGTTGTCCCATT 58.832 50.000 0.00 0.00 0.00 3.16
2422 2943 1.541147 CATGCGTCTGTTGTCCCATTT 59.459 47.619 0.00 0.00 0.00 2.32
2423 2944 2.552599 TGCGTCTGTTGTCCCATTTA 57.447 45.000 0.00 0.00 0.00 1.40
2429 2950 6.824196 TGCGTCTGTTGTCCCATTTATTATTA 59.176 34.615 0.00 0.00 0.00 0.98
2450 2971 0.961019 TGGGATGCTGCTCAACAAAC 59.039 50.000 0.00 0.00 0.00 2.93
2485 3007 8.849168 CCAGAAGTTGTATGCATATATTGGAAA 58.151 33.333 10.16 0.00 0.00 3.13
2493 3015 8.517056 TGTATGCATATATTGGAAATTGAGCTG 58.483 33.333 10.16 0.00 0.00 4.24
2498 3020 9.136952 GCATATATTGGAAATTGAGCTGAAATC 57.863 33.333 0.00 0.00 0.00 2.17
2501 3023 2.164219 TGGAAATTGAGCTGAAATCCGC 59.836 45.455 13.70 0.00 0.00 5.54
2514 3036 1.317613 AATCCGCTGTGCTTTGTCAA 58.682 45.000 0.00 0.00 0.00 3.18
2518 3040 1.587946 CCGCTGTGCTTTGTCAAAAAC 59.412 47.619 0.00 2.17 0.00 2.43
2519 3041 1.587946 CGCTGTGCTTTGTCAAAAACC 59.412 47.619 0.00 0.00 0.00 3.27
2520 3042 2.615869 GCTGTGCTTTGTCAAAAACCA 58.384 42.857 0.00 0.00 0.00 3.67
2521 3043 3.197265 GCTGTGCTTTGTCAAAAACCAT 58.803 40.909 0.00 0.00 0.00 3.55
2522 3044 3.001533 GCTGTGCTTTGTCAAAAACCATG 59.998 43.478 0.00 0.00 0.00 3.66
2523 3045 4.183101 CTGTGCTTTGTCAAAAACCATGT 58.817 39.130 0.00 0.00 0.00 3.21
2524 3046 4.573900 TGTGCTTTGTCAAAAACCATGTT 58.426 34.783 0.00 0.00 0.00 2.71
2525 3047 4.629200 TGTGCTTTGTCAAAAACCATGTTC 59.371 37.500 0.00 0.00 0.00 3.18
2526 3048 4.033932 GTGCTTTGTCAAAAACCATGTTCC 59.966 41.667 0.00 0.00 0.00 3.62
2527 3049 3.559655 GCTTTGTCAAAAACCATGTTCCC 59.440 43.478 0.00 0.00 0.00 3.97
2528 3050 3.444703 TTGTCAAAAACCATGTTCCCG 57.555 42.857 0.00 0.00 0.00 5.14
2529 3051 1.067821 TGTCAAAAACCATGTTCCCGC 59.932 47.619 0.00 0.00 0.00 6.13
2530 3052 0.312416 TCAAAAACCATGTTCCCGCG 59.688 50.000 0.00 0.00 0.00 6.46
2531 3053 0.312416 CAAAAACCATGTTCCCGCGA 59.688 50.000 8.23 0.00 0.00 5.87
2532 3054 0.596082 AAAAACCATGTTCCCGCGAG 59.404 50.000 8.23 0.00 0.00 5.03
2544 3066 4.110493 CGCGAGGAACCAGGATTC 57.890 61.111 0.00 0.00 0.00 2.52
2545 3067 1.517832 CGCGAGGAACCAGGATTCT 59.482 57.895 0.00 0.00 0.00 2.40
2548 3070 1.066143 GCGAGGAACCAGGATTCTTCA 60.066 52.381 0.00 0.00 35.08 3.02
2551 3073 3.447586 CGAGGAACCAGGATTCTTCACTA 59.552 47.826 0.00 0.00 35.08 2.74
2552 3074 4.081642 CGAGGAACCAGGATTCTTCACTAA 60.082 45.833 0.00 0.00 35.08 2.24
2567 3089 7.815840 TCTTCACTAACATGTCCAAATTTGA 57.184 32.000 19.86 0.00 0.00 2.69
