Multiple sequence alignment - TraesCS5D01G426100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G426100 chr5D 100.000 2804 0 0 1 2804 484578414 484575611 0.000000e+00 5179.0
1 TraesCS5D01G426100 chr5D 93.750 48 3 0 2335 2382 543670754 543670707 3.870000e-09 73.1
2 TraesCS5D01G426100 chr5A 87.154 2024 125 45 1 1981 606162896 606160965 0.000000e+00 2172.0
3 TraesCS5D01G426100 chr5A 89.333 75 8 0 2486 2560 606160858 606160784 8.270000e-16 95.3
4 TraesCS5D01G426100 chr5A 97.778 45 0 1 2334 2377 540628427 540628471 3.000000e-10 76.8
5 TraesCS5D01G426100 chr5A 97.561 41 1 0 2334 2374 648529655 648529695 1.390000e-08 71.3
6 TraesCS5D01G426100 chr5B 85.811 1924 143 46 1 1888 595662467 595660638 0.000000e+00 1921.0
7 TraesCS5D01G426100 chr5B 85.789 190 17 9 2035 2222 595660458 595660277 2.850000e-45 193.0
8 TraesCS5D01G426100 chr2A 84.000 100 11 2 2458 2557 141506410 141506316 1.070000e-14 91.6
9 TraesCS5D01G426100 chr2A 100.000 42 0 0 2334 2375 10500740 10500699 8.330000e-11 78.7
10 TraesCS5D01G426100 chrUn 100.000 42 0 0 2334 2375 291828063 291828022 8.330000e-11 78.7
11 TraesCS5D01G426100 chr2D 100.000 42 0 0 2334 2375 534152244 534152285 8.330000e-11 78.7
12 TraesCS5D01G426100 chr2D 82.000 100 9 6 2458 2555 28425269 28425361 3.000000e-10 76.8
13 TraesCS5D01G426100 chr2D 85.333 75 10 1 2482 2556 542973647 542973720 3.000000e-10 76.8
14 TraesCS5D01G426100 chr2D 100.000 33 0 0 2522 2554 14800338 14800370 8.390000e-06 62.1
15 TraesCS5D01G426100 chr6B 90.000 60 5 1 2501 2560 184636269 184636327 3.000000e-10 76.8
16 TraesCS5D01G426100 chr4A 97.727 44 1 0 2334 2377 27686795 27686752 3.000000e-10 76.8
17 TraesCS5D01G426100 chr7A 93.750 48 3 0 2334 2381 243356800 243356753 3.870000e-09 73.1
18 TraesCS5D01G426100 chr3B 95.652 46 0 2 2331 2374 793376542 793376497 3.870000e-09 73.1
19 TraesCS5D01G426100 chr2B 81.443 97 9 8 2462 2555 143807462 143807552 1.390000e-08 71.3
20 TraesCS5D01G426100 chr4D 81.395 86 11 2 2470 2555 481578840 481578760 6.480000e-07 65.8
21 TraesCS5D01G426100 chr1D 100.000 31 0 0 2526 2556 42514862 42514892 1.080000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G426100 chr5D 484575611 484578414 2803 True 5179.00 5179 100.0000 1 2804 1 chr5D.!!$R1 2803
1 TraesCS5D01G426100 chr5A 606160784 606162896 2112 True 1133.65 2172 88.2435 1 2560 2 chr5A.!!$R1 2559
2 TraesCS5D01G426100 chr5B 595660277 595662467 2190 True 1057.00 1921 85.8000 1 2222 2 chr5B.!!$R1 2221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
969 1005 0.107508 AGCTCACCATGATCCAACCG 60.108 55.0 0.0 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 2064 0.041312 GCCAATAACACGGCGCATAG 60.041 55.0 10.83 1.82 38.82 2.23 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 3.251571 GGTAAGACCGTAAGAAGCTGTG 58.748 50.000 0.00 0.00 43.02 3.66
128 131 2.027745 GTGGCCTCTCATTTCTCTGACA 60.028 50.000 3.32 0.00 0.00 3.58
192 200 8.007152 CGCGAATGCATGTATTAACTTGTATTA 58.993 33.333 9.16 0.00 42.26 0.98
390 400 4.564769 GGAACAAGAAGAGCGAGTAGATTG 59.435 45.833 0.00 0.00 0.00 2.67
391 401 5.392767 AACAAGAAGAGCGAGTAGATTGA 57.607 39.130 0.00 0.00 0.00 2.57
392 402 5.590530 ACAAGAAGAGCGAGTAGATTGAT 57.409 39.130 0.00 0.00 0.00 2.57
433 444 6.591001 TCATGATTTATCGAGTGAAATCCCA 58.409 36.000 19.52 9.36 40.04 4.37
434 445 6.707608 TCATGATTTATCGAGTGAAATCCCAG 59.292 38.462 19.52 12.91 40.04 4.45
435 446 4.816385 TGATTTATCGAGTGAAATCCCAGC 59.184 41.667 19.52 4.47 40.04 4.85
436 447 4.487714 TTTATCGAGTGAAATCCCAGCT 57.512 40.909 0.00 0.00 0.00 4.24
437 448 5.607939 TTTATCGAGTGAAATCCCAGCTA 57.392 39.130 0.00 0.00 0.00 3.32
438 449 5.808366 TTATCGAGTGAAATCCCAGCTAT 57.192 39.130 0.00 0.00 0.00 2.97
439 450 4.696479 ATCGAGTGAAATCCCAGCTATT 57.304 40.909 0.00 0.00 0.00 1.73
440 451 5.808366 ATCGAGTGAAATCCCAGCTATTA 57.192 39.130 0.00 0.00 0.00 0.98
441 452 5.808366 TCGAGTGAAATCCCAGCTATTAT 57.192 39.130 0.00 0.00 0.00 1.28
442 453 6.174720 TCGAGTGAAATCCCAGCTATTATT 57.825 37.500 0.00 0.00 0.00 1.40
443 454 6.591935 TCGAGTGAAATCCCAGCTATTATTT 58.408 36.000 0.00 0.00 0.00 1.40
444 455 7.732025 TCGAGTGAAATCCCAGCTATTATTTA 58.268 34.615 0.00 0.00 0.00 1.40
487 506 3.643763 CAGACCTGTAGTGTGTCTCAAC 58.356 50.000 0.00 0.00 37.25 3.18
501 520 3.891366 TGTCTCAACTGTCATGTGAGAGA 59.109 43.478 13.37 9.02 37.62 3.10
527 546 0.514691 GCTCAAGTGCTTCCTGAACG 59.485 55.000 0.00 0.00 0.00 3.95
575 600 1.167851 CATGCGTCTGTTGTCCCATT 58.832 50.000 0.00 0.00 0.00 3.16
576 601 1.541147 CATGCGTCTGTTGTCCCATTT 59.459 47.619 0.00 0.00 0.00 2.32
577 602 2.552599 TGCGTCTGTTGTCCCATTTA 57.447 45.000 0.00 0.00 0.00 1.40
583 608 6.824196 TGCGTCTGTTGTCCCATTTATTATTA 59.176 34.615 0.00 0.00 0.00 0.98
604 629 0.961019 TGGGATGCTGCTCAACAAAC 59.039 50.000 0.00 0.00 0.00 2.93
639 665 8.849168 CCAGAAGTTGTATGCATATATTGGAAA 58.151 33.333 10.16 0.00 0.00 3.13
647 673 8.517056 TGTATGCATATATTGGAAATTGAGCTG 58.483 33.333 10.16 0.00 0.00 4.24
652 678 9.136952 GCATATATTGGAAATTGAGCTGAAATC 57.863 33.333 0.00 0.00 0.00 2.17
655 681 2.164219 TGGAAATTGAGCTGAAATCCGC 59.836 45.455 13.70 0.00 0.00 5.54
668 694 1.317613 AATCCGCTGTGCTTTGTCAA 58.682 45.000 0.00 0.00 0.00 3.18
672 698 1.587946 CCGCTGTGCTTTGTCAAAAAC 59.412 47.619 0.00 2.17 0.00 2.43
673 699 1.587946 CGCTGTGCTTTGTCAAAAACC 59.412 47.619 0.00 0.00 0.00 3.27
674 700 2.615869 GCTGTGCTTTGTCAAAAACCA 58.384 42.857 0.00 0.00 0.00 3.67
675 701 3.197265 GCTGTGCTTTGTCAAAAACCAT 58.803 40.909 0.00 0.00 0.00 3.55
676 702 3.001533 GCTGTGCTTTGTCAAAAACCATG 59.998 43.478 0.00 0.00 0.00 3.66
677 703 4.183101 CTGTGCTTTGTCAAAAACCATGT 58.817 39.130 0.00 0.00 0.00 3.21
678 704 4.573900 TGTGCTTTGTCAAAAACCATGTT 58.426 34.783 0.00 0.00 0.00 2.71
679 705 4.629200 TGTGCTTTGTCAAAAACCATGTTC 59.371 37.500 0.00 0.00 0.00 3.18
680 706 4.033932 GTGCTTTGTCAAAAACCATGTTCC 59.966 41.667 0.00 0.00 0.00 3.62
681 707 3.559655 GCTTTGTCAAAAACCATGTTCCC 59.440 43.478 0.00 0.00 0.00 3.97
682 708 3.444703 TTGTCAAAAACCATGTTCCCG 57.555 42.857 0.00 0.00 0.00 5.14
683 709 1.067821 TGTCAAAAACCATGTTCCCGC 59.932 47.619 0.00 0.00 0.00 6.13
684 710 0.312416 TCAAAAACCATGTTCCCGCG 59.688 50.000 0.00 0.00 0.00 6.46
685 711 0.312416 CAAAAACCATGTTCCCGCGA 59.688 50.000 8.23 0.00 0.00 5.87
686 712 0.596082 AAAAACCATGTTCCCGCGAG 59.404 50.000 8.23 0.00 0.00 5.03
698 724 4.110493 CGCGAGGAACCAGGATTC 57.890 61.111 0.00 0.00 0.00 2.52
699 725 1.517832 CGCGAGGAACCAGGATTCT 59.482 57.895 0.00 0.00 0.00 2.40
702 728 1.066143 GCGAGGAACCAGGATTCTTCA 60.066 52.381 0.00 0.00 35.08 3.02
705 731 3.447586 CGAGGAACCAGGATTCTTCACTA 59.552 47.826 0.00 0.00 35.08 2.74
706 732 4.081642 CGAGGAACCAGGATTCTTCACTAA 60.082 45.833 0.00 0.00 35.08 2.24
721 747 7.815840 TCTTCACTAACATGTCCAAATTTGA 57.184 32.000 19.86 0.00 0.00 2.69
725 751 8.408043 TCACTAACATGTCCAAATTTGAGATT 57.592 30.769 19.86 8.53 0.00 2.40
727 753 8.084073 CACTAACATGTCCAAATTTGAGATTGT 58.916 33.333 19.86 16.61 0.00 2.71
768 797 2.715046 ACGATCCACATTCATGCTGTT 58.285 42.857 0.00 0.00 0.00 3.16
770 799 2.286008 CGATCCACATTCATGCTGTTCG 60.286 50.000 0.00 3.24 0.00 3.95
822 852 2.749621 CTGGTCAAAGGGTGCAGATTAC 59.250 50.000 0.00 0.00 0.00 1.89
823 853 2.107378 TGGTCAAAGGGTGCAGATTACA 59.893 45.455 0.00 0.00 0.00 2.41
905 941 1.450134 CGGCATGCACCTTGAGCTA 60.450 57.895 21.36 0.00 0.00 3.32
909 945 1.676916 GCATGCACCTTGAGCTACTGA 60.677 52.381 14.21 0.00 0.00 3.41
969 1005 0.107508 AGCTCACCATGATCCAACCG 60.108 55.000 0.00 0.00 0.00 4.44
1012 1049 5.461032 AGCTAGCTCGCTATAAAATCTGT 57.539 39.130 12.68 0.00 38.76 3.41
1019 1056 5.531122 TCGCTATAAAATCTGTACTGCCT 57.469 39.130 0.00 0.00 0.00 4.75
1172 1214 4.148825 GCGCCTCCTCCACGACAT 62.149 66.667 0.00 0.00 0.00 3.06
1808 1865 2.048603 GGGCCATCCACTGACAAGC 61.049 63.158 4.39 0.00 35.00 4.01
1835 1900 3.771216 AGGAGAAACAGTGGCATCAATT 58.229 40.909 0.00 0.00 0.00 2.32
1845 1910 3.780294 AGTGGCATCAATTACCTGACCTA 59.220 43.478 0.00 0.00 0.00 3.08
1882 1947 8.214364 CCTAGAGTATAAGCCCAGAATCTTTTT 58.786 37.037 0.00 0.00 0.00 1.94
1885 1950 8.773216 AGAGTATAAGCCCAGAATCTTTTTACT 58.227 33.333 0.00 0.00 0.00 2.24
1928 1993 1.080772 CACTGCTGCACTGCCATTG 60.081 57.895 0.00 0.00 0.00 2.82
1929 1994 2.126071 CTGCTGCACTGCCATTGC 60.126 61.111 0.00 0.00 40.63 3.56
1930 1995 2.599281 TGCTGCACTGCCATTGCT 60.599 55.556 8.56 0.00 40.86 3.91
1931 1996 2.181021 GCTGCACTGCCATTGCTC 59.819 61.111 8.56 0.00 40.86 4.26
1946 2013 5.481105 CCATTGCTCTAAAAATTGCTCCAA 58.519 37.500 0.00 0.00 0.00 3.53
1965 2044 3.495753 CCAAACAGAAGCAGCAAAATTCC 59.504 43.478 0.00 0.00 0.00 3.01
1981 2060 9.504708 AGCAAAATTCCAAATGATGAACAATTA 57.495 25.926 0.00 0.00 0.00 1.40
