Multiple sequence alignment - TraesCS5D01G425600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G425600 chr5D 100.000 4107 0 0 1 4107 484416430 484412324 0.000000e+00 7585.0
1 TraesCS5D01G425600 chr5D 90.722 291 21 3 427 717 484567576 484567292 2.320000e-102 383.0
2 TraesCS5D01G425600 chr5D 83.529 425 49 12 1347 1766 484308155 484307747 1.080000e-100 377.0
3 TraesCS5D01G425600 chr5D 87.421 318 40 0 3 320 484568304 484567987 2.330000e-97 366.0
4 TraesCS5D01G425600 chr5D 76.722 421 63 28 1152 1570 454119667 454120054 6.960000e-48 202.0
5 TraesCS5D01G425600 chr5D 74.204 628 97 43 1151 1757 484404079 484403496 6.960000e-48 202.0
6 TraesCS5D01G425600 chr5D 77.215 237 35 15 2883 3106 418430495 418430725 2.010000e-23 121.0
7 TraesCS5D01G425600 chr5B 90.339 2774 162 55 741 3476 595624645 595621940 0.000000e+00 3541.0
8 TraesCS5D01G425600 chr5B 87.133 715 77 3 3 717 595653381 595652682 0.000000e+00 797.0
9 TraesCS5D01G425600 chr5B 91.183 465 35 2 259 723 595625149 595624691 9.690000e-176 627.0
10 TraesCS5D01G425600 chr5B 81.352 429 44 17 1347 1766 595377714 595377313 2.380000e-82 316.0
11 TraesCS5D01G425600 chr5B 84.270 178 21 6 1574 1751 595351266 595351096 2.540000e-37 167.0
12 TraesCS5D01G425600 chr5B 77.021 235 39 9 2883 3106 505770672 505770902 2.010000e-23 121.0
13 TraesCS5D01G425600 chr5B 97.143 35 1 0 1 35 595625178 595625144 4.430000e-05 60.2
14 TraesCS5D01G425600 chr5A 89.448 2246 145 53 1324 3550 606051586 606049414 0.000000e+00 2750.0
15 TraesCS5D01G425600 chr5A 92.740 1281 71 8 1 1281 606053999 606052741 0.000000e+00 1831.0
16 TraesCS5D01G425600 chr5A 86.154 715 85 10 3 717 606154107 606153407 0.000000e+00 760.0
17 TraesCS5D01G425600 chr5A 80.095 422 49 26 1347 1751 606018798 606018395 8.690000e-72 281.0
18 TraesCS5D01G425600 chr5A 76.250 240 37 16 2883 3106 533281481 533281716 4.340000e-20 110.0
19 TraesCS5D01G425600 chr2B 86.339 549 64 11 2231 2776 250070711 250070171 4.570000e-164 588.0
20 TraesCS5D01G425600 chr2B 81.574 521 75 17 2772 3281 250070139 250069629 1.060000e-110 411.0
21 TraesCS5D01G425600 chr2B 92.553 94 6 1 1345 1437 734856374 734856467 2.580000e-27 134.0
22 TraesCS5D01G425600 chr2D 86.182 550 67 8 2231 2776 194192176 194191632 1.640000e-163 586.0
23 TraesCS5D01G425600 chr2D 81.905 525 70 17 2772 3281 194191600 194191086 1.770000e-113 420.0
24 TraesCS5D01G425600 chr2A 83.442 459 59 9 2231 2688 208151335 208150893 1.060000e-110 411.0
25 TraesCS5D01G425600 chr2A 84.239 184 21 5 447 629 65088117 65088293 5.460000e-39 172.0
26 TraesCS5D01G425600 chr1A 77.311 357 59 16 2796 3146 545893531 545893191 1.510000e-44 191.0
27 TraesCS5D01G425600 chr6A 87.195 164 21 0 480 643 30422796 30422633 1.950000e-43 187.0
28 TraesCS5D01G425600 chr6A 79.167 120 17 6 181 299 31160327 31160215 4.400000e-10 76.8
29 TraesCS5D01G425600 chr6B 80.995 221 29 11 446 662 82004838 82004627 3.280000e-36 163.0
30 TraesCS5D01G425600 chr6B 95.455 44 2 0 205 248 60594236 60594193 2.050000e-08 71.3
31 TraesCS5D01G425600 chr6B 94.286 35 2 0 23 57 75670519 75670553 2.000000e-03 54.7
32 TraesCS5D01G425600 chr1D 80.426 235 28 11 1345 1574 486866766 486866545 3.280000e-36 163.0
33 TraesCS5D01G425600 chrUn 80.543 221 30 10 446 662 27073318 27073107 1.530000e-34 158.0
34 TraesCS5D01G425600 chrUn 78.443 167 23 11 181 342 76751362 76751520 3.380000e-16 97.1
35 TraesCS5D01G425600 chr7B 92.553 94 6 1 1345 1437 636626304 636626211 2.580000e-27 134.0
36 TraesCS5D01G425600 chr7B 76.496 234 40 8 2883 3106 614294188 614293960 3.360000e-21 113.0
37 TraesCS5D01G425600 chr7A 76.923 234 40 11 2883 3106 649477707 649477478 2.010000e-23 121.0
38 TraesCS5D01G425600 chr7D 75.820 244 40 13 2876 3106 564534691 564534928 5.610000e-19 106.0
39 TraesCS5D01G425600 chr6D 80.000 125 16 7 173 296 27126485 27126601 2.630000e-12 84.2
40 TraesCS5D01G425600 chr6D 80.000 125 16 7 173 296 27209222 27209338 2.630000e-12 84.2
41 TraesCS5D01G425600 chr6D 94.286 35 2 0 23 57 36124455 36124489 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G425600 chr5D 484412324 484416430 4106 True 7585.0 7585 100.000000 1 4107 1 chr5D.!!$R3 4106
1 TraesCS5D01G425600 chr5D 484567292 484568304 1012 True 374.5 383 89.071500 3 717 2 chr5D.!!$R4 714
2 TraesCS5D01G425600 chr5D 484403496 484404079 583 True 202.0 202 74.204000 1151 1757 1 chr5D.!!$R2 606
3 TraesCS5D01G425600 chr5B 595621940 595625178 3238 True 1409.4 3541 92.888333 1 3476 3 chr5B.!!$R4 3475
4 TraesCS5D01G425600 chr5B 595652682 595653381 699 True 797.0 797 87.133000 3 717 1 chr5B.!!$R3 714
5 TraesCS5D01G425600 chr5A 606049414 606053999 4585 True 2290.5 2750 91.094000 1 3550 2 chr5A.!!$R3 3549
6 TraesCS5D01G425600 chr5A 606153407 606154107 700 True 760.0 760 86.154000 3 717 1 chr5A.!!$R2 714
7 TraesCS5D01G425600 chr2B 250069629 250070711 1082 True 499.5 588 83.956500 2231 3281 2 chr2B.!!$R1 1050
8 TraesCS5D01G425600 chr2D 194191086 194192176 1090 True 503.0 586 84.043500 2231 3281 2 chr2D.!!$R1 1050

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
742 1069 0.319900 GTTCAGAACAGAGCTGCCGA 60.320 55.000 8.54 0.00 33.45 5.54 F
786 1151 0.620700 ATGGGCCTAGGAGTCGGTTT 60.621 55.000 14.75 0.00 0.00 3.27 F
1157 1528 0.890996 CTGGTGCTTGTGGGTTCTCC 60.891 60.000 0.00 0.00 0.00 3.71 F
1168 1539 1.207089 TGGGTTCTCCGTGATGATCAC 59.793 52.381 15.36 15.36 43.65 3.06 F
1265 1636 1.273327 GGCTGTGTTATGCTTTTGCCT 59.727 47.619 0.00 0.00 46.87 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2321 3870 1.070604 CATGCCATCATAGGACCCCT 58.929 55.000 0.0 0.0 37.71 4.79 R
2616 4167 4.065088 TGTATTGAGTGACCTTGTGAAGC 58.935 43.478 0.0 0.0 0.00 3.86 R
3047 4647 2.523015 GATCTCAAAATGCTTGCACCG 58.477 47.619 0.0 0.0 0.00 4.94 R
3094 4694 5.810074 GGTGAAAGCAATCTAGAAGAGAGAC 59.190 44.000 0.0 0.0 37.70 3.36 R
3240 4840 3.855689 AAGATCATTTTGCCAAGTCGG 57.144 42.857 0.0 0.0 38.11 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 3.741476 CAGCCGCTTGTTCTGCCC 61.741 66.667 0.00 0.00 0.00 5.36
314 315 3.554692 GATGTTCGAGCGGCCGTG 61.555 66.667 28.70 17.20 0.00 4.94
400 721 1.152096 AAGGAGAGGACGTTGGGGT 60.152 57.895 0.00 0.00 0.00 4.95
403 724 3.644399 GAGAGGACGTTGGGGTCGC 62.644 68.421 0.00 0.00 37.82 5.19
462 783 0.873743 CCTCGAAGAAGCCGATCAGC 60.874 60.000 0.00 0.00 34.09 4.26
718 1045 2.770164 ACTCCTCTGGAAAACCGATG 57.230 50.000 0.00 0.00 0.00 3.84
723 1050 3.055819 TCCTCTGGAAAACCGATGAGAAG 60.056 47.826 0.00 0.00 0.00 2.85
725 1052 4.319177 CTCTGGAAAACCGATGAGAAGTT 58.681 43.478 0.00 0.00 0.00 2.66
726 1053 4.315803 TCTGGAAAACCGATGAGAAGTTC 58.684 43.478 0.00 0.00 0.00 3.01
727 1054 4.065088 CTGGAAAACCGATGAGAAGTTCA 58.935 43.478 5.50 0.00 40.85 3.18
728 1055 4.065088 TGGAAAACCGATGAGAAGTTCAG 58.935 43.478 5.50 0.00 39.68 3.02
731 1058 5.334182 GGAAAACCGATGAGAAGTTCAGAAC 60.334 44.000 5.00 5.00 39.68 3.01
732 1059 4.336889 AACCGATGAGAAGTTCAGAACA 57.663 40.909 15.85 0.53 39.68 3.18
733 1060 3.919216 ACCGATGAGAAGTTCAGAACAG 58.081 45.455 15.85 0.00 39.68 3.16
734 1061 3.574396 ACCGATGAGAAGTTCAGAACAGA 59.426 43.478 15.85 0.00 39.68 3.41
735 1062 4.172505 CCGATGAGAAGTTCAGAACAGAG 58.827 47.826 15.85 0.00 39.68 3.35
736 1063 3.611986 CGATGAGAAGTTCAGAACAGAGC 59.388 47.826 15.85 3.13 39.68 4.09
737 1064 4.617995 CGATGAGAAGTTCAGAACAGAGCT 60.618 45.833 15.85 6.51 39.68 4.09
738 1065 3.987547 TGAGAAGTTCAGAACAGAGCTG 58.012 45.455 15.85 0.00 34.71 4.24
739 1066 2.736192 GAGAAGTTCAGAACAGAGCTGC 59.264 50.000 15.85 0.00 33.45 5.25
740 1067 1.803555 GAAGTTCAGAACAGAGCTGCC 59.196 52.381 15.85 0.00 33.45 4.85
741 1068 0.320247 AGTTCAGAACAGAGCTGCCG 60.320 55.000 15.85 0.00 33.45 5.69
742 1069 0.319900 GTTCAGAACAGAGCTGCCGA 60.320 55.000 8.54 0.00 33.45 5.54
743 1070 0.319900 TTCAGAACAGAGCTGCCGAC 60.320 55.000 0.00 0.00 33.45 4.79
744 1071 1.739562 CAGAACAGAGCTGCCGACC 60.740 63.158 0.00 0.00 0.00 4.79
745 1072 2.435059 GAACAGAGCTGCCGACCC 60.435 66.667 0.00 0.00 0.00 4.46
757 1084 1.364171 CCGACCCGTCATCTCATCC 59.636 63.158 0.00 0.00 0.00 3.51
767 1132 3.005155 CGTCATCTCATCCTATGTGAGCA 59.995 47.826 0.00 0.00 42.17 4.26
786 1151 0.620700 ATGGGCCTAGGAGTCGGTTT 60.621 55.000 14.75 0.00 0.00 3.27