2571 3093 8.408043 TCACTAACATGTCCAAATTTGAGATT 57.592 30.769 19.86 8.53 0.00 2.40
2573 3095 8.084073 CACTAACATGTCCAAATTTGAGATTGT 58.916 33.333 19.86 16.61 0.00 2.71
2614 3139 2.715046 ACGATCCACATTCATGCTGTT 58.285 42.857 0.00 0.00 0.00 3.16
2616 3141 2.286008 CGATCCACATTCATGCTGTTCG 60.286 50.000 0.00 3.24 0.00 3.95
2668 3194 2.749621 CTGGTCAAAGGGTGCAGATTAC 59.250 50.000 0.00 0.00 0.00 1.89
2669 3195 2.107378 TGGTCAAAGGGTGCAGATTACA 59.893 45.455 0.00 0.00 0.00 2.41
2751 3283 1.450134 CGGCATGCACCTTGAGCTA 60.450 57.895 21.36 0.00 0.00 3.32
2755 3287 1.676916 GCATGCACCTTGAGCTACTGA 60.677 52.381 14.21 0.00 0.00 3.41
2815 3347 0.107508 AGCTCACCATGATCCAACCG 60.108 55.000 0.00 0.00 0.00 4.44
2858 3391 5.461032 AGCTAGCTCGCTATAAAATCTGT 57.539 39.130 12.68 0.00 38.76 3.41
2865 3398 5.531122 TCGCTATAAAATCTGTACTGCCT 57.469 39.130 0.00 0.00 0.00 4.75
3018 3556 4.148825 GCGCCTCCTCCACGACAT 62.149 66.667 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.521224 ATCGTACCGAGGAGGGGC 60.521 66.667 0.00 0.00 46.96 5.80
13 14 0.890090 GAGATCGTACCGAGGAGGGG 60.890 65.000 0.00 0.00 46.96 4.79
14 15 0.108963 AGAGATCGTACCGAGGAGGG 59.891 60.000 0.00 0.00 46.96 4.30
16 17 2.409975 GAGAGAGATCGTACCGAGGAG 58.590 57.143 0.00 0.00 39.91 3.69
17 18 1.070445 GGAGAGAGATCGTACCGAGGA 59.930 57.143 0.00 0.00 39.91 3.71
18 19 1.515081 GGAGAGAGATCGTACCGAGG 58.485 60.000 0.00 0.00 39.91 4.63
19 20 1.141645 CGGAGAGAGATCGTACCGAG 58.858 60.000 11.98 0.00 42.40 4.63
20 21 0.249784 CCGGAGAGAGATCGTACCGA 60.250 60.000 16.59 0.00 42.40 4.69
21 22 1.843734 GCCGGAGAGAGATCGTACCG 61.844 65.000 5.05 0.00 40.03 4.02
22 23 1.843734 CGCCGGAGAGAGATCGTACC 61.844 65.000 5.05 0.00 0.00 3.34
23 24 1.570475 CGCCGGAGAGAGATCGTAC 59.430 63.158 5.05 0.00 0.00 3.67
24 25 1.597302 CCGCCGGAGAGAGATCGTA 60.597 63.158 5.05 0.00 0.00 3.43
25 26 2.902846 CCGCCGGAGAGAGATCGT 60.903 66.667 5.05 0.00 0.00 3.73
26 27 4.335584 GCCGCCGGAGAGAGATCG 62.336 72.222 7.68 0.00 0.00 3.69
27 28 2.909965 AGCCGCCGGAGAGAGATC 60.910 66.667 7.68 0.00 0.00 2.75
28 29 2.909965 GAGCCGCCGGAGAGAGAT 60.910 66.667 7.68 0.00 0.00 2.75
29 30 4.116585 AGAGCCGCCGGAGAGAGA 62.117 66.667 7.68 0.00 0.00 3.10
30 31 3.591835 GAGAGCCGCCGGAGAGAG 61.592 72.222 7.68 0.00 0.00 3.20
43 44 1.081509 GGCGCATAGAGCTCGAGAG 60.082 63.158 18.75 5.33 42.61 3.20
44 45 2.556459 GGGCGCATAGAGCTCGAGA 61.556 63.158 18.75 0.00 42.61 4.04
