Multiple sequence alignment - TraesCS5D01G423000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G423000 chr5D 100.000 3044 0 0 1 3044 482853005 482856048 0.000000e+00 5622
1 TraesCS5D01G423000 chr5D 82.812 256 39 4 261 514 482833813 482834065 1.100000e-54 224
2 TraesCS5D01G423000 chr5D 96.471 85 1 2 2735 2818 482855700 482855783 4.090000e-29 139
3 TraesCS5D01G423000 chr5D 96.471 85 1 2 2696 2779 482855739 482855822 4.090000e-29 139
4 TraesCS5D01G423000 chr5D 100.000 61 0 0 102 162 482853057 482853117 2.480000e-21 113
5 TraesCS5D01G423000 chr5D 100.000 61 0 0 53 113 482853106 482853166 2.480000e-21 113
6 TraesCS5D01G423000 chr5B 91.672 1681 79 25 860 2498 592791669 592793330 0.000000e+00 2272
7 TraesCS5D01G423000 chr5B 80.588 340 52 9 261 594 592787496 592787827 1.810000e-62 250
8 TraesCS5D01G423000 chr5B 94.326 141 8 0 2599 2739 592794501 592794641 1.840000e-52 217
9 TraesCS5D01G423000 chr5B 94.355 124 5 2 2774 2896 592794598 592794720 4.010000e-44 189
10 TraesCS5D01G423000 chr5A 90.969 1207 71 13 616 1788 602488661 602489863 0.000000e+00 1591
11 TraesCS5D01G423000 chr5A 91.540 591 32 11 1832 2406 602489878 602490466 0.000000e+00 798
12 TraesCS5D01G423000 chr5A 96.169 261 9 1 2465 2725 602490747 602491006 2.810000e-115 425
13 TraesCS5D01G423000 chr5A 85.714 126 6 5 2774 2896 602490978 602491094 4.120000e-24 122
14 TraesCS5D01G423000 chr6B 82.832 565 74 11 1049 1612 135942217 135942759 4.560000e-133 484
15 TraesCS5D01G423000 chr6D 82.955 528 65 10 1087 1612 62229627 62230131 1.290000e-123 453
16 TraesCS5D01G423000 chr6A 82.008 528 71 14 1049 1574 79404548 79405053 7.800000e-116 427
17 TraesCS5D01G423000 chr2D 79.602 402 58 12 1219 1611 616923698 616923312 1.800000e-67 267
18 TraesCS5D01G423000 chr2B 78.164 403 62 14 1219 1611 752395561 752395175 1.820000e-57 233


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G423000 chr5D 482853005 482856048 3043 False 1225.2 5622 98.58840 1 3044 5 chr5D.!!$F2 3043
1 TraesCS5D01G423000 chr5B 592787496 592794720 7224 False 732.0 2272 90.23525 261 2896 4 chr5B.!!$F1 2635
2 TraesCS5D01G423000 chr5A 602488661 602491094 2433 False 734.0 1591 91.09800 616 2896 4 chr5A.!!$F1 2280
3 TraesCS5D01G423000 chr6B 135942217 135942759 542 False 484.0 484 82.83200 1049 1612 1 chr6B.!!$F1 563
4 TraesCS5D01G423000 chr6D 62229627 62230131 504 False 453.0 453 82.95500 1087 1612 1 chr6D.!!$F1 525
5 TraesCS5D01G423000 chr6A 79404548 79405053 505 False 427.0 427 82.00800 1049 1574 1 chr6A.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
588 4002 0.033011 AGTAGGGACGCTGATGGAGT 60.033 55.0 1.57 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2430 6092 0.108585 CGGGAGAGAGAGAGAGAGGG 59.891 65.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.512896 GGCCAGGCTGGGTAGATG 59.487 66.667 33.43 7.98 38.19 2.90
18 19 2.378634 GGCCAGGCTGGGTAGATGT 61.379 63.158 33.43 0.00 38.19 3.06
19 20 1.153086 GCCAGGCTGGGTAGATGTG 60.153 63.158 33.43 6.46 38.19 3.21
20 21 1.528824 CCAGGCTGGGTAGATGTGG 59.471 63.158 26.34 0.00 32.67 4.17
21 22 0.982852 CCAGGCTGGGTAGATGTGGA 60.983 60.000 26.34 0.00 32.67 4.02
22 23 0.467384 CAGGCTGGGTAGATGTGGAG 59.533 60.000 6.61 0.00 0.00 3.86
23 24 0.692419 AGGCTGGGTAGATGTGGAGG 60.692 60.000 0.00 0.00 0.00 4.30
24 25 0.983378 GGCTGGGTAGATGTGGAGGT 60.983 60.000 0.00 0.00 0.00 3.85
25 26 0.179000 GCTGGGTAGATGTGGAGGTG 59.821 60.000 0.00 0.00 0.00 4.00
26 27 1.866015 CTGGGTAGATGTGGAGGTGA 58.134 55.000 0.00 0.00 0.00 4.02
27 28 1.759445 CTGGGTAGATGTGGAGGTGAG 59.241 57.143 0.00 0.00 0.00 3.51
28 29 0.466124 GGGTAGATGTGGAGGTGAGC 59.534 60.000 0.00 0.00 0.00 4.26
29 30 1.490574 GGTAGATGTGGAGGTGAGCT 58.509 55.000 0.00 0.00 0.00 4.09
30 31 2.667470 GGTAGATGTGGAGGTGAGCTA 58.333 52.381 0.00 0.00 0.00 3.32
31 32 2.362717 GGTAGATGTGGAGGTGAGCTAC 59.637 54.545 0.00 0.00 0.00 3.58
32 33 2.541233 AGATGTGGAGGTGAGCTACT 57.459 50.000 0.00 0.00 0.00 2.57
33 34 2.826488 AGATGTGGAGGTGAGCTACTT 58.174 47.619 0.00 0.00 0.00 2.24
34 35 2.499289 AGATGTGGAGGTGAGCTACTTG 59.501 50.000 0.00 0.00 0.00 3.16
35 36 0.321671 TGTGGAGGTGAGCTACTTGC 59.678 55.000 0.00 0.00 43.29 4.01
36 37 0.321671 GTGGAGGTGAGCTACTTGCA 59.678 55.000 0.00 0.00 45.94 4.08
37 38 1.065854 GTGGAGGTGAGCTACTTGCAT 60.066 52.381 0.00 0.00 45.94 3.96
38 39 1.208052 TGGAGGTGAGCTACTTGCATC 59.792 52.381 0.00 0.00 45.94 3.91
39 40 1.208052 GGAGGTGAGCTACTTGCATCA 59.792 52.381 0.00 0.00 45.94 3.07
40 41 2.158842 GGAGGTGAGCTACTTGCATCAT 60.159 50.000 0.00 0.00 45.94 2.45