1009 1380 2.748251 CCGCCGCCATGGTTTGTA 60.748 61.111 14.67 0.00 41.21 2.41
1116 1487 4.135306 TCGTGTTTACCAATTGTTGCCTA 58.865 39.130 4.43 0.00 0.00 3.93
1157 1528 0.890996 CTGGTGCTTGTGGGTTCTCC 60.891 60.000 0.00 0.00 0.00 3.71
1168 1539 1.207089 TGGGTTCTCCGTGATGATCAC 59.793 52.381 15.36 15.36 43.65 3.06
1179 1550 3.393800 GTGATGATCACCACCGATTAGG 58.606 50.000 14.48 0.00 41.37 2.69
1265 1636 1.273327 GGCTGTGTTATGCTTTTGCCT 59.727 47.619 0.00 0.00 46.87 4.75
1364 2889 5.724328 TGGTAGTTCTCTGTGATGATGAAC 58.276 41.667 0.00 0.00 37.76 3.18
1430 2956 2.322355 ATCGAGGCATTTGTCTGAGG 57.678 50.000 0.00 0.00 0.00 3.86
1458 2984 6.014669 ACATTGTTTGCTTAGCCATTTCCTTA 60.015 34.615 0.29 0.00 0.00 2.69
1461 2987 3.364460 TGCTTAGCCATTTCCTTAGCA 57.636 42.857 0.29 0.00 41.13 3.49
1476 3002 4.074970 CCTTAGCACATTTTCTCCACTGT 58.925 43.478 0.00 0.00 0.00 3.55
1515 3047 1.832219 CCGGCATGATGAGGAAGGA 59.168 57.895 0.00 0.00 0.00 3.36
1547 3081 8.530269 TGTCTGATCTATTTGATGATGAATCG 57.470 34.615 0.00 0.00 38.22 3.34
1558 3092 7.524717 TTGATGATGAATCGTCCTACTCATA 57.475 36.000 9.48 0.00 41.12 2.15
1561 3095 7.883311 TGATGATGAATCGTCCTACTCATACTA 59.117 37.037 9.48 0.00 41.12 1.82
1565 3099 9.347934 GATGAATCGTCCTACTCATACTAAATG 57.652 37.037 0.00 0.00 0.00 2.32
1566 3100 8.234136 TGAATCGTCCTACTCATACTAAATGT 57.766 34.615 0.00 0.00 0.00 2.71
1567 3101 8.350722 TGAATCGTCCTACTCATACTAAATGTC 58.649 37.037 0.00 0.00 0.00 3.06
1568 3102 7.818997 ATCGTCCTACTCATACTAAATGTCA 57.181 36.000 0.00 0.00 0.00 3.58
1569 3103 7.634671 TCGTCCTACTCATACTAAATGTCAA 57.365 36.000 0.00 0.00 0.00 3.18
1570 3104 8.058667 TCGTCCTACTCATACTAAATGTCAAA 57.941 34.615 0.00 0.00 0.00 2.69
1571 3105 7.972277 TCGTCCTACTCATACTAAATGTCAAAC 59.028 37.037 0.00 0.00 0.00 2.93
1572 3106 7.044249 CGTCCTACTCATACTAAATGTCAAACG 60.044 40.741 0.00 0.00 0.00 3.60
1593 3127 1.728971 GTCAAACCGACTGCAGATCTG 59.271 52.381 23.35 18.84 41.81 2.90
1619 3155 7.412020 GCTTTGCTGAACTAGTTGTGTAGATAC 60.412 40.741 14.14 0.00 0.00 2.24
1647 3183 6.779860 AGAATAGTTGTTTCCTCTTTGCCTA 58.220 36.000 0.00 0.00 0.00 3.93
1668 3204 7.450014 TGCCTATGAAATTAACTTCAGTTTGGA 59.550 33.333 5.51 0.00 38.66 3.53
1697 3233 8.187913 TGAAATGATAAAGAACAATTGGTCCA 57.812 30.769 19.90 10.56 30.36 4.02
1738 3274 6.128309 TGTGATGATGTCCAATAAAACACTCG 60.128 38.462 0.00 0.00 0.00 4.18
1749 3285 6.183360 CCAATAAAACACTCGATGCTTCTGAT 60.183 38.462 0.00 0.00 0.00 2.90
1824 3360 3.621268 TGCACCGATGAGCTGTATTTTAC 59.379 43.478 0.00 0.00 0.00 2.01
1878 3414 8.094548 AGTTACTGTGTATGAGATGTGCTTTAA 58.905 33.333 0.00 0.00 0.00 1.52
1934 3470 2.299867 GCTGGCCTTTTTCCAAAGATGA 59.700 45.455 3.32 0.00 41.97 2.92
1970 3507 5.164177 CGTCGTGTCAGAAACAAGTCTAATC 60.164 44.000 0.00 0.00 40.31 1.75
2188 3726 9.577222 AACCTAAAACTAAACTTACAGCCATTA 57.423 29.630 0.00 0.00 0.00 1.90
2219 3764 2.134287 GCCCCGAGCAGACCATCTA 61.134 63.158 0.00 0.00 42.97 1.98
2255 3800 9.886132 ACTTCTTTCTTACCACGTGATAATATT 57.114 29.630 19.30 0.00 0.00 1.28
2345 3894 4.263905 GGGGTCCTATGATGGCATGAAATA 60.264 45.833 3.81 0.00 35.94 1.40
2862 4454 4.523943 AGATTAAAGCCAGTTGTGCAATGA 59.476 37.500 0.00 0.00 0.00 2.57
2864 4456 2.736144 AAGCCAGTTGTGCAATGATG 57.264 45.000 0.00 0.00 0.00 3.07
2974 4566 3.653344 GCCATCAAGGTTTGTTCCTTTC 58.347 45.455 0.00 0.00 44.36 2.62
2975 4567 3.554960 GCCATCAAGGTTTGTTCCTTTCC 60.555 47.826 0.00 0.00 44.36 3.13
2977 4569 4.262164 CCATCAAGGTTTGTTCCTTTCCTG 60.262 45.833 0.00 0.00 44.36 3.86
2978 4570 4.243793 TCAAGGTTTGTTCCTTTCCTGA 57.756 40.909 0.00 0.00 44.36 3.86
2983 4575 4.584743 AGGTTTGTTCCTTTCCTGATGAAC 59.415 41.667 0.00 0.00 38.03 3.18
2984 4576 4.584743 GGTTTGTTCCTTTCCTGATGAACT 59.415 41.667 0.00 0.00 38.29 3.01
2985 4577 5.507985 GGTTTGTTCCTTTCCTGATGAACTG 60.508 44.000 0.00 0.00 38.29 3.16
2997 4589 5.471116 TCCTGATGAACTGACTGAACATTTG 59.529 40.000 0.00 0.00 0.00 2.32
3003 4596 6.918626 TGAACTGACTGAACATTTGTTTTCA 58.081 32.000 0.00 0.00 38.56 2.69
3039 4632 6.605471 TTGCTCAGTCTGTCTTTATTCCTA 57.395 37.500 0.00 0.00 0.00 2.94
3040 4633 6.798427 TGCTCAGTCTGTCTTTATTCCTAT 57.202 37.500 0.00 0.00 0.00 2.57
3041 4634 6.577103 TGCTCAGTCTGTCTTTATTCCTATG 58.423 40.000 0.00 0.00 0.00 2.23
3047 4647 5.007136 GTCTGTCTTTATTCCTATGTGCAGC 59.993 44.000 0.00 0.00 0.00 5.25
3094 4694 0.537371 ACAAGAAGGGCAAGGGAACG 60.537 55.000 0.00 0.00 0.00 3.95
3161 4761 9.141400 GGTCAAGAACTATTACTACTTGTCTTG 57.859 37.037 0.00 0.00 38.94 3.02
3199 4799 4.389374 TGAGTTGAATTGACCAGACCTTC 58.611 43.478 0.00 0.00 0.00 3.46
3201 4801 5.306937 TGAGTTGAATTGACCAGACCTTCTA 59.693 40.000 0.00 0.00 0.00 2.10
3240 4840 1.538047 TCTGGCATTTGAGCAAGGAC 58.462 50.000 0.00 0.00 36.19 3.85
3265 4867 5.107760 CGACTTGGCAAAATGATCTTTTGTG 60.108 40.000 21.15 15.54 40.47 3.33
3276 4878 3.511146 TGATCTTTTGTGGCTTGAATCCC 59.489 43.478 0.00 0.00 0.00 3.85
3287 4889 4.711355 TGGCTTGAATCCCCTTTTAATCTG 59.289 41.667 0.00 0.00 0.00 2.90
3291 4893 5.796502 TGAATCCCCTTTTAATCTGAGGT 57.203 39.130 0.00 0.00 0.00 3.85
3292 4894 5.509498 TGAATCCCCTTTTAATCTGAGGTG 58.491 41.667 0.00 0.00 0.00 4.00
3293 4895 3.366052 TCCCCTTTTAATCTGAGGTGC 57.634 47.619 0.00 0.00 0.00 5.01
3298 4900 2.877097 TTTAATCTGAGGTGCTGCCA 57.123 45.000 0.00 0.00 40.61 4.92
3301 4903 2.338577 AATCTGAGGTGCTGCCATAC 57.661 50.000 0.00 0.00 40.61 2.39
3302 4904 1.504912 ATCTGAGGTGCTGCCATACT 58.495 50.000 0.00 0.00 40.61 2.12
3305 4907 0.692476 TGAGGTGCTGCCATACTGTT 59.308 50.000 0.00 0.00 40.61 3.16
3308 4910 0.804989 GGTGCTGCCATACTGTTGAC 59.195 55.000 0.00 0.00 37.17 3.18
3312 4914 2.290197 TGCTGCCATACTGTTGACATGA 60.290 45.455 0.00 0.00 0.00 3.07
3330 4932 1.271325 TGAATGTCCTGTGCACCGATT 60.271 47.619 15.69 3.87 0.00 3.34
3373 4976 3.129287 GCTGCTGTTTATATGCTGTTGGT 59.871 43.478 0.00 0.00 0.00 3.67
3391 4996 6.957631 TGTTGGTGGACAGATATGATAACTT 58.042 36.000 0.00 0.00 0.00 2.66
3392 4997 8.084985 TGTTGGTGGACAGATATGATAACTTA 57.915 34.615 0.00 0.00 0.00 2.24
3395 5000 8.727100 TGGTGGACAGATATGATAACTTATCT 57.273 34.615 9.69 3.42 41.20 1.98
3406 5011 6.656632 TGATAACTTATCTAGGCAGGACTG 57.343 41.667 9.69 0.00 36.17 3.51
3408 5013 3.406512 ACTTATCTAGGCAGGACTGGT 57.593 47.619 1.01 0.00 0.00 4.00
3414 5019 4.487714 TCTAGGCAGGACTGGTAAAATG 57.512 45.455 1.01 0.00 0.00 2.32
3416 5021 0.817654 GGCAGGACTGGTAAAATGCC 59.182 55.000 1.01 0.00 45.61 4.40
3417 5022 1.839424 GCAGGACTGGTAAAATGCCT 58.161 50.000 1.01 0.00 0.00 4.75
3418 5023 2.999331 GCAGGACTGGTAAAATGCCTA 58.001 47.619 1.01 0.00 0.00 3.93
3443 5048 1.620323 TGGACAGTGTCAGTGAGATGG 59.380 52.381 24.20 0.00 33.68 3.51
3458 5063 5.888161 AGTGAGATGGTTTGTGATTAATCCC 59.112 40.000 12.90 6.84 0.00 3.85
3476 5081 3.654273 TCCCGAGGGAATGAATCTAAGT 58.346 45.455 8.71 0.00 42.05 2.24
3478 5083 3.388024 CCCGAGGGAATGAATCTAAGTGA 59.612 47.826 0.84 0.00 37.50 3.41
3480 5085 4.502259 CCGAGGGAATGAATCTAAGTGAGG 60.502 50.000 0.00 0.00 0.00 3.86
3481 5086 4.100189 CGAGGGAATGAATCTAAGTGAGGT 59.900 45.833 0.00 0.00 0.00 3.85
3482 5087 5.606505 GAGGGAATGAATCTAAGTGAGGTC 58.393 45.833 0.00 0.00 0.00 3.85
3497 5110 2.568956 TGAGGTCTATGCTTGCTGTCTT 59.431 45.455 0.00 0.00 0.00 3.01
3498 5111 3.769300 TGAGGTCTATGCTTGCTGTCTTA 59.231 43.478 0.00 0.00 0.00 2.10
3499 5112 4.406972 TGAGGTCTATGCTTGCTGTCTTAT 59.593 41.667 0.00 0.00 0.00 1.73
3500 5113 4.701765 AGGTCTATGCTTGCTGTCTTATG 58.298 43.478 0.00 0.00 0.00 1.90
3501 5114 3.812053 GGTCTATGCTTGCTGTCTTATGG 59.188 47.826 0.00 0.00 0.00 2.74
3502 5115 3.812053 GTCTATGCTTGCTGTCTTATGGG 59.188 47.826 0.00 0.00 0.00 4.00
3503 5116 1.396653 ATGCTTGCTGTCTTATGGGC 58.603 50.000 0.00 0.00 0.00 5.36
3504 5117 0.329261 TGCTTGCTGTCTTATGGGCT 59.671 50.000 0.00 0.00 0.00 5.19
3510 5123 2.040278 TGCTGTCTTATGGGCTGTTTCT 59.960 45.455 0.00 0.00 0.00 2.52
3514 5127 4.264253 TGTCTTATGGGCTGTTTCTGATG 58.736 43.478 0.00 0.00 0.00 3.07
3516 5129 5.045942 TGTCTTATGGGCTGTTTCTGATGTA 60.046 40.000 0.00 0.00 0.00 2.29
3528 5141 7.625185 GCTGTTTCTGATGTATGAGGTTTTCTC 60.625 40.741 0.00 0.00 42.74 2.87
3530 5143 7.388776 TGTTTCTGATGTATGAGGTTTTCTCTG 59.611 37.037 0.00 0.00 42.86 3.35
3532 5145 4.517285 TGATGTATGAGGTTTTCTCTGGC 58.483 43.478 0.00 0.00 42.86 4.85