1996 2075 4.209452 ACAATTATTTCTATGCGCCGTG 57.791 40.909 4.18 0.00 0.00 4.94
2012 2097 0.523125 CGTGTTATTGGCATGGCACG 60.523 55.000 23.26 16.84 42.39 5.34
2015 2100 0.100503 GTTATTGGCATGGCACGACC 59.899 55.000 23.26 6.93 39.84 4.79
2032 2117 1.417145 GACCGCCTCCTAGAGAGTCTA 59.583 57.143 0.00 0.00 41.47 2.59
2033 2118 1.141455 ACCGCCTCCTAGAGAGTCTAC 59.859 57.143 0.00 0.00 41.47 2.59
2035 2120 2.549349 CCGCCTCCTAGAGAGTCTACTC 60.549 59.091 1.72 1.72 41.47 2.59
2060 2173 2.354403 GCAGATCATTTTGCCTTTGCCT 60.354 45.455 0.00 0.00 36.33 4.75
2095 2208 3.955471 TCCATGGATCTCAAAAGTGTCC 58.045 45.455 11.44 0.00 0.00 4.02
2097 2210 3.441572 CCATGGATCTCAAAAGTGTCCAC 59.558 47.826 5.56 0.00 39.47 4.02
2101 2214 6.065976 TGGATCTCAAAAGTGTCCACATAT 57.934 37.500 0.00 0.00 35.17 1.78
2113 2226 4.339530 GTGTCCACATATCAGCTGTAGAGA 59.660 45.833 14.67 0.00 0.00 3.10
2117 2230 4.217334 CCACATATCAGCTGTAGAGATCGT 59.783 45.833 14.67 0.00 0.00 3.73
2120 2233 3.980646 ATCAGCTGTAGAGATCGTCAC 57.019 47.619 14.67 0.00 0.00 3.67
2125 2238 3.002862 AGCTGTAGAGATCGTCACGAATC 59.997 47.826 2.76 5.76 39.99 2.52
2126 2239 3.536833 CTGTAGAGATCGTCACGAATCG 58.463 50.000 2.76 0.00 39.99 3.34
2127 2240 3.192466 TGTAGAGATCGTCACGAATCGA 58.808 45.455 10.55 0.00 39.99 3.59
2128 2241 3.619929 TGTAGAGATCGTCACGAATCGAA 59.380 43.478 10.55 0.00 39.99 3.71
2129 2242 3.326733 AGAGATCGTCACGAATCGAAG 57.673 47.619 10.55 1.16 39.99 3.79
2131 2244 2.778928 GAGATCGTCACGAATCGAAGTG 59.221 50.000 10.55 11.33 39.99 3.16
2132 2245 2.161808 AGATCGTCACGAATCGAAGTGT 59.838 45.455 10.55 0.82 39.99 3.55
2133 2246 2.410785 TCGTCACGAATCGAAGTGTT 57.589 45.000 10.55 0.00 39.25 3.32
2134 2247 2.313234 TCGTCACGAATCGAAGTGTTC 58.687 47.619 10.55 3.27 39.25 3.18
2135 2248 2.031420 TCGTCACGAATCGAAGTGTTCT 60.031 45.455 10.55 0.00 39.25 3.01
2136 2249 2.338813 CGTCACGAATCGAAGTGTTCTC 59.661 50.000 10.55 7.21 39.25 2.87
2137 2250 2.662156 GTCACGAATCGAAGTGTTCTCC 59.338 50.000 10.55 1.75 39.25 3.71
2187 2300 6.306987 ACTCTTCACAATCAGTACCCAAAAT 58.693 36.000 0.00 0.00 0.00 1.82
2189 2302 7.040409 ACTCTTCACAATCAGTACCCAAAATTC 60.040 37.037 0.00 0.00 0.00 2.17
2207 2320 3.978718 TTCATGATGCACACGAAACAA 57.021 38.095 0.00 0.00 27.60 2.83
2208 2321 3.266541 TCATGATGCACACGAAACAAC 57.733 42.857 0.00 0.00 0.00 3.32
2212 2325 0.667993 ATGCACACGAAACAACCCAG 59.332 50.000 0.00 0.00 0.00 4.45
2222 2335 0.839946 AACAACCCAGACTGCTCAGT 59.160 50.000 1.62 1.62 45.84 3.41
2223 2336 1.717032 ACAACCCAGACTGCTCAGTA 58.283 50.000 2.07 0.00 42.66 2.74
2224 2337 2.047061 ACAACCCAGACTGCTCAGTAA 58.953 47.619 2.07 0.00 42.66 2.24
2225 2338 2.224305 ACAACCCAGACTGCTCAGTAAC 60.224 50.000 2.07 0.00 42.66 2.50
2226 2339 1.717032 ACCCAGACTGCTCAGTAACA 58.283 50.000 2.07 0.00 42.66 2.41
2227 2340 2.047061 ACCCAGACTGCTCAGTAACAA 58.953 47.619 2.07 0.00 42.66 2.83
2228 2341 2.438021 ACCCAGACTGCTCAGTAACAAA 59.562 45.455 2.07 0.00 42.66 2.83
2229 2342 3.073062 ACCCAGACTGCTCAGTAACAAAT 59.927 43.478 2.07 0.00 42.66 2.32
2230 2343 4.286032 ACCCAGACTGCTCAGTAACAAATA 59.714 41.667 2.07 0.00 42.66 1.40
2231 2344 5.045578 ACCCAGACTGCTCAGTAACAAATAT 60.046 40.000 2.07 0.00 42.66 1.28
2232 2345 6.156256 ACCCAGACTGCTCAGTAACAAATATA 59.844 38.462 2.07 0.00 42.66 0.86
2233 2346 7.047891 CCCAGACTGCTCAGTAACAAATATAA 58.952 38.462 2.07 0.00 42.66 0.98
2234 2347 7.225538 CCCAGACTGCTCAGTAACAAATATAAG 59.774 40.741 2.07 0.00 42.66 1.73
2235 2348 7.981789 CCAGACTGCTCAGTAACAAATATAAGA 59.018 37.037 2.07 0.00 42.66 2.10
2236 2349 9.539825 CAGACTGCTCAGTAACAAATATAAGAT 57.460 33.333 2.07 0.00 42.66 2.40
2237 2350 9.539825 AGACTGCTCAGTAACAAATATAAGATG 57.460 33.333 2.07 0.00 42.66 2.90
2238 2351 9.319143 GACTGCTCAGTAACAAATATAAGATGT 57.681 33.333 2.07 0.00 42.66 3.06
2239 2352 9.319143 ACTGCTCAGTAACAAATATAAGATGTC 57.681 33.333 0.00 0.00 40.43 3.06
2240 2353 8.662781 TGCTCAGTAACAAATATAAGATGTCC 57.337 34.615 0.00 0.00 0.00 4.02
2241 2354 7.715249 TGCTCAGTAACAAATATAAGATGTCCC 59.285 37.037 0.00 0.00 0.00 4.46
2242 2355 7.934120 GCTCAGTAACAAATATAAGATGTCCCT 59.066 37.037 0.00 0.00 0.00 4.20
2243 2356 9.482627 CTCAGTAACAAATATAAGATGTCCCTC 57.517 37.037 0.00 0.00 0.00 4.30
2244 2357 8.988060 TCAGTAACAAATATAAGATGTCCCTCA 58.012 33.333 0.00 0.00 0.00 3.86
2245 2358 9.613428 CAGTAACAAATATAAGATGTCCCTCAA 57.387 33.333 0.00 0.00 0.00 3.02
2249 2362 8.877864 ACAAATATAAGATGTCCCTCAAAACA 57.122 30.769 0.00 0.00 0.00 2.83
2250 2363 9.308000 ACAAATATAAGATGTCCCTCAAAACAA 57.692 29.630 0.00 0.00 0.00 2.83
2255 2368 5.930837 AGATGTCCCTCAAAACAAAAACA 57.069 34.783 0.00 0.00 0.00 2.83
2256 2369 6.293004 AGATGTCCCTCAAAACAAAAACAA 57.707 33.333 0.00 0.00 0.00 2.83
2257 2370 6.706295 AGATGTCCCTCAAAACAAAAACAAA 58.294 32.000 0.00 0.00 0.00 2.83
2258 2371 7.164803 AGATGTCCCTCAAAACAAAAACAAAA 58.835 30.769 0.00 0.00 0.00 2.44
2259 2372 7.663493 AGATGTCCCTCAAAACAAAAACAAAAA 59.337 29.630 0.00 0.00 0.00 1.94
2276 2389 2.143876 AAAAGCCACCACAACTGAGT 57.856 45.000 0.00 0.00 0.00 3.41
2277 2390 1.680338 AAAGCCACCACAACTGAGTC 58.320 50.000 0.00 0.00 0.00 3.36
2278 2391 0.546122 AAGCCACCACAACTGAGTCA 59.454 50.000 0.00 0.00 0.00 3.41
2279 2392 0.179045 AGCCACCACAACTGAGTCAC 60.179 55.000 0.00 0.00 0.00 3.67
2280 2393 0.463654 GCCACCACAACTGAGTCACA 60.464 55.000 0.00 0.00 0.00 3.58
2290 2403 2.159327 CTGAGTCACAGCACATCACA 57.841 50.000 0.00 0.00 39.86 3.58
2291 2404 2.067013 CTGAGTCACAGCACATCACAG 58.933 52.381 0.00 0.00 39.86 3.66
2292 2405 1.413812 TGAGTCACAGCACATCACAGT 59.586 47.619 0.00 0.00 0.00 3.55
2293 2406 2.627699 TGAGTCACAGCACATCACAGTA 59.372 45.455 0.00 0.00 0.00 2.74
2294 2407 3.069443 TGAGTCACAGCACATCACAGTAA 59.931 43.478 0.00 0.00 0.00 2.24
2295 2408 3.393800 AGTCACAGCACATCACAGTAAC 58.606 45.455 0.00 0.00 0.00 2.50
2296 2409 3.130633 GTCACAGCACATCACAGTAACA 58.869 45.455 0.00 0.00 0.00 2.41
2297 2410 3.559655 GTCACAGCACATCACAGTAACAA 59.440 43.478 0.00 0.00 0.00 2.83
2298 2411 4.035091 GTCACAGCACATCACAGTAACAAA 59.965 41.667 0.00 0.00 0.00 2.83
2299 2412 4.637977 TCACAGCACATCACAGTAACAAAA 59.362 37.500 0.00 0.00 0.00 2.44
2300 2413 4.734854 CACAGCACATCACAGTAACAAAAC 59.265 41.667 0.00 0.00 0.00 2.43
2301 2414 4.397730 ACAGCACATCACAGTAACAAAACA 59.602 37.500 0.00 0.00 0.00 2.83
2302 2415 5.105957 ACAGCACATCACAGTAACAAAACAA 60.106 36.000 0.00 0.00 0.00 2.83
2303 2416 5.978919 CAGCACATCACAGTAACAAAACAAT 59.021 36.000 0.00 0.00 0.00 2.71
2304 2417 6.476380 CAGCACATCACAGTAACAAAACAATT 59.524 34.615 0.00 0.00 0.00 2.32
2305 2418 6.476380 AGCACATCACAGTAACAAAACAATTG 59.524 34.615 3.24 3.24 0.00 2.32
2306 2419 6.255453 GCACATCACAGTAACAAAACAATTGT 59.745 34.615 4.92 4.92 0.00 2.71
2307 2420 7.515059 GCACATCACAGTAACAAAACAATTGTC 60.515 37.037 12.39 0.00 0.00 3.18
2308 2421 7.487509 CACATCACAGTAACAAAACAATTGTCA 59.512 33.333 12.39 0.00 0.00 3.58
2309 2422 8.031864 ACATCACAGTAACAAAACAATTGTCAA 58.968 29.630 12.39 0.00 0.00 3.18
2310 2423 9.033481 CATCACAGTAACAAAACAATTGTCAAT 57.967 29.630 12.39 0.00 0.00 2.57
2312 2425 9.509855 TCACAGTAACAAAACAATTGTCAATAC 57.490 29.630 12.39 10.77 0.00 1.89
2313 2426 9.295214 CACAGTAACAAAACAATTGTCAATACA 57.705 29.630 12.39 0.00 0.00 2.29
2314 2427 9.296400 ACAGTAACAAAACAATTGTCAATACAC 57.704 29.630 12.39 6.84 34.61 2.90
2315 2428 8.751335 CAGTAACAAAACAATTGTCAATACACC 58.249 33.333 12.39 0.00 34.61 4.16
2316 2429 8.470805 AGTAACAAAACAATTGTCAATACACCA 58.529 29.630 12.39 0.00 34.61 4.17
2317 2430 9.088512 GTAACAAAACAATTGTCAATACACCAA 57.911 29.630 12.39 0.00 34.61 3.67
2318 2431 7.532682 ACAAAACAATTGTCAATACACCAAC 57.467 32.000 12.39 0.00 34.61 3.77
2319 2432 7.099764 ACAAAACAATTGTCAATACACCAACA 58.900 30.769 12.39 0.00 34.61 3.33
2320 2433 7.277539 ACAAAACAATTGTCAATACACCAACAG 59.722 33.333 12.39 0.00 34.61 3.16
2321 2434 4.870363 ACAATTGTCAATACACCAACAGC 58.130 39.130 4.92 0.00 34.61 4.40
2322 2435 4.340666 ACAATTGTCAATACACCAACAGCA 59.659 37.500 4.92 0.00 34.61 4.41
2323 2436 3.980646 TTGTCAATACACCAACAGCAC 57.019 42.857 0.00 0.00 34.61 4.40
2324 2437 2.226330 TGTCAATACACCAACAGCACC 58.774 47.619 0.00 0.00 0.00 5.01
2325 2438 2.226330 GTCAATACACCAACAGCACCA 58.774 47.619 0.00 0.00 0.00 4.17
2326 2439 2.031157 GTCAATACACCAACAGCACCAC 60.031 50.000 0.00 0.00 0.00 4.16
2327 2440 1.952990 CAATACACCAACAGCACCACA 59.047 47.619 0.00 0.00 0.00 4.17
2328 2441 2.557924 CAATACACCAACAGCACCACAT 59.442 45.455 0.00 0.00 0.00 3.21
2329 2442 2.356665 TACACCAACAGCACCACATT 57.643 45.000 0.00 0.00 0.00 2.71
2330 2443 1.032014 ACACCAACAGCACCACATTC 58.968 50.000 0.00 0.00 0.00 2.67
2331 2444 0.314935 CACCAACAGCACCACATTCC 59.685 55.000 0.00 0.00 0.00 3.01
2332 2445 0.106268 ACCAACAGCACCACATTCCA 60.106 50.000 0.00 0.00 0.00 3.53