41 42 3.129871 GAGGTGAGCTACTTGCATCATC 58.870 50.000 0.00 0.00 45.94 2.92
42 43 1.863454 GGTGAGCTACTTGCATCATCG 59.137 52.381 0.00 0.00 45.94 3.84
43 44 2.481969 GGTGAGCTACTTGCATCATCGA 60.482 50.000 0.00 0.00 45.94 3.59
44 45 2.537625 GTGAGCTACTTGCATCATCGAC 59.462 50.000 0.00 0.00 45.94 4.20
45 46 2.428530 TGAGCTACTTGCATCATCGACT 59.571 45.455 0.00 0.00 45.94 4.18
46 47 3.049206 GAGCTACTTGCATCATCGACTC 58.951 50.000 0.00 0.00 45.94 3.36
47 48 1.783711 GCTACTTGCATCATCGACTCG 59.216 52.381 0.00 0.00 42.31 4.18
48 49 2.389059 CTACTTGCATCATCGACTCGG 58.611 52.381 0.00 0.00 0.00 4.63
49 50 0.179100 ACTTGCATCATCGACTCGGG 60.179 55.000 0.00 0.00 0.00 5.14
50 51 0.877649 CTTGCATCATCGACTCGGGG 60.878 60.000 0.00 0.00 0.00 5.73
51 52 1.613317 TTGCATCATCGACTCGGGGT 61.613 55.000 0.00 0.00 0.00 4.95
52 53 1.592669 GCATCATCGACTCGGGGTG 60.593 63.158 0.00 0.00 0.00 4.61
53 54 1.592669 CATCATCGACTCGGGGTGC 60.593 63.158 0.00 0.00 0.00 5.01
54 55 2.058001 ATCATCGACTCGGGGTGCA 61.058 57.895 0.00 0.00 0.00 4.57
55 56 2.021068 ATCATCGACTCGGGGTGCAG 62.021 60.000 0.00 0.00 0.00 4.41
56 57 3.461773 ATCGACTCGGGGTGCAGG 61.462 66.667 0.00 0.00 0.00 4.85
57 58 4.988716 TCGACTCGGGGTGCAGGT 62.989 66.667 0.00 0.00 0.00 4.00
58 59 4.742201 CGACTCGGGGTGCAGGTG 62.742 72.222 0.00 0.00 0.00 4.00
59 60 3.311110 GACTCGGGGTGCAGGTGA 61.311 66.667 0.00 0.00 0.00 4.02
60 61 3.302347 GACTCGGGGTGCAGGTGAG 62.302 68.421 0.00 0.00 0.00 3.51
61 62 4.087892 CTCGGGGTGCAGGTGAGG 62.088 72.222 0.00 0.00 0.00 3.86
62 63 4.954118 TCGGGGTGCAGGTGAGGT 62.954 66.667 0.00 0.00 0.00 3.85
63 64 3.000819 CGGGGTGCAGGTGAGGTA 61.001 66.667 0.00 0.00 0.00 3.08
64 65 2.669240 GGGGTGCAGGTGAGGTAC 59.331 66.667 0.00 0.00 0.00 3.34
65 66 2.221299 GGGGTGCAGGTGAGGTACA 61.221 63.158 0.00 0.00 0.00 2.90
66 67 1.296715 GGGTGCAGGTGAGGTACAG 59.703 63.158 0.00 0.00 0.00 2.74
67 68 1.481056 GGGTGCAGGTGAGGTACAGT 61.481 60.000 0.00 0.00 0.00 3.55
68 69 0.037232 GGTGCAGGTGAGGTACAGTC 60.037 60.000 0.00 0.00 0.00 3.51
69 70 0.679505 GTGCAGGTGAGGTACAGTCA 59.320 55.000 0.00 0.00 0.00 3.41
70 71 1.070134 GTGCAGGTGAGGTACAGTCAA 59.930 52.381 0.00 0.00 0.00 3.18
71 72 1.070134 TGCAGGTGAGGTACAGTCAAC 59.930 52.381 4.67 4.67 31.20 3.18
72 73 1.070134 GCAGGTGAGGTACAGTCAACA 59.930 52.381 13.38 0.00 33.75 3.33
73 74 2.484770 GCAGGTGAGGTACAGTCAACAA 60.485 50.000 13.38 0.00 33.75 2.83
74 75 3.131396 CAGGTGAGGTACAGTCAACAAC 58.869 50.000 13.38 0.00 33.75 3.32
75 76 2.104281 AGGTGAGGTACAGTCAACAACC 59.896 50.000 13.38 5.01 33.75 3.77
76 77 2.132762 GTGAGGTACAGTCAACAACCG 58.867 52.381 0.00 0.00 37.09 4.44
77 78 1.069513 TGAGGTACAGTCAACAACCGG 59.930 52.381 0.00 0.00 37.09 5.28
78 79 0.250166 AGGTACAGTCAACAACCGGC 60.250 55.000 0.00 0.00 37.09 6.13
79 80 0.533308 GGTACAGTCAACAACCGGCA 60.533 55.000 0.00 0.00 0.00 5.69
80 81 1.301423 GTACAGTCAACAACCGGCAA 58.699 50.000 0.00 0.00 0.00 4.52
81 82 1.263217 GTACAGTCAACAACCGGCAAG 59.737 52.381 0.00 0.00 0.00 4.01
82 83 0.107410 ACAGTCAACAACCGGCAAGA 60.107 50.000 0.00 0.00 0.00 3.02
83 84 1.238439 CAGTCAACAACCGGCAAGAT 58.762 50.000 0.00 0.00 0.00 2.40
84 85 1.197721 CAGTCAACAACCGGCAAGATC 59.802 52.381 0.00 0.00 0.00 2.75
85 86 1.202758 AGTCAACAACCGGCAAGATCA 60.203 47.619 0.00 0.00 0.00 2.92
86 87 1.812571 GTCAACAACCGGCAAGATCAT 59.187 47.619 0.00 0.00 0.00 2.45
87 88 1.811965 TCAACAACCGGCAAGATCATG 59.188 47.619 0.00 0.00 0.00 3.07
88 89 1.811965 CAACAACCGGCAAGATCATGA 59.188 47.619 0.00 0.00 0.00 3.07
89 90 1.742761 ACAACCGGCAAGATCATGAG 58.257 50.000 0.00 0.00 0.00 2.90
90 91 1.019673 CAACCGGCAAGATCATGAGG 58.980 55.000 0.00 6.72 0.00 3.86
91 92 0.749454 AACCGGCAAGATCATGAGGC 60.749 55.000 0.00 2.25 0.00 4.70
92 93 1.153107 CCGGCAAGATCATGAGGCA 60.153 57.895 1.25 0.00 0.00 4.75
93 94 0.749091 CCGGCAAGATCATGAGGCAA 60.749 55.000 1.25 0.00 0.00 4.52
94 95 0.661552 CGGCAAGATCATGAGGCAAG 59.338 55.000 1.25 0.00 0.00 4.01
95 96 1.030457 GGCAAGATCATGAGGCAAGG 58.970 55.000 1.25 0.00 0.00 3.61
96 97 1.409241 GGCAAGATCATGAGGCAAGGA 60.409 52.381 1.25 0.00 0.00 3.36
97 98 2.372264 GCAAGATCATGAGGCAAGGAA 58.628 47.619 1.25 0.00 0.00 3.36
98 99 2.098770 GCAAGATCATGAGGCAAGGAAC 59.901 50.000 1.25 0.00 0.00 3.62
99 100 3.349927 CAAGATCATGAGGCAAGGAACA 58.650 45.455 0.09 0.00 0.00 3.18
100 101 3.726557 AGATCATGAGGCAAGGAACAA 57.273 42.857 0.09 0.00 0.00 2.83
101 102 3.618351 AGATCATGAGGCAAGGAACAAG 58.382 45.455 0.09 0.00 0.00 3.16
102 103 1.538047 TCATGAGGCAAGGAACAAGC 58.462 50.000 0.00 0.00 0.00 4.01
103 104 1.202915 TCATGAGGCAAGGAACAAGCA 60.203 47.619 0.00 0.00 32.08 3.91