45 46 2.049618 GGGCGCATAGAGCTCGAG 60.050 66.667 10.83 8.45 42.61 4.04
46 47 3.606662 GGGGCGCATAGAGCTCGA 61.607 66.667 10.83 2.79 42.61 4.04
48 49 3.606662 TCGGGGCGCATAGAGCTC 61.607 66.667 10.83 5.27 42.61 4.09
49 50 3.917760 GTCGGGGCGCATAGAGCT 61.918 66.667 10.83 0.00 42.61 4.09
50 51 2.925162 AAAGTCGGGGCGCATAGAGC 62.925 60.000 10.83 0.26 40.87 4.09
51 52 0.462047 AAAAGTCGGGGCGCATAGAG 60.462 55.000 10.83 0.00 0.00 2.43
52 53 0.461339 GAAAAGTCGGGGCGCATAGA 60.461 55.000 10.83 1.00 0.00 1.98
53 54 1.436983 GGAAAAGTCGGGGCGCATAG 61.437 60.000 10.83 0.00 0.00 2.23
54 55 1.450669 GGAAAAGTCGGGGCGCATA 60.451 57.895 10.83 0.00 0.00 3.14
55 56 2.750237 GGAAAAGTCGGGGCGCAT 60.750 61.111 10.83 0.00 0.00 4.73
59 60 3.431725 CTGCGGAAAAGTCGGGGC 61.432 66.667 0.00 0.00 0.00 5.80
60 61 2.746277 CCTGCGGAAAAGTCGGGG 60.746 66.667 0.00 0.00 0.00 5.73
61 62 3.431725 GCCTGCGGAAAAGTCGGG 61.432 66.667 0.00 0.00 0.00 5.14
62 63 3.431725 GGCCTGCGGAAAAGTCGG 61.432 66.667 0.00 0.00 0.00 4.79
63 64 3.788766 CGGCCTGCGGAAAAGTCG 61.789 66.667 0.00 0.00 0.00 4.18
64 65 1.792118 AAACGGCCTGCGGAAAAGTC 61.792 55.000 0.00 0.00 0.00 3.01
65 66 1.388837 AAAACGGCCTGCGGAAAAGT 61.389 50.000 0.00 0.00 0.00 2.66
66 67 0.249280 AAAAACGGCCTGCGGAAAAG 60.249 50.000 0.00 0.00 0.00 2.27
67 68 0.249114 GAAAAACGGCCTGCGGAAAA 60.249 50.000 0.00 0.00 0.00 2.29
68 69 1.360911 GAAAAACGGCCTGCGGAAA 59.639 52.632 0.00 0.00 0.00 3.13
69 70 2.899044 CGAAAAACGGCCTGCGGAA 61.899 57.895 0.00 0.00 38.46 4.30
70 71 3.350612 CGAAAAACGGCCTGCGGA 61.351 61.111 0.00 0.00 38.46 5.54
72 73 4.320928 TGCGAAAAACGGCCTGCG 62.321 61.111 0.00 0.00 42.83 5.18
73 74 2.429069 CTGCGAAAAACGGCCTGC 60.429 61.111 0.00 0.00 42.83 4.85
74 75 2.429069 GCTGCGAAAAACGGCCTG 60.429 61.111 0.00 0.00 42.83 4.85
75 76 4.025401 CGCTGCGAAAAACGGCCT 62.025 61.111 18.66 0.00 42.83 5.19
94 95 1.594034 GCTTCTTCAGATTGCGCATCG 60.594 52.381 12.75 7.92 36.93 3.84
95 96 1.594034 CGCTTCTTCAGATTGCGCATC 60.594 52.381 12.75 11.39 39.21 3.91
96 97 0.376152 CGCTTCTTCAGATTGCGCAT 59.624 50.000 12.75 0.40 39.21 4.73
97 98 1.638388 CCGCTTCTTCAGATTGCGCA 61.638 55.000 5.66 5.66 42.03 6.09
98 99 1.061570 CCGCTTCTTCAGATTGCGC 59.938 57.895 0.00 0.00 42.03 6.09
99 100 1.061570 GCCGCTTCTTCAGATTGCG 59.938 57.895 14.18 14.18 42.56 4.85
100 101 0.807496 AAGCCGCTTCTTCAGATTGC 59.193 50.000 0.00 0.00 0.00 3.56