2333 2446 0.599558 CCAACAGCACCACATTCCAG 59.400 55.000 0.00 0.00 0.00 3.86
2334 2447 1.321474 CAACAGCACCACATTCCAGT 58.679 50.000 0.00 0.00 0.00 4.00
2335 2448 2.503331 CAACAGCACCACATTCCAGTA 58.497 47.619 0.00 0.00 0.00 2.74
2336 2449 3.084039 CAACAGCACCACATTCCAGTAT 58.916 45.455 0.00 0.00 0.00 2.12
2337 2450 4.260985 CAACAGCACCACATTCCAGTATA 58.739 43.478 0.00 0.00 0.00 1.47
2338 2451 4.778213 ACAGCACCACATTCCAGTATAT 57.222 40.909 0.00 0.00 0.00 0.86
2339 2452 4.454678 ACAGCACCACATTCCAGTATATG 58.545 43.478 0.00 0.00 0.00 1.78
2340 2453 4.164030 ACAGCACCACATTCCAGTATATGA 59.836 41.667 0.00 0.00 0.00 2.15
2341 2454 4.753610 CAGCACCACATTCCAGTATATGAG 59.246 45.833 0.00 0.00 0.00 2.90
2342 2455 3.499918 GCACCACATTCCAGTATATGAGC 59.500 47.826 0.00 0.00 0.00 4.26
2343 2456 3.742882 CACCACATTCCAGTATATGAGCG 59.257 47.826 0.00 0.00 0.00 5.03
2344 2457 2.738846 CCACATTCCAGTATATGAGCGC 59.261 50.000 0.00 0.00 0.00 5.92
2345 2458 3.555795 CCACATTCCAGTATATGAGCGCT 60.556 47.826 11.27 11.27 0.00 5.92
2346 2459 4.060900 CACATTCCAGTATATGAGCGCTT 58.939 43.478 13.26 0.00 0.00 4.68
2347 2460 4.060900 ACATTCCAGTATATGAGCGCTTG 58.939 43.478 13.26 3.19 0.00 4.01
2348 2461 3.819564 TTCCAGTATATGAGCGCTTGT 57.180 42.857 13.26 5.98 0.00 3.16
2349 2462 3.097877 TCCAGTATATGAGCGCTTGTG 57.902 47.619 13.26 1.45 0.00 3.33
2350 2463 2.430694 TCCAGTATATGAGCGCTTGTGT 59.569 45.455 13.26 4.27 0.00 3.72
2351 2464 2.797156 CCAGTATATGAGCGCTTGTGTC 59.203 50.000 13.26 0.00 0.00 3.67
2352 2465 3.491619 CCAGTATATGAGCGCTTGTGTCT 60.492 47.826 13.26 3.67 0.00 3.41
2353 2466 3.488678 CAGTATATGAGCGCTTGTGTCTG 59.511 47.826 13.26 12.60 0.00 3.51
2354 2467 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
2355 2468 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
2356 2469 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
2357 2470 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
2358 2471 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
2359 2472 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
2360 2473 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
2361 2474 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
2362 2475 2.677199 CGCTTGTGTCTGTACTGATGT 58.323 47.619 5.69 0.00 0.00 3.06
2363 2476 3.059884 CGCTTGTGTCTGTACTGATGTT 58.940 45.455 5.69 0.00 0.00 2.71
2364 2477 4.234574 CGCTTGTGTCTGTACTGATGTTA 58.765 43.478 5.69 0.00 0.00 2.41
2365 2478 4.684242 CGCTTGTGTCTGTACTGATGTTAA 59.316 41.667 5.69 0.07 0.00 2.01
2366 2479 5.176774 CGCTTGTGTCTGTACTGATGTTAAA 59.823 40.000 5.69 0.00 0.00 1.52
2367 2480 6.292649 CGCTTGTGTCTGTACTGATGTTAAAA 60.293 38.462 5.69 0.00 0.00 1.52
2368 2481 7.414436 GCTTGTGTCTGTACTGATGTTAAAAA 58.586 34.615 5.69 0.00 0.00 1.94
2389 2502 0.942252 AAAACCCGTTCTCAGTTCGC 59.058 50.000 0.00 0.00 0.00 4.70
2390 2503 0.179067 AAACCCGTTCTCAGTTCGCA 60.179 50.000 0.00 0.00 0.00 5.10
2391 2504 0.878961 AACCCGTTCTCAGTTCGCAC 60.879 55.000 0.00 0.00 0.00 5.34
2392 2505 1.300620 CCCGTTCTCAGTTCGCACA 60.301 57.895 0.00 0.00 0.00 4.57
2393 2506 0.878523 CCCGTTCTCAGTTCGCACAA 60.879 55.000 0.00 0.00 0.00 3.33
2394 2507 1.148310 CCGTTCTCAGTTCGCACAAT 58.852 50.000 0.00 0.00 0.00 2.71
2395 2508 1.531149 CCGTTCTCAGTTCGCACAATT 59.469 47.619 0.00 0.00 0.00 2.32
2396 2509 2.411547 CCGTTCTCAGTTCGCACAATTC 60.412 50.000 0.00 0.00 0.00 2.17
2397 2510 2.220824 CGTTCTCAGTTCGCACAATTCA 59.779 45.455 0.00 0.00 0.00 2.57
2398 2511 3.303066 CGTTCTCAGTTCGCACAATTCAA 60.303 43.478 0.00 0.00 0.00 2.69
2399 2512 4.611355 CGTTCTCAGTTCGCACAATTCAAT 60.611 41.667 0.00 0.00 0.00 2.57
2400 2513 5.389411 CGTTCTCAGTTCGCACAATTCAATA 60.389 40.000 0.00 0.00 0.00 1.90
2401 2514 6.546395 GTTCTCAGTTCGCACAATTCAATAT 58.454 36.000 0.00 0.00 0.00 1.28
2402 2515 6.741992 TCTCAGTTCGCACAATTCAATATT 57.258 33.333 0.00 0.00 0.00 1.28
2403 2516 6.775088 TCTCAGTTCGCACAATTCAATATTC 58.225 36.000 0.00 0.00 0.00 1.75
2404 2517 5.879237 TCAGTTCGCACAATTCAATATTCC 58.121 37.500 0.00 0.00 0.00 3.01
2405 2518 5.414144 TCAGTTCGCACAATTCAATATTCCA 59.586 36.000 0.00 0.00 0.00 3.53
2406 2519 5.740569 CAGTTCGCACAATTCAATATTCCAG 59.259 40.000 0.00 0.00 0.00 3.86
2407 2520 5.415701 AGTTCGCACAATTCAATATTCCAGT 59.584 36.000 0.00 0.00 0.00 4.00
2408 2521 6.597672 AGTTCGCACAATTCAATATTCCAGTA 59.402 34.615 0.00 0.00 0.00 2.74
2409 2522 6.603237 TCGCACAATTCAATATTCCAGTAG 57.397 37.500 0.00 0.00 0.00 2.57
2410 2523 5.007626 TCGCACAATTCAATATTCCAGTAGC 59.992 40.000 0.00 0.00 0.00 3.58
2411 2524 5.008019 CGCACAATTCAATATTCCAGTAGCT 59.992 40.000 0.00 0.00 0.00 3.32
2412 2525 6.202762 CGCACAATTCAATATTCCAGTAGCTA 59.797 38.462 0.00 0.00 0.00 3.32
2413 2526 7.355778 GCACAATTCAATATTCCAGTAGCTAC 58.644 38.462 16.43 16.43 0.00 3.58
2414 2527 7.567571 CACAATTCAATATTCCAGTAGCTACG 58.432 38.462 17.99 12.54 0.00 3.51
2415 2528 7.438160 CACAATTCAATATTCCAGTAGCTACGA 59.562 37.037 17.99 7.75 0.00 3.43
2416 2529 8.150945 ACAATTCAATATTCCAGTAGCTACGAT 58.849 33.333 17.99 12.71 0.00 3.73
2417 2530 8.993121 CAATTCAATATTCCAGTAGCTACGATT 58.007 33.333 17.99 9.23 0.00 3.34
2418 2531 8.764524 ATTCAATATTCCAGTAGCTACGATTC 57.235 34.615 17.99 0.00 0.00 2.52
2419 2532 6.379386 TCAATATTCCAGTAGCTACGATTCG 58.621 40.000 17.99 4.14 0.00 3.34
2420 2533 6.206048 TCAATATTCCAGTAGCTACGATTCGA 59.794 38.462 17.99 7.61 0.00 3.71
2421 2534 3.965292 TTCCAGTAGCTACGATTCGAG 57.035 47.619 17.99 7.07 0.00 4.04
2422 2535 3.189618 TCCAGTAGCTACGATTCGAGA 57.810 47.619 17.99 5.94 0.00 4.04
2423 2536 3.741249 TCCAGTAGCTACGATTCGAGAT 58.259 45.455 17.99 7.23 0.00 2.75
2424 2537 3.747010 TCCAGTAGCTACGATTCGAGATC 59.253 47.826 17.99 0.00 0.00 2.75
2425 2538 3.120130 CCAGTAGCTACGATTCGAGATCC 60.120 52.174 17.99 0.00 0.00 3.36
2426 2539 3.498777 CAGTAGCTACGATTCGAGATCCA 59.501 47.826 17.99 0.00 0.00 3.41
2427 2540 3.749088 AGTAGCTACGATTCGAGATCCAG 59.251 47.826 17.99 1.40 0.00 3.86
2428 2541 1.883275 AGCTACGATTCGAGATCCAGG 59.117 52.381 13.95 0.00 0.00 4.45
2429 2542 1.609555 GCTACGATTCGAGATCCAGGT 59.390 52.381 13.95 0.00 0.00 4.00
2430 2543 2.350964 GCTACGATTCGAGATCCAGGTC 60.351 54.545 13.95 0.00 0.00 3.85
2431 2544 2.060050 ACGATTCGAGATCCAGGTCT 57.940 50.000 13.95 0.00 0.00 3.85
2432 2545 1.950909 ACGATTCGAGATCCAGGTCTC 59.049 52.381 13.95 0.00 40.96 3.36
2433 2546 1.268352 CGATTCGAGATCCAGGTCTCC 59.732 57.143 0.00 0.00 41.24 3.71
2434 2547 1.616374 GATTCGAGATCCAGGTCTCCC 59.384 57.143 2.36 0.00 41.24 4.30
2435 2548 0.397254 TTCGAGATCCAGGTCTCCCC 60.397 60.000 2.36 0.00 41.24 4.81
2436 2549 2.196925 CGAGATCCAGGTCTCCCCG 61.197 68.421 2.36 3.12 41.24 5.73
2437 2550 1.230497 GAGATCCAGGTCTCCCCGA 59.770 63.158 0.00 0.00 38.94 5.14
2438 2551 0.825840 GAGATCCAGGTCTCCCCGAG 60.826 65.000 0.00 0.00 38.94 4.63
2439 2552 1.230497 GATCCAGGTCTCCCCGAGA 59.770 63.158 0.00 0.00 38.74 4.04
2440 2553 0.178947 GATCCAGGTCTCCCCGAGAT 60.179 60.000 0.00 0.00 40.98 2.75
2441 2554 1.075698 GATCCAGGTCTCCCCGAGATA 59.924 57.143 0.00 0.00 40.98 1.98
2442 2555 1.158904 TCCAGGTCTCCCCGAGATAT 58.841 55.000 0.00 0.00 40.98 1.63
2443 2556 1.503784 TCCAGGTCTCCCCGAGATATT 59.496 52.381 0.00 0.00 40.98 1.28
2444 2557 1.896465 CCAGGTCTCCCCGAGATATTC 59.104 57.143 0.00 0.00 40.98 1.75
2445 2558 2.491825 CCAGGTCTCCCCGAGATATTCT 60.492 54.545 0.00 0.00 40.98 2.40
2446 2559 3.245300 CCAGGTCTCCCCGAGATATTCTA 60.245 52.174 0.00 0.00 40.98 2.10
2447 2560 3.759618 CAGGTCTCCCCGAGATATTCTAC 59.240 52.174 0.00 0.00 40.98 2.59
2448 2561 3.658705 AGGTCTCCCCGAGATATTCTACT 59.341 47.826 0.00 0.00 40.98 2.57
2449 2562 4.011698 GGTCTCCCCGAGATATTCTACTC 58.988 52.174 0.00 0.00 40.98 2.59
2450 2563 4.011698 GTCTCCCCGAGATATTCTACTCC 58.988 52.174 0.00 0.00 40.98 3.85
2451 2564 3.011119 CTCCCCGAGATATTCTACTCCG 58.989 54.545 0.00 0.00 0.00 4.63
2452 2565 1.473278 CCCCGAGATATTCTACTCCGC 59.527 57.143 0.00 0.00 0.00 5.54
2453 2566 2.438411 CCCGAGATATTCTACTCCGCT 58.562 52.381 0.00 0.00 0.00 5.52
2454 2567 2.420722 CCCGAGATATTCTACTCCGCTC 59.579 54.545 0.00 0.00 0.00 5.03
2455 2568 3.340034 CCGAGATATTCTACTCCGCTCT 58.660 50.000 0.00 0.00 0.00 4.09
2456 2569 3.754323 CCGAGATATTCTACTCCGCTCTT 59.246 47.826 0.00 0.00 0.00 2.85
2457 2570 4.936411 CCGAGATATTCTACTCCGCTCTTA 59.064 45.833 0.00 0.00 0.00 2.10
2458 2571 5.163834 CCGAGATATTCTACTCCGCTCTTAC 60.164 48.000 0.00 0.00 0.00 2.34
2466 2579 5.227908 TCTACTCCGCTCTTACAAGTTTTG 58.772 41.667 0.00 0.00 0.00 2.44
2480 2593 4.747605 ACAAGTTTTGGTGTGTTTGTTCAC 59.252 37.500 0.00 0.00 35.54 3.18
2481 2594 4.864704 AGTTTTGGTGTGTTTGTTCACT 57.135 36.364 0.00 0.00 38.90 3.41
2482 2595 4.805219 AGTTTTGGTGTGTTTGTTCACTC 58.195 39.130 0.00 0.00 38.90 3.51