104 105 1.201647 CATGAGGCAAGGAACAAGCAG 59.798 52.381 0.00 0.00 32.08 4.24
105 106 0.538057 TGAGGCAAGGAACAAGCAGG 60.538 55.000 0.00 0.00 32.08 4.85
106 107 0.538287 GAGGCAAGGAACAAGCAGGT 60.538 55.000 0.00 0.00 32.08 4.00
107 108 0.825010 AGGCAAGGAACAAGCAGGTG 60.825 55.000 0.00 0.00 32.08 4.00
108 109 0.823356 GGCAAGGAACAAGCAGGTGA 60.823 55.000 0.00 0.00 32.08 4.02
109 110 0.595095 GCAAGGAACAAGCAGGTGAG 59.405 55.000 0.00 0.00 0.00 3.51
110 111 1.242076 CAAGGAACAAGCAGGTGAGG 58.758 55.000 0.00 0.00 0.00 3.86
111 112 0.846693 AAGGAACAAGCAGGTGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
112 113 1.729586 AGGAACAAGCAGGTGAGGTA 58.270 50.000 0.00 0.00 0.00 3.08
113 114 1.348036 AGGAACAAGCAGGTGAGGTAC 59.652 52.381 0.00 0.00 0.00 3.34
114 115 1.071699 GGAACAAGCAGGTGAGGTACA 59.928 52.381 0.00 0.00 0.00 2.90
115 116 2.417719 GAACAAGCAGGTGAGGTACAG 58.582 52.381 0.00 0.00 0.00 2.74
116 117 1.424638 ACAAGCAGGTGAGGTACAGT 58.575 50.000 0.00 0.00 0.00 3.55
117 118 1.344763 ACAAGCAGGTGAGGTACAGTC 59.655 52.381 0.00 0.00 0.00 3.51
118 119 1.344438 CAAGCAGGTGAGGTACAGTCA 59.656 52.381 0.00 0.00 0.00 3.41
119 120 1.717032 AGCAGGTGAGGTACAGTCAA 58.283 50.000 0.00 0.00 0.00 3.18
120 121 1.344763 AGCAGGTGAGGTACAGTCAAC 59.655 52.381 4.67 4.67 31.20 3.18
121 122 1.070134 GCAGGTGAGGTACAGTCAACA 59.930 52.381 13.38 0.00 33.75 3.33
122 123 2.484770 GCAGGTGAGGTACAGTCAACAA 60.485 50.000 13.38 0.00 33.75 2.83
123 124 3.131396 CAGGTGAGGTACAGTCAACAAC 58.869 50.000 13.38 0.00 33.75 3.32
124 125 2.104281 AGGTGAGGTACAGTCAACAACC 59.896 50.000 13.38 5.01 33.75 3.77
125 126 2.132762 GTGAGGTACAGTCAACAACCG 58.867 52.381 0.00 0.00 37.09 4.44
126 127 1.069513 TGAGGTACAGTCAACAACCGG 59.930 52.381 0.00 0.00 37.09 5.28
127 128 0.250166 AGGTACAGTCAACAACCGGC 60.250 55.000 0.00 0.00 37.09 6.13
128 129 0.533308 GGTACAGTCAACAACCGGCA 60.533 55.000 0.00 0.00 0.00 5.69
129 130 1.301423 GTACAGTCAACAACCGGCAA 58.699 50.000 0.00 0.00 0.00 4.52
130 131 1.263217 GTACAGTCAACAACCGGCAAG 59.737 52.381 0.00 0.00 0.00 4.01
131 132 0.107410 ACAGTCAACAACCGGCAAGA 60.107 50.000 0.00 0.00 0.00 3.02
132 133 1.238439 CAGTCAACAACCGGCAAGAT 58.762 50.000 0.00 0.00 0.00 2.40
133 134 1.197721 CAGTCAACAACCGGCAAGATC 59.802 52.381 0.00 0.00 0.00 2.75
134 135 1.202758 AGTCAACAACCGGCAAGATCA 60.203 47.619 0.00 0.00 0.00 2.92
135 136 1.812571 GTCAACAACCGGCAAGATCAT 59.187 47.619 0.00 0.00 0.00 2.45
136 137 1.811965 TCAACAACCGGCAAGATCATG 59.188 47.619 0.00 0.00 0.00 3.07
137 138 1.811965 CAACAACCGGCAAGATCATGA 59.188 47.619 0.00 0.00 0.00 3.07
138 139 1.742761 ACAACCGGCAAGATCATGAG 58.257 50.000 0.00 0.00 0.00 2.90
139 140 1.019673 CAACCGGCAAGATCATGAGG 58.980 55.000 0.00 6.72 0.00 3.86
140 141 0.749454 AACCGGCAAGATCATGAGGC 60.749 55.000 0.00 2.25 0.00 4.70
141 142 1.153107 CCGGCAAGATCATGAGGCA 60.153 57.895 1.25 0.00 0.00 4.75
142 143 0.749091 CCGGCAAGATCATGAGGCAA 60.749 55.000 1.25 0.00 0.00 4.52
143 144 0.661552 CGGCAAGATCATGAGGCAAG 59.338 55.000 1.25 0.00 0.00 4.01
144 145 1.030457 GGCAAGATCATGAGGCAAGG 58.970 55.000 1.25 0.00 0.00 3.61
145 146 1.409241 GGCAAGATCATGAGGCAAGGA 60.409 52.381 1.25 0.00 0.00 3.36
146 147 2.372264 GCAAGATCATGAGGCAAGGAA 58.628 47.619 1.25 0.00 0.00 3.36
147 148 2.098770 GCAAGATCATGAGGCAAGGAAC 59.901 50.000 1.25 0.00 0.00 3.62
148 149 3.349927 CAAGATCATGAGGCAAGGAACA 58.650 45.455 0.09 0.00 0.00 3.18
149 150 3.726557 AGATCATGAGGCAAGGAACAA 57.273 42.857 0.09 0.00 0.00 2.83
150 151 3.618351 AGATCATGAGGCAAGGAACAAG 58.382 45.455 0.09 0.00 0.00 3.16
151 152 1.538047 TCATGAGGCAAGGAACAAGC 58.462 50.000 0.00 0.00 0.00 4.01
152 153 1.202915 TCATGAGGCAAGGAACAAGCA 60.203 47.619 0.00 0.00 32.08 3.91
153 154 1.201647 CATGAGGCAAGGAACAAGCAG 59.798 52.381 0.00 0.00 32.08 4.24
154 155 0.538057 TGAGGCAAGGAACAAGCAGG 60.538 55.000 0.00 0.00 32.08 4.85
155 156 0.538287 GAGGCAAGGAACAAGCAGGT 60.538 55.000 0.00 0.00 32.08 4.00
156 157 0.825010 AGGCAAGGAACAAGCAGGTG 60.825 55.000 0.00 0.00 32.08 4.00
157 158 0.823356 GGCAAGGAACAAGCAGGTGA 60.823 55.000 0.00 0.00 32.08 4.02
158 159 0.595095 GCAAGGAACAAGCAGGTGAG 59.405 55.000 0.00 0.00 0.00 3.51
159 160 1.242076 CAAGGAACAAGCAGGTGAGG 58.758 55.000 0.00 0.00 0.00 3.86
160 161 0.846693 AAGGAACAAGCAGGTGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
161 162 1.729586 AGGAACAAGCAGGTGAGGTA 58.270 50.000 0.00 0.00 0.00 3.08
162 163 2.054799 AGGAACAAGCAGGTGAGGTAA 58.945 47.619 0.00 0.00 0.00 2.85
163 164 2.644798 AGGAACAAGCAGGTGAGGTAAT 59.355 45.455 0.00 0.00 0.00 1.89