101 102 2.159462 GGAAAGCCGCTTCTTCAGATTG 60.159 50.000 5.98 0.00 0.00 2.67
102 103 2.087646 GGAAAGCCGCTTCTTCAGATT 58.912 47.619 5.98 0.00 0.00 2.40
103 104 1.743996 GGAAAGCCGCTTCTTCAGAT 58.256 50.000 5.98 0.00 0.00 2.90
104 105 3.233355 GGAAAGCCGCTTCTTCAGA 57.767 52.632 5.98 0.00 0.00 3.27
119 120 9.752228 AGGGGTAAAAATTAACTATAAACGGAA 57.248 29.630 0.00 0.00 0.00 4.30
120 121 9.752228 AAGGGGTAAAAATTAACTATAAACGGA 57.248 29.630 0.00 0.00 0.00 4.69
121 122 9.791820 CAAGGGGTAAAAATTAACTATAAACGG 57.208 33.333 0.00 0.00 0.00 4.44
127 128 8.248253 CGCTTTCAAGGGGTAAAAATTAACTAT 58.752 33.333 0.00 0.00 35.54 2.12
128 129 7.447853 TCGCTTTCAAGGGGTAAAAATTAACTA 59.552 33.333 3.97 0.00 39.25 2.24
129 130 6.265876 TCGCTTTCAAGGGGTAAAAATTAACT 59.734 34.615 3.97 0.00 39.25 2.24
130 131 6.448852 TCGCTTTCAAGGGGTAAAAATTAAC 58.551 36.000 3.97 0.00 39.25 2.01
131 132 6.651975 TCGCTTTCAAGGGGTAAAAATTAA 57.348 33.333 3.97 0.00 39.25 1.40
132 133 6.844097 ATCGCTTTCAAGGGGTAAAAATTA 57.156 33.333 3.97 0.00 39.25 1.40
133 134 5.738619 ATCGCTTTCAAGGGGTAAAAATT 57.261 34.783 3.97 0.00 39.25 1.82
134 135 6.184789 TCTATCGCTTTCAAGGGGTAAAAAT 58.815 36.000 3.97 0.00 39.25 1.82
135 136 5.562635 TCTATCGCTTTCAAGGGGTAAAAA 58.437 37.500 3.97 0.00 39.25 1.94
136 137 5.168647 TCTATCGCTTTCAAGGGGTAAAA 57.831 39.130 3.97 0.00 39.25 1.52
137 138 4.766375 CTCTATCGCTTTCAAGGGGTAAA 58.234 43.478 3.97 0.00 39.25 2.01
138 139 3.431766 GCTCTATCGCTTTCAAGGGGTAA 60.432 47.826 3.97 0.00 39.25 2.85
139 140 2.102588 GCTCTATCGCTTTCAAGGGGTA 59.897 50.000 3.97 0.65 39.25 3.69
140 141 1.134371 GCTCTATCGCTTTCAAGGGGT 60.134 52.381 3.97 0.00 39.25 4.95
141 142 1.587547 GCTCTATCGCTTTCAAGGGG 58.412 55.000 3.97 0.00 39.25 4.79
142 143 1.212616 CGCTCTATCGCTTTCAAGGG 58.787 55.000 0.00 0.00 40.04 3.95
143 144 1.212616 CCGCTCTATCGCTTTCAAGG 58.787 55.000 0.00 0.00 0.00 3.61
180 181 2.095372 CCTAAAGAACAAATCGACCCGC 59.905 50.000 0.00 0.00 0.00 6.13
181 182 3.592059 TCCTAAAGAACAAATCGACCCG 58.408 45.455 0.00 0.00 0.00 5.28
182 183 7.046033 TCTTATCCTAAAGAACAAATCGACCC 58.954 38.462 0.00 0.00 32.59 4.46
213 220 9.712250 AGGCTAAGTATAGGTACTCTAAAGTTT 57.288 33.333 0.00 0.00 40.24 2.66
214 221 9.134055 CAGGCTAAGTATAGGTACTCTAAAGTT 57.866 37.037 0.00 0.00 40.24 2.66
215 222 7.724951 CCAGGCTAAGTATAGGTACTCTAAAGT 59.275 40.741 0.00 0.00 40.24 2.66
216 223 7.724951 ACCAGGCTAAGTATAGGTACTCTAAAG 59.275 40.741 0.00 0.00 40.24 1.85