2484 2597 5.047377 AGTTTTGGTGTGTTTGTTCACTCAT 60.047 36.000 0.00 0.00 38.90 2.90
2490 2644 5.009010 GGTGTGTTTGTTCACTCATCTCATT 59.991 40.000 0.00 0.00 38.90 2.57
2497 2651 6.106648 TGTTCACTCATCTCATTTCAGTCT 57.893 37.500 0.00 0.00 0.00 3.24
2499 2653 5.735285 TCACTCATCTCATTTCAGTCTGT 57.265 39.130 0.00 0.00 0.00 3.41
2503 2657 6.018913 CACTCATCTCATTTCAGTCTGTATGC 60.019 42.308 0.00 0.00 0.00 3.14
2560 2714 4.715527 ATGAACGAAGGGAGTACTACAC 57.284 45.455 7.57 0.00 0.00 2.90
2561 2715 3.489355 TGAACGAAGGGAGTACTACACA 58.511 45.455 7.57 0.00 0.00 3.72
2562 2716 3.890756 TGAACGAAGGGAGTACTACACAA 59.109 43.478 7.57 0.00 0.00 3.33
2563 2717 4.341806 TGAACGAAGGGAGTACTACACAAA 59.658 41.667 7.57 0.00 0.00 2.83
2564 2718 4.942761 ACGAAGGGAGTACTACACAAAA 57.057 40.909 7.57 0.00 0.00 2.44
2565 2719 5.280654 ACGAAGGGAGTACTACACAAAAA 57.719 39.130 7.57 0.00 0.00 1.94
2566 2720 5.861727 ACGAAGGGAGTACTACACAAAAAT 58.138 37.500 7.57 0.00 0.00 1.82
2567 2721 5.699458 ACGAAGGGAGTACTACACAAAAATG 59.301 40.000 7.57 0.00 0.00 2.32
2568 2722 5.699458 CGAAGGGAGTACTACACAAAAATGT 59.301 40.000 7.57 0.00 36.56 2.71
2569 2723 6.869913 CGAAGGGAGTACTACACAAAAATGTA 59.130 38.462 7.57 0.00 33.85 2.29
2570 2724 7.548075 CGAAGGGAGTACTACACAAAAATGTAT 59.452 37.037 7.57 0.00 34.59 2.29
2571 2725 9.880157 GAAGGGAGTACTACACAAAAATGTATA 57.120 33.333 7.57 0.00 34.59 1.47
2574 2728 9.269453 GGGAGTACTACACAAAAATGTATATCC 57.731 37.037 7.57 0.00 34.59 2.59
2583 2737 9.747898 ACACAAAAATGTATATCCTAAACCTCA 57.252 29.630 0.00 0.00 0.00 3.86
2585 2739 9.975218 ACAAAAATGTATATCCTAAACCTCACT 57.025 29.630 0.00 0.00 0.00 3.41
2592 2746 9.310449 TGTATATCCTAAACCTCACTAATCTCC 57.690 37.037 0.00 0.00 0.00 3.71
2593 2747 7.800300 ATATCCTAAACCTCACTAATCTCCC 57.200 40.000 0.00 0.00 0.00 4.30
2594 2748 4.296056 TCCTAAACCTCACTAATCTCCCC 58.704 47.826 0.00 0.00 0.00 4.81
2595 2749 4.015541 TCCTAAACCTCACTAATCTCCCCT 60.016 45.833 0.00 0.00 0.00 4.79
2596 2750 4.345547 CCTAAACCTCACTAATCTCCCCTC 59.654 50.000 0.00 0.00 0.00 4.30
2597 2751 3.786213 AACCTCACTAATCTCCCCTCT 57.214 47.619 0.00 0.00 0.00 3.69
2598 2752 3.786213 ACCTCACTAATCTCCCCTCTT 57.214 47.619 0.00 0.00 0.00 2.85
2599 2753 4.081695 ACCTCACTAATCTCCCCTCTTT 57.918 45.455 0.00 0.00 0.00 2.52
2600 2754 5.222278 ACCTCACTAATCTCCCCTCTTTA 57.778 43.478 0.00 0.00 0.00 1.85
2601 2755 4.963628 ACCTCACTAATCTCCCCTCTTTAC 59.036 45.833 0.00 0.00 0.00 2.01
2602 2756 5.212745 CCTCACTAATCTCCCCTCTTTACT 58.787 45.833 0.00 0.00 0.00 2.24
2603 2757 5.663556 CCTCACTAATCTCCCCTCTTTACTT 59.336 44.000 0.00 0.00 0.00 2.24
2604 2758 6.157123 CCTCACTAATCTCCCCTCTTTACTTT 59.843 42.308 0.00 0.00 0.00 2.66
2605 2759 7.184067 TCACTAATCTCCCCTCTTTACTTTC 57.816 40.000 0.00 0.00 0.00 2.62
2606 2760 6.729100 TCACTAATCTCCCCTCTTTACTTTCA 59.271 38.462 0.00 0.00 0.00 2.69
2607 2761 7.236847 TCACTAATCTCCCCTCTTTACTTTCAA 59.763 37.037 0.00 0.00 0.00 2.69
2608 2762 8.049721 CACTAATCTCCCCTCTTTACTTTCAAT 58.950 37.037 0.00 0.00 0.00 2.57
2609 2763 8.049721 ACTAATCTCCCCTCTTTACTTTCAATG 58.950 37.037 0.00 0.00 0.00 2.82
2610 2764 5.843019 TCTCCCCTCTTTACTTTCAATGT 57.157 39.130 0.00 0.00 0.00 2.71
2611 2765 6.945636 TCTCCCCTCTTTACTTTCAATGTA 57.054 37.500 0.00 0.00 0.00 2.29
2612 2766 7.510675 TCTCCCCTCTTTACTTTCAATGTAT 57.489 36.000 0.00 0.00 0.00 2.29
2613 2767 8.618240 TCTCCCCTCTTTACTTTCAATGTATA 57.382 34.615 0.00 0.00 0.00 1.47
2614 2768 9.225682 TCTCCCCTCTTTACTTTCAATGTATAT 57.774 33.333 0.00 0.00 0.00 0.86
2660 2814 4.327854 CGTAGGTGCATCAAAACTCTTC 57.672 45.455 0.00 0.00 0.00 2.87
2661 2815 3.125316 CGTAGGTGCATCAAAACTCTTCC 59.875 47.826 0.00 0.00 0.00 3.46
2662 2816 2.154462 AGGTGCATCAAAACTCTTCCG 58.846 47.619 0.00 0.00 0.00 4.30
2663 2817 1.401539 GGTGCATCAAAACTCTTCCGC 60.402 52.381 0.00 0.00 0.00 5.54
2664 2818 1.537202 GTGCATCAAAACTCTTCCGCT 59.463 47.619 0.00 0.00 0.00 5.52
2665 2819 1.806542 TGCATCAAAACTCTTCCGCTC 59.193 47.619 0.00 0.00 0.00 5.03
2666 2820 1.806542 GCATCAAAACTCTTCCGCTCA 59.193 47.619 0.00 0.00 0.00 4.26
2667 2821 2.421424 GCATCAAAACTCTTCCGCTCAT 59.579 45.455 0.00 0.00 0.00 2.90
2668 2822 3.486542 GCATCAAAACTCTTCCGCTCATC 60.487 47.826 0.00 0.00 0.00 2.92
2669 2823 2.337583 TCAAAACTCTTCCGCTCATCG 58.662 47.619 0.00 0.00 38.08 3.84
2678 2832 4.643733 CGCTCATCGGACCATCTC 57.356 61.111 0.00 0.00 33.78 2.75
2679 2833 1.006805 CGCTCATCGGACCATCTCC 60.007 63.158 0.00 0.00 35.33 3.71
2680 2834 1.459455 CGCTCATCGGACCATCTCCT 61.459 60.000 0.00 0.00 36.80 3.69
2681 2835 0.755686 GCTCATCGGACCATCTCCTT 59.244 55.000 0.00 0.00 36.80 3.36
2682 2836 1.139853 GCTCATCGGACCATCTCCTTT 59.860 52.381 0.00 0.00 36.80 3.11
2683 2837 2.420687 GCTCATCGGACCATCTCCTTTT 60.421 50.000 0.00 0.00 36.80 2.27
2684 2838 3.462021 CTCATCGGACCATCTCCTTTTC 58.538 50.000 0.00 0.00 36.80 2.29
2685 2839 3.107601 TCATCGGACCATCTCCTTTTCT 58.892 45.455 0.00 0.00 36.80 2.52
2686 2840 4.286707 TCATCGGACCATCTCCTTTTCTA 58.713 43.478 0.00 0.00 36.80 2.10
2687 2841 4.342378 TCATCGGACCATCTCCTTTTCTAG 59.658 45.833 0.00 0.00 36.80 2.43
2688 2842 3.709587 TCGGACCATCTCCTTTTCTAGT 58.290 45.455 0.00 0.00 36.80 2.57
2689 2843 4.094476 TCGGACCATCTCCTTTTCTAGTT 58.906 43.478 0.00 0.00 36.80 2.24
2690 2844 4.159879 TCGGACCATCTCCTTTTCTAGTTC 59.840 45.833 0.00 0.00 36.80 3.01
2691 2845 4.081642 CGGACCATCTCCTTTTCTAGTTCA 60.082 45.833 0.00 0.00 36.80 3.18
2692 2846 5.423886 GGACCATCTCCTTTTCTAGTTCAG 58.576 45.833 0.00 0.00 35.89 3.02
2693 2847 4.837972 ACCATCTCCTTTTCTAGTTCAGC 58.162 43.478 0.00 0.00 0.00 4.26
2694 2848 4.287067 ACCATCTCCTTTTCTAGTTCAGCA 59.713 41.667 0.00 0.00 0.00 4.41
2695 2849 4.633565 CCATCTCCTTTTCTAGTTCAGCAC 59.366 45.833 0.00 0.00 0.00 4.40
2696 2850 4.955811 TCTCCTTTTCTAGTTCAGCACA 57.044 40.909 0.00 0.00 0.00 4.57
2697 2851 5.290493 TCTCCTTTTCTAGTTCAGCACAA 57.710 39.130 0.00 0.00 0.00 3.33
2698 2852 5.300752 TCTCCTTTTCTAGTTCAGCACAAG 58.699 41.667 0.00 0.00 0.00 3.16
2699 2853 3.815401 TCCTTTTCTAGTTCAGCACAAGC 59.185 43.478 0.00 0.00 42.56 4.01
2700 2854 3.057946 CCTTTTCTAGTTCAGCACAAGCC 60.058 47.826 0.00 0.00 43.56 4.35
2701 2855 2.928801 TTCTAGTTCAGCACAAGCCA 57.071 45.000 0.00 0.00 43.56 4.75
2702 2856 2.928801 TCTAGTTCAGCACAAGCCAA 57.071 45.000 0.00 0.00 43.56 4.52
2703 2857 3.207265 TCTAGTTCAGCACAAGCCAAA 57.793 42.857 0.00 0.00 43.56 3.28
2704 2858 3.754965 TCTAGTTCAGCACAAGCCAAAT 58.245 40.909 0.00 0.00 43.56 2.32
2705 2859 2.806608 AGTTCAGCACAAGCCAAATG 57.193 45.000 0.00 0.00 43.56 2.32
2706 2860 2.034124 AGTTCAGCACAAGCCAAATGT 58.966 42.857 0.00 0.00 43.56 2.71
2720 2874 3.077229 CAAATGTGTTTTGGTGCTCGA 57.923 42.857 0.00 0.00 40.90 4.04
2721 2875 3.044986 CAAATGTGTTTTGGTGCTCGAG 58.955 45.455 8.45 8.45 40.90 4.04
2722 2876 0.593128 ATGTGTTTTGGTGCTCGAGC 59.407 50.000 30.42 30.42 42.50 5.03
2723 2877 0.463654 TGTGTTTTGGTGCTCGAGCT 60.464 50.000 35.27 0.00 42.66 4.09
2724 2878 0.235926 GTGTTTTGGTGCTCGAGCTC 59.764 55.000 35.27 31.07 42.66 4.09
2730 2884 2.895680 GTGCTCGAGCTCCATGGA 59.104 61.111 35.27 15.27 42.66 3.41
2731 2885 1.227205 GTGCTCGAGCTCCATGGAG 60.227 63.158 33.73 33.73 44.56 3.86
2744 2898 5.557891 CTCCATGGAGCACTTTAAAAGAG 57.442 43.478 28.45 0.93 35.31 2.85
2745 2899 5.241403 TCCATGGAGCACTTTAAAAGAGA 57.759 39.130 11.44 0.00 0.00 3.10
2746 2900 5.630121 TCCATGGAGCACTTTAAAAGAGAA 58.370 37.500 11.44 0.00 0.00 2.87
2747 2901 6.068010 TCCATGGAGCACTTTAAAAGAGAAA 58.932 36.000 11.44 0.00 0.00 2.52
2748 2902 6.549364 TCCATGGAGCACTTTAAAAGAGAAAA 59.451 34.615 11.44 0.00 0.00 2.29
2749 2903 6.642540 CCATGGAGCACTTTAAAAGAGAAAAC 59.357 38.462 5.56 0.00 0.00 2.43
2750 2904 6.767524 TGGAGCACTTTAAAAGAGAAAACA 57.232 33.333 0.00 0.00 0.00 2.83
2751 2905 7.164230 TGGAGCACTTTAAAAGAGAAAACAA 57.836 32.000 0.00 0.00 0.00 2.83
2752 2906 7.607250 TGGAGCACTTTAAAAGAGAAAACAAA 58.393 30.769 0.00 0.00 0.00 2.83
2753 2907 8.091449 TGGAGCACTTTAAAAGAGAAAACAAAA 58.909 29.630 0.00 0.00 0.00 2.44
2754 2908 8.595533 GGAGCACTTTAAAAGAGAAAACAAAAG 58.404 33.333 0.00 0.00 0.00 2.27
2755 2909 9.353999 GAGCACTTTAAAAGAGAAAACAAAAGA 57.646 29.630 0.00 0.00 0.00 2.52
2756 2910 9.705290 AGCACTTTAAAAGAGAAAACAAAAGAA 57.295 25.926 0.00 0.00 0.00 2.52
2771 2925 7.903995 AACAAAAGAAATGTTTCAAAGCTCA 57.096 28.000 8.09 0.00 37.74 4.26
2772 2926 7.903995 ACAAAAGAAATGTTTCAAAGCTCAA 57.096 28.000 8.09 0.00 39.61 3.02
2773 2927 8.321650 ACAAAAGAAATGTTTCAAAGCTCAAA 57.678 26.923 8.09 0.00 39.61 2.69
2774 2928 8.782144 ACAAAAGAAATGTTTCAAAGCTCAAAA 58.218 25.926 8.09 0.00 39.61 2.44
2775 2929 9.054191 CAAAAGAAATGTTTCAAAGCTCAAAAC 57.946 29.630 8.09 10.16 39.61 2.43
2776 2930 7.903995 AAGAAATGTTTCAAAGCTCAAAACA 57.096 28.000 18.04 18.04 44.36 2.83