164 165 3.844211 AGGAACAAGCAGGTGAGGTAATA 59.156 43.478 0.00 0.00 0.00 0.98
165 166 4.475016 AGGAACAAGCAGGTGAGGTAATAT 59.525 41.667 0.00 0.00 0.00 1.28
166 167 4.816925 GGAACAAGCAGGTGAGGTAATATC 59.183 45.833 0.00 0.00 0.00 1.63
167 168 4.060038 ACAAGCAGGTGAGGTAATATCG 57.940 45.455 0.00 0.00 0.00 2.92
168 169 3.704566 ACAAGCAGGTGAGGTAATATCGA 59.295 43.478 0.00 0.00 0.00 3.59
169 170 4.051922 CAAGCAGGTGAGGTAATATCGAC 58.948 47.826 0.00 0.00 0.00 4.20
170 171 2.628657 AGCAGGTGAGGTAATATCGACC 59.371 50.000 0.00 0.00 37.22 4.79
171 172 2.607282 GCAGGTGAGGTAATATCGACCG 60.607 54.545 0.00 0.00 42.21 4.79
172 173 2.882761 CAGGTGAGGTAATATCGACCGA 59.117 50.000 0.00 0.00 42.21 4.69
173 174 2.883386 AGGTGAGGTAATATCGACCGAC 59.117 50.000 0.00 3.45 42.21 4.79
174 175 2.620115 GGTGAGGTAATATCGACCGACA 59.380 50.000 0.00 8.64 42.21 4.35
175 176 3.549625 GGTGAGGTAATATCGACCGACAC 60.550 52.174 19.56 19.56 42.21 3.67
176 177 3.065786 GTGAGGTAATATCGACCGACACA 59.934 47.826 21.11 11.32 42.74 3.72
177 178 3.065786 TGAGGTAATATCGACCGACACAC 59.934 47.826 0.00 0.00 42.21 3.82
178 179 2.360165 AGGTAATATCGACCGACACACC 59.640 50.000 0.00 0.82 42.21 4.16
179 180 2.099592 GGTAATATCGACCGACACACCA 59.900 50.000 0.00 0.00 0.00 4.17
180 181 3.243636 GGTAATATCGACCGACACACCAT 60.244 47.826 0.00 0.00 0.00 3.55
181 182 3.536956 AATATCGACCGACACACCATT 57.463 42.857 0.00 0.00 0.00 3.16
182 183 2.572191 TATCGACCGACACACCATTC 57.428 50.000 0.00 0.00 0.00 2.67
183 184 0.895530 ATCGACCGACACACCATTCT 59.104 50.000 0.00 0.00 0.00 2.40
184 185 1.536940 TCGACCGACACACCATTCTA 58.463 50.000 0.00 0.00 0.00 2.10
185 186 2.097036 TCGACCGACACACCATTCTAT 58.903 47.619 0.00 0.00 0.00 1.98
186 187 2.494471 TCGACCGACACACCATTCTATT 59.506 45.455 0.00 0.00 0.00 1.73
187 188 3.695556 TCGACCGACACACCATTCTATTA 59.304 43.478 0.00 0.00 0.00 0.98
188 189 3.795101 CGACCGACACACCATTCTATTAC 59.205 47.826 0.00 0.00 0.00 1.89
189 190 4.117685 GACCGACACACCATTCTATTACC 58.882 47.826 0.00 0.00 0.00 2.85
190 191 3.773119 ACCGACACACCATTCTATTACCT 59.227 43.478 0.00 0.00 0.00 3.08
191 192 4.957954 ACCGACACACCATTCTATTACCTA 59.042 41.667 0.00 0.00 0.00 3.08
192 193 5.422970 ACCGACACACCATTCTATTACCTAA 59.577 40.000 0.00 0.00 0.00 2.69
193 194 5.983720 CCGACACACCATTCTATTACCTAAG 59.016 44.000 0.00 0.00 0.00 2.18
194 195 6.183360 CCGACACACCATTCTATTACCTAAGA 60.183 42.308 0.00 0.00 0.00 2.10
195 196 7.434492 CGACACACCATTCTATTACCTAAGAT 58.566 38.462 0.00 0.00 0.00 2.40
196 197 7.382488 CGACACACCATTCTATTACCTAAGATG 59.618 40.741 0.00 0.00 0.00 2.90
197 198 7.509546 ACACACCATTCTATTACCTAAGATGG 58.490 38.462 0.00 0.00 31.86 3.51
198 199 7.127339 ACACACCATTCTATTACCTAAGATGGT 59.873 37.037 0.00 0.00 43.66 3.55
199 200 7.442364 CACACCATTCTATTACCTAAGATGGTG 59.558 40.741 23.60 23.60 45.19 4.17
200 201 7.127339 ACACCATTCTATTACCTAAGATGGTGT 59.873 37.037 24.65 24.65 46.15 4.16
201 202 8.647796 CACCATTCTATTACCTAAGATGGTGTA 58.352 37.037 19.30 0.59 41.04 2.90
202 203 9.220906 ACCATTCTATTACCTAAGATGGTGTAA 57.779 33.333 4.46 0.00 41.05 2.41
211 212 7.463961 ACCTAAGATGGTGTAATATAGACGG 57.536 40.000 0.00 0.00 39.17 4.79
212 213 6.436532 ACCTAAGATGGTGTAATATAGACGGG 59.563 42.308 0.00 0.00 39.17 5.28
213 214 4.803098 AGATGGTGTAATATAGACGGGC 57.197 45.455 0.00 0.00 0.00 6.13
214 215 3.514309 AGATGGTGTAATATAGACGGGCC 59.486 47.826 0.00 0.00 0.00 5.80
215 216 2.966915 TGGTGTAATATAGACGGGCCT 58.033 47.619 0.84 0.00 0.00 5.19
216 217 4.116782 TGGTGTAATATAGACGGGCCTA 57.883 45.455 0.84 0.00 0.00 3.93
217 218 4.482030 TGGTGTAATATAGACGGGCCTAA 58.518 43.478 0.84 0.00 0.00 2.69
218 219 4.281688 TGGTGTAATATAGACGGGCCTAAC 59.718 45.833 0.84 0.00 0.00 2.34
219 220 4.525874 GGTGTAATATAGACGGGCCTAACT 59.474 45.833 0.84 1.80 0.00 2.24
220 221 5.711976 GGTGTAATATAGACGGGCCTAACTA 59.288 44.000 0.84 4.23 0.00 2.24
221 222 6.209391 GGTGTAATATAGACGGGCCTAACTAA 59.791 42.308 0.84 0.00 0.00 2.24
222 223 7.255942 GGTGTAATATAGACGGGCCTAACTAAA 60.256 40.741 0.84 0.00 0.00 1.85
223 224 7.596621 GTGTAATATAGACGGGCCTAACTAAAC 59.403 40.741 0.84 3.21 0.00 2.01
224 225 6.736110 AATATAGACGGGCCTAACTAAACA 57.264 37.500 0.84 0.00 0.00 2.83
225 226 2.756840 AGACGGGCCTAACTAAACAC 57.243 50.000 0.84 0.00 0.00 3.32
226 227 1.972795 AGACGGGCCTAACTAAACACA 59.027 47.619 0.84 0.00 0.00 3.72
227 228 2.570302 AGACGGGCCTAACTAAACACAT 59.430 45.455 0.84 0.00 0.00 3.21
228 229 3.008704 AGACGGGCCTAACTAAACACATT 59.991 43.478 0.84 0.00 0.00 2.71
229 230 4.223477 AGACGGGCCTAACTAAACACATTA 59.777 41.667 0.84 0.00 0.00 1.90