217 224 7.589993 ACCAGGCTAAGTATAGGTACTCTAAA 58.410 38.462 0.00 0.00 40.24 1.85
218 225 7.159201 ACCAGGCTAAGTATAGGTACTCTAA 57.841 40.000 0.00 0.00 40.24 2.10
219 226 6.776887 ACCAGGCTAAGTATAGGTACTCTA 57.223 41.667 0.00 0.00 40.24 2.43
220 227 5.666474 ACCAGGCTAAGTATAGGTACTCT 57.334 43.478 0.00 0.00 40.24 3.24
221 228 7.003482 ACTAACCAGGCTAAGTATAGGTACTC 58.997 42.308 0.00 0.00 40.24 2.59
223 230 7.594351 AACTAACCAGGCTAAGTATAGGTAC 57.406 40.000 0.00 0.00 0.00 3.34
224 231 9.887862 AATAACTAACCAGGCTAAGTATAGGTA 57.112 33.333 0.00 0.00 0.00 3.08
259 266 2.437281 ACCCATCTGCTAATCCAGTCAG 59.563 50.000 0.00 0.00 34.47 3.51
261 268 3.135530 AGAACCCATCTGCTAATCCAGTC 59.864 47.826 0.00 0.00 36.88 3.51
262 269 3.118531 AGAACCCATCTGCTAATCCAGT 58.881 45.455 0.00 0.00 36.88 4.00
263 270 3.853355 AGAACCCATCTGCTAATCCAG 57.147 47.619 0.00 0.00 36.88 3.86
287 317 2.226437 GTGTACCCACAACAGAAGCATG 59.774 50.000 0.00 0.00 41.44 4.06
300 330 2.505407 CCATCCATCTCTTGTGTACCCA 59.495 50.000 0.00 0.00 0.00 4.51
306 336 2.092538 AGAAGGCCATCCATCTCTTGTG 60.093 50.000 5.01 0.00 35.65 3.33
307 337 2.203584 AGAAGGCCATCCATCTCTTGT 58.796 47.619 5.01 0.00 35.65 3.16
331 363 2.171725 GGAACGAGGGCGAAATCGG 61.172 63.158 4.84 0.00 43.12 4.18
345 377 1.497722 CGAAGCAAGCGAAGGGAAC 59.502 57.895 0.00 0.00 0.00 3.62
364 396 7.073342 ACTAAGAACTCGTTGGATTTATTGC 57.927 36.000 0.00 0.00 0.00 3.56
369 401 7.360101 CGATCAAACTAAGAACTCGTTGGATTT 60.360 37.037 0.00 0.00 32.85 2.17
392 424 7.808381 CCAGTACTATATCGTTCAAACATCGAT 59.192 37.037 0.00 0.00 44.53 3.59
393 425 7.136772 CCAGTACTATATCGTTCAAACATCGA 58.863 38.462 0.00 0.00 37.96 3.59
394 426 6.916387 ACCAGTACTATATCGTTCAAACATCG 59.084 38.462 0.00 0.00 0.00 3.84
395 427 8.644318 AACCAGTACTATATCGTTCAAACATC 57.356 34.615 0.00 0.00 0.00 3.06
404 436 8.921205 ACCAGATAAAAACCAGTACTATATCGT 58.079 33.333 0.00 0.00 0.00 3.73
420 452 7.148540 CGTTCAACCGAATCTAACCAGATAAAA 60.149 37.037 0.00 0.00 40.81 1.52
428 460 2.004733 CCCGTTCAACCGAATCTAACC 58.995 52.381 0.00 0.00 32.61 2.85
466 498 2.937519 TGTACCACCAAAATCACTGCA 58.062 42.857 0.00 0.00 0.00 4.41
614 647 2.542020 TCTGACCAACGCTTTCATCA 57.458 45.000 0.00 0.00 0.00 3.07
615 648 3.896648 TTTCTGACCAACGCTTTCATC 57.103 42.857 0.00 0.00 0.00 2.92
616 649 3.820467 TCATTTCTGACCAACGCTTTCAT 59.180 39.130 0.00 0.00 0.00 2.57
668 704 6.507023 GGATGGCTGTTTAACAATCAATAGG 58.493 40.000 9.54 0.00 0.00 2.57