2783 2937 8.633075 TGTTTCAAAGCTCAAAACATTCTAAG 57.367 30.769 13.98 0.00 37.82 2.18
2784 2938 8.465999 TGTTTCAAAGCTCAAAACATTCTAAGA 58.534 29.630 13.98 0.00 37.82 2.10
2785 2939 9.301153 GTTTCAAAGCTCAAAACATTCTAAGAA 57.699 29.630 11.55 0.00 33.97 2.52
2789 2943 9.897744 CAAAGCTCAAAACATTCTAAGAATACA 57.102 29.630 0.00 0.00 0.00 2.29
2797 2951 9.825972 AAAACATTCTAAGAATACATTGACACG 57.174 29.630 0.00 0.00 0.00 4.49
2798 2952 8.547967 AACATTCTAAGAATACATTGACACGT 57.452 30.769 0.00 0.00 0.00 4.49
2799 2953 7.963981 ACATTCTAAGAATACATTGACACGTG 58.036 34.615 15.48 15.48 0.00 4.49
2800 2954 7.817478 ACATTCTAAGAATACATTGACACGTGA 59.183 33.333 25.01 0.00 0.00 4.35
2801 2955 7.812309 TTCTAAGAATACATTGACACGTGAG 57.188 36.000 25.01 8.71 0.00 3.51
2802 2956 4.928661 AAGAATACATTGACACGTGAGC 57.071 40.909 25.01 14.17 0.00 4.26
2803 2957 4.193826 AGAATACATTGACACGTGAGCT 57.806 40.909 25.01 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.718753 TCCAACAATTGCCTGAAATAAAACATT 59.281 29.630 5.05 0.00 0.00 2.71
109 110 3.557228 ATGTCAGAGAAATGAGAGGCC 57.443 47.619 0.00 0.00 0.00 5.19
192 200 6.395629 CAGGTGATCAGAAAATGCTTTCATT 58.604 36.000 0.00 0.00 42.99 2.57
199 207 3.507233 TGTTCCAGGTGATCAGAAAATGC 59.493 43.478 0.00 0.00 0.00 3.56
360 370 2.289072 CGCTCTTCTTGTTCCTCTTGGA 60.289 50.000 0.00 0.00 41.36 3.53
390 400 6.990798 TCATGAGTGTCCATCTGATCTAATC 58.009 40.000 0.00 0.00 0.00 1.75
391 401 6.990908 TCATGAGTGTCCATCTGATCTAAT 57.009 37.500 0.00 0.00 0.00 1.73
392 402 6.990908 ATCATGAGTGTCCATCTGATCTAA 57.009 37.500 0.09 0.00 0.00 2.10
433 444 9.853177 ACAAACTAGGCAGAATAAATAATAGCT 57.147 29.630 0.00 0.00 0.00 3.32
434 445 9.884465 CACAAACTAGGCAGAATAAATAATAGC 57.116 33.333 0.00 0.00 0.00 2.97
437 448 8.190784 GCACACAAACTAGGCAGAATAAATAAT 58.809 33.333 0.00 0.00 0.00 1.28
438 449 7.393234 AGCACACAAACTAGGCAGAATAAATAA 59.607 33.333 0.00 0.00 0.00 1.40
439 450 6.884295 AGCACACAAACTAGGCAGAATAAATA 59.116 34.615 0.00 0.00 0.00 1.40
440 451 5.711976 AGCACACAAACTAGGCAGAATAAAT 59.288 36.000 0.00 0.00 0.00 1.40
441 452 5.048782 CAGCACACAAACTAGGCAGAATAAA 60.049 40.000 0.00 0.00 0.00 1.40
442 453 4.455533 CAGCACACAAACTAGGCAGAATAA 59.544 41.667 0.00 0.00 0.00 1.40
443 454 4.002982 CAGCACACAAACTAGGCAGAATA 58.997 43.478 0.00 0.00 0.00 1.75
444 455 2.816087 CAGCACACAAACTAGGCAGAAT 59.184 45.455 0.00 0.00 0.00 2.40
487 506 3.124806 GCACACATTCTCTCACATGACAG 59.875 47.826 0.00 0.00 0.00 3.51
501 520 1.610522 GGAAGCACTTGAGCACACATT 59.389 47.619 0.00 0.00 36.85 2.71
527 546 3.985279 GGTTGAATTTAAACCAGCGTTCC 59.015 43.478 10.39 0.00 45.41 3.62
575 600 6.186420 TGAGCAGCATCCCACTAATAATAA 57.814 37.500 0.00 0.00 0.00 1.40
576 601 5.823861 TGAGCAGCATCCCACTAATAATA 57.176 39.130 0.00 0.00 0.00 0.98
577 602 4.712051 TGAGCAGCATCCCACTAATAAT 57.288 40.909 0.00 0.00 0.00 1.28
583 608 0.111061 TTGTTGAGCAGCATCCCACT 59.889 50.000 0.00 0.00 0.00 4.00
624 650 7.770366 TCAGCTCAATTTCCAATATATGCAT 57.230 32.000 3.79 3.79 0.00 3.96
639 665 1.741706 CACAGCGGATTTCAGCTCAAT 59.258 47.619 2.07 0.00 45.29 2.57
647 673 1.266718 TGACAAAGCACAGCGGATTTC 59.733 47.619 0.00 0.00 0.00 2.17
652 678 1.587946 GTTTTTGACAAAGCACAGCGG 59.412 47.619 0.10 0.00 0.00 5.52
655 681 4.183101 ACATGGTTTTTGACAAAGCACAG 58.817 39.130 12.12 0.00 39.94 3.66
668 694 1.241315 CCTCGCGGGAACATGGTTTT 61.241 55.000 8.08 0.00 37.23 2.43
678 704 3.976490 ATCCTGGTTCCTCGCGGGA 62.976 63.158 8.08 10.34 43.41 5.14
679 705 2.925162 GAATCCTGGTTCCTCGCGGG 62.925 65.000 6.13 0.59 0.00 6.13
680 706 1.521681 GAATCCTGGTTCCTCGCGG 60.522 63.158 6.13 0.00 0.00 6.46
681 707 0.108138 AAGAATCCTGGTTCCTCGCG 60.108 55.000 0.00 0.00 0.00 5.87
682 708 1.066143 TGAAGAATCCTGGTTCCTCGC 60.066 52.381 0.00 0.00 0.00 5.03
683 709 2.234908 AGTGAAGAATCCTGGTTCCTCG 59.765 50.000 0.00 0.00 0.00 4.63
684 710 3.990959 AGTGAAGAATCCTGGTTCCTC 57.009 47.619 0.00 0.00 0.00 3.71
685 711 4.597507 TGTTAGTGAAGAATCCTGGTTCCT 59.402 41.667 0.00 0.00 0.00 3.36
686 712 4.906618 TGTTAGTGAAGAATCCTGGTTCC 58.093 43.478 0.00 0.00 0.00 3.62
687 713 5.940470 ACATGTTAGTGAAGAATCCTGGTTC 59.060 40.000 0.00 0.00 0.00 3.62
688 714 5.880901 ACATGTTAGTGAAGAATCCTGGTT 58.119 37.500 0.00 0.00 0.00 3.67
689 715 5.491982 GACATGTTAGTGAAGAATCCTGGT 58.508 41.667 0.00 0.00 0.00 4.00
690 716 4.878397 GGACATGTTAGTGAAGAATCCTGG 59.122 45.833 0.00 0.00 0.00 4.45
691 717 5.491070 TGGACATGTTAGTGAAGAATCCTG 58.509 41.667 0.00 0.00 0.00 3.86
694 720 9.132521 CAAATTTGGACATGTTAGTGAAGAATC 57.867 33.333 10.49 0.00 0.00 2.52
698 724 7.874940 TCTCAAATTTGGACATGTTAGTGAAG 58.125 34.615 17.90 3.28 0.00 3.02
699 725 7.815840 TCTCAAATTTGGACATGTTAGTGAA 57.184 32.000 17.90 0.00 0.00 3.18
702 728 8.084073 CACAATCTCAAATTTGGACATGTTAGT 58.916 33.333 17.90 3.65 0.00 2.24
705 731 7.053316 TCACAATCTCAAATTTGGACATGTT 57.947 32.000 17.90 3.60 0.00 2.71
706 732 6.653526 TCACAATCTCAAATTTGGACATGT 57.346 33.333 17.90 16.68 0.00 3.21
735 764 7.174080 TGAATGTGGATCGTAATCACAGAAAAA 59.826 33.333 7.62 0.00 33.21 1.94
741 770 4.273235 GCATGAATGTGGATCGTAATCACA 59.727 41.667 0.00 4.52 33.21 3.58
743 772 4.512571 CAGCATGAATGTGGATCGTAATCA 59.487 41.667 0.00 0.00 39.69 2.57
748 777 2.408271 ACAGCATGAATGTGGATCGT 57.592 45.000 0.00 0.00 39.69 3.73
768 797 1.035923 TGCAAGAAATTTGGGCACGA 58.964 45.000 0.00 0.00 0.00 4.35
770 799 3.434299 CAGAATGCAAGAAATTTGGGCAC 59.566 43.478 9.41 0.00 37.30 5.01
822 852 2.038952 TCTGACTCCCAAATCTGGTGTG 59.961 50.000 0.00 0.00 41.72 3.82
823 853 2.338809 TCTGACTCCCAAATCTGGTGT 58.661 47.619 0.00 0.00 41.72 4.16
931 967 0.326595 TGCCCTGCACTCCGATTTTA 59.673 50.000 0.00 0.00 31.71 1.52
932 968 0.962356 CTGCCCTGCACTCCGATTTT 60.962 55.000 0.00 0.00 33.79 1.82
989 1025 5.465935 ACAGATTTTATAGCGAGCTAGCTC 58.534 41.667 31.12 31.12 45.67 4.09
992 1028 6.306837 GCAGTACAGATTTTATAGCGAGCTAG 59.693 42.308 10.71 0.00 31.45 3.42
995 1032 4.150804 GGCAGTACAGATTTTATAGCGAGC 59.849 45.833 0.00 0.00 0.00 5.03
1008 1045 0.680280 GGGAGACGAGGCAGTACAGA 60.680 60.000 0.00 0.00 0.00 3.41
1012 1049 0.680280 GAGTGGGAGACGAGGCAGTA 60.680 60.000 0.00 0.00 0.00 2.74
1019 1056 1.906824 GGTGGTGAGTGGGAGACGA 60.907 63.158 0.00 0.00 0.00 4.20
1414 1456 1.975407 ACCACTTCATGCTGCTGGC 60.975 57.895 0.00 0.00 42.22 4.85
1655 1712 1.604378 CATCCCTCCGGCTTGAAGT 59.396 57.895 0.00 0.00 0.00 3.01
1808 1865 1.882623 GCCACTGTTTCTCCTTCCTTG 59.117 52.381 0.00 0.00 0.00 3.61
1845 1910 2.509931 TACTCTAGGCCGTGGCACCT 62.510 60.000 12.86 6.19 44.11 4.00
1882 1947 8.321353 TGGTGCTAGTAACAACTACTACTAGTA 58.679 37.037 14.53 1.89 44.96 1.82
1885 1950 6.094603 GCTGGTGCTAGTAACAACTACTACTA 59.905 42.308 0.00 0.00 41.35 1.82
1895 1960 1.608025 GCAGTGCTGGTGCTAGTAACA 60.608 52.381 8.18 0.00 40.48 2.41
1897 1962 3.532896 GCAGTGCTGGTGCTAGTAA 57.467 52.632 8.18 0.00 40.48 2.24
1917 1982 3.302365 TTTTTAGAGCAATGGCAGTGC 57.698 42.857 30.57 30.57 44.61 4.40
1920 1985 4.501071 AGCAATTTTTAGAGCAATGGCAG 58.499 39.130 0.00 0.00 44.61 4.85
1928 1993 5.772521 TCTGTTTGGAGCAATTTTTAGAGC 58.227 37.500 0.00 0.00 0.00 4.09
1929 1994 6.364435 GCTTCTGTTTGGAGCAATTTTTAGAG 59.636 38.462 0.00 0.00 0.00 2.43
1930 1995 6.183360 TGCTTCTGTTTGGAGCAATTTTTAGA 60.183 34.615 0.00 0.00 32.17 2.10
1931 1996 5.984926 TGCTTCTGTTTGGAGCAATTTTTAG 59.015 36.000 0.00 0.00 32.17 1.85
1946 2013 4.405116 TTGGAATTTTGCTGCTTCTGTT 57.595 36.364 0.00 0.00 0.00 3.16
1981 2060 3.003275 CCAATAACACGGCGCATAGAAAT 59.997 43.478 10.83 0.00 0.00 2.17
1982 2061 2.353269 CCAATAACACGGCGCATAGAAA 59.647 45.455 10.83 0.00 0.00 2.52
1985 2064 0.041312 GCCAATAACACGGCGCATAG 60.041 55.000 10.83 1.82 38.82 2.23
1996 2075 0.100503 GGTCGTGCCATGCCAATAAC 59.899 55.000 0.00 0.00 37.17 1.89
2012 2097 2.710440 GACTCTCTAGGAGGCGGTC 58.290 63.158 11.46 0.00 45.83 4.79
2039 2124 2.004733 GGCAAAGGCAAAATGATCTGC 58.995 47.619 0.00 0.00 43.71 4.26
2040 2125 3.604875 AGGCAAAGGCAAAATGATCTG 57.395 42.857 0.00 0.00 43.71 2.90
2041 2126 4.774200 ACTTAGGCAAAGGCAAAATGATCT 59.226 37.500 0.00 0.00 43.71 2.75
2042 2127 4.866486 CACTTAGGCAAAGGCAAAATGATC 59.134 41.667 3.43 0.00 43.71 2.92
2043 2128 4.322953 CCACTTAGGCAAAGGCAAAATGAT 60.323 41.667 3.43 0.00 43.71 2.45
2044 2129 3.006752 CCACTTAGGCAAAGGCAAAATGA 59.993 43.478 3.43 0.00 43.71 2.57
2045 2130 3.006752 TCCACTTAGGCAAAGGCAAAATG 59.993 43.478 3.43 0.00 43.71 2.32
2047 2132 2.672098 TCCACTTAGGCAAAGGCAAAA 58.328 42.857 3.43 0.00 43.71 2.44
2075 2188 3.441572 GTGGACACTTTTGAGATCCATGG 59.558 47.826 4.97 4.97 41.38 3.66
2083 2196 4.940046 AGCTGATATGTGGACACTTTTGAG 59.060 41.667 3.91 0.00 0.00 3.02
2087 2200 4.292186 ACAGCTGATATGTGGACACTTT 57.708 40.909 23.35 0.00 0.00 2.66
2088 2201 3.988976 ACAGCTGATATGTGGACACTT 57.011 42.857 23.35 0.12 0.00 3.16