3533 5146 2.972625 TGTATGAGGTTTTCTCTGGCG 58.027 47.619 0.00 0.00 42.86 5.69
3534 5147 2.565391 TGTATGAGGTTTTCTCTGGCGA 59.435 45.455 0.00 0.00 42.86 5.54
3535 5148 2.393271 ATGAGGTTTTCTCTGGCGAG 57.607 50.000 0.00 0.00 42.86 5.03
3536 5149 1.048601 TGAGGTTTTCTCTGGCGAGT 58.951 50.000 0.00 0.00 42.86 4.18
3550 5165 8.631480 TCTCTGGCGAGTTTTATGTCTATATA 57.369 34.615 0.00 0.00 38.45 0.86
3551 5166 9.244292 TCTCTGGCGAGTTTTATGTCTATATAT 57.756 33.333 0.00 0.00 38.45 0.86
3552 5167 9.295214 CTCTGGCGAGTTTTATGTCTATATATG 57.705 37.037 0.00 0.00 32.47 1.78
3553 5168 8.803235 TCTGGCGAGTTTTATGTCTATATATGT 58.197 33.333 0.00 0.00 0.00 2.29
3554 5169 9.424319 CTGGCGAGTTTTATGTCTATATATGTT 57.576 33.333 0.00 0.00 0.00 2.71
3555 5170 9.419297 TGGCGAGTTTTATGTCTATATATGTTC 57.581 33.333 0.00 0.00 0.00 3.18
3556 5171 8.584600 GGCGAGTTTTATGTCTATATATGTTCG 58.415 37.037 0.00 0.00 0.00 3.95
3557 5172 8.102716 GCGAGTTTTATGTCTATATATGTTCGC 58.897 37.037 0.00 0.00 39.16 4.70
3558 5173 9.124807 CGAGTTTTATGTCTATATATGTTCGCA 57.875 33.333 0.00 0.00 0.00 5.10
3564 5179 9.573133 TTATGTCTATATATGTTCGCATGAGTG 57.427 33.333 0.00 0.00 38.47 3.51
3565 5180 7.214467 TGTCTATATATGTTCGCATGAGTGA 57.786 36.000 0.00 0.00 38.47 3.41
3566 5181 7.657336 TGTCTATATATGTTCGCATGAGTGAA 58.343 34.615 0.00 0.00 41.67 3.18
3567 5182 8.306761 TGTCTATATATGTTCGCATGAGTGAAT 58.693 33.333 0.00 0.00 45.16 2.57
3568 5183 8.802856 GTCTATATATGTTCGCATGAGTGAATC 58.197 37.037 0.00 0.00 45.16 2.52
3569 5184 8.743714 TCTATATATGTTCGCATGAGTGAATCT 58.256 33.333 0.00 0.00 45.16 2.40
3570 5185 9.363763 CTATATATGTTCGCATGAGTGAATCTT 57.636 33.333 0.00 0.00 45.16 2.40
3572 5187 9.881649 ATATATGTTCGCATGAGTGAATCTTAT 57.118 29.630 0.00 3.96 45.16 1.73
3573 5188 5.723492 TGTTCGCATGAGTGAATCTTATG 57.277 39.130 0.00 0.00 45.16 1.90
3592 5207 8.400184 TCTTATGCAATTATGAATTCTGAGGG 57.600 34.615 7.05 0.00 0.00 4.30
3593 5208 4.924305 TGCAATTATGAATTCTGAGGGC 57.076 40.909 7.05 4.58 0.00 5.19
3594 5209 4.539726 TGCAATTATGAATTCTGAGGGCT 58.460 39.130 7.05 0.00 0.00 5.19
3595 5210 4.340097 TGCAATTATGAATTCTGAGGGCTG 59.660 41.667 7.05 0.00 0.00 4.85
3596 5211 4.340381 GCAATTATGAATTCTGAGGGCTGT 59.660 41.667 7.05 0.00 0.00 4.40
3597 5212 5.735354 GCAATTATGAATTCTGAGGGCTGTG 60.735 44.000 7.05 0.00 0.00 3.66
3598 5213 4.842531 TTATGAATTCTGAGGGCTGTGA 57.157 40.909 7.05 0.00 0.00 3.58
3599 5214 3.947612 ATGAATTCTGAGGGCTGTGAT 57.052 42.857 7.05 0.00 0.00 3.06
3600 5215 3.726557 TGAATTCTGAGGGCTGTGATT 57.273 42.857 7.05 0.00 0.00 2.57
3601 5216 3.349927 TGAATTCTGAGGGCTGTGATTG 58.650 45.455 7.05 0.00 0.00 2.67
3602 5217 3.245016 TGAATTCTGAGGGCTGTGATTGT 60.245 43.478 7.05 0.00 0.00 2.71
3603 5218 2.479566 TTCTGAGGGCTGTGATTGTC 57.520 50.000 0.00 0.00 0.00 3.18
3604 5219 1.649321 TCTGAGGGCTGTGATTGTCT 58.351 50.000 0.00 0.00 0.00 3.41
3605 5220 1.980765 TCTGAGGGCTGTGATTGTCTT 59.019 47.619 0.00 0.00 0.00 3.01
3606 5221 2.373169 TCTGAGGGCTGTGATTGTCTTT 59.627 45.455 0.00 0.00 0.00 2.52
3607 5222 3.152341 CTGAGGGCTGTGATTGTCTTTT 58.848 45.455 0.00 0.00 0.00 2.27
3608 5223 3.565307 TGAGGGCTGTGATTGTCTTTTT 58.435 40.909 0.00 0.00 0.00 1.94
3609 5224 4.724399 TGAGGGCTGTGATTGTCTTTTTA 58.276 39.130 0.00 0.00 0.00 1.52
3610 5225 5.324409 TGAGGGCTGTGATTGTCTTTTTAT 58.676 37.500 0.00 0.00 0.00 1.40
3611 5226 5.183713 TGAGGGCTGTGATTGTCTTTTTATG 59.816 40.000 0.00 0.00 0.00 1.90
3612 5227 5.079643 AGGGCTGTGATTGTCTTTTTATGT 58.920 37.500 0.00 0.00 0.00 2.29
3613 5228 5.539955 AGGGCTGTGATTGTCTTTTTATGTT 59.460 36.000 0.00 0.00 0.00 2.71
3614 5229 5.634859 GGGCTGTGATTGTCTTTTTATGTTG 59.365 40.000 0.00 0.00 0.00 3.33
3615 5230 6.215845 GGCTGTGATTGTCTTTTTATGTTGT 58.784 36.000 0.00 0.00 0.00 3.32
3616 5231 6.701400 GGCTGTGATTGTCTTTTTATGTTGTT 59.299 34.615 0.00 0.00 0.00 2.83
3617 5232 7.306749 GGCTGTGATTGTCTTTTTATGTTGTTG 60.307 37.037 0.00 0.00 0.00 3.33
3618 5233 7.222611 GCTGTGATTGTCTTTTTATGTTGTTGT 59.777 33.333 0.00 0.00 0.00 3.32
3619 5234 8.994429 TGTGATTGTCTTTTTATGTTGTTGTT 57.006 26.923 0.00 0.00 0.00 2.83
3635 5250 9.787532 ATGTTGTTGTTACATATATGTTTCTGC 57.212 29.630 22.90 11.70 41.97 4.26
3636 5251 7.960195 TGTTGTTGTTACATATATGTTTCTGCG 59.040 33.333 22.90 0.00 41.97 5.18
3637 5252 7.603963 TGTTGTTACATATATGTTTCTGCGT 57.396 32.000 22.90 0.00 41.97 5.24
3638 5253 8.035165 TGTTGTTACATATATGTTTCTGCGTT 57.965 30.769 22.90 0.00 41.97 4.84
3639 5254 8.172484 TGTTGTTACATATATGTTTCTGCGTTC 58.828 33.333 22.90 6.81 41.97 3.95
3640 5255 8.388103 GTTGTTACATATATGTTTCTGCGTTCT 58.612 33.333 22.90 0.00 41.97 3.01
3641 5256 8.126871 TGTTACATATATGTTTCTGCGTTCTC 57.873 34.615 22.90 2.75 41.97 2.87
3642 5257 7.762159 TGTTACATATATGTTTCTGCGTTCTCA 59.238 33.333 22.90 0.00 41.97 3.27
3643 5258 8.765219 GTTACATATATGTTTCTGCGTTCTCAT 58.235 33.333 22.90 0.00 41.97 2.90
3644 5259 7.413475 ACATATATGTTTCTGCGTTCTCATC 57.587 36.000 12.75 0.00 37.90 2.92
3645 5260 6.986231 ACATATATGTTTCTGCGTTCTCATCA 59.014 34.615 12.75 0.00 37.90 3.07
3646 5261 7.495606 ACATATATGTTTCTGCGTTCTCATCAA 59.504 33.333 12.75 0.00 37.90 2.57
3647 5262 6.932356 ATATGTTTCTGCGTTCTCATCAAT 57.068 33.333 0.00 0.00 0.00 2.57
3648 5263 5.633830 ATGTTTCTGCGTTCTCATCAATT 57.366 34.783 0.00 0.00 0.00 2.32
3649 5264 5.034554 TGTTTCTGCGTTCTCATCAATTC 57.965 39.130 0.00 0.00 0.00 2.17
3650 5265 4.083324 TGTTTCTGCGTTCTCATCAATTCC 60.083 41.667 0.00 0.00 0.00 3.01
3651 5266 3.616956 TCTGCGTTCTCATCAATTCCT 57.383 42.857 0.00 0.00 0.00 3.36
3652 5267 3.942829 TCTGCGTTCTCATCAATTCCTT 58.057 40.909 0.00 0.00 0.00 3.36
3653 5268 4.326826 TCTGCGTTCTCATCAATTCCTTT 58.673 39.130 0.00 0.00 0.00 3.11
3654 5269 5.487433 TCTGCGTTCTCATCAATTCCTTTA 58.513 37.500 0.00 0.00 0.00 1.85
3655 5270 6.115446 TCTGCGTTCTCATCAATTCCTTTAT 58.885 36.000 0.00 0.00 0.00 1.40
3656 5271 6.258727 TCTGCGTTCTCATCAATTCCTTTATC 59.741 38.462 0.00 0.00 0.00 1.75
3657 5272 6.115446 TGCGTTCTCATCAATTCCTTTATCT 58.885 36.000 0.00 0.00 0.00 1.98
3658 5273 6.258727 TGCGTTCTCATCAATTCCTTTATCTC 59.741 38.462 0.00 0.00 0.00 2.75
3659 5274 6.293135 GCGTTCTCATCAATTCCTTTATCTCC 60.293 42.308 0.00 0.00 0.00 3.71
3660 5275 6.763135 CGTTCTCATCAATTCCTTTATCTCCA 59.237 38.462 0.00 0.00 0.00 3.86
3661 5276 7.254590 CGTTCTCATCAATTCCTTTATCTCCAC 60.255 40.741 0.00 0.00 0.00 4.02
3662 5277 6.595682 TCTCATCAATTCCTTTATCTCCACC 58.404 40.000 0.00 0.00 0.00 4.61
3663 5278 6.388100 TCTCATCAATTCCTTTATCTCCACCT 59.612 38.462 0.00 0.00 0.00 4.00
3664 5279 6.973642 TCATCAATTCCTTTATCTCCACCTT 58.026 36.000 0.00 0.00 0.00 3.50
3665 5280 6.830324 TCATCAATTCCTTTATCTCCACCTTG 59.170 38.462 0.00 0.00 0.00 3.61
3666 5281 6.139679 TCAATTCCTTTATCTCCACCTTGT 57.860 37.500 0.00 0.00 0.00 3.16
3667 5282 6.180472 TCAATTCCTTTATCTCCACCTTGTC 58.820 40.000 0.00 0.00 0.00 3.18
3668 5283 3.887621 TCCTTTATCTCCACCTTGTCG 57.112 47.619 0.00 0.00 0.00 4.35
3669 5284 2.093658 TCCTTTATCTCCACCTTGTCGC 60.094 50.000 0.00 0.00 0.00 5.19
3670 5285 2.093447 CCTTTATCTCCACCTTGTCGCT 60.093 50.000 0.00 0.00 0.00 4.93
3671 5286 2.672961 TTATCTCCACCTTGTCGCTG 57.327 50.000 0.00 0.00 0.00 5.18
3672 5287 1.557099 TATCTCCACCTTGTCGCTGT 58.443 50.000 0.00 0.00 0.00 4.40
3673 5288 1.557099 ATCTCCACCTTGTCGCTGTA 58.443 50.000 0.00 0.00 0.00 2.74
3674 5289 1.334160 TCTCCACCTTGTCGCTGTAA 58.666 50.000 0.00 0.00 0.00 2.41
3675 5290 1.689813 TCTCCACCTTGTCGCTGTAAA 59.310 47.619 0.00 0.00 0.00 2.01
3676 5291 1.798813 CTCCACCTTGTCGCTGTAAAC 59.201 52.381 0.00 0.00 0.00 2.01
3677 5292 0.511221 CCACCTTGTCGCTGTAAACG 59.489 55.000 0.00 0.00 0.00 3.60
3678 5293 1.493772 CACCTTGTCGCTGTAAACGA 58.506 50.000 0.00 0.00 37.17 3.85
3679 5294 2.066262 CACCTTGTCGCTGTAAACGAT 58.934 47.619 0.00 0.00 42.26 3.73
3680 5295 2.478894 CACCTTGTCGCTGTAAACGATT 59.521 45.455 0.00 0.00 42.26 3.34
3681 5296 3.059188 CACCTTGTCGCTGTAAACGATTT 60.059 43.478 0.00 0.00 42.26 2.17
3682 5297 3.059188 ACCTTGTCGCTGTAAACGATTTG 60.059 43.478 0.00 0.00 42.26 2.32
3683 5298 3.059188 CCTTGTCGCTGTAAACGATTTGT 60.059 43.478 0.00 0.00 42.26 2.83
3684 5299 4.523813 CTTGTCGCTGTAAACGATTTGTT 58.476 39.130 0.00 0.00 44.59 2.83
3685 5300 3.867665 TGTCGCTGTAAACGATTTGTTG 58.132 40.909 0.00 0.00 40.84 3.33