687 723 0.321564 TGGCAAGTTGAGTCGGATGG 60.322 55.000 7.16 0.00 0.00 3.51
715 833 4.013728 TGTTTGCTAGGACTCTCTCTCTC 58.986 47.826 0.00 0.00 0.00 3.20
716 834 4.016444 CTGTTTGCTAGGACTCTCTCTCT 58.984 47.826 0.00 0.00 0.00 3.10
717 835 3.761752 ACTGTTTGCTAGGACTCTCTCTC 59.238 47.826 0.00 0.00 0.00 3.20
718 836 3.773560 ACTGTTTGCTAGGACTCTCTCT 58.226 45.455 0.00 0.00 0.00 3.10
719 837 5.646577 TTACTGTTTGCTAGGACTCTCTC 57.353 43.478 0.00 0.00 0.00 3.20
720 838 7.178628 TGTTATTACTGTTTGCTAGGACTCTCT 59.821 37.037 0.00 0.00 0.00 3.10
805 923 9.405587 GCACTTTGCTTTGACATACTTTATTTA 57.594 29.630 0.00 0.00 40.96 1.40
806 924 7.925483 TGCACTTTGCTTTGACATACTTTATTT 59.075 29.630 0.00 0.00 45.31 1.40
807 925 7.432869 TGCACTTTGCTTTGACATACTTTATT 58.567 30.769 0.00 0.00 45.31 1.40
808 926 6.980593 TGCACTTTGCTTTGACATACTTTAT 58.019 32.000 0.00 0.00 45.31 1.40
887 1006 1.701847 AGCATATACAGGGAAGCAGGG 59.298 52.381 0.00 0.00 0.00 4.45
952 1079 4.263156 GGAGTAGGGTGGTATGTCAAACAA 60.263 45.833 0.00 0.00 0.00 2.83
967 1094 0.820871 GAGCTCACTGTGGAGTAGGG 59.179 60.000 9.40 0.00 37.24 3.53
996 1123 2.864946 CTCAGAATGCTCCGACATCTTG 59.135 50.000 0.00 0.00 34.76 3.02
1008 1135 0.733729 CAGCCTTGCTCTCAGAATGC 59.266 55.000 0.00 0.00 36.40 3.56
1056 1183 0.913934 TGGGGAGCCTGTCAGCAATA 60.914 55.000 0.00 0.00 34.23 1.90
1265 1397 0.383949 TGCCCACAAGAAGAAAACGC 59.616 50.000 0.00 0.00 0.00 4.84
1300 1432 7.094248 ACACATCAGCAGCTACAATGATAAAAA 60.094 33.333 15.21 0.00 31.35 1.94
1443 1575 3.966665 ACAAACTGAACCACCATTCCAAT 59.033 39.130 0.00 0.00 0.00 3.16
1516 1648 2.483877 TGCTATGTTGCTGAAAAGGACG 59.516 45.455 0.00 0.00 0.00 4.79
1561 1693 6.585695 ATTTCAGAAGACCTACGTGTAGAA 57.414 37.500 8.59 0.00 35.21 2.10
1568 1700 3.490419 CGGGGTATTTCAGAAGACCTACG 60.490 52.174 13.48 13.71 44.70 3.51
1792 2297 6.121776 ACACAGTATTTCCACATACAGGAA 57.878 37.500 0.00 0.00 43.13 3.36
1798 2303 7.809546 TGAACAAACACAGTATTTCCACATA 57.190 32.000 0.00 0.00 0.00 2.29
1816 2321 6.320926 TCAAAACACTTCCTGATGATGAACAA 59.679 34.615 0.00 0.00 0.00 2.83
1832 2337 3.066621 ACATTGCGTGACATCAAAACACT 59.933 39.130 0.00 0.00 33.13 3.55
1833 2338 3.371168 ACATTGCGTGACATCAAAACAC 58.629 40.909 0.00 0.00 0.00 3.32
1850 2355 7.718753 TCCAACAATTGCCTGAAATAAAACATT 59.281 29.630 5.05 0.00 0.00 2.71
1955 2460 3.557228 ATGTCAGAGAAATGAGAGGCC 57.443 47.619 0.00 0.00 0.00 5.19