230 231 4.510571 ACGGGCCTAACTAAACACATTAG 58.489 43.478 0.84 0.00 45.48 1.73
231 232 4.223477 ACGGGCCTAACTAAACACATTAGA 59.777 41.667 0.84 0.00 43.16 2.10
232 233 5.104652 ACGGGCCTAACTAAACACATTAGAT 60.105 40.000 0.84 0.00 43.16 1.98
233 234 6.098695 ACGGGCCTAACTAAACACATTAGATA 59.901 38.462 0.84 0.00 43.16 1.98
234 235 6.423001 CGGGCCTAACTAAACACATTAGATAC 59.577 42.308 0.84 0.00 43.16 2.24
235 236 6.423001 GGGCCTAACTAAACACATTAGATACG 59.577 42.308 0.84 0.00 43.16 3.06
236 237 6.423001 GGCCTAACTAAACACATTAGATACGG 59.577 42.308 0.00 1.44 43.16 4.02
237 238 7.205297 GCCTAACTAAACACATTAGATACGGA 58.795 38.462 2.45 0.00 43.16 4.69
238 239 7.871463 GCCTAACTAAACACATTAGATACGGAT 59.129 37.037 2.45 0.00 43.16 4.18
239 240 9.193133 CCTAACTAAACACATTAGATACGGATG 57.807 37.037 2.45 0.00 43.16 3.51
240 241 7.478520 AACTAAACACATTAGATACGGATGC 57.521 36.000 2.45 0.00 43.16 3.91
241 242 5.989777 ACTAAACACATTAGATACGGATGCC 59.010 40.000 2.45 0.00 43.16 4.40
242 243 4.689612 AACACATTAGATACGGATGCCT 57.310 40.909 0.00 0.00 0.00 4.75
243 244 5.801531 AACACATTAGATACGGATGCCTA 57.198 39.130 0.00 0.00 0.00 3.93
244 245 6.360370 AACACATTAGATACGGATGCCTAT 57.640 37.500 0.00 0.00 0.00 2.57
245 246 7.476540 AACACATTAGATACGGATGCCTATA 57.523 36.000 0.00 0.00 0.00 1.31
246 247 7.661536 ACACATTAGATACGGATGCCTATAT 57.338 36.000 0.00 0.00 0.00 0.86
247 248 8.079211 ACACATTAGATACGGATGCCTATATT 57.921 34.615 0.00 0.00 0.00 1.28
248 249 8.540388 ACACATTAGATACGGATGCCTATATTT 58.460 33.333 0.00 0.00 0.00 1.40
249 250 9.035607 CACATTAGATACGGATGCCTATATTTC 57.964 37.037 0.00 0.00 0.00 2.17
250 251 7.921214 ACATTAGATACGGATGCCTATATTTCG 59.079 37.037 0.00 0.00 0.00 3.46
251 252 5.263968 AGATACGGATGCCTATATTTCGG 57.736 43.478 0.00 0.00 0.00 4.30
252 253 4.710375 AGATACGGATGCCTATATTTCGGT 59.290 41.667 0.00 0.00 0.00 4.69
253 254 5.889853 AGATACGGATGCCTATATTTCGGTA 59.110 40.000 0.00 0.00 0.00 4.02
254 255 4.184079 ACGGATGCCTATATTTCGGTAC 57.816 45.455 0.00 0.00 0.00 3.34
255 256 3.056322 ACGGATGCCTATATTTCGGTACC 60.056 47.826 0.16 0.16 0.00 3.34
256 257 3.677976 CGGATGCCTATATTTCGGTACCC 60.678 52.174 6.25 0.00 0.00 3.69
257 258 3.262405 GGATGCCTATATTTCGGTACCCA 59.738 47.826 6.25 0.00 0.00 4.51
258 259 4.080526 GGATGCCTATATTTCGGTACCCAT 60.081 45.833 6.25 0.00 0.00 4.00
259 260 4.546829 TGCCTATATTTCGGTACCCATC 57.453 45.455 6.25 0.00 0.00 3.51
265 266 2.325583 TTTCGGTACCCATCAGATGC 57.674 50.000 6.25 0.00 0.00 3.91
276 277 3.317149 CCCATCAGATGCAGTTATTGTGG 59.683 47.826 4.68 0.00 0.00 4.17
283 284 2.794103 TGCAGTTATTGTGGTGCATCT 58.206 42.857 0.00 0.00 40.93 2.90
284 285 2.488937 TGCAGTTATTGTGGTGCATCTG 59.511 45.455 0.00 0.00 40.93 2.90
289 1228 6.051074 CAGTTATTGTGGTGCATCTGATCTA 58.949 40.000 0.00 0.00 0.00 1.98
291 1230 6.709397 AGTTATTGTGGTGCATCTGATCTATG 59.291 38.462 0.00 0.00 0.00 2.23
295 1234 1.270518 GGTGCATCTGATCTATGGCGT 60.271 52.381 9.68 0.00 0.00 5.68
304 1243 7.113965 GCATCTGATCTATGGCGTTTATTTTTG 59.886 37.037 9.68 0.00 0.00 2.44
307 1246 5.359576 TGATCTATGGCGTTTATTTTTGGCT 59.640 36.000 0.00 0.00 0.00 4.75
313 1252 5.602628 TGGCGTTTATTTTTGGCTAAAACT 58.397 33.333 7.56 5.44 38.48 2.66
316 1255 6.422701 GGCGTTTATTTTTGGCTAAAACTTCT 59.577 34.615 7.56 0.00 38.48 2.85
355 1294 0.180406 ACTAAGGCCACCGCATAAGG 59.820 55.000 5.01 0.00 36.38 2.69
358 1297 1.562672 AAGGCCACCGCATAAGGTCT 61.563 55.000 5.01 0.00 43.89 3.85
359 1298 1.523938 GGCCACCGCATAAGGTCTC 60.524 63.158 0.00 0.00 43.89 3.36
360 1299 1.883084 GCCACCGCATAAGGTCTCG 60.883 63.158 0.00 0.00 43.89 4.04
361 1300 1.813859 CCACCGCATAAGGTCTCGA 59.186 57.895 0.00 0.00 43.89 4.04
366 1305 0.930742 CGCATAAGGTCTCGAGACGC 60.931 60.000 33.07 28.20 45.65 5.19
367 1306 0.100682 GCATAAGGTCTCGAGACGCA 59.899 55.000 33.07 22.64 45.65 5.24
394 1364 1.268437 GCTTCTTGATGCCGCTCATTC 60.268 52.381 0.00 0.00 35.05 2.67
406 1376 1.404181 CGCTCATTCCGAGGAAGTGAA 60.404 52.381 10.56 0.00 42.55 3.18
411 1381 4.569943 TCATTCCGAGGAAGTGAAGAAAG 58.430 43.478 10.56 0.00 37.56 2.62
417 1387 4.574828 CCGAGGAAGTGAAGAAAGACAAAA 59.425 41.667 0.00 0.00 0.00 2.44
425 1395 4.676924 GTGAAGAAAGACAAAATTCTGCCG 59.323 41.667 0.00 0.00 36.09 5.69
446 1416 0.320374 TGCATGGGCGTACCTATAGC 59.680 55.000 0.00 0.00 45.35 2.97
462 1432 1.403814 TAGCGTGCTCTGGCTAAGAT 58.596 50.000 0.00 0.00 38.71 2.40
469 1439 4.194640 GTGCTCTGGCTAAGATGATCAAA 58.805 43.478 0.00 0.00 39.59 2.69
470 1440 4.034975 GTGCTCTGGCTAAGATGATCAAAC 59.965 45.833 0.00 0.00 39.59 2.93
480 1452 3.489355 AGATGATCAAACTTGTGTGGCA 58.511 40.909 0.00 0.00 0.00 4.92