3686 5301 2.650297 GTCGCTGTAAACGATTTGTTGC 59.350 45.455 0.00 0.00 40.84 4.17
3687 5302 1.637086 CGCTGTAAACGATTTGTTGCG 59.363 47.619 5.23 5.23 40.84 4.85
3688 5303 2.660631 CGCTGTAAACGATTTGTTGCGA 60.661 45.455 11.71 0.00 46.27 5.10
3689 5304 3.488489 GCTGTAAACGATTTGTTGCGAT 58.512 40.909 0.00 0.00 40.84 4.58
3690 5305 3.538392 GCTGTAAACGATTTGTTGCGATC 59.462 43.478 0.00 0.00 40.84 3.69
3691 5306 4.669197 GCTGTAAACGATTTGTTGCGATCT 60.669 41.667 0.00 0.00 40.84 2.75
3692 5307 4.707563 TGTAAACGATTTGTTGCGATCTG 58.292 39.130 0.00 0.00 40.84 2.90
3693 5308 2.900122 AACGATTTGTTGCGATCTGG 57.100 45.000 0.00 0.00 40.00 3.86
3694 5309 1.808411 ACGATTTGTTGCGATCTGGT 58.192 45.000 0.00 0.00 0.00 4.00
3695 5310 1.732259 ACGATTTGTTGCGATCTGGTC 59.268 47.619 0.00 0.00 0.00 4.02
3696 5311 1.731709 CGATTTGTTGCGATCTGGTCA 59.268 47.619 0.00 0.00 0.00 4.02
3697 5312 2.159430 CGATTTGTTGCGATCTGGTCAA 59.841 45.455 0.00 0.00 0.00 3.18
3698 5313 3.181507 CGATTTGTTGCGATCTGGTCAAT 60.182 43.478 0.00 0.00 0.00 2.57
3699 5314 4.033932 CGATTTGTTGCGATCTGGTCAATA 59.966 41.667 0.00 0.00 0.00 1.90
3700 5315 5.277490 CGATTTGTTGCGATCTGGTCAATAT 60.277 40.000 0.00 0.00 0.00 1.28
3701 5316 4.880886 TTGTTGCGATCTGGTCAATATG 57.119 40.909 0.00 0.00 0.00 1.78
3702 5317 3.205338 TGTTGCGATCTGGTCAATATGG 58.795 45.455 0.00 0.00 0.00 2.74
3703 5318 3.118445 TGTTGCGATCTGGTCAATATGGA 60.118 43.478 0.00 0.00 0.00 3.41
3704 5319 3.391506 TGCGATCTGGTCAATATGGAG 57.608 47.619 0.00 0.00 0.00 3.86
3705 5320 2.037641 TGCGATCTGGTCAATATGGAGG 59.962 50.000 0.00 0.00 0.00 4.30
3706 5321 2.613977 GCGATCTGGTCAATATGGAGGG 60.614 54.545 0.00 0.00 0.00 4.30
3707 5322 2.613977 CGATCTGGTCAATATGGAGGGC 60.614 54.545 0.00 0.00 0.00 5.19
3708 5323 1.140312 TCTGGTCAATATGGAGGGCC 58.860 55.000 0.00 0.00 0.00 5.80
3732 5347 1.511850 GCTGGTGCAAAATTCAACCC 58.488 50.000 0.00 0.00 39.41 4.11
3733 5348 1.877680 GCTGGTGCAAAATTCAACCCC 60.878 52.381 0.00 0.00 39.41 4.95
3734 5349 1.693606 CTGGTGCAAAATTCAACCCCT 59.306 47.619 0.00 0.00 0.00 4.79
3735 5350 2.104622 CTGGTGCAAAATTCAACCCCTT 59.895 45.455 0.00 0.00 0.00 3.95
3736 5351 3.309296 TGGTGCAAAATTCAACCCCTTA 58.691 40.909 0.00 0.00 0.00 2.69
3737 5352 3.711704 TGGTGCAAAATTCAACCCCTTAA 59.288 39.130 0.00 0.00 0.00 1.85
3738 5353 4.202305 TGGTGCAAAATTCAACCCCTTAAG 60.202 41.667 0.00 0.00 0.00 1.85
3739 5354 4.314961 GTGCAAAATTCAACCCCTTAAGG 58.685 43.478 15.14 15.14 0.00 2.69
3740 5355 3.970640 TGCAAAATTCAACCCCTTAAGGT 59.029 39.130 20.22 0.16 44.00 3.50
3747 5362 2.877150 ACCCCTTAAGGTTCAGGCA 58.123 52.632 20.22 0.00 36.44 4.75
3748 5363 1.154430 ACCCCTTAAGGTTCAGGCAA 58.846 50.000 20.22 0.00 36.44 4.52
3749 5364 1.501604 ACCCCTTAAGGTTCAGGCAAA 59.498 47.619 20.22 0.00 36.44 3.68
3750 5365 1.893137 CCCCTTAAGGTTCAGGCAAAC 59.107 52.381 20.22 0.00 0.00 2.93
3755 5370 3.836151 GGTTCAGGCAAACCGTGT 58.164 55.556 6.12 0.00 39.40 4.49
3756 5371 1.652563 GGTTCAGGCAAACCGTGTC 59.347 57.895 6.12 0.00 39.40 3.67
3757 5372 1.652563 GTTCAGGCAAACCGTGTCC 59.347 57.895 0.00 0.00 42.76 4.02
3758 5373 1.098712 GTTCAGGCAAACCGTGTCCA 61.099 55.000 0.00 0.00 42.76 4.02
3759 5374 0.394488 TTCAGGCAAACCGTGTCCAA 60.394 50.000 0.00 0.00 42.76 3.53
3760 5375 0.817634 TCAGGCAAACCGTGTCCAAG 60.818 55.000 0.00 0.00 42.76 3.61
3761 5376 1.101049 CAGGCAAACCGTGTCCAAGT 61.101 55.000 0.00 0.00 42.76 3.16
3762 5377 0.470766 AGGCAAACCGTGTCCAAGTA 59.529 50.000 0.00 0.00 42.76 2.24
3763 5378 1.134037 AGGCAAACCGTGTCCAAGTAA 60.134 47.619 0.00 0.00 42.76 2.24
3764 5379 1.677052 GGCAAACCGTGTCCAAGTAAA 59.323 47.619 0.00 0.00 0.00 2.01
3765 5380 2.287368 GGCAAACCGTGTCCAAGTAAAG 60.287 50.000 0.00 0.00 0.00 1.85
3766 5381 2.356695 GCAAACCGTGTCCAAGTAAAGT 59.643 45.455 0.00 0.00 0.00 2.66
3767 5382 3.560896 GCAAACCGTGTCCAAGTAAAGTA 59.439 43.478 0.00 0.00 0.00 2.24
3768 5383 4.035441 GCAAACCGTGTCCAAGTAAAGTAA 59.965 41.667 0.00 0.00 0.00 2.24
3769 5384 5.448904 GCAAACCGTGTCCAAGTAAAGTAAA 60.449 40.000 0.00 0.00 0.00 2.01
3770 5385 6.553524 CAAACCGTGTCCAAGTAAAGTAAAA 58.446 36.000 0.00 0.00 0.00 1.52
3771 5386 6.756299 AACCGTGTCCAAGTAAAGTAAAAA 57.244 33.333 0.00 0.00 0.00 1.94
3824 5439 6.369059 CTTCTCATGAAGTGTGACAAAACT 57.631 37.500 0.00 0.00 43.38 2.66
3825 5440 7.482654 CTTCTCATGAAGTGTGACAAAACTA 57.517 36.000 0.00 0.00 43.38 2.24
3826 5441 6.844696 TCTCATGAAGTGTGACAAAACTAC 57.155 37.500 0.00 0.00 0.00 2.73
3827 5442 6.345298 TCTCATGAAGTGTGACAAAACTACA 58.655 36.000 0.00 0.00 0.00 2.74
3828 5443 6.992123 TCTCATGAAGTGTGACAAAACTACAT 59.008 34.615 0.00 0.00 0.00 2.29
3829 5444 7.171508 TCTCATGAAGTGTGACAAAACTACATC 59.828 37.037 0.00 0.00 0.00 3.06
3830 5445 6.765512 TCATGAAGTGTGACAAAACTACATCA 59.234 34.615 0.00 0.00 0.00 3.07
3831 5446 6.993786 TGAAGTGTGACAAAACTACATCAA 57.006 33.333 0.00 0.00 0.00 2.57
3832 5447 6.781138 TGAAGTGTGACAAAACTACATCAAC 58.219 36.000 0.00 0.00 0.00 3.18
3833 5448 6.372937 TGAAGTGTGACAAAACTACATCAACA 59.627 34.615 0.00 0.00 0.00 3.33
3834 5449 6.119144 AGTGTGACAAAACTACATCAACAC 57.881 37.500 0.00 0.00 0.00 3.32
3835 5450 5.645929 AGTGTGACAAAACTACATCAACACA 59.354 36.000 0.00 0.00 34.24 3.72
3836 5451 6.318648 AGTGTGACAAAACTACATCAACACAT 59.681 34.615 0.00 0.00 37.87 3.21
3837 5452 6.414694 GTGTGACAAAACTACATCAACACATG 59.585 38.462 0.00 0.00 37.87 3.21
3838 5453 5.914635 GTGACAAAACTACATCAACACATGG 59.085 40.000 0.00 0.00 0.00 3.66
3839 5454 5.825151 TGACAAAACTACATCAACACATGGA 59.175 36.000 0.00 0.00 0.00 3.41
3840 5455 6.017192 TGACAAAACTACATCAACACATGGAG 60.017 38.462 0.00 0.00 40.26 3.86
3841 5456 6.061441 ACAAAACTACATCAACACATGGAGA 58.939 36.000 0.00 0.00 36.91 3.71
3842 5457 6.716628 ACAAAACTACATCAACACATGGAGAT 59.283 34.615 0.00 0.00 36.91 2.75
3843 5458 7.882791 ACAAAACTACATCAACACATGGAGATA 59.117 33.333 0.00 0.00 36.91 1.98
3844 5459 8.896744 CAAAACTACATCAACACATGGAGATAT 58.103 33.333 0.00 0.00 36.91 1.63
3845 5460 8.668510 AAACTACATCAACACATGGAGATATC 57.331 34.615 0.00 0.00 36.91 1.63
3846 5461 7.365497 ACTACATCAACACATGGAGATATCA 57.635 36.000 5.32 0.00 36.91 2.15
3847 5462 7.795047 ACTACATCAACACATGGAGATATCAA 58.205 34.615 5.32 0.00 36.91 2.57
3848 5463 8.435187 ACTACATCAACACATGGAGATATCAAT 58.565 33.333 5.32 0.00 36.91 2.57
3849 5464 7.741027 ACATCAACACATGGAGATATCAATC 57.259 36.000 5.32 0.00 0.00 2.67
3850 5465 7.284820 ACATCAACACATGGAGATATCAATCA 58.715 34.615 5.32 0.50 34.28 2.57
3851 5466 7.444487 ACATCAACACATGGAGATATCAATCAG 59.556 37.037 5.32 0.00 34.28 2.90
3852 5467 6.892485 TCAACACATGGAGATATCAATCAGT 58.108 36.000 5.32 0.00 34.28 3.41
3853 5468 6.988580 TCAACACATGGAGATATCAATCAGTC 59.011 38.462 5.32 0.00 34.28 3.51
3854 5469 5.536260 ACACATGGAGATATCAATCAGTCG 58.464 41.667 5.32 0.00 34.28 4.18
3855 5470 5.302823 ACACATGGAGATATCAATCAGTCGA 59.697 40.000 5.32 0.00 34.28 4.20
3856 5471 5.862860 CACATGGAGATATCAATCAGTCGAG 59.137 44.000 5.32 0.00 34.28 4.04
3857 5472 4.511617 TGGAGATATCAATCAGTCGAGC 57.488 45.455 5.32 0.00 34.28 5.03
3858 5473 3.891366 TGGAGATATCAATCAGTCGAGCA 59.109 43.478 5.32 0.00 34.28 4.26
3859 5474 4.342092 TGGAGATATCAATCAGTCGAGCAA 59.658 41.667 5.32 0.00 34.28 3.91
3860 5475 5.011431 TGGAGATATCAATCAGTCGAGCAAT 59.989 40.000 5.32 0.00 34.28 3.56
3861 5476 5.348179 GGAGATATCAATCAGTCGAGCAATG 59.652 44.000 5.32 0.00 34.28 2.82
3862 5477 6.094193 AGATATCAATCAGTCGAGCAATGA 57.906 37.500 5.32 0.00 34.28 2.57
3863 5478 6.157904 AGATATCAATCAGTCGAGCAATGAG 58.842 40.000 5.32 0.00 34.28 2.90
3864 5479 3.599730 TCAATCAGTCGAGCAATGAGT 57.400 42.857 0.00 0.00 0.00 3.41
3865 5480 3.256558 TCAATCAGTCGAGCAATGAGTG 58.743 45.455 9.67 9.67 39.66 3.51
3866 5481 9.399599 GATATCAATCAGTCGAGCAATGAGTGC 62.400 44.444 0.00 0.00 41.74 4.40
3881 5496 7.884816 CAATGAGTGCTTTTCATCATCTTTT 57.115 32.000 0.00 0.00 34.30 2.27
3882 5497 8.306680 CAATGAGTGCTTTTCATCATCTTTTT 57.693 30.769 0.00 0.00 34.30 1.94
3945 5560 6.612247 TTTTGAGACAATCGTTTTAGCAGA 57.388 33.333 0.00 0.00 0.00 4.26
3946 5561 6.612247 TTTGAGACAATCGTTTTAGCAGAA 57.388 33.333 0.00 0.00 0.00 3.02
3947 5562 5.591643 TGAGACAATCGTTTTAGCAGAAC 57.408 39.130 0.00 0.00 0.00 3.01