2038 2550 6.395629 CAGGTGATCAGAAAATGCTTTCATT 58.604 36.000 0.00 0.00 42.99 2.57
2045 2557 3.507233 TGTTCCAGGTGATCAGAAAATGC 59.493 43.478 0.00 0.00 0.00 3.56
2206 2720 2.289072 CGCTCTTCTTGTTCCTCTTGGA 60.289 50.000 0.00 0.00 41.36 3.53
2236 2750 6.990798 TCATGAGTGTCCATCTGATCTAATC 58.009 40.000 0.00 0.00 0.00 1.75
2237 2751 6.990908 TCATGAGTGTCCATCTGATCTAAT 57.009 37.500 0.00 0.00 0.00 1.73
2238 2752 6.990908 ATCATGAGTGTCCATCTGATCTAA 57.009 37.500 0.09 0.00 0.00 2.10
2279 2794 9.853177 ACAAACTAGGCAGAATAAATAATAGCT 57.147 29.630 0.00 0.00 0.00 3.32
2284 2799 7.393234 AGCACACAAACTAGGCAGAATAAATAA 59.607 33.333 0.00 0.00 0.00 1.40
2285 2800 6.884295 AGCACACAAACTAGGCAGAATAAATA 59.116 34.615 0.00 0.00 0.00 1.40
2286 2801 5.711976 AGCACACAAACTAGGCAGAATAAAT 59.288 36.000 0.00 0.00 0.00 1.40
2287 2802 5.048782 CAGCACACAAACTAGGCAGAATAAA 60.049 40.000 0.00 0.00 0.00 1.40
2333 2848 3.124806 GCACACATTCTCTCACATGACAG 59.875 47.826 0.00 0.00 0.00 3.51
2347 2862 1.610522 GGAAGCACTTGAGCACACATT 59.389 47.619 0.00 0.00 36.85 2.71
2373 2888 3.985279 GGTTGAATTTAAACCAGCGTTCC 59.015 43.478 10.39 0.00 45.41 3.62
2421 2942 6.186420 TGAGCAGCATCCCACTAATAATAA 57.814 37.500 0.00 0.00 0.00 1.40
2422 2943 5.823861 TGAGCAGCATCCCACTAATAATA 57.176 39.130 0.00 0.00 0.00 0.98
2423 2944 4.712051 TGAGCAGCATCCCACTAATAAT 57.288 40.909 0.00 0.00 0.00 1.28
2429 2950 0.111061 TTGTTGAGCAGCATCCCACT 59.889 50.000 0.00 0.00 0.00 4.00
2470 2992 7.770366 TCAGCTCAATTTCCAATATATGCAT 57.230 32.000 3.79 3.79 0.00 3.96
2485 3007 1.741706 CACAGCGGATTTCAGCTCAAT 59.258 47.619 2.07 0.00 45.29 2.57
2493 3015 1.266718 TGACAAAGCACAGCGGATTTC 59.733 47.619 0.00 0.00 0.00 2.17
2498 3020 1.587946 GTTTTTGACAAAGCACAGCGG 59.412 47.619 0.10 0.00 0.00 5.52
2501 3023 4.183101 ACATGGTTTTTGACAAAGCACAG 58.817 39.130 12.12 0.00 39.94 3.66
2514 3036 1.241315 CCTCGCGGGAACATGGTTTT 61.241 55.000 8.08 0.00 37.23 2.43
2524 3046 3.976490 ATCCTGGTTCCTCGCGGGA 62.976 63.158 8.08 10.34 43.41 5.14
2525 3047 2.925162 GAATCCTGGTTCCTCGCGGG 62.925 65.000 6.13 0.59 0.00 6.13
2526 3048 1.521681 GAATCCTGGTTCCTCGCGG 60.522 63.158 6.13 0.00 0.00 6.46
2527 3049 0.108138 AAGAATCCTGGTTCCTCGCG 60.108 55.000 0.00 0.00 0.00 5.87
2528 3050 1.066143 TGAAGAATCCTGGTTCCTCGC 60.066 52.381 0.00 0.00 0.00 5.03
2529 3051 2.234908 AGTGAAGAATCCTGGTTCCTCG 59.765 50.000 0.00 0.00 0.00 4.63