493 1465 3.073678 TGTGTGGCACATGAATGTAGAC 58.926 45.455 24.95 7.10 44.52 2.59
503 1475 4.935808 ACATGAATGTAGACGAAGGGAAAC 59.064 41.667 0.00 0.00 39.68 2.78
514 1486 9.355215 GTAGACGAAGGGAAACATGTATATATG 57.645 37.037 7.84 7.84 0.00 1.78
529 1504 9.755804 CATGTATATATGGACCATTAGTAGCAG 57.244 37.037 13.40 0.00 0.00 4.24
531 1506 6.874278 ATATATGGACCATTAGTAGCAGCA 57.126 37.500 13.40 0.00 0.00 4.41
535 1510 2.356069 GGACCATTAGTAGCAGCAAAGC 59.644 50.000 0.00 0.00 0.00 3.51
537 1512 3.420893 ACCATTAGTAGCAGCAAAGCAA 58.579 40.909 0.00 0.00 36.85 3.91
538 1513 3.441572 ACCATTAGTAGCAGCAAAGCAAG 59.558 43.478 0.00 0.00 36.85 4.01
539 1514 3.691118 CCATTAGTAGCAGCAAAGCAAGA 59.309 43.478 0.00 0.00 36.85 3.02
540 1515 4.156556 CCATTAGTAGCAGCAAAGCAAGAA 59.843 41.667 0.00 0.00 36.85 2.52
541 1516 5.335897 CCATTAGTAGCAGCAAAGCAAGAAA 60.336 40.000 0.00 0.00 36.85 2.52
542 1517 5.766150 TTAGTAGCAGCAAAGCAAGAAAA 57.234 34.783 0.00 0.00 36.85 2.29
543 1518 4.234530 AGTAGCAGCAAAGCAAGAAAAG 57.765 40.909 0.00 0.00 36.85 2.27
544 1519 3.885297 AGTAGCAGCAAAGCAAGAAAAGA 59.115 39.130 0.00 0.00 36.85 2.52
547 1522 3.885297 AGCAGCAAAGCAAGAAAAGAGTA 59.115 39.130 0.00 0.00 36.85 2.59
558 3972 5.651530 CAAGAAAAGAGTATGAGAGCGGTA 58.348 41.667 0.00 0.00 0.00 4.02
561 3975 1.611519 AGAGTATGAGAGCGGTAGGC 58.388 55.000 0.00 0.00 44.05 3.93
571 3985 1.837499 GCGGTAGGCCAGGGATAGT 60.837 63.158 5.01 0.00 34.80 2.12
588 4002 0.033011 AGTAGGGACGCTGATGGAGT 60.033 55.000 1.57 0.00 0.00 3.85
589 4003 1.214673 AGTAGGGACGCTGATGGAGTA 59.785 52.381 1.57 0.00 0.00 2.59
590 4004 1.609555 GTAGGGACGCTGATGGAGTAG 59.390 57.143 1.57 0.00 0.00 2.57
591 4005 0.033011 AGGGACGCTGATGGAGTAGT 60.033 55.000 0.00 0.00 0.00 2.73
592 4006 0.824759 GGGACGCTGATGGAGTAGTT 59.175 55.000 0.00 0.00 0.00 2.24
593 4007 1.207329 GGGACGCTGATGGAGTAGTTT 59.793 52.381 0.00 0.00 0.00 2.66
594 4008 2.541556 GGACGCTGATGGAGTAGTTTC 58.458 52.381 0.00 0.00 0.00 2.78
640 4054 3.214696 AGTTTGGAAGGTGACTGAAGG 57.785 47.619 0.00 0.00 42.68 3.46
690 4104 2.485302 CGAGACATGGCCCATGACAATA 60.485 50.000 29.99 0.00 43.81 1.90
697 4111 5.246656 ACATGGCCCATGACAATATAAATGG 59.753 40.000 29.99 0.00 43.81 3.16
720 4286 1.733399 GACCAACGAGCCGAGTGAC 60.733 63.158 1.50 0.00 0.00 3.67
750 4316 4.729227 TGAGAAACAAAACTTCCCAACC 57.271 40.909 0.00 0.00 0.00 3.77
802 4368 5.239525 AGTCGGTCCAGATTTTTCTCAAAAG 59.760 40.000 0.00 0.00 35.30 2.27
900 4506 0.586802 AGGAAGCGCTTCAAAACGAC 59.413 50.000 41.60 26.55 41.20 4.34
915 4521 3.726291 AACGACCAAATCCCAACAAAG 57.274 42.857 0.00 0.00 0.00 2.77
921 4527 3.323691 ACCAAATCCCAACAAAGCCTAAC 59.676 43.478 0.00 0.00 0.00 2.34
927 4533 4.394729 TCCCAACAAAGCCTAACAAGTAG 58.605 43.478 0.00 0.00 0.00 2.57
994 4600 2.478539 GCATCAAAATCTTCGCACCTCC 60.479 50.000 0.00 0.00 0.00 4.30
1568 5202 2.035442 GCCCCAAGTGCGACTTCTC 61.035 63.158 0.00 0.00 36.03 2.87
1615 5249 7.308229 GCCTTCACATTATCTGCAGGTAAATAG 60.308 40.741 22.75 16.98 0.00 1.73
1636 5275 1.890894 CGCTTCTTTCTCTCCGGGA 59.109 57.895 0.00 0.00 0.00 5.14
1801 5442 8.783833 CCTGTTGGGATGAAGATATATGTAAG 57.216 38.462 0.00 0.00 37.23 2.34
1921 5576 5.384063 TGTTTAGTGGTATTGTTGCATGG 57.616 39.130 0.00 0.00 0.00 3.66
1931 5587 3.988379 TTGTTGCATGGAAGTCTTGAC 57.012 42.857 0.00 0.00 0.00 3.18
2040 5696 1.618343 TCTTGTGATGACGAGGAGCAA 59.382 47.619 0.00 0.00 34.62 3.91
2129 5785 3.922240 CACATGCCTTGCTGTTATGAAAC 59.078 43.478 0.00 0.00 36.07 2.78
2133 5789 4.081406 TGCCTTGCTGTTATGAAACTCAT 58.919 39.130 0.00 0.00 40.72 2.90
2216 5873 5.629020 ACACTTAATGTTTTTGCTACATGCG 59.371 36.000 0.00 0.00 41.47 4.73
2224 5881 4.604843 TTTTGCTACATGCGATTCTGAG 57.395 40.909 0.00 0.00 46.63 3.35
2225 5882 2.229675 TGCTACATGCGATTCTGAGG 57.770 50.000 0.00 0.00 46.63 3.86
2238 5895 6.024049 GCGATTCTGAGGTTTTTGTTGATAG 58.976 40.000 0.00 0.00 0.00 2.08
2305 5963 9.882996 ACATCATATCTAACGCATATTTTGTTG 57.117 29.630 0.00 0.00 0.00 3.33
2318 5976 1.859302 TTTGTTGGATATGTGCCCCC 58.141 50.000 0.00 0.00 0.00 5.40
2388 6050 0.249868 CGGTCCCGCACATATGACAT 60.250 55.000 10.38 0.00 0.00 3.06
2412 6074 1.068954 GCTACTGCAGTTCAACAAGCC 60.069 52.381 27.06 7.59 39.41 4.35
2416 6078 1.363807 GCAGTTCAACAAGCCCCAC 59.636 57.895 0.00 0.00 0.00 4.61
2430 6092 1.903404 CCCACAGCTTGTTGGACCC 60.903 63.158 7.26 0.00 35.34 4.46
2431 6093 1.903404 CCACAGCTTGTTGGACCCC 60.903 63.158 0.04 0.00 0.00 4.95
2432 6094 1.903404 CACAGCTTGTTGGACCCCC 60.903 63.158 0.00 0.00 0.00 5.40
2433 6095 2.084930 ACAGCTTGTTGGACCCCCT 61.085 57.895 0.00 0.00 0.00 4.79