3948 5563 5.297547 TGAGACAATCGTTTTAGCAGAACT 58.702 37.500 0.00 0.00 0.00 3.01
3949 5564 5.177511 TGAGACAATCGTTTTAGCAGAACTG 59.822 40.000 0.00 0.00 0.00 3.16
3950 5565 5.297547 AGACAATCGTTTTAGCAGAACTGA 58.702 37.500 5.97 0.00 0.00 3.41
3951 5566 5.934625 AGACAATCGTTTTAGCAGAACTGAT 59.065 36.000 5.97 1.66 0.00 2.90
3952 5567 6.091441 AGACAATCGTTTTAGCAGAACTGATC 59.909 38.462 5.97 0.00 0.00 2.92
3953 5568 5.700832 ACAATCGTTTTAGCAGAACTGATCA 59.299 36.000 5.97 0.00 0.00 2.92
3954 5569 6.128445 ACAATCGTTTTAGCAGAACTGATCAG 60.128 38.462 21.37 21.37 0.00 2.90
3955 5570 4.245660 TCGTTTTAGCAGAACTGATCAGG 58.754 43.478 26.08 9.79 0.00 3.86
3956 5571 3.181516 CGTTTTAGCAGAACTGATCAGGC 60.182 47.826 26.08 18.72 0.00 4.85
3957 5572 2.299993 TTAGCAGAACTGATCAGGCG 57.700 50.000 26.08 12.20 36.19 5.52
3958 5573 1.474330 TAGCAGAACTGATCAGGCGA 58.526 50.000 26.08 13.12 36.19 5.54
3959 5574 0.175302 AGCAGAACTGATCAGGCGAG 59.825 55.000 26.08 14.04 36.19 5.03
3960 5575 0.174389 GCAGAACTGATCAGGCGAGA 59.826 55.000 26.08 0.00 0.00 4.04
3961 5576 1.404717 GCAGAACTGATCAGGCGAGAA 60.405 52.381 26.08 0.00 0.00 2.87
3962 5577 2.741228 GCAGAACTGATCAGGCGAGAAT 60.741 50.000 26.08 0.53 0.00 2.40
3963 5578 3.491619 GCAGAACTGATCAGGCGAGAATA 60.492 47.826 26.08 0.00 0.00 1.75
3964 5579 4.798924 GCAGAACTGATCAGGCGAGAATAT 60.799 45.833 26.08 0.00 0.00 1.28
3965 5580 4.922692 CAGAACTGATCAGGCGAGAATATC 59.077 45.833 26.08 9.76 0.00 1.63
3966 5581 3.951775 ACTGATCAGGCGAGAATATCC 57.048 47.619 26.08 0.00 0.00 2.59
3967 5582 3.234353 ACTGATCAGGCGAGAATATCCA 58.766 45.455 26.08 0.00 0.00 3.41
3968 5583 3.257873 ACTGATCAGGCGAGAATATCCAG 59.742 47.826 26.08 0.00 0.00 3.86
3969 5584 3.234353 TGATCAGGCGAGAATATCCAGT 58.766 45.455 0.00 0.00 0.00 4.00
3970 5585 3.643320 TGATCAGGCGAGAATATCCAGTT 59.357 43.478 0.00 0.00 0.00 3.16
3971 5586 4.101585 TGATCAGGCGAGAATATCCAGTTT 59.898 41.667 0.00 0.00 0.00 2.66
3972 5587 4.487714 TCAGGCGAGAATATCCAGTTTT 57.512 40.909 0.00 0.00 0.00 2.43
3973 5588 4.843728 TCAGGCGAGAATATCCAGTTTTT 58.156 39.130 0.00 0.00 0.00 1.94
3974 5589 4.635765 TCAGGCGAGAATATCCAGTTTTTG 59.364 41.667 0.00 0.00 0.00 2.44
3975 5590 4.396166 CAGGCGAGAATATCCAGTTTTTGT 59.604 41.667 0.00 0.00 0.00 2.83
3976 5591 5.010282 AGGCGAGAATATCCAGTTTTTGTT 58.990 37.500 0.00 0.00 0.00 2.83
3977 5592 5.476945 AGGCGAGAATATCCAGTTTTTGTTT 59.523 36.000 0.00 0.00 0.00 2.83
3978 5593 6.657541 AGGCGAGAATATCCAGTTTTTGTTTA 59.342 34.615 0.00 0.00 0.00 2.01
3979 5594 7.175990 AGGCGAGAATATCCAGTTTTTGTTTAA 59.824 33.333 0.00 0.00 0.00 1.52
3980 5595 7.810759 GGCGAGAATATCCAGTTTTTGTTTAAA 59.189 33.333 0.00 0.00 0.00 1.52
3981 5596 9.187455 GCGAGAATATCCAGTTTTTGTTTAAAA 57.813 29.630 0.00 0.00 34.13 1.52
3989 5604 8.541133 TCCAGTTTTTGTTTAAAAAGGTGAAG 57.459 30.769 0.00 0.00 44.07 3.02
3990 5605 8.368668 TCCAGTTTTTGTTTAAAAAGGTGAAGA 58.631 29.630 0.00 0.00 44.07 2.87
3991 5606 8.655970 CCAGTTTTTGTTTAAAAAGGTGAAGAG 58.344 33.333 0.00 0.00 44.07 2.85
3992 5607 9.418045 CAGTTTTTGTTTAAAAAGGTGAAGAGA 57.582 29.630 0.00 0.00 44.07 3.10
3993 5608 9.990360 AGTTTTTGTTTAAAAAGGTGAAGAGAA 57.010 25.926 0.00 0.00 44.07 2.87
3999 5614 9.621629 TGTTTAAAAAGGTGAAGAGAATACTCA 57.378 29.630 0.00 0.00 44.79 3.41
4081 5696 5.581126 GAGTGTCAGAAGACTCATCATCT 57.419 43.478 6.11 0.00 43.53 2.90
4082 5697 5.964758 GAGTGTCAGAAGACTCATCATCTT 58.035 41.667 6.11 0.00 43.53 2.40
4083 5698 6.357579 AGTGTCAGAAGACTCATCATCTTT 57.642 37.500 0.00 0.00 45.20 2.52
4084 5699 6.164876 AGTGTCAGAAGACTCATCATCTTTG 58.835 40.000 0.00 0.00 45.20 2.77
4085 5700 5.931146 GTGTCAGAAGACTCATCATCTTTGT 59.069 40.000 0.00 0.00 45.20 2.83
4086 5701 7.039434 AGTGTCAGAAGACTCATCATCTTTGTA 60.039 37.037 0.00 0.00 45.20 2.41
4087 5702 7.062839 GTGTCAGAAGACTCATCATCTTTGTAC 59.937 40.741 0.00 0.00 45.20 2.90
4088 5703 6.252441 GTCAGAAGACTCATCATCTTTGTACG 59.748 42.308 0.00 0.00 41.64 3.67
4089 5704 6.071896 TCAGAAGACTCATCATCTTTGTACGT 60.072 38.462 0.00 0.00 36.53 3.57
4090 5705 6.034363 CAGAAGACTCATCATCTTTGTACGTG 59.966 42.308 0.00 0.00 36.53 4.49
4091 5706 5.644977 AGACTCATCATCTTTGTACGTGA 57.355 39.130 0.00 0.00 0.00 4.35
4092 5707 5.645624 AGACTCATCATCTTTGTACGTGAG 58.354 41.667 0.00 0.00 38.01 3.51
4093 5708 4.177026 ACTCATCATCTTTGTACGTGAGC 58.823 43.478 0.00 0.00 36.08 4.26
4094 5709 3.179048 TCATCATCTTTGTACGTGAGCG 58.821 45.455 0.00 0.00 44.93 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 4.394078 TCTTGACCGGCGTCGACG 62.394 66.667 32.57 32.57 42.37 5.12
266 267 2.430610 GGCCTCGTGCTCCTCATCT 61.431 63.158 0.00 0.00 40.92 2.90
314 315 4.367023 TGCACCTACACGACGGCC 62.367 66.667 0.00 0.00 0.00 6.13
324 325 3.019003 GCGCTTCTCCCTGCACCTA 62.019 63.158 0.00 0.00 0.00 3.08
573 894 3.851128 GTCCGCCTAGCCCCACTC 61.851 72.222 0.00 0.00 0.00 3.51
718 1045 2.736192 GCAGCTCTGTTCTGAACTTCTC 59.264 50.000 20.18 8.28 33.54 2.87
723 1050 0.319900 TCGGCAGCTCTGTTCTGAAC 60.320 55.000 13.49 13.49 33.54 3.18
725 1052 1.290324 GTCGGCAGCTCTGTTCTGA 59.710 57.895 0.00 0.00 33.54 3.27
726 1053 1.739562 GGTCGGCAGCTCTGTTCTG 60.740 63.158 0.00 0.00 34.79 3.02
727 1054 2.659610 GGTCGGCAGCTCTGTTCT 59.340 61.111 0.00 0.00 0.00 3.01
728 1055 2.435059 GGGTCGGCAGCTCTGTTC 60.435 66.667 0.00 0.00 0.00 3.18
731 1058 4.803426 GACGGGTCGGCAGCTCTG 62.803 72.222 0.00 0.00 33.63 3.35
738 1065 1.300233 GATGAGATGACGGGTCGGC 60.300 63.158 0.00 0.00 34.27 5.54
739 1066 1.109920 AGGATGAGATGACGGGTCGG 61.110 60.000 0.00 0.00 0.00 4.79
740 1067 1.605753 TAGGATGAGATGACGGGTCG 58.394 55.000 0.00 0.00 0.00 4.79
741 1068 2.894126 ACATAGGATGAGATGACGGGTC 59.106 50.000 0.00 0.00 0.00 4.46
742 1069 2.630098 CACATAGGATGAGATGACGGGT 59.370 50.000 0.00 0.00 0.00 5.28
743 1070 2.893489 TCACATAGGATGAGATGACGGG 59.107 50.000 0.00 0.00 0.00 5.28
744 1071 3.613671 GCTCACATAGGATGAGATGACGG 60.614 52.174 6.19 0.00 45.46 4.79
745 1072 3.005155 TGCTCACATAGGATGAGATGACG 59.995 47.826 6.19 0.00 45.46 4.35
757 1084 1.002888 CCTAGGCCCATGCTCACATAG 59.997 57.143 0.00 0.00 37.74 2.23
767 1132 0.620700 AAACCGACTCCTAGGCCCAT 60.621 55.000 2.96 0.00 0.00 4.00
939 1304 4.400776 CGTCGTCGTCGTCGTCGT 62.401 66.667 18.87 0.00 45.27 4.34
941 1306 2.534264 TTAGCGTCGTCGTCGTCGTC 62.534 60.000 19.72 13.26 46.29 4.20
942 1307 2.657757 TTAGCGTCGTCGTCGTCGT 61.658 57.895 19.72 11.07 46.29 4.34
943 1308 2.094539 TTAGCGTCGTCGTCGTCG 59.905 61.111 15.68 15.68 46.99 5.12
944 1309 1.860853 GGTTAGCGTCGTCGTCGTC 60.861 63.158 13.09 6.07 39.49 4.20
945 1310 2.174349 GGTTAGCGTCGTCGTCGT 59.826 61.111 13.09 3.57 39.49 4.34
1116 1487 0.798776 CGTGAGCCGCAGAGAAAAAT 59.201 50.000 0.00 0.00 0.00 1.82
1157 1528 6.526910 ACCTAATCGGTGGTGATCATCACG 62.527 50.000 28.26 23.07 46.80 4.35
1179 1550 1.379527 GAATGGATTGGGTCGGACAC 58.620 55.000 10.76 7.01 0.00 3.67
1265 1636 1.602605 AGCAGCAGCAGCATGACAA 60.603 52.632 12.92 0.00 45.49 3.18
1343 2868 6.159293 TGTGTTCATCATCACAGAGAACTAC 58.841 40.000 0.00 0.00 39.23 2.73
1364 2889 3.500558 ACATCAGACTCGTCATCTGTG 57.499 47.619 11.30 11.01 43.47 3.66
1430 2956 3.658757 TGGCTAAGCAAACAATGTTCC 57.341 42.857 0.00 0.00 0.00 3.62
1458 2984 5.343307 AAAAACAGTGGAGAAAATGTGCT 57.657 34.783 0.00 0.00 0.00 4.40
1492 3018 2.202919 CTCATCATGCCGGCGACA 60.203 61.111 23.90 1.91 0.00 4.35
1498 3024 2.042686 TTTCCTTCCTCATCATGCCG 57.957 50.000 0.00 0.00 0.00 5.69
1542 3075 8.350722 TGACATTTAGTATGAGTAGGACGATTC 58.649 37.037 0.00 0.00 0.00 2.52
1547 3081 7.222224 CCGTTTGACATTTAGTATGAGTAGGAC 59.778 40.741 0.00 0.00 0.00 3.85
1558 3092 5.177725 GGTTTGACCGTTTGACATTTAGT 57.822 39.130 0.00 0.00 0.00 2.24
1593 3127 3.971032 ACACAACTAGTTCAGCAAAGC 57.029 42.857 4.77 0.00 0.00 3.51
1619 3155 7.415653 GGCAAAGAGGAAACAACTATTCTATGG 60.416 40.741 0.00 0.00 0.00 2.74
1697 3233 6.653526 TCATCACATGGTTTTCAGAAACAT 57.346 33.333 0.00 0.00 45.52 2.71
1824 3360 9.315525 GAAACCTAGAGCAGTACTAAATTAAGG 57.684 37.037 0.00 1.55 0.00 2.69
1925 3461 4.818546 ACGAGCTATCCATTTCATCTTTGG 59.181 41.667 0.00 0.00 0.00 3.28
1934 3470 2.165641 TGACACGACGAGCTATCCATTT 59.834 45.455 0.00 0.00 0.00 2.32
2219 3764 8.943002 CGTGGTAAGAAAGAAGTAATTAATGGT 58.057 33.333 0.00 0.00 0.00 3.55
2321 3870 1.070604 CATGCCATCATAGGACCCCT 58.929 55.000 0.00 0.00 37.71 4.79