2091 2204 4.536765 TCTCTACAGCTGATATGTGGACA 58.463 43.478 23.35 0.00 33.78 4.02
2095 2208 5.049129 TGACGATCTCTACAGCTGATATGTG 60.049 44.000 23.35 8.03 32.02 3.21
2097 2210 5.389778 GTGACGATCTCTACAGCTGATATG 58.610 45.833 23.35 7.92 0.00 1.78
2101 2214 1.666189 CGTGACGATCTCTACAGCTGA 59.334 52.381 23.35 2.95 0.00 4.26
2113 2226 2.631418 ACACTTCGATTCGTGACGAT 57.369 45.000 9.08 0.00 38.30 3.73
2117 2230 2.557056 AGGAGAACACTTCGATTCGTGA 59.443 45.455 14.46 0.00 35.23 4.35
2120 2233 5.230306 GTGATAAGGAGAACACTTCGATTCG 59.770 44.000 0.00 0.00 34.02 3.34
2125 2238 4.859798 GTCAGTGATAAGGAGAACACTTCG 59.140 45.833 0.00 0.00 40.84 3.79
2126 2239 5.172205 GGTCAGTGATAAGGAGAACACTTC 58.828 45.833 0.00 0.00 40.84 3.01
2127 2240 4.020128 GGGTCAGTGATAAGGAGAACACTT 60.020 45.833 0.00 0.00 40.84 3.16
2128 2241 3.515901 GGGTCAGTGATAAGGAGAACACT 59.484 47.826 0.00 0.00 43.05 3.55
2129 2242 3.260884 TGGGTCAGTGATAAGGAGAACAC 59.739 47.826 0.00 0.00 0.00 3.32
2131 2244 4.254492 GTTGGGTCAGTGATAAGGAGAAC 58.746 47.826 0.00 0.00 0.00 3.01
2132 2245 3.056107 CGTTGGGTCAGTGATAAGGAGAA 60.056 47.826 0.00 0.00 0.00 2.87
2133 2246 2.496070 CGTTGGGTCAGTGATAAGGAGA 59.504 50.000 0.00 0.00 0.00 3.71
2134 2247 2.496070 TCGTTGGGTCAGTGATAAGGAG 59.504 50.000 0.00 0.00 0.00 3.69
2135 2248 2.232941 GTCGTTGGGTCAGTGATAAGGA 59.767 50.000 0.00 1.48 0.00 3.36
2136 2249 2.233922 AGTCGTTGGGTCAGTGATAAGG 59.766 50.000 0.00 0.00 0.00 2.69
2137 2250 3.512680 GAGTCGTTGGGTCAGTGATAAG 58.487 50.000 0.00 0.00 0.00 1.73
2187 2300 3.549827 GGTTGTTTCGTGTGCATCATGAA 60.550 43.478 15.50 15.50 46.40 2.57
2189 2302 2.318578 GGTTGTTTCGTGTGCATCATG 58.681 47.619 0.00 0.00 34.61 3.07
2207 2320 1.717032 TGTTACTGAGCAGTCTGGGT 58.283 50.000 6.38 0.00 42.54 4.51
2208 2321 2.839486 TTGTTACTGAGCAGTCTGGG 57.161 50.000 6.38 0.00 42.54 4.45
2212 2325 9.319143 ACATCTTATATTTGTTACTGAGCAGTC 57.681 33.333 6.38 0.00 42.54 3.51
2223 2336 9.308000 TGTTTTGAGGGACATCTTATATTTGTT 57.692 29.630 0.00 0.00 0.00 2.83
2224 2337 8.877864 TGTTTTGAGGGACATCTTATATTTGT 57.122 30.769 0.00 0.00 0.00 2.83
2229 2342 9.137459 TGTTTTTGTTTTGAGGGACATCTTATA 57.863 29.630 0.00 0.00 0.00 0.98
2230 2343 8.017418 TGTTTTTGTTTTGAGGGACATCTTAT 57.983 30.769 0.00 0.00 0.00 1.73
2231 2344 7.411486 TGTTTTTGTTTTGAGGGACATCTTA 57.589 32.000 0.00 0.00 0.00 2.10
2232 2345 6.293004 TGTTTTTGTTTTGAGGGACATCTT 57.707 33.333 0.00 0.00 0.00 2.40
2233 2346 5.930837 TGTTTTTGTTTTGAGGGACATCT 57.069 34.783 0.00 0.00 0.00 2.90
2234 2347 6.976636 TTTGTTTTTGTTTTGAGGGACATC 57.023 33.333 0.00 0.00 0.00 3.06
2235 2348 7.751768 TTTTTGTTTTTGTTTTGAGGGACAT 57.248 28.000 0.00 0.00 0.00 3.06
2256 2369 2.427095 GACTCAGTTGTGGTGGCTTTTT 59.573 45.455 0.00 0.00 0.00 1.94
2257 2370 2.024414 GACTCAGTTGTGGTGGCTTTT 58.976 47.619 0.00 0.00 0.00 2.27
2258 2371 1.064758 TGACTCAGTTGTGGTGGCTTT 60.065 47.619 0.00 0.00 0.00 3.51
2259 2372 0.546122 TGACTCAGTTGTGGTGGCTT 59.454 50.000 0.00 0.00 0.00 4.35
2260 2373 0.179045 GTGACTCAGTTGTGGTGGCT 60.179 55.000 0.00 0.00 0.00 4.75
2261 2374 0.463654 TGTGACTCAGTTGTGGTGGC 60.464 55.000 0.00 0.00 0.00 5.01
2262 2375 1.586422 CTGTGACTCAGTTGTGGTGG 58.414 55.000 0.00 0.00 39.17 4.61
2263 2376 0.940126 GCTGTGACTCAGTTGTGGTG 59.060 55.000 6.40 0.00 45.23 4.17
2264 2377 0.541392 TGCTGTGACTCAGTTGTGGT 59.459 50.000 6.40 0.00 45.23 4.16
2265 2378 0.940126 GTGCTGTGACTCAGTTGTGG 59.060 55.000 6.40 0.00 45.23 4.17
2266 2379 1.655484 TGTGCTGTGACTCAGTTGTG 58.345 50.000 6.40 0.00 45.23 3.33
2267 2380 2.158914 TGATGTGCTGTGACTCAGTTGT 60.159 45.455 6.40 0.00 45.23 3.32
2268 2381 2.222678 GTGATGTGCTGTGACTCAGTTG 59.777 50.000 6.40 0.00 45.23 3.16
2269 2382 2.158914 TGTGATGTGCTGTGACTCAGTT 60.159 45.455 6.40 0.00 45.23 3.16
2270 2383 1.413812 TGTGATGTGCTGTGACTCAGT 59.586 47.619 6.40 0.00 45.23 3.41
2271 2384 2.067013 CTGTGATGTGCTGTGACTCAG 58.933 52.381 0.00 0.00 46.12 3.35
2272 2385 1.413812 ACTGTGATGTGCTGTGACTCA 59.586 47.619 0.00 0.00 0.00 3.41
2273 2386 2.160822 ACTGTGATGTGCTGTGACTC 57.839 50.000 0.00 0.00 0.00 3.36
2274 2387 3.181466 TGTTACTGTGATGTGCTGTGACT 60.181 43.478 0.00 0.00 0.00 3.41
2275 2388 3.130633 TGTTACTGTGATGTGCTGTGAC 58.869 45.455 0.00 0.00 0.00 3.67
2276 2389 3.467374 TGTTACTGTGATGTGCTGTGA 57.533 42.857 0.00 0.00 0.00 3.58
2277 2390 4.550577 TTTGTTACTGTGATGTGCTGTG 57.449 40.909 0.00 0.00 0.00 3.66
2278 2391 4.397730 TGTTTTGTTACTGTGATGTGCTGT 59.602 37.500 0.00 0.00 0.00 4.40
2279 2392 4.919206 TGTTTTGTTACTGTGATGTGCTG 58.081 39.130 0.00 0.00 0.00 4.41
2280 2393 5.574891 TTGTTTTGTTACTGTGATGTGCT 57.425 34.783 0.00 0.00 0.00 4.40
2281 2394 6.255453 ACAATTGTTTTGTTACTGTGATGTGC 59.745 34.615 4.92 0.00 0.00 4.57
2282 2395 7.487509 TGACAATTGTTTTGTTACTGTGATGTG 59.512 33.333 13.36 0.00 31.96 3.21
2283 2396 7.542890 TGACAATTGTTTTGTTACTGTGATGT 58.457 30.769 13.36 0.00 31.96 3.06
2284 2397 7.984002 TGACAATTGTTTTGTTACTGTGATG 57.016 32.000 13.36 0.00 31.96 3.07
2286 2399 9.509855 GTATTGACAATTGTTTTGTTACTGTGA 57.490 29.630 13.36 0.00 31.96 3.58
2287 2400 9.295214 TGTATTGACAATTGTTTTGTTACTGTG 57.705 29.630 13.36 0.00 31.96 3.66
2288 2401 9.296400 GTGTATTGACAATTGTTTTGTTACTGT 57.704 29.630 13.36 0.00 37.31 3.55
2289 2402 8.751335 GGTGTATTGACAATTGTTTTGTTACTG 58.249 33.333 13.36 0.00 37.31 2.74
2290 2403 8.470805 TGGTGTATTGACAATTGTTTTGTTACT 58.529 29.630 13.36 0.00 37.31 2.24
2291 2404 8.635877 TGGTGTATTGACAATTGTTTTGTTAC 57.364 30.769 13.36 10.77 37.31 2.50
2292 2405 9.088512 GTTGGTGTATTGACAATTGTTTTGTTA 57.911 29.630 13.36 0.00 37.31 2.41
2293 2406 7.604164 TGTTGGTGTATTGACAATTGTTTTGTT 59.396 29.630 13.36 0.00 37.31 2.83
2294 2407 7.099764 TGTTGGTGTATTGACAATTGTTTTGT 58.900 30.769 13.36 2.54 37.31 2.83
2295 2408 7.531280 TGTTGGTGTATTGACAATTGTTTTG 57.469 32.000 13.36 0.00 37.31 2.44
2296 2409 6.257630 GCTGTTGGTGTATTGACAATTGTTTT 59.742 34.615 13.36 3.48 37.31 2.43
2297 2410 5.752955 GCTGTTGGTGTATTGACAATTGTTT 59.247 36.000 13.36 3.84 37.31 2.83
2298 2411 5.163468 TGCTGTTGGTGTATTGACAATTGTT 60.163 36.000 13.36 0.00 37.31 2.83
2299 2412 4.340666 TGCTGTTGGTGTATTGACAATTGT 59.659 37.500 11.78 11.78 37.31 2.71
2300 2413 4.681025 GTGCTGTTGGTGTATTGACAATTG 59.319 41.667 5.89 3.24 37.31 2.32
2301 2414 4.261994 GGTGCTGTTGGTGTATTGACAATT 60.262 41.667 5.89 0.00 37.31 2.32
2302 2415 3.255642 GGTGCTGTTGGTGTATTGACAAT 59.744 43.478 5.87 5.87 37.31 2.71
2303 2416 2.621055 GGTGCTGTTGGTGTATTGACAA 59.379 45.455 0.00 0.00 37.31 3.18
2304 2417 2.226330 GGTGCTGTTGGTGTATTGACA 58.774 47.619 0.00 0.00 0.00 3.58
2305 2418 2.031157 GTGGTGCTGTTGGTGTATTGAC 60.031 50.000 0.00 0.00 0.00 3.18
2306 2419 2.226330 GTGGTGCTGTTGGTGTATTGA 58.774 47.619 0.00 0.00 0.00 2.57
2307 2420 1.952990 TGTGGTGCTGTTGGTGTATTG 59.047 47.619 0.00 0.00 0.00 1.90
2308 2421 2.356665 TGTGGTGCTGTTGGTGTATT 57.643 45.000 0.00 0.00 0.00 1.89
2309 2422 2.584835 ATGTGGTGCTGTTGGTGTAT 57.415 45.000 0.00 0.00 0.00 2.29
2310 2423 2.226330 GAATGTGGTGCTGTTGGTGTA 58.774 47.619 0.00 0.00 0.00 2.90
2311 2424 1.032014 GAATGTGGTGCTGTTGGTGT 58.968 50.000 0.00 0.00 0.00 4.16
2312 2425 0.314935 GGAATGTGGTGCTGTTGGTG 59.685 55.000 0.00 0.00 0.00 4.17
2313 2426 0.106268 TGGAATGTGGTGCTGTTGGT 60.106 50.000 0.00 0.00 0.00 3.67
2314 2427 0.599558 CTGGAATGTGGTGCTGTTGG 59.400 55.000 0.00 0.00 0.00 3.77
2315 2428 1.321474 ACTGGAATGTGGTGCTGTTG 58.679 50.000 0.00 0.00 0.00 3.33
2316 2429 2.949177 TACTGGAATGTGGTGCTGTT 57.051 45.000 0.00 0.00 0.00 3.16
2317 2430 4.164030 TCATATACTGGAATGTGGTGCTGT 59.836 41.667 0.00 0.00 0.00 4.40
2318 2431 4.707105 TCATATACTGGAATGTGGTGCTG 58.293 43.478 0.00 0.00 0.00 4.41
2319 2432 4.744867 GCTCATATACTGGAATGTGGTGCT 60.745 45.833 0.00 0.00 0.00 4.40
2320 2433 3.499918 GCTCATATACTGGAATGTGGTGC 59.500 47.826 0.00 0.00 0.00 5.01
2321 2434 3.742882 CGCTCATATACTGGAATGTGGTG 59.257 47.826 0.00 0.00 0.00 4.17
2322 2435 3.803715 GCGCTCATATACTGGAATGTGGT 60.804 47.826 0.00 0.00 0.00 4.16
2323 2436 2.738846 GCGCTCATATACTGGAATGTGG 59.261 50.000 0.00 0.00 0.00 4.17
2324 2437 3.657634 AGCGCTCATATACTGGAATGTG 58.342 45.455 2.64 0.00 0.00 3.21
2325 2438 4.060900 CAAGCGCTCATATACTGGAATGT 58.939 43.478 12.06 0.00 0.00 2.71
2326 2439 4.060900 ACAAGCGCTCATATACTGGAATG 58.939 43.478 12.06 2.30 0.00 2.67
2327 2440 4.060900 CACAAGCGCTCATATACTGGAAT 58.939 43.478 12.06 0.00 0.00 3.01
2328 2441 3.118775 ACACAAGCGCTCATATACTGGAA 60.119 43.478 12.06 0.00 0.00 3.53
2329 2442 2.430694 ACACAAGCGCTCATATACTGGA 59.569 45.455 12.06 0.00 0.00 3.86
2330 2443 2.797156 GACACAAGCGCTCATATACTGG 59.203 50.000 12.06 0.16 0.00 4.00
2331 2444 3.488678 CAGACACAAGCGCTCATATACTG 59.511 47.826 12.06 12.72 0.00 2.74