2434 6096 1.303643 CAGCTTGTTGGACCCCCTC 60.304 63.158 0.00 0.00 0.00 4.30
2435 6097 1.464198 AGCTTGTTGGACCCCCTCT 60.464 57.895 0.00 0.00 0.00 3.69
2440 6102 0.252284 TGTTGGACCCCCTCTCTCTC 60.252 60.000 0.00 0.00 0.00 3.20
2449 6111 0.108585 CCCTCTCTCTCTCTCTCCCG 59.891 65.000 0.00 0.00 0.00 5.14
2450 6112 0.837272 CCTCTCTCTCTCTCTCCCGT 59.163 60.000 0.00 0.00 0.00 5.28
2513 6397 4.096681 TGTGAAGAATAGAGGCTCCTTCA 58.903 43.478 22.15 22.15 40.33 3.02
2514 6398 4.161189 TGTGAAGAATAGAGGCTCCTTCAG 59.839 45.833 24.83 0.00 42.36 3.02
2565 7522 4.000988 CGGCTGGTTGTTTAAGAGTGTAT 58.999 43.478 0.00 0.00 0.00 2.29
2582 7539 4.934001 AGTGTATGTGCACAAGAATGAGAG 59.066 41.667 25.72 0.00 41.52 3.20
2591 7548 3.080319 ACAAGAATGAGAGAAGGCTTGC 58.920 45.455 3.46 0.00 36.97 4.01
2622 7609 4.380843 TTCAGGAAACCCTTGCAGAATA 57.619 40.909 0.00 0.00 0.00 1.75
2734 7721 9.612066 TTCATTGCTATGTAGTTGAACATATGA 57.388 29.630 10.38 0.00 40.59 2.15
2735 7722 9.612066 TCATTGCTATGTAGTTGAACATATGAA 57.388 29.630 10.38 0.00 40.59 2.57
2738 7725 9.612066 TTGCTATGTAGTTGAACATATGAATGA 57.388 29.630 10.38 0.00 40.59 2.57
2739 7726 9.264719 TGCTATGTAGTTGAACATATGAATGAG 57.735 33.333 10.38 0.00 40.59 2.90
2740 7727 9.481340 GCTATGTAGTTGAACATATGAATGAGA 57.519 33.333 10.38 0.00 40.59 3.27
2768 7755 9.612066 TCATATTCATTGCTATGTAGTTGAACA 57.388 29.630 8.01 0.00 33.34 3.18
2773 7760 9.612066 TTCATTGCTATGTAGTTGAACATATGA 57.388 29.630 10.38 0.00 40.59 2.15
2774 7761 9.612066 TCATTGCTATGTAGTTGAACATATGAA 57.388 29.630 10.38 0.00 40.59 2.57
2777 7764 9.612066 TTGCTATGTAGTTGAACATATGAATGA 57.388 29.630 10.38 0.00 40.59 2.57
2778 7765 9.045223 TGCTATGTAGTTGAACATATGAATGAC 57.955 33.333 10.38 3.11 40.59 3.06
2779 7766 8.217115 GCTATGTAGTTGAACATATGAATGACG 58.783 37.037 10.38 0.00 40.59 4.35
2780 7767 9.463443 CTATGTAGTTGAACATATGAATGACGA 57.537 33.333 10.38 0.00 40.59 4.20
2781 7768 8.893219 ATGTAGTTGAACATATGAATGACGAT 57.107 30.769 10.38 0.00 38.31 3.73
2782 7769 8.716646 TGTAGTTGAACATATGAATGACGATT 57.283 30.769 10.38 0.00 36.54 3.34
2783 7770 8.817100 TGTAGTTGAACATATGAATGACGATTC 58.183 33.333 10.38 0.69 38.85 2.52
2794 7781 6.245115 TGAATGACGATTCATATTCATGGC 57.755 37.500 0.00 0.00 42.56 4.40
2795 7782 5.999600 TGAATGACGATTCATATTCATGGCT 59.000 36.000 0.00 0.00 42.56 4.75
2796 7783 7.160726 TGAATGACGATTCATATTCATGGCTA 58.839 34.615 0.00 0.00 42.56 3.93
2797 7784 7.825761 TGAATGACGATTCATATTCATGGCTAT 59.174 33.333 0.00 0.00 42.56 2.97
2798 7785 6.973229 TGACGATTCATATTCATGGCTATG 57.027 37.500 3.17 3.17 35.57 2.23
2799 7786 6.466812 TGACGATTCATATTCATGGCTATGT 58.533 36.000 10.12 0.00 35.73 2.29
2800 7787 7.610865 TGACGATTCATATTCATGGCTATGTA 58.389 34.615 10.12 0.24 35.73 2.29
2801 7788 7.761249 TGACGATTCATATTCATGGCTATGTAG 59.239 37.037 10.12 0.00 35.73 2.74
2802 7789 7.615403 ACGATTCATATTCATGGCTATGTAGT 58.385 34.615 10.12 0.48 35.73 2.73
2803 7790 7.547019 ACGATTCATATTCATGGCTATGTAGTG 59.453 37.037 10.12 4.55 35.73 2.74
2804 7791 7.761249 CGATTCATATTCATGGCTATGTAGTGA 59.239 37.037 10.12 6.69 35.73 3.41
2805 7792 9.440773 GATTCATATTCATGGCTATGTAGTGAA 57.559 33.333 16.33 16.33 35.73 3.18
2806 7793 8.607441 TTCATATTCATGGCTATGTAGTGAAC 57.393 34.615 10.12 0.00 35.73 3.18
2807 7794 7.734942 TCATATTCATGGCTATGTAGTGAACA 58.265 34.615 10.12 0.00 36.21 3.18
2808 7795 8.377799 TCATATTCATGGCTATGTAGTGAACAT 58.622 33.333 10.12 0.00 41.05 2.71
2848 7835 2.039480 GCTAGCCAGGATCCATGATGAA 59.961 50.000 15.82 0.00 0.00 2.57
2851 7838 2.714793 AGCCAGGATCCATGATGAATCA 59.285 45.455 15.82 0.00 41.70 2.57
2904 7894 8.651389 TGAGGAATCTTCTAATATACACCTTGG 58.349 37.037 0.00 0.00 0.00 3.61
2905 7895 8.798975 AGGAATCTTCTAATATACACCTTGGA 57.201 34.615 0.00 0.00 0.00 3.53
2906 7896 9.398921 AGGAATCTTCTAATATACACCTTGGAT 57.601 33.333 0.00 0.00 0.00 3.41
2907 7897 9.442047 GGAATCTTCTAATATACACCTTGGATG 57.558 37.037 0.00 0.00 0.00 3.51
2908 7898 8.854614 AATCTTCTAATATACACCTTGGATGC 57.145 34.615 0.00 0.00 0.00 3.91
2909 7899 7.373617 TCTTCTAATATACACCTTGGATGCA 57.626 36.000 0.00 0.00 0.00 3.96
2910 7900 7.217200 TCTTCTAATATACACCTTGGATGCAC 58.783 38.462 0.00 0.00 0.00 4.57
2911 7901 6.493189 TCTAATATACACCTTGGATGCACA 57.507 37.500 0.00 0.00 0.00 4.57
2912 7902 7.078249 TCTAATATACACCTTGGATGCACAT 57.922 36.000 0.00 0.00 0.00 3.21
2913 7903 6.936335 TCTAATATACACCTTGGATGCACATG 59.064 38.462 0.00 0.00 0.00 3.21
2914 7904 2.877097 TACACCTTGGATGCACATGT 57.123 45.000 0.00 0.00 0.00 3.21
2915 7905 1.250328 ACACCTTGGATGCACATGTG 58.750 50.000 21.83 21.83 32.77 3.21