2345 3894 6.962182 TCACAAGGATAATCAGGTCTCAAAT 58.038 36.000 0.00 0.00 0.00 2.32
2512 4063 8.710835 AAACTAATGTTAAAACAGGGTTTGTG 57.289 30.769 15.83 3.49 43.04 3.33
2616 4167 4.065088 TGTATTGAGTGACCTTGTGAAGC 58.935 43.478 0.00 0.00 0.00 3.86
2838 4428 4.503741 TTGCACAACTGGCTTTAATCTC 57.496 40.909 0.00 0.00 0.00 2.75
2862 4454 7.212274 CCTGAAGAAAAAGGTCACAAAATCAT 58.788 34.615 0.00 0.00 0.00 2.45
2864 4456 5.463392 GCCTGAAGAAAAAGGTCACAAAATC 59.537 40.000 0.00 0.00 35.86 2.17
2974 4566 5.240183 ACAAATGTTCAGTCAGTTCATCAGG 59.760 40.000 0.00 0.00 0.00 3.86
2975 4567 6.309712 ACAAATGTTCAGTCAGTTCATCAG 57.690 37.500 0.00 0.00 0.00 2.90
2977 4569 7.701924 TGAAAACAAATGTTCAGTCAGTTCATC 59.298 33.333 0.00 0.00 37.25 2.92
2978 4570 7.546358 TGAAAACAAATGTTCAGTCAGTTCAT 58.454 30.769 0.00 0.00 37.25 2.57
2983 4575 6.979817 TGGAATGAAAACAAATGTTCAGTCAG 59.020 34.615 14.12 0.00 45.82 3.51
2984 4576 6.871844 TGGAATGAAAACAAATGTTCAGTCA 58.128 32.000 14.12 11.43 45.82 3.41
2985 4577 7.951530 ATGGAATGAAAACAAATGTTCAGTC 57.048 32.000 0.00 3.59 44.22 3.51
2997 4589 4.512571 AGCAAAGCACAATGGAATGAAAAC 59.487 37.500 0.00 0.00 0.00 2.43
3003 4596 2.895404 ACTGAGCAAAGCACAATGGAAT 59.105 40.909 0.00 0.00 0.00 3.01
3047 4647 2.523015 GATCTCAAAATGCTTGCACCG 58.477 47.619 0.00 0.00 0.00 4.94
3094 4694 5.810074 GGTGAAAGCAATCTAGAAGAGAGAC 59.190 44.000 0.00 0.00 37.70 3.36
3165 4765 9.474920 GGTCAATTCAACTCATAACATCAAAAA 57.525 29.630 0.00 0.00 0.00 1.94
3188 4788 5.871396 TGGATACATTAGAAGGTCTGGTC 57.129 43.478 0.00 0.00 46.17 4.02
3240 4840 3.855689 AAGATCATTTTGCCAAGTCGG 57.144 42.857 0.00 0.00 38.11 4.79
3265 4867 4.956075 TCAGATTAAAAGGGGATTCAAGCC 59.044 41.667 0.00 0.00 0.00 4.35
3276 4878 2.424956 GGCAGCACCTCAGATTAAAAGG 59.575 50.000 0.00 0.00 36.21 3.11
3287 4889 1.089920 CAACAGTATGGCAGCACCTC 58.910 55.000 0.00 0.00 43.62 3.85
3291 4893 2.086094 CATGTCAACAGTATGGCAGCA 58.914 47.619 0.00 0.00 43.62 4.41
3292 4894 2.358957 TCATGTCAACAGTATGGCAGC 58.641 47.619 0.00 0.00 43.62 5.25
3293 4895 4.397103 ACATTCATGTCAACAGTATGGCAG 59.603 41.667 0.00 0.00 38.50 4.85
3308 4910 0.448990 CGGTGCACAGGACATTCATG 59.551 55.000 20.43 0.00 33.86 3.07
3312 4914 1.167851 CAATCGGTGCACAGGACATT 58.832 50.000 20.43 7.83 0.00 2.71
3330 4932 3.625764 GCAGCGAAGGTCAAATTATACCA 59.374 43.478 10.79 0.00 38.30 3.25
3373 4976 8.972127 GCCTAGATAAGTTATCATATCTGTCCA 58.028 37.037 22.00 0.00 38.84 4.02
3391 4996 5.454755 GCATTTTACCAGTCCTGCCTAGATA 60.455 44.000 0.00 0.00 0.00 1.98
3392 4997 4.687219 GCATTTTACCAGTCCTGCCTAGAT 60.687 45.833 0.00 0.00 0.00 1.98
3395 5000 2.356741 GGCATTTTACCAGTCCTGCCTA 60.357 50.000 4.19 0.00 44.47 3.93
3406 5011 4.076394 TGTCCACACTTAGGCATTTTACC 58.924 43.478 0.00 0.00 0.00 2.85
3408 5013 4.759693 CACTGTCCACACTTAGGCATTTTA 59.240 41.667 0.00 0.00 0.00 1.52
3414 5019 1.070134 TGACACTGTCCACACTTAGGC 59.930 52.381 6.72 0.00 0.00 3.93
3416 5021 3.068165 TCACTGACACTGTCCACACTTAG 59.932 47.826 6.72 0.00 0.00 2.18
3417 5022 3.028130 TCACTGACACTGTCCACACTTA 58.972 45.455 6.72 0.00 0.00 2.24
3418 5023 1.831106 TCACTGACACTGTCCACACTT 59.169 47.619 6.72 0.00 0.00 3.16
3443 5048 3.881220 TCCCTCGGGATTAATCACAAAC 58.119 45.455 17.68 0.00 39.76 2.93
3458 5063 4.100189 ACCTCACTTAGATTCATTCCCTCG 59.900 45.833 0.00 0.00 0.00 4.63
3472 5077 3.515502 ACAGCAAGCATAGACCTCACTTA 59.484 43.478 0.00 0.00 0.00 2.24
3473 5078 2.304180 ACAGCAAGCATAGACCTCACTT 59.696 45.455 0.00 0.00 0.00 3.16
3475 5080 2.093764 AGACAGCAAGCATAGACCTCAC 60.094 50.000 0.00 0.00 0.00 3.51
3476 5081 2.182827 AGACAGCAAGCATAGACCTCA 58.817 47.619 0.00 0.00 0.00 3.86
3478 5083 4.444022 CCATAAGACAGCAAGCATAGACCT 60.444 45.833 0.00 0.00 0.00 3.85
3480 5085 3.812053 CCCATAAGACAGCAAGCATAGAC 59.188 47.826 0.00 0.00 0.00 2.59
3481 5086 3.745480 GCCCATAAGACAGCAAGCATAGA 60.745 47.826 0.00 0.00 0.00 1.98
3482 5087 2.551459 GCCCATAAGACAGCAAGCATAG 59.449 50.000 0.00 0.00 0.00 2.23
3497 5110 5.455183 CCTCATACATCAGAAACAGCCCATA 60.455 44.000 0.00 0.00 0.00 2.74
3498 5111 4.458397 CTCATACATCAGAAACAGCCCAT 58.542 43.478 0.00 0.00 0.00 4.00
3499 5112 3.370846 CCTCATACATCAGAAACAGCCCA 60.371 47.826 0.00 0.00 0.00 5.36
3500 5113 3.209410 CCTCATACATCAGAAACAGCCC 58.791 50.000 0.00 0.00 0.00 5.19
3501 5114 3.878778 ACCTCATACATCAGAAACAGCC 58.121 45.455 0.00 0.00 0.00 4.85
3502 5115 5.886960 AAACCTCATACATCAGAAACAGC 57.113 39.130 0.00 0.00 0.00 4.40
3503 5116 7.605691 AGAGAAAACCTCATACATCAGAAACAG 59.394 37.037 0.00 0.00 44.40 3.16
3504 5117 7.388776 CAGAGAAAACCTCATACATCAGAAACA 59.611 37.037 0.00 0.00 44.40 2.83
3510 5123 4.517285 GCCAGAGAAAACCTCATACATCA 58.483 43.478 0.00 0.00 44.40 3.07
3514 5127 3.247006 TCGCCAGAGAAAACCTCATAC 57.753 47.619 0.00 0.00 44.40 2.39
3528 5141 8.988064 ACATATATAGACATAAAACTCGCCAG 57.012 34.615 0.00 0.00 0.00 4.85
3530 5143 8.584600 CGAACATATATAGACATAAAACTCGCC 58.415 37.037 0.00 0.00 0.00 5.54
3532 5145 9.124807 TGCGAACATATATAGACATAAAACTCG 57.875 33.333 0.00 0.00 0.00 4.18
3550 5165 5.277683 GCATAAGATTCACTCATGCGAACAT 60.278 40.000 0.00 0.00 36.79 2.71
3551 5166 4.034394 GCATAAGATTCACTCATGCGAACA 59.966 41.667 0.00 0.00 33.40 3.18
3552 5167 4.034394 TGCATAAGATTCACTCATGCGAAC 59.966 41.667 0.00 0.00 43.84 3.95
3553 5168 4.190772 TGCATAAGATTCACTCATGCGAA 58.809 39.130 0.00 0.00 43.84 4.70
3554 5169 3.795877 TGCATAAGATTCACTCATGCGA 58.204 40.909 0.00 0.00 43.84 5.10
3555 5170 4.541085 TTGCATAAGATTCACTCATGCG 57.459 40.909 0.00 0.00 43.84 4.73
3556 5171 8.294577 TCATAATTGCATAAGATTCACTCATGC 58.705 33.333 0.00 0.00 41.81 4.06
3566 5181 9.021807 CCCTCAGAATTCATAATTGCATAAGAT 57.978 33.333 8.44 0.00 0.00 2.40
3567 5182 7.040201 GCCCTCAGAATTCATAATTGCATAAGA 60.040 37.037 8.44 0.00 0.00 2.10
3568 5183 7.039923 AGCCCTCAGAATTCATAATTGCATAAG 60.040 37.037 8.44 0.00 0.00 1.73
3569 5184 6.779049 AGCCCTCAGAATTCATAATTGCATAA 59.221 34.615 8.44 0.00 0.00 1.90
3570 5185 6.208007 CAGCCCTCAGAATTCATAATTGCATA 59.792 38.462 8.44 0.00 0.00 3.14
3571 5186 5.010719 CAGCCCTCAGAATTCATAATTGCAT 59.989 40.000 8.44 0.00 0.00 3.96
3572 5187 4.340097 CAGCCCTCAGAATTCATAATTGCA 59.660 41.667 8.44 0.00 0.00 4.08
3573 5188 4.340381 ACAGCCCTCAGAATTCATAATTGC 59.660 41.667 8.44 3.23 0.00 3.56
3574 5189 5.591472 TCACAGCCCTCAGAATTCATAATTG 59.409 40.000 8.44 0.00 0.00 2.32
3575 5190 5.759059 TCACAGCCCTCAGAATTCATAATT 58.241 37.500 8.44 0.00 0.00 1.40
3576 5191 5.378230 TCACAGCCCTCAGAATTCATAAT 57.622 39.130 8.44 0.00 0.00 1.28
3577 5192 4.842531 TCACAGCCCTCAGAATTCATAA 57.157 40.909 8.44 0.00 0.00 1.90
3578 5193 5.128205 CAATCACAGCCCTCAGAATTCATA 58.872 41.667 8.44 0.00 0.00 2.15
3579 5194 3.947612 ATCACAGCCCTCAGAATTCAT 57.052 42.857 8.44 0.00 0.00 2.57
3580 5195 3.245016 ACAATCACAGCCCTCAGAATTCA 60.245 43.478 8.44 0.00 0.00 2.57
3581 5196 3.350833 ACAATCACAGCCCTCAGAATTC 58.649 45.455 0.00 0.00 0.00 2.17
3582 5197 3.009916 AGACAATCACAGCCCTCAGAATT 59.990 43.478 0.00 0.00 0.00 2.17
3583 5198 2.575279 AGACAATCACAGCCCTCAGAAT 59.425 45.455 0.00 0.00 0.00 2.40
3584 5199 1.980765 AGACAATCACAGCCCTCAGAA 59.019 47.619 0.00 0.00 0.00 3.02
3585 5200 1.649321 AGACAATCACAGCCCTCAGA 58.351 50.000 0.00 0.00 0.00 3.27
3586 5201 2.486472 AAGACAATCACAGCCCTCAG 57.514 50.000 0.00 0.00 0.00 3.35
3587 5202 2.957402 AAAGACAATCACAGCCCTCA 57.043 45.000 0.00 0.00 0.00 3.86
3588 5203 5.183904 ACATAAAAAGACAATCACAGCCCTC 59.816 40.000 0.00 0.00 0.00 4.30
3589 5204 5.079643 ACATAAAAAGACAATCACAGCCCT 58.920 37.500 0.00 0.00 0.00 5.19
3590 5205 5.391312 ACATAAAAAGACAATCACAGCCC 57.609 39.130 0.00 0.00 0.00 5.19
3591 5206 6.215845 ACAACATAAAAAGACAATCACAGCC 58.784 36.000 0.00 0.00 0.00 4.85
3592 5207 7.222611 ACAACAACATAAAAAGACAATCACAGC 59.777 33.333 0.00 0.00 0.00 4.40
3593 5208 8.633075 ACAACAACATAAAAAGACAATCACAG 57.367 30.769 0.00 0.00 0.00 3.66
3594 5209 8.994429 AACAACAACATAAAAAGACAATCACA 57.006 26.923 0.00 0.00 0.00 3.58
3609 5224 9.787532 GCAGAAACATATATGTAACAACAACAT 57.212 29.630 18.56 0.00 40.80 2.71
3610 5225 7.960195 CGCAGAAACATATATGTAACAACAACA 59.040 33.333 18.56 0.00 40.80 3.33
3611 5226 7.960738 ACGCAGAAACATATATGTAACAACAAC 59.039 33.333 18.56 3.94 40.80 3.32