2332 2445 3.131223 ACAGACACAAGCGCTCATATACT 59.869 43.478 12.06 3.63 0.00 2.12
2333 2446 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
2334 2447 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
2335 2448 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
2336 2449 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
2337 2450 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
2338 2451 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
2339 2452 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
2340 2453 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
2341 2454 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
2342 2455 2.677199 ACATCAGTACAGACACAAGCG 58.323 47.619 0.00 0.00 0.00 4.68
2343 2456 6.539649 TTTAACATCAGTACAGACACAAGC 57.460 37.500 0.00 0.00 0.00 4.01
2369 2482 1.332686 GCGAACTGAGAACGGGTTTTT 59.667 47.619 0.00 0.00 0.00 1.94
2370 2483 0.942252 GCGAACTGAGAACGGGTTTT 59.058 50.000 0.00 0.00 0.00 2.43
2371 2484 0.179067 TGCGAACTGAGAACGGGTTT 60.179 50.000 0.00 0.00 0.00 3.27
2372 2485 0.878961 GTGCGAACTGAGAACGGGTT 60.879 55.000 0.00 0.00 0.00 4.11
2373 2486 1.300697 GTGCGAACTGAGAACGGGT 60.301 57.895 0.00 0.00 0.00 5.28
2374 2487 0.878523 TTGTGCGAACTGAGAACGGG 60.879 55.000 0.00 0.00 0.00 5.28
2375 2488 1.148310 ATTGTGCGAACTGAGAACGG 58.852 50.000 0.00 0.00 0.00 4.44
2376 2489 2.220824 TGAATTGTGCGAACTGAGAACG 59.779 45.455 0.00 0.00 0.00 3.95
2377 2490 3.878086 TGAATTGTGCGAACTGAGAAC 57.122 42.857 0.00 0.00 0.00 3.01
2378 2491 6.741992 ATATTGAATTGTGCGAACTGAGAA 57.258 33.333 0.00 0.00 0.00 2.87
2379 2492 6.183360 GGAATATTGAATTGTGCGAACTGAGA 60.183 38.462 0.00 0.00 0.00 3.27
2380 2493 5.967674 GGAATATTGAATTGTGCGAACTGAG 59.032 40.000 0.00 0.00 0.00 3.35
2381 2494 5.414144 TGGAATATTGAATTGTGCGAACTGA 59.586 36.000 0.00 0.00 0.00 3.41
2382 2495 5.639757 TGGAATATTGAATTGTGCGAACTG 58.360 37.500 0.00 0.00 0.00 3.16
2383 2496 5.415701 ACTGGAATATTGAATTGTGCGAACT 59.584 36.000 0.00 0.00 0.00 3.01
2384 2497 5.640732 ACTGGAATATTGAATTGTGCGAAC 58.359 37.500 0.00 0.00 0.00 3.95
2385 2498 5.895636 ACTGGAATATTGAATTGTGCGAA 57.104 34.783 0.00 0.00 0.00 4.70
2386 2499 5.007626 GCTACTGGAATATTGAATTGTGCGA 59.992 40.000 0.00 0.00 0.00 5.10
2387 2500 5.008019 AGCTACTGGAATATTGAATTGTGCG 59.992 40.000 0.00 0.00 0.00 5.34
2388 2501 6.382869 AGCTACTGGAATATTGAATTGTGC 57.617 37.500 0.00 0.00 0.00 4.57
2389 2502 7.438160 TCGTAGCTACTGGAATATTGAATTGTG 59.562 37.037 21.20 0.00 0.00 3.33
2390 2503 7.497595 TCGTAGCTACTGGAATATTGAATTGT 58.502 34.615 21.20 0.00 0.00 2.71
2391 2504 7.946655 TCGTAGCTACTGGAATATTGAATTG 57.053 36.000 21.20 0.59 0.00 2.32
2392 2505 9.209175 GAATCGTAGCTACTGGAATATTGAATT 57.791 33.333 21.20 7.48 0.00 2.17
2393 2506 7.542477 CGAATCGTAGCTACTGGAATATTGAAT 59.458 37.037 21.20 1.54 0.00 2.57
2394 2507 6.861572 CGAATCGTAGCTACTGGAATATTGAA 59.138 38.462 21.20 0.00 0.00 2.69
2395 2508 6.206048 TCGAATCGTAGCTACTGGAATATTGA 59.794 38.462 21.20 8.34 0.00 2.57
2396 2509 6.379386 TCGAATCGTAGCTACTGGAATATTG 58.621 40.000 21.20 3.04 0.00 1.90
2397 2510 6.430308 TCTCGAATCGTAGCTACTGGAATATT 59.570 38.462 21.20 10.60 0.00 1.28
2398 2511 5.938710 TCTCGAATCGTAGCTACTGGAATAT 59.061 40.000 21.20 4.08 0.00 1.28
2399 2512 5.303165 TCTCGAATCGTAGCTACTGGAATA 58.697 41.667 21.20 2.96 0.00 1.75
2400 2513 4.135306 TCTCGAATCGTAGCTACTGGAAT 58.865 43.478 21.20 5.74 0.00 3.01
2401 2514 3.538591 TCTCGAATCGTAGCTACTGGAA 58.461 45.455 21.20 5.12 0.00 3.53
2402 2515 3.189618 TCTCGAATCGTAGCTACTGGA 57.810 47.619 21.20 12.51 0.00 3.86
2403 2516 3.120130 GGATCTCGAATCGTAGCTACTGG 60.120 52.174 21.20 7.34 0.00 4.00
2404 2517 3.498777 TGGATCTCGAATCGTAGCTACTG 59.501 47.826 21.20 14.43 0.00 2.74
2405 2518 3.741249 TGGATCTCGAATCGTAGCTACT 58.259 45.455 21.20 2.91 0.00 2.57
2406 2519 3.120130 CCTGGATCTCGAATCGTAGCTAC 60.120 52.174 14.19 14.19 0.00 3.58
2407 2520 3.075148 CCTGGATCTCGAATCGTAGCTA 58.925 50.000 1.52 0.00 0.00 3.32
2408 2521 1.883275 CCTGGATCTCGAATCGTAGCT 59.117 52.381 1.52 0.00 0.00 3.32
2409 2522 1.609555 ACCTGGATCTCGAATCGTAGC 59.390 52.381 0.00 0.00 0.00 3.58
2410 2523 3.142951 AGACCTGGATCTCGAATCGTAG 58.857 50.000 0.00 0.00 0.00 3.51
2411 2524 3.139850 GAGACCTGGATCTCGAATCGTA 58.860 50.000 0.00 0.00 36.05 3.43
2412 2525 1.950909 GAGACCTGGATCTCGAATCGT 59.049 52.381 0.00 0.00 36.05 3.73
2413 2526 1.268352 GGAGACCTGGATCTCGAATCG 59.732 57.143 0.00 0.00 45.27 3.34
2428 2541 4.011698 GGAGTAGAATATCTCGGGGAGAC 58.988 52.174 0.00 0.00 41.76 3.36
2429 2542 3.307550 CGGAGTAGAATATCTCGGGGAGA 60.308 52.174 0.00 0.00 43.20 3.71
2430 2543 3.011119 CGGAGTAGAATATCTCGGGGAG 58.989 54.545 0.00 0.00 0.00 4.30
2431 2544 2.878935 GCGGAGTAGAATATCTCGGGGA 60.879 54.545 0.00 0.00 33.60 4.81
2432 2545 1.473278 GCGGAGTAGAATATCTCGGGG 59.527 57.143 0.00 0.00 33.60 5.73
2433 2546 2.420722 GAGCGGAGTAGAATATCTCGGG 59.579 54.545 0.00 0.00 33.60 5.14
2434 2547 3.340034 AGAGCGGAGTAGAATATCTCGG 58.660 50.000 0.00 0.00 35.25 4.63
2435 2548 5.408909 TGTAAGAGCGGAGTAGAATATCTCG 59.591 44.000 0.00 0.00 0.00 4.04
2436 2549 6.804770 TGTAAGAGCGGAGTAGAATATCTC 57.195 41.667 0.00 0.00 0.00 2.75
2437 2550 6.773685 ACTTGTAAGAGCGGAGTAGAATATCT 59.226 38.462 0.00 0.00 0.00 1.98
2438 2551 6.972722 ACTTGTAAGAGCGGAGTAGAATATC 58.027 40.000 0.00 0.00 0.00 1.63
2439 2552 6.963083 ACTTGTAAGAGCGGAGTAGAATAT 57.037 37.500 0.00 0.00 0.00 1.28
2440 2553 6.770746 AACTTGTAAGAGCGGAGTAGAATA 57.229 37.500 0.00 0.00 0.00 1.75
2441 2554 5.662674 AACTTGTAAGAGCGGAGTAGAAT 57.337 39.130 0.00 0.00 0.00 2.40
2442 2555 5.464030 AAACTTGTAAGAGCGGAGTAGAA 57.536 39.130 0.00 0.00 0.00 2.10
2443 2556 5.227908 CAAAACTTGTAAGAGCGGAGTAGA 58.772 41.667 0.00 0.00 0.00 2.59
2444 2557 4.389077 CCAAAACTTGTAAGAGCGGAGTAG 59.611 45.833 0.00 0.00 0.00 2.57
2445 2558 4.202284 ACCAAAACTTGTAAGAGCGGAGTA 60.202 41.667 0.00 0.00 0.00 2.59
2446 2559 3.139077 CCAAAACTTGTAAGAGCGGAGT 58.861 45.455 0.00 0.00 0.00 3.85
2447 2560 3.058914 CACCAAAACTTGTAAGAGCGGAG 60.059 47.826 0.00 0.00 0.00 4.63
2448 2561 2.875933 CACCAAAACTTGTAAGAGCGGA 59.124 45.455 0.00 0.00 0.00 5.54
2449 2562 2.616842 ACACCAAAACTTGTAAGAGCGG 59.383 45.455 0.00 0.00 0.00 5.52
2450 2563 3.064820 ACACACCAAAACTTGTAAGAGCG 59.935 43.478 0.00 0.00 0.00 5.03
2451 2564 4.632538 ACACACCAAAACTTGTAAGAGC 57.367 40.909 0.00 0.00 0.00 4.09
2452 2565 6.386654 ACAAACACACCAAAACTTGTAAGAG 58.613 36.000 0.00 0.00 0.00 2.85
2453 2566 6.334102 ACAAACACACCAAAACTTGTAAGA 57.666 33.333 0.00 0.00 0.00 2.10
2454 2567 6.642950 TGAACAAACACACCAAAACTTGTAAG 59.357 34.615 0.00 0.00 0.00 2.34
2455 2568 6.421202 GTGAACAAACACACCAAAACTTGTAA 59.579 34.615 0.00 0.00 40.11 2.41
2456 2569 5.921408 GTGAACAAACACACCAAAACTTGTA 59.079 36.000 0.00 0.00 40.11 2.41
2457 2570 4.747605 GTGAACAAACACACCAAAACTTGT 59.252 37.500 0.00 0.00 40.11 3.16
2458 2571 4.987912 AGTGAACAAACACACCAAAACTTG 59.012 37.500 0.00 0.00 42.45 3.16
2466 2579 3.876914 TGAGATGAGTGAACAAACACACC 59.123 43.478 0.00 0.00 42.45 4.16
2480 2593 6.047231 TGCATACAGACTGAAATGAGATGAG 58.953 40.000 19.87 0.00 0.00 2.90
2481 2594 5.981174 TGCATACAGACTGAAATGAGATGA 58.019 37.500 19.87 2.77 0.00 2.92
2499 2653 6.859017 TGAACGTTCTAGTATGAACTGCATA 58.141 36.000 27.32 0.00 42.82 3.14
2503 2657 7.847487 TGTTTTGAACGTTCTAGTATGAACTG 58.153 34.615 27.32 0.00 42.82 3.16
2566 2720 9.310449 GGAGATTAGTGAGGTTTAGGATATACA 57.690 37.037 0.00 0.00 0.00 2.29
2567 2721 8.751242 GGGAGATTAGTGAGGTTTAGGATATAC 58.249 40.741 0.00 0.00 0.00 1.47
2568 2722 7.899709 GGGGAGATTAGTGAGGTTTAGGATATA 59.100 40.741 0.00 0.00 0.00 0.86
2569 2723 6.731448 GGGGAGATTAGTGAGGTTTAGGATAT 59.269 42.308 0.00 0.00 0.00 1.63
2570 2724 6.082707 GGGGAGATTAGTGAGGTTTAGGATA 58.917 44.000 0.00 0.00 0.00 2.59
2571 2725 4.908481 GGGGAGATTAGTGAGGTTTAGGAT 59.092 45.833 0.00 0.00 0.00 3.24
2572 2726 4.015541 AGGGGAGATTAGTGAGGTTTAGGA 60.016 45.833 0.00 0.00 0.00 2.94
2573 2727 4.299485 AGGGGAGATTAGTGAGGTTTAGG 58.701 47.826 0.00 0.00 0.00 2.69
2574 2728 5.212745 AGAGGGGAGATTAGTGAGGTTTAG 58.787 45.833 0.00 0.00 0.00 1.85
2575 2729 5.222278 AGAGGGGAGATTAGTGAGGTTTA 57.778 43.478 0.00 0.00 0.00 2.01
2576 2730 4.081695 AGAGGGGAGATTAGTGAGGTTT 57.918 45.455 0.00 0.00 0.00 3.27
2577 2731 3.786213 AGAGGGGAGATTAGTGAGGTT 57.214 47.619 0.00 0.00 0.00 3.50
2578 2732 3.786213 AAGAGGGGAGATTAGTGAGGT 57.214 47.619 0.00 0.00 0.00 3.85
2579 2733 5.212745 AGTAAAGAGGGGAGATTAGTGAGG 58.787 45.833 0.00 0.00 0.00 3.86
2580 2734 6.800072 AAGTAAAGAGGGGAGATTAGTGAG 57.200 41.667 0.00 0.00 0.00 3.51
2581 2735 6.729100 TGAAAGTAAAGAGGGGAGATTAGTGA 59.271 38.462 0.00 0.00 0.00 3.41
2582 2736 6.947464 TGAAAGTAAAGAGGGGAGATTAGTG 58.053 40.000 0.00 0.00 0.00 2.74