2530 3052 3.990959 AGTGAAGAATCCTGGTTCCTC 57.009 47.619 0.00 0.00 0.00 3.71
2531 3053 4.597507 TGTTAGTGAAGAATCCTGGTTCCT 59.402 41.667 0.00 0.00 0.00 3.36
2532 3054 4.906618 TGTTAGTGAAGAATCCTGGTTCC 58.093 43.478 0.00 0.00 0.00 3.62
2533 3055 5.940470 ACATGTTAGTGAAGAATCCTGGTTC 59.060 40.000 0.00 0.00 0.00 3.62
2534 3056 5.880901 ACATGTTAGTGAAGAATCCTGGTT 58.119 37.500 0.00 0.00 0.00 3.67
2535 3057 5.491982 GACATGTTAGTGAAGAATCCTGGT 58.508 41.667 0.00 0.00 0.00 4.00
2536 3058 4.878397 GGACATGTTAGTGAAGAATCCTGG 59.122 45.833 0.00 0.00 0.00 4.45
2537 3059 5.491070 TGGACATGTTAGTGAAGAATCCTG 58.509 41.667 0.00 0.00 0.00 3.86
2540 3062 9.132521 CAAATTTGGACATGTTAGTGAAGAATC 57.867 33.333 10.49 0.00 0.00 2.52
2544 3066 7.874940 TCTCAAATTTGGACATGTTAGTGAAG 58.125 34.615 17.90 3.28 0.00 3.02
2545 3067 7.815840 TCTCAAATTTGGACATGTTAGTGAA 57.184 32.000 17.90 0.00 0.00 3.18
2548 3070 8.084073 CACAATCTCAAATTTGGACATGTTAGT 58.916 33.333 17.90 3.65 0.00 2.24
2551 3073 7.053316 TCACAATCTCAAATTTGGACATGTT 57.947 32.000 17.90 3.60 0.00 2.71
2552 3074 6.653526 TCACAATCTCAAATTTGGACATGT 57.346 33.333 17.90 16.68 0.00 3.21
2581 3106 7.174080 TGAATGTGGATCGTAATCACAGAAAAA 59.826 33.333 7.62 0.00 33.21 1.94
2587 3112 4.273235 GCATGAATGTGGATCGTAATCACA 59.727 41.667 0.00 4.52 33.21 3.58
2589 3114 4.512571 CAGCATGAATGTGGATCGTAATCA 59.487 41.667 0.00 0.00 39.69 2.57
2594 3119 2.408271 ACAGCATGAATGTGGATCGT 57.592 45.000 0.00 0.00 39.69 3.73
2614 3139 1.035923 TGCAAGAAATTTGGGCACGA 58.964 45.000 0.00 0.00 0.00 4.35
2616 3141 3.434299 CAGAATGCAAGAAATTTGGGCAC 59.566 43.478 9.41 0.00 37.30 5.01
2668 3194 2.038952 TCTGACTCCCAAATCTGGTGTG 59.961 50.000 0.00 0.00 41.72 3.82
2669 3195 2.338809 TCTGACTCCCAAATCTGGTGT 58.661 47.619 0.00 0.00 41.72 4.16
2777 3309 0.326595 TGCCCTGCACTCCGATTTTA 59.673 50.000 0.00 0.00 31.71 1.52
2778 3310 0.962356 CTGCCCTGCACTCCGATTTT 60.962 55.000 0.00 0.00 33.79 1.82
2835 3367 5.465935 ACAGATTTTATAGCGAGCTAGCTC 58.534 41.667 31.12 31.12 45.67 4.09
2838 3370 6.306837 GCAGTACAGATTTTATAGCGAGCTAG 59.693 42.308 10.71 0.00 31.45 3.42
2841 3374 4.150804 GGCAGTACAGATTTTATAGCGAGC 59.849 45.833 0.00 0.00 0.00 5.03
2854 3387 0.680280 GGGAGACGAGGCAGTACAGA 60.680 60.000 0.00 0.00 0.00 3.41
2858 3391 0.680280 GAGTGGGAGACGAGGCAGTA 60.680 60.000 0.00 0.00 0.00 2.74
2865 3398 1.906824 GGTGGTGAGTGGGAGACGA 60.907 63.158 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.