3612 5227 8.035165 ACGCAGAAACATATATGTAACAACAA 57.965 30.769 18.56 0.00 40.80 2.83
3613 5228 7.603963 ACGCAGAAACATATATGTAACAACA 57.396 32.000 18.56 0.00 40.80 3.33
3614 5229 8.388103 AGAACGCAGAAACATATATGTAACAAC 58.612 33.333 18.56 8.11 40.80 3.32
3615 5230 8.487313 AGAACGCAGAAACATATATGTAACAA 57.513 30.769 18.56 0.00 40.80 2.83
3616 5231 7.762159 TGAGAACGCAGAAACATATATGTAACA 59.238 33.333 18.56 3.81 40.80 2.41
3617 5232 8.126871 TGAGAACGCAGAAACATATATGTAAC 57.873 34.615 18.56 14.55 40.80 2.50
3618 5233 8.887036 ATGAGAACGCAGAAACATATATGTAA 57.113 30.769 18.56 0.00 40.80 2.41
3619 5234 8.141268 TGATGAGAACGCAGAAACATATATGTA 58.859 33.333 18.56 0.00 40.80 2.29
3620 5235 6.986231 TGATGAGAACGCAGAAACATATATGT 59.014 34.615 12.75 12.75 44.20 2.29
3621 5236 7.412137 TGATGAGAACGCAGAAACATATATG 57.588 36.000 11.29 11.29 0.00 1.78
3622 5237 8.613060 ATTGATGAGAACGCAGAAACATATAT 57.387 30.769 0.00 0.00 0.00 0.86
3623 5238 8.437360 AATTGATGAGAACGCAGAAACATATA 57.563 30.769 0.00 0.00 0.00 0.86
3624 5239 6.932356 ATTGATGAGAACGCAGAAACATAT 57.068 33.333 0.00 0.00 0.00 1.78
3625 5240 6.183360 GGAATTGATGAGAACGCAGAAACATA 60.183 38.462 0.00 0.00 0.00 2.29
3626 5241 5.392380 GGAATTGATGAGAACGCAGAAACAT 60.392 40.000 0.00 0.00 0.00 2.71
3627 5242 4.083324 GGAATTGATGAGAACGCAGAAACA 60.083 41.667 0.00 0.00 0.00 2.83
3628 5243 4.154918 AGGAATTGATGAGAACGCAGAAAC 59.845 41.667 0.00 0.00 0.00 2.78
3629 5244 4.326826 AGGAATTGATGAGAACGCAGAAA 58.673 39.130 0.00 0.00 0.00 2.52
3630 5245 3.942829 AGGAATTGATGAGAACGCAGAA 58.057 40.909 0.00 0.00 0.00 3.02
3631 5246 3.616956 AGGAATTGATGAGAACGCAGA 57.383 42.857 0.00 0.00 0.00 4.26
3632 5247 4.691860 AAAGGAATTGATGAGAACGCAG 57.308 40.909 0.00 0.00 0.00 5.18
3633 5248 6.115446 AGATAAAGGAATTGATGAGAACGCA 58.885 36.000 0.00 0.00 0.00 5.24
3634 5249 6.293135 GGAGATAAAGGAATTGATGAGAACGC 60.293 42.308 0.00 0.00 0.00 4.84
3635 5250 6.763135 TGGAGATAAAGGAATTGATGAGAACG 59.237 38.462 0.00 0.00 0.00 3.95
3636 5251 7.012799 GGTGGAGATAAAGGAATTGATGAGAAC 59.987 40.741 0.00 0.00 0.00 3.01
3637 5252 7.056635 GGTGGAGATAAAGGAATTGATGAGAA 58.943 38.462 0.00 0.00 0.00 2.87
3638 5253 6.388100 AGGTGGAGATAAAGGAATTGATGAGA 59.612 38.462 0.00 0.00 0.00 3.27
3639 5254 6.599445 AGGTGGAGATAAAGGAATTGATGAG 58.401 40.000 0.00 0.00 0.00 2.90
3640 5255 6.581388 AGGTGGAGATAAAGGAATTGATGA 57.419 37.500 0.00 0.00 0.00 2.92
3641 5256 6.604795 ACAAGGTGGAGATAAAGGAATTGATG 59.395 38.462 0.00 0.00 0.00 3.07
3642 5257 6.735556 ACAAGGTGGAGATAAAGGAATTGAT 58.264 36.000 0.00 0.00 0.00 2.57
3643 5258 6.139679 ACAAGGTGGAGATAAAGGAATTGA 57.860 37.500 0.00 0.00 0.00 2.57
3644 5259 5.065218 CGACAAGGTGGAGATAAAGGAATTG 59.935 44.000 0.00 0.00 0.00 2.32
3645 5260 5.186198 CGACAAGGTGGAGATAAAGGAATT 58.814 41.667 0.00 0.00 0.00 2.17
3646 5261 4.770795 CGACAAGGTGGAGATAAAGGAAT 58.229 43.478 0.00 0.00 0.00 3.01
3647 5262 3.618997 GCGACAAGGTGGAGATAAAGGAA 60.619 47.826 0.00 0.00 0.00 3.36
3648 5263 2.093658 GCGACAAGGTGGAGATAAAGGA 60.094 50.000 0.00 0.00 0.00 3.36
3649 5264 2.093447 AGCGACAAGGTGGAGATAAAGG 60.093 50.000 0.00 0.00 0.00 3.11
3650 5265 2.932614 CAGCGACAAGGTGGAGATAAAG 59.067 50.000 0.00 0.00 44.14 1.85
3651 5266 2.972625 CAGCGACAAGGTGGAGATAAA 58.027 47.619 0.00 0.00 44.14 1.40
3652 5267 2.672961 CAGCGACAAGGTGGAGATAA 57.327 50.000 0.00 0.00 44.14 1.75
3659 5274 8.842213 AACAAATCGTTTACAGCGACAAGGTG 62.842 42.308 0.00 0.00 44.11 4.00
3660 5275 2.450609 ATCGTTTACAGCGACAAGGT 57.549 45.000 0.00 0.00 41.33 3.50
3661 5276 3.059188 ACAAATCGTTTACAGCGACAAGG 60.059 43.478 0.00 0.00 41.33 3.61
3662 5277 4.128554 ACAAATCGTTTACAGCGACAAG 57.871 40.909 0.00 0.00 41.33 3.16
3663 5278 4.275662 CAACAAATCGTTTACAGCGACAA 58.724 39.130 0.00 0.00 41.33 3.18
3664 5279 3.846744 GCAACAAATCGTTTACAGCGACA 60.847 43.478 0.00 0.00 41.33 4.35
3665 5280 2.650297 GCAACAAATCGTTTACAGCGAC 59.350 45.455 0.00 0.00 41.33 5.19
3666 5281 2.660631 CGCAACAAATCGTTTACAGCGA 60.661 45.455 0.00 0.00 44.57 4.93
3667 5282 1.637086 CGCAACAAATCGTTTACAGCG 59.363 47.619 0.00 0.00 39.11 5.18
3668 5283 2.911120 TCGCAACAAATCGTTTACAGC 58.089 42.857 0.00 0.00 34.86 4.40
3669 5284 4.783036 CAGATCGCAACAAATCGTTTACAG 59.217 41.667 0.00 0.00 34.86 2.74
3670 5285 4.377943 CCAGATCGCAACAAATCGTTTACA 60.378 41.667 0.00 0.00 34.86 2.41
3671 5286 4.088648 CCAGATCGCAACAAATCGTTTAC 58.911 43.478 0.00 0.00 34.86 2.01
3672 5287 3.749088 ACCAGATCGCAACAAATCGTTTA 59.251 39.130 0.00 0.00 34.86 2.01
3673 5288 2.552315 ACCAGATCGCAACAAATCGTTT 59.448 40.909 0.00 0.00 34.86 3.60
3674 5289 2.151202 ACCAGATCGCAACAAATCGTT 58.849 42.857 0.00 0.00 38.83 3.85
3675 5290 1.732259 GACCAGATCGCAACAAATCGT 59.268 47.619 0.00 0.00 0.00 3.73
3676 5291 1.731709 TGACCAGATCGCAACAAATCG 59.268 47.619 0.00 0.00 0.00 3.34
3677 5292 3.829886 TTGACCAGATCGCAACAAATC 57.170 42.857 0.00 0.00 0.00 2.17
3678 5293 5.221106 CCATATTGACCAGATCGCAACAAAT 60.221 40.000 0.00 0.00 0.00 2.32
3679 5294 4.096231 CCATATTGACCAGATCGCAACAAA 59.904 41.667 0.00 0.00 0.00 2.83
3680 5295 3.627123 CCATATTGACCAGATCGCAACAA 59.373 43.478 0.00 0.00 0.00 2.83
3681 5296 3.118445 TCCATATTGACCAGATCGCAACA 60.118 43.478 0.00 0.00 0.00 3.33
3682 5297 3.466836 TCCATATTGACCAGATCGCAAC 58.533 45.455 0.00 0.00 0.00 4.17
3683 5298 3.494924 CCTCCATATTGACCAGATCGCAA 60.495 47.826 0.00 0.00 0.00 4.85
3684 5299 2.037641 CCTCCATATTGACCAGATCGCA 59.962 50.000 0.00 0.00 0.00 5.10
3685 5300 2.613977 CCCTCCATATTGACCAGATCGC 60.614 54.545 0.00 0.00 0.00 4.58
3686 5301 2.613977 GCCCTCCATATTGACCAGATCG 60.614 54.545 0.00 0.00 0.00 3.69
3687 5302 2.290577 GGCCCTCCATATTGACCAGATC 60.291 54.545 0.00 0.00 0.00 2.75
3688 5303 1.707427 GGCCCTCCATATTGACCAGAT 59.293 52.381 0.00 0.00 0.00 2.90
3689 5304 1.140312 GGCCCTCCATATTGACCAGA 58.860 55.000 0.00 0.00 0.00 3.86
3690 5305 0.846015 TGGCCCTCCATATTGACCAG 59.154 55.000 0.00 0.00 37.47 4.00
3691 5306 3.035305 TGGCCCTCCATATTGACCA 57.965 52.632 0.00 0.00 37.47 4.02
3713 5328 1.511850 GGGTTGAATTTTGCACCAGC 58.488 50.000 0.00 0.00 42.57 4.85
3714 5329 1.693606 AGGGGTTGAATTTTGCACCAG 59.306 47.619 0.00 0.00 0.00 4.00
3715 5330 1.799933 AGGGGTTGAATTTTGCACCA 58.200 45.000 0.00 0.00 0.00 4.17
3716 5331 2.928801 AAGGGGTTGAATTTTGCACC 57.071 45.000 0.00 0.00 0.00 5.01
3717 5332 4.202315 ACCTTAAGGGGTTGAATTTTGCAC 60.202 41.667 25.31 0.00 40.27 4.57
3718 5333 3.970640 ACCTTAAGGGGTTGAATTTTGCA 59.029 39.130 25.31 0.00 40.27 4.08
3719 5334 4.617253 ACCTTAAGGGGTTGAATTTTGC 57.383 40.909 25.31 0.00 40.27 3.68
3729 5344 1.154430 TTGCCTGAACCTTAAGGGGT 58.846 50.000 25.31 12.84 42.05 4.95
3730 5345 1.893137 GTTTGCCTGAACCTTAAGGGG 59.107 52.381 25.31 16.92 40.27 4.79
3731 5346 1.893137 GGTTTGCCTGAACCTTAAGGG 59.107 52.381 25.31 8.32 44.55 3.95
3732 5347 1.539827 CGGTTTGCCTGAACCTTAAGG 59.460 52.381 20.42 20.42 45.53 2.69
3733 5348 2.031157 CACGGTTTGCCTGAACCTTAAG 60.031 50.000 10.75 0.00 45.53 1.85
3734 5349 1.950909 CACGGTTTGCCTGAACCTTAA 59.049 47.619 10.75 0.00 45.53 1.85
3735 5350 1.134037 ACACGGTTTGCCTGAACCTTA 60.134 47.619 10.75 0.00 45.53 2.69
3736 5351 0.395173 ACACGGTTTGCCTGAACCTT 60.395 50.000 10.75 0.87 45.53 3.50
3737 5352 0.818040 GACACGGTTTGCCTGAACCT 60.818 55.000 10.75 0.00 45.53 3.50
3738 5353 1.652563 GACACGGTTTGCCTGAACC 59.347 57.895 4.20 4.20 44.51 3.62
3739 5354 1.098712 TGGACACGGTTTGCCTGAAC 61.099 55.000 0.00 0.00 0.00 3.18
3740 5355 0.394488 TTGGACACGGTTTGCCTGAA 60.394 50.000 0.00 0.00 0.00 3.02
3741 5356 0.817634 CTTGGACACGGTTTGCCTGA 60.818 55.000 0.00 0.00 0.00 3.86
3742 5357 1.101049 ACTTGGACACGGTTTGCCTG 61.101 55.000 0.00 0.00 0.00 4.85
3743 5358 0.470766 TACTTGGACACGGTTTGCCT 59.529 50.000 0.00 0.00 0.00 4.75
3744 5359 1.310904 TTACTTGGACACGGTTTGCC 58.689 50.000 0.00 0.00 0.00 4.52
3745 5360 2.356695 ACTTTACTTGGACACGGTTTGC 59.643 45.455 0.00 0.00 0.00 3.68
3746 5361 5.738118 TTACTTTACTTGGACACGGTTTG 57.262 39.130 0.00 0.00 0.00 2.93
3747 5362 6.756299 TTTTACTTTACTTGGACACGGTTT 57.244 33.333 0.00 0.00 0.00 3.27
3748 5363 6.756299 TTTTTACTTTACTTGGACACGGTT 57.244 33.333 0.00 0.00 0.00 4.44
3802 5417 6.821160 TGTAGTTTTGTCACACTTCATGAGAA 59.179 34.615 0.00 0.00 28.89 2.87
3803 5418 6.345298 TGTAGTTTTGTCACACTTCATGAGA 58.655 36.000 0.00 0.00 0.00 3.27