2583 2737 7.569599 TTGAAAGTAAAGAGGGGAGATTAGT 57.430 36.000 0.00 0.00 0.00 2.24
2584 2738 8.049721 ACATTGAAAGTAAAGAGGGGAGATTAG 58.950 37.037 0.00 0.00 0.00 1.73
2585 2739 7.928873 ACATTGAAAGTAAAGAGGGGAGATTA 58.071 34.615 0.00 0.00 0.00 1.75
2586 2740 6.794534 ACATTGAAAGTAAAGAGGGGAGATT 58.205 36.000 0.00 0.00 0.00 2.40
2587 2741 6.394345 ACATTGAAAGTAAAGAGGGGAGAT 57.606 37.500 0.00 0.00 0.00 2.75
2588 2742 5.843019 ACATTGAAAGTAAAGAGGGGAGA 57.157 39.130 0.00 0.00 0.00 3.71
2618 2772 9.021807 CCTACGGACTAATCCTATAGAATTGAA 57.978 37.037 0.00 0.00 43.73 2.69
2619 2773 8.168725 ACCTACGGACTAATCCTATAGAATTGA 58.831 37.037 0.00 0.00 43.73 2.57
2620 2774 8.244802 CACCTACGGACTAATCCTATAGAATTG 58.755 40.741 0.00 0.00 43.73 2.32
2621 2775 7.093858 GCACCTACGGACTAATCCTATAGAATT 60.094 40.741 0.00 0.00 43.73 2.17
2622 2776 6.377712 GCACCTACGGACTAATCCTATAGAAT 59.622 42.308 0.00 0.00 43.73 2.40
2623 2777 5.709164 GCACCTACGGACTAATCCTATAGAA 59.291 44.000 0.00 0.00 43.73 2.10
2624 2778 5.221986 TGCACCTACGGACTAATCCTATAGA 60.222 44.000 0.00 0.00 43.73 1.98
2625 2779 5.008331 TGCACCTACGGACTAATCCTATAG 58.992 45.833 0.00 0.00 43.73 1.31
2626 2780 4.989277 TGCACCTACGGACTAATCCTATA 58.011 43.478 0.00 0.00 43.73 1.31
2627 2781 3.840991 TGCACCTACGGACTAATCCTAT 58.159 45.455 0.00 0.00 43.73 2.57
2628 2782 3.301794 TGCACCTACGGACTAATCCTA 57.698 47.619 0.00 0.00 43.73 2.94
2629 2783 2.154567 TGCACCTACGGACTAATCCT 57.845 50.000 0.00 0.00 43.73 3.24
2630 2784 2.364324 TGATGCACCTACGGACTAATCC 59.636 50.000 0.00 0.00 42.28 3.01
2631 2785 3.728076 TGATGCACCTACGGACTAATC 57.272 47.619 0.00 0.00 0.00 1.75
2632 2786 4.481368 TTTGATGCACCTACGGACTAAT 57.519 40.909 0.00 0.00 0.00 1.73
2633 2787 3.965379 TTTGATGCACCTACGGACTAA 57.035 42.857 0.00 0.00 0.00 2.24
2634 2788 3.259876 AGTTTTGATGCACCTACGGACTA 59.740 43.478 0.00 0.00 0.00 2.59
2635 2789 2.038557 AGTTTTGATGCACCTACGGACT 59.961 45.455 0.00 0.00 0.00 3.85
2636 2790 2.415512 GAGTTTTGATGCACCTACGGAC 59.584 50.000 0.00 0.00 0.00 4.79
2637 2791 2.301870 AGAGTTTTGATGCACCTACGGA 59.698 45.455 0.00 0.00 0.00 4.69
2638 2792 2.699954 AGAGTTTTGATGCACCTACGG 58.300 47.619 0.00 0.00 0.00 4.02
2639 2793 3.125316 GGAAGAGTTTTGATGCACCTACG 59.875 47.826 0.00 0.00 0.00 3.51
2640 2794 3.125316 CGGAAGAGTTTTGATGCACCTAC 59.875 47.826 0.00 0.00 0.00 3.18
2641 2795 3.334691 CGGAAGAGTTTTGATGCACCTA 58.665 45.455 0.00 0.00 0.00 3.08
2642 2796 2.154462 CGGAAGAGTTTTGATGCACCT 58.846 47.619 0.00 0.00 0.00 4.00
2643 2797 1.401539 GCGGAAGAGTTTTGATGCACC 60.402 52.381 0.00 0.00 0.00 5.01
2644 2798 1.537202 AGCGGAAGAGTTTTGATGCAC 59.463 47.619 0.00 0.00 0.00 4.57
2645 2799 1.806542 GAGCGGAAGAGTTTTGATGCA 59.193 47.619 0.00 0.00 0.00 3.96
2646 2800 1.806542 TGAGCGGAAGAGTTTTGATGC 59.193 47.619 0.00 0.00 0.00 3.91
2647 2801 3.242220 CGATGAGCGGAAGAGTTTTGATG 60.242 47.826 0.00 0.00 36.03 3.07
2648 2802 2.932614 CGATGAGCGGAAGAGTTTTGAT 59.067 45.455 0.00 0.00 36.03 2.57
2649 2803 2.337583 CGATGAGCGGAAGAGTTTTGA 58.662 47.619 0.00 0.00 36.03 2.69
2650 2804 2.795121 CGATGAGCGGAAGAGTTTTG 57.205 50.000 0.00 0.00 36.03 2.44
2661 2815 1.006805 GGAGATGGTCCGATGAGCG 60.007 63.158 0.00 0.00 41.98 5.03
2670 2824 4.873259 GCTGAACTAGAAAAGGAGATGGTC 59.127 45.833 0.00 0.00 0.00 4.02
2671 2825 4.287067 TGCTGAACTAGAAAAGGAGATGGT 59.713 41.667 0.00 0.00 0.00 3.55
2672 2826 4.633565 GTGCTGAACTAGAAAAGGAGATGG 59.366 45.833 0.00 0.00 0.00 3.51
2673 2827 5.240891 TGTGCTGAACTAGAAAAGGAGATG 58.759 41.667 0.00 0.00 0.00 2.90
2674 2828 5.489792 TGTGCTGAACTAGAAAAGGAGAT 57.510 39.130 0.00 0.00 0.00 2.75
2675 2829 4.955811 TGTGCTGAACTAGAAAAGGAGA 57.044 40.909 0.00 0.00 0.00 3.71
2676 2830 4.083590 GCTTGTGCTGAACTAGAAAAGGAG 60.084 45.833 1.14 0.00 33.94 3.69
2677 2831 3.815401 GCTTGTGCTGAACTAGAAAAGGA 59.185 43.478 1.14 0.00 33.94 3.36
2678 2832 3.057946 GGCTTGTGCTGAACTAGAAAAGG 60.058 47.826 1.14 0.00 39.59 3.11
2679 2833 3.565482 TGGCTTGTGCTGAACTAGAAAAG 59.435 43.478 1.14 0.00 39.59 2.27
2680 2834 3.550820 TGGCTTGTGCTGAACTAGAAAA 58.449 40.909 1.14 0.00 39.59 2.29
2681 2835 3.207265 TGGCTTGTGCTGAACTAGAAA 57.793 42.857 1.14 0.00 39.59 2.52
2682 2836 2.928801 TGGCTTGTGCTGAACTAGAA 57.071 45.000 1.14 0.00 39.59 2.10
2683 2837 2.928801 TTGGCTTGTGCTGAACTAGA 57.071 45.000 1.14 0.00 39.59 2.43
2684 2838 3.254166 ACATTTGGCTTGTGCTGAACTAG 59.746 43.478 0.00 0.00 39.59 2.57
2685 2839 3.004629 CACATTTGGCTTGTGCTGAACTA 59.995 43.478 3.55 0.00 38.18 2.24
2686 2840 2.034124 ACATTTGGCTTGTGCTGAACT 58.966 42.857 0.00 0.00 39.59 3.01
2687 2841 2.129607 CACATTTGGCTTGTGCTGAAC 58.870 47.619 3.55 0.00 38.18 3.18
2688 2842 1.755959 ACACATTTGGCTTGTGCTGAA 59.244 42.857 13.25 0.00 46.65 3.02
2689 2843 1.401761 ACACATTTGGCTTGTGCTGA 58.598 45.000 13.25 0.00 46.65 4.26
2690 2844 2.228138 AACACATTTGGCTTGTGCTG 57.772 45.000 13.25 2.13 46.65 4.41
2691 2845 2.937799 CAAAACACATTTGGCTTGTGCT 59.062 40.909 13.25 2.02 46.65 4.40
2692 2846 3.322230 CAAAACACATTTGGCTTGTGC 57.678 42.857 13.25 0.00 46.65 4.57
2700 2854 3.044986 CTCGAGCACCAAAACACATTTG 58.955 45.455 0.00 0.00 46.54 2.32
2701 2855 2.543653 GCTCGAGCACCAAAACACATTT 60.544 45.455 31.91 0.00 41.59 2.32
2702 2856 1.001378 GCTCGAGCACCAAAACACATT 60.001 47.619 31.91 0.00 41.59 2.71
2703 2857 0.593128 GCTCGAGCACCAAAACACAT 59.407 50.000 31.91 0.00 41.59 3.21
2704 2858 0.463654 AGCTCGAGCACCAAAACACA 60.464 50.000 36.87 0.00 45.16 3.72
2705 2859 0.235926 GAGCTCGAGCACCAAAACAC 59.764 55.000 36.87 13.38 45.16 3.32
2706 2860 2.616969 GAGCTCGAGCACCAAAACA 58.383 52.632 36.87 0.00 45.16 2.83
2713 2867 1.227205 CTCCATGGAGCTCGAGCAC 60.227 63.158 36.87 30.70 45.16 4.40
2714 2868 3.214253 CTCCATGGAGCTCGAGCA 58.786 61.111 36.87 19.08 45.16 4.26
2722 2876 5.248640 TCTCTTTTAAAGTGCTCCATGGAG 58.751 41.667 33.73 33.73 44.56 3.86
2723 2877 5.241403 TCTCTTTTAAAGTGCTCCATGGA 57.759 39.130 15.27 15.27 0.00 3.41
2724 2878 5.964958 TTCTCTTTTAAAGTGCTCCATGG 57.035 39.130 4.97 4.97 0.00 3.66
2725 2879 7.202526 TGTTTTCTCTTTTAAAGTGCTCCATG 58.797 34.615 4.53 0.00 0.00 3.66
2726 2880 7.346751 TGTTTTCTCTTTTAAAGTGCTCCAT 57.653 32.000 4.53 0.00 0.00 3.41
2727 2881 6.767524 TGTTTTCTCTTTTAAAGTGCTCCA 57.232 33.333 4.53 0.00 0.00 3.86
2728 2882 8.474006 TTTTGTTTTCTCTTTTAAAGTGCTCC 57.526 30.769 4.53 0.00 0.00 4.70
2729 2883 9.353999 TCTTTTGTTTTCTCTTTTAAAGTGCTC 57.646 29.630 4.53 0.00 0.00 4.26
2730 2884 9.705290 TTCTTTTGTTTTCTCTTTTAAAGTGCT 57.295 25.926 4.53 0.00 0.00 4.40
2742 2896 9.265938 GCTTTGAAACATTTCTTTTGTTTTCTC 57.734 29.630 5.97 0.00 44.90 2.87
2743 2897 9.002600 AGCTTTGAAACATTTCTTTTGTTTTCT 57.997 25.926 5.97 0.00 44.90 2.52
2744 2898 9.265938 GAGCTTTGAAACATTTCTTTTGTTTTC 57.734 29.630 5.97 0.00 44.90 2.29
2745 2899 8.782144 TGAGCTTTGAAACATTTCTTTTGTTTT 58.218 25.926 5.97 0.00 44.90 2.43
2746 2900 8.321650 TGAGCTTTGAAACATTTCTTTTGTTT 57.678 26.923 5.97 1.72 46.89 2.83
2747 2901 7.903995 TGAGCTTTGAAACATTTCTTTTGTT 57.096 28.000 5.97 0.00 38.91 2.83
2748 2902 7.903995 TTGAGCTTTGAAACATTTCTTTTGT 57.096 28.000 5.97 0.00 38.02 2.83
2749 2903 9.054191 GTTTTGAGCTTTGAAACATTTCTTTTG 57.946 29.630 12.73 0.00 38.02 2.44
2750 2904 8.782144 TGTTTTGAGCTTTGAAACATTTCTTTT 58.218 25.926 15.08 0.00 38.09 2.27
2751 2905 8.321650 TGTTTTGAGCTTTGAAACATTTCTTT 57.678 26.923 15.08 0.00 38.09 2.52
2752 2906 7.903995 TGTTTTGAGCTTTGAAACATTTCTT 57.096 28.000 15.08 0.00 38.09 2.52
2758 2912 8.465999 TCTTAGAATGTTTTGAGCTTTGAAACA 58.534 29.630 18.97 18.97 44.45 2.83
2759 2913 8.856490 TCTTAGAATGTTTTGAGCTTTGAAAC 57.144 30.769 11.40 11.40 34.67 2.78
2763 2917 9.897744 TGTATTCTTAGAATGTTTTGAGCTTTG 57.102 29.630 16.86 0.00 0.00 2.77
2771 2925 9.825972 CGTGTCAATGTATTCTTAGAATGTTTT 57.174 29.630 16.86 5.28 0.00 2.43
2772 2926 8.999431 ACGTGTCAATGTATTCTTAGAATGTTT 58.001 29.630 16.86 5.60 0.00 2.83
2773 2927 8.443160 CACGTGTCAATGTATTCTTAGAATGTT 58.557 33.333 16.86 6.91 0.00 2.71
2774 2928 7.817478 TCACGTGTCAATGTATTCTTAGAATGT 59.183 33.333 16.51 0.29 0.00 2.71
2775 2929 8.185003 TCACGTGTCAATGTATTCTTAGAATG 57.815 34.615 16.51 2.21 0.00 2.67
2776 2930 7.010552 GCTCACGTGTCAATGTATTCTTAGAAT 59.989 37.037 16.51 12.39 0.00 2.40
2777 2931 6.310467 GCTCACGTGTCAATGTATTCTTAGAA 59.690 38.462 16.51 0.00 0.00 2.10
2778 2932 5.805486 GCTCACGTGTCAATGTATTCTTAGA 59.195 40.000 16.51 0.00 0.00 2.10
2779 2933 5.807520 AGCTCACGTGTCAATGTATTCTTAG 59.192 40.000 16.51 0.98 0.00 2.18
2780 2934 5.720202 AGCTCACGTGTCAATGTATTCTTA 58.280 37.500 16.51 0.00 0.00 2.10
2781 2935 4.569943 AGCTCACGTGTCAATGTATTCTT 58.430 39.130 16.51 0.00 0.00 2.52
2782 2936 4.193826 AGCTCACGTGTCAATGTATTCT 57.806 40.909 16.51 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.