3804 5419 6.603237 TGTAGTTTTGTCACACTTCATGAG 57.397 37.500 0.00 0.00 0.00 2.90
3805 5420 6.765512 TGATGTAGTTTTGTCACACTTCATGA 59.234 34.615 7.74 0.00 32.82 3.07
3806 5421 6.958255 TGATGTAGTTTTGTCACACTTCATG 58.042 36.000 7.74 0.00 32.82 3.07
3807 5422 7.066887 TGTTGATGTAGTTTTGTCACACTTCAT 59.933 33.333 4.11 4.11 34.69 2.57
3808 5423 6.372937 TGTTGATGTAGTTTTGTCACACTTCA 59.627 34.615 0.00 0.00 0.00 3.02
3809 5424 6.687105 GTGTTGATGTAGTTTTGTCACACTTC 59.313 38.462 0.00 0.00 0.00 3.01
3810 5425 6.150307 TGTGTTGATGTAGTTTTGTCACACTT 59.850 34.615 0.00 0.00 0.00 3.16
3811 5426 5.645929 TGTGTTGATGTAGTTTTGTCACACT 59.354 36.000 0.00 0.00 0.00 3.55
3812 5427 5.874831 TGTGTTGATGTAGTTTTGTCACAC 58.125 37.500 0.00 0.00 0.00 3.82
3813 5428 6.459435 CCATGTGTTGATGTAGTTTTGTCACA 60.459 38.462 0.00 0.00 37.61 3.58
3814 5429 5.914635 CCATGTGTTGATGTAGTTTTGTCAC 59.085 40.000 0.00 0.00 0.00 3.67
3815 5430 5.825151 TCCATGTGTTGATGTAGTTTTGTCA 59.175 36.000 0.00 0.00 0.00 3.58
3816 5431 6.204688 TCTCCATGTGTTGATGTAGTTTTGTC 59.795 38.462 0.00 0.00 0.00 3.18
3817 5432 6.061441 TCTCCATGTGTTGATGTAGTTTTGT 58.939 36.000 0.00 0.00 0.00 2.83
3818 5433 6.558771 TCTCCATGTGTTGATGTAGTTTTG 57.441 37.500 0.00 0.00 0.00 2.44
3819 5434 9.113838 GATATCTCCATGTGTTGATGTAGTTTT 57.886 33.333 0.00 0.00 0.00 2.43
3820 5435 8.267183 TGATATCTCCATGTGTTGATGTAGTTT 58.733 33.333 3.98 0.00 0.00 2.66
3821 5436 7.795047 TGATATCTCCATGTGTTGATGTAGTT 58.205 34.615 3.98 0.00 0.00 2.24
3822 5437 7.365497 TGATATCTCCATGTGTTGATGTAGT 57.635 36.000 3.98 0.00 0.00 2.73
3823 5438 8.843885 ATTGATATCTCCATGTGTTGATGTAG 57.156 34.615 3.98 0.00 0.00 2.74
3824 5439 8.431222 TGATTGATATCTCCATGTGTTGATGTA 58.569 33.333 3.98 0.00 0.00 2.29
3825 5440 7.284820 TGATTGATATCTCCATGTGTTGATGT 58.715 34.615 3.98 0.00 0.00 3.06
3826 5441 7.444487 ACTGATTGATATCTCCATGTGTTGATG 59.556 37.037 3.98 0.00 0.00 3.07
3827 5442 7.515586 ACTGATTGATATCTCCATGTGTTGAT 58.484 34.615 3.98 0.00 0.00 2.57
3828 5443 6.892485 ACTGATTGATATCTCCATGTGTTGA 58.108 36.000 3.98 0.00 0.00 3.18
3829 5444 6.073927 CGACTGATTGATATCTCCATGTGTTG 60.074 42.308 3.98 0.00 0.00 3.33
3830 5445 5.987953 CGACTGATTGATATCTCCATGTGTT 59.012 40.000 3.98 0.00 0.00 3.32
3831 5446 5.302823 TCGACTGATTGATATCTCCATGTGT 59.697 40.000 3.98 0.00 0.00 3.72
3832 5447 5.776744 TCGACTGATTGATATCTCCATGTG 58.223 41.667 3.98 0.00 0.00 3.21
3833 5448 5.566429 GCTCGACTGATTGATATCTCCATGT 60.566 44.000 3.98 0.00 0.00 3.21
3834 5449 4.863689 GCTCGACTGATTGATATCTCCATG 59.136 45.833 3.98 0.00 0.00 3.66
3835 5450 4.525874 TGCTCGACTGATTGATATCTCCAT 59.474 41.667 3.98 0.00 0.00 3.41
3836 5451 3.891366 TGCTCGACTGATTGATATCTCCA 59.109 43.478 3.98 0.00 0.00 3.86
3837 5452 4.511617 TGCTCGACTGATTGATATCTCC 57.488 45.455 3.98 0.00 0.00 3.71
3838 5453 6.155136 TCATTGCTCGACTGATTGATATCTC 58.845 40.000 3.98 0.00 0.00 2.75
3839 5454 6.094193 TCATTGCTCGACTGATTGATATCT 57.906 37.500 3.98 0.00 0.00 1.98
3840 5455 5.925397 ACTCATTGCTCGACTGATTGATATC 59.075 40.000 0.00 0.00 0.00 1.63
3841 5456 5.695363 CACTCATTGCTCGACTGATTGATAT 59.305 40.000 0.00 0.00 0.00 1.63
3842 5457 5.045872 CACTCATTGCTCGACTGATTGATA 58.954 41.667 0.00 0.00 0.00 2.15
3843 5458 3.869832 CACTCATTGCTCGACTGATTGAT 59.130 43.478 0.00 0.00 0.00 2.57
3844 5459 3.256558 CACTCATTGCTCGACTGATTGA 58.743 45.455 0.00 0.00 0.00 2.57
3845 5460 3.653256 CACTCATTGCTCGACTGATTG 57.347 47.619 0.00 0.00 0.00 2.67
3857 5472 7.884816 AAAAGATGATGAAAAGCACTCATTG 57.115 32.000 0.00 0.00 33.63 2.82
3921 5536 7.022055 TCTGCTAAAACGATTGTCTCAAAAA 57.978 32.000 0.00 0.00 0.00 1.94
3922 5537 6.612247 TCTGCTAAAACGATTGTCTCAAAA 57.388 33.333 0.00 0.00 0.00 2.44
3923 5538 6.260050 AGTTCTGCTAAAACGATTGTCTCAAA 59.740 34.615 0.00 0.00 0.00 2.69
3924 5539 5.758296 AGTTCTGCTAAAACGATTGTCTCAA 59.242 36.000 0.00 0.00 0.00 3.02
3925 5540 5.177511 CAGTTCTGCTAAAACGATTGTCTCA 59.822 40.000 0.00 0.00 0.00 3.27
3926 5541 5.405571 TCAGTTCTGCTAAAACGATTGTCTC 59.594 40.000 0.00 0.00 0.00 3.36
3927 5542 5.297547 TCAGTTCTGCTAAAACGATTGTCT 58.702 37.500 0.00 0.00 0.00 3.41
3928 5543 5.591643 TCAGTTCTGCTAAAACGATTGTC 57.408 39.130 0.00 0.00 0.00 3.18
3929 5544 5.700832 TGATCAGTTCTGCTAAAACGATTGT 59.299 36.000 0.00 0.00 0.00 2.71
3930 5545 6.169419 TGATCAGTTCTGCTAAAACGATTG 57.831 37.500 0.00 0.00 0.00 2.67
3931 5546 5.352569 CCTGATCAGTTCTGCTAAAACGATT 59.647 40.000 21.11 0.00 0.00 3.34
3932 5547 4.872691 CCTGATCAGTTCTGCTAAAACGAT 59.127 41.667 21.11 0.00 0.00 3.73
3933 5548 4.245660 CCTGATCAGTTCTGCTAAAACGA 58.754 43.478 21.11 0.00 0.00 3.85
3934 5549 3.181516 GCCTGATCAGTTCTGCTAAAACG 60.182 47.826 21.11 2.49 0.00 3.60
3935 5550 3.181516 CGCCTGATCAGTTCTGCTAAAAC 60.182 47.826 21.11 0.00 0.00 2.43
3936 5551 3.002791 CGCCTGATCAGTTCTGCTAAAA 58.997 45.455 21.11 0.00 0.00 1.52
3937 5552 2.233676 TCGCCTGATCAGTTCTGCTAAA 59.766 45.455 21.11 3.69 0.00 1.85
3938 5553 1.824852 TCGCCTGATCAGTTCTGCTAA 59.175 47.619 21.11 5.90 0.00 3.09
3939 5554 1.406898 CTCGCCTGATCAGTTCTGCTA 59.593 52.381 21.11 8.55 0.00 3.49
3940 5555 0.175302 CTCGCCTGATCAGTTCTGCT 59.825 55.000 21.11 0.00 0.00 4.24
3941 5556 0.174389 TCTCGCCTGATCAGTTCTGC 59.826 55.000 21.11 15.44 0.00 4.26
3942 5557 2.662006 TTCTCGCCTGATCAGTTCTG 57.338 50.000 21.11 7.13 0.00 3.02
3943 5558 4.021544 GGATATTCTCGCCTGATCAGTTCT 60.022 45.833 21.11 1.90 0.00 3.01
3944 5559 4.241681 GGATATTCTCGCCTGATCAGTTC 58.758 47.826 21.11 11.38 0.00 3.01
3945 5560 3.643320 TGGATATTCTCGCCTGATCAGTT 59.357 43.478 21.11 0.45 0.00 3.16
3946 5561 3.234353 TGGATATTCTCGCCTGATCAGT 58.766 45.455 21.11 3.57 0.00 3.41
3947 5562 3.257873 ACTGGATATTCTCGCCTGATCAG 59.742 47.826 16.24 16.24 0.00 2.90
3948 5563 3.234353 ACTGGATATTCTCGCCTGATCA 58.766 45.455 0.00 0.00 0.00 2.92
3949 5564 3.951775 ACTGGATATTCTCGCCTGATC 57.048 47.619 0.00 0.00 0.00 2.92
3950 5565 4.696479 AAACTGGATATTCTCGCCTGAT 57.304 40.909 0.00 0.00 0.00 2.90
3951 5566 4.487714 AAAACTGGATATTCTCGCCTGA 57.512 40.909 0.00 0.00 0.00 3.86
3952 5567 4.396166 ACAAAAACTGGATATTCTCGCCTG 59.604 41.667 0.00 0.00 0.00 4.85
3953 5568 4.589908 ACAAAAACTGGATATTCTCGCCT 58.410 39.130 0.00 0.00 0.00 5.52
3954 5569 4.965119 ACAAAAACTGGATATTCTCGCC 57.035 40.909 0.00 0.00 0.00 5.54
3955 5570 8.736751 TTTAAACAAAAACTGGATATTCTCGC 57.263 30.769 0.00 0.00 0.00 5.03
3963 5578 9.161629 CTTCACCTTTTTAAACAAAAACTGGAT 57.838 29.630 7.48 0.00 36.79 3.41
3964 5579 8.368668 TCTTCACCTTTTTAAACAAAAACTGGA 58.631 29.630 7.48 0.00 36.79 3.86
3965 5580 8.541133 TCTTCACCTTTTTAAACAAAAACTGG 57.459 30.769 0.00 0.00 36.79 4.00
3966 5581 9.418045 TCTCTTCACCTTTTTAAACAAAAACTG 57.582 29.630 0.00 0.00 36.79 3.16
3967 5582 9.990360 TTCTCTTCACCTTTTTAAACAAAAACT 57.010 25.926 0.00 0.00 36.79 2.66
3973 5588 9.621629 TGAGTATTCTCTTCACCTTTTTAAACA 57.378 29.630 0.77 0.00 40.98 2.83
4059 5674 5.581126 AGATGATGAGTCTTCTGACACTC 57.419 43.478 7.48 8.41 45.20 3.51
4060 5675 5.999205 AAGATGATGAGTCTTCTGACACT 57.001 39.130 7.48 0.00 45.20 3.55
4061 5676 5.931146 ACAAAGATGATGAGTCTTCTGACAC 59.069 40.000 7.48 0.00 45.20 3.67
4062 5677 6.106648 ACAAAGATGATGAGTCTTCTGACA 57.893 37.500 7.48 0.00 45.20 3.58
4063 5678 6.252441 CGTACAAAGATGATGAGTCTTCTGAC 59.748 42.308 7.48 0.00 38.47 3.51
4064 5679 6.071896 ACGTACAAAGATGATGAGTCTTCTGA 60.072 38.462 7.48 0.00 38.47 3.27
4065 5680 6.034363 CACGTACAAAGATGATGAGTCTTCTG 59.966 42.308 7.48 0.33 38.47 3.02
4066 5681 6.071896 TCACGTACAAAGATGATGAGTCTTCT 60.072 38.462 7.48 0.00 39.71 2.85
4067 5682 6.093404 TCACGTACAAAGATGATGAGTCTTC 58.907 40.000 0.00 0.00 34.97 2.87
4068 5683 6.025749 TCACGTACAAAGATGATGAGTCTT 57.974 37.500 0.00 0.00 37.52 3.01
4069 5684 5.644977 TCACGTACAAAGATGATGAGTCT 57.355 39.130 0.00 0.00 0.00 3.24
4070 5685 4.266502 GCTCACGTACAAAGATGATGAGTC 59.733 45.833 0.00 0.00 35.58 3.36
4071 5686 4.177026 GCTCACGTACAAAGATGATGAGT 58.823 43.478 0.00 0.00 35.58 3.41
4072 5687 3.241553 CGCTCACGTACAAAGATGATGAG 59.758 47.826 0.00 0.00 36.11 2.90
4073 5688 3.179048 CGCTCACGTACAAAGATGATGA 58.821 45.455 0.00 0.00 33.53 2.92
4074 5689 3.559530 CGCTCACGTACAAAGATGATG 57.440 47.619 0.00 0.00 33.53 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.