2916 7906 0.528924 CACCTTGGATGCACATGTGG 59.471 55.000 26.55 10.31 0.00 4.17
2917 7907 0.405198 ACCTTGGATGCACATGTGGA 59.595 50.000 26.55 24.83 34.81 4.02
2918 7908 0.813184 CCTTGGATGCACATGTGGAC 59.187 55.000 26.55 17.34 32.58 4.02
2919 7909 0.448990 CTTGGATGCACATGTGGACG 59.551 55.000 26.55 7.81 32.58 4.79
2920 7910 0.036022 TTGGATGCACATGTGGACGA 59.964 50.000 26.55 10.58 32.58 4.20
2921 7911 0.252761 TGGATGCACATGTGGACGAT 59.747 50.000 26.55 9.87 32.58 3.73
2922 7912 1.484240 TGGATGCACATGTGGACGATA 59.516 47.619 26.55 9.32 32.58 2.92
2923 7913 1.867233 GGATGCACATGTGGACGATAC 59.133 52.381 26.55 6.94 32.58 2.24
2924 7914 2.549926 GATGCACATGTGGACGATACA 58.450 47.619 26.55 14.32 32.58 2.29
2925 7915 2.008752 TGCACATGTGGACGATACAG 57.991 50.000 26.55 0.00 0.00 2.74
2926 7916 1.548269 TGCACATGTGGACGATACAGA 59.452 47.619 26.55 0.00 0.00 3.41
2927 7917 2.028567 TGCACATGTGGACGATACAGAA 60.029 45.455 26.55 0.00 0.00 3.02
2928 7918 3.000041 GCACATGTGGACGATACAGAAA 59.000 45.455 26.55 0.00 0.00 2.52
2929 7919 3.062639 GCACATGTGGACGATACAGAAAG 59.937 47.826 26.55 0.00 0.00 2.62
2930 7920 3.618594 CACATGTGGACGATACAGAAAGG 59.381 47.826 18.51 0.00 0.00 3.11
2931 7921 2.380084 TGTGGACGATACAGAAAGGC 57.620 50.000 0.00 0.00 0.00 4.35
2932 7922 1.621317 TGTGGACGATACAGAAAGGCA 59.379 47.619 0.00 0.00 0.00 4.75
2933 7923 2.000447 GTGGACGATACAGAAAGGCAC 59.000 52.381 0.00 0.00 0.00 5.01
2945 7935 3.151906 AGGCACTTTCGCACCTCT 58.848 55.556 0.00 0.00 27.25 3.69
2946 7936 2.362242 AGGCACTTTCGCACCTCTA 58.638 52.632 0.00 0.00 27.25 2.43
2947 7937 0.905357 AGGCACTTTCGCACCTCTAT 59.095 50.000 0.00 0.00 27.25 1.98
2948 7938 1.279271 AGGCACTTTCGCACCTCTATT 59.721 47.619 0.00 0.00 27.25 1.73
2949 7939 1.666189 GGCACTTTCGCACCTCTATTC 59.334 52.381 0.00 0.00 0.00 1.75
2950 7940 2.622436 GCACTTTCGCACCTCTATTCT 58.378 47.619 0.00 0.00 0.00 2.40
2951 7941 2.349886 GCACTTTCGCACCTCTATTCTG 59.650 50.000 0.00 0.00 0.00 3.02
2952 7942 2.349886 CACTTTCGCACCTCTATTCTGC 59.650 50.000 0.00 0.00 0.00 4.26
2953 7943 2.234908 ACTTTCGCACCTCTATTCTGCT 59.765 45.455 0.00 0.00 0.00 4.24
2954 7944 2.299993 TTCGCACCTCTATTCTGCTG 57.700 50.000 0.00 0.00 0.00 4.41
2955 7945 1.474330 TCGCACCTCTATTCTGCTGA 58.526 50.000 0.00 0.00 0.00 4.26
2956 7946 1.824852 TCGCACCTCTATTCTGCTGAA 59.175 47.619 8.59 8.59 36.54 3.02
2957 7947 2.159184 TCGCACCTCTATTCTGCTGAAG 60.159 50.000 11.86 0.00 35.44 3.02
2958 7948 2.559440 GCACCTCTATTCTGCTGAAGG 58.441 52.381 11.86 9.43 35.44 3.46
2959 7949 2.169352 GCACCTCTATTCTGCTGAAGGA 59.831 50.000 14.09 11.84 35.44 3.36
2960 7950 3.740764 GCACCTCTATTCTGCTGAAGGAG 60.741 52.174 21.29 21.29 36.58 3.69
2969 7959 3.217242 GCTGAAGGAGCTTTGACGA 57.783 52.632 0.00 0.00 45.21 4.20
2970 7960 1.731720 GCTGAAGGAGCTTTGACGAT 58.268 50.000 0.00 0.00 45.21 3.73
2971 7961 2.079925 GCTGAAGGAGCTTTGACGATT 58.920 47.619 0.00 0.00 45.21 3.34
2972 7962 2.095053 GCTGAAGGAGCTTTGACGATTC 59.905 50.000 0.00 0.00 45.21 2.52
2973 7963 3.594134 CTGAAGGAGCTTTGACGATTCT 58.406 45.455 0.00 0.00 0.00 2.40
2974 7964 3.329386 TGAAGGAGCTTTGACGATTCTG 58.671 45.455 0.00 0.00 0.00 3.02
2975 7965 3.006859 TGAAGGAGCTTTGACGATTCTGA 59.993 43.478 0.00 0.00 0.00 3.27
2976 7966 3.902881 AGGAGCTTTGACGATTCTGAT 57.097 42.857 0.00 0.00 0.00 2.90
2977 7967 5.105351 TGAAGGAGCTTTGACGATTCTGATA 60.105 40.000 0.00 0.00 0.00 2.15
2978 7968 4.942852 AGGAGCTTTGACGATTCTGATAG 58.057 43.478 0.00 0.00 0.00 2.08
2979 7969 3.492756 GGAGCTTTGACGATTCTGATAGC 59.507 47.826 0.00 0.00 0.00 2.97
2980 7970 3.462021 AGCTTTGACGATTCTGATAGCC 58.538 45.455 0.00 0.00 0.00 3.93
2981 7971 3.118629 AGCTTTGACGATTCTGATAGCCA 60.119 43.478 0.00 0.00 0.00 4.75
2982 7972 3.001736 GCTTTGACGATTCTGATAGCCAC 59.998 47.826 0.00 0.00 0.00 5.01
2983 7973 2.890808 TGACGATTCTGATAGCCACC 57.109 50.000 0.00 0.00 0.00 4.61
2984 7974 2.388735 TGACGATTCTGATAGCCACCT 58.611 47.619 0.00 0.00 0.00 4.00
2985 7975 2.766263 TGACGATTCTGATAGCCACCTT 59.234 45.455 0.00 0.00 0.00 3.50
2986 7976 3.197766 TGACGATTCTGATAGCCACCTTT 59.802 43.478 0.00 0.00 0.00 3.11
2987 7977 4.192317 GACGATTCTGATAGCCACCTTTT 58.808 43.478 0.00 0.00 0.00 2.27
2988 7978 4.589908 ACGATTCTGATAGCCACCTTTTT 58.410 39.130 0.00 0.00 0.00 1.94
2989 7979 4.636206 ACGATTCTGATAGCCACCTTTTTC 59.364 41.667 0.00 0.00 0.00 2.29
2990 7980 4.035675 CGATTCTGATAGCCACCTTTTTCC 59.964 45.833 0.00 0.00 0.00 3.13
2991 7981 4.657814 TTCTGATAGCCACCTTTTTCCT 57.342 40.909 0.00 0.00 0.00 3.36
2992 7982 5.772393 TTCTGATAGCCACCTTTTTCCTA 57.228 39.130 0.00 0.00 0.00 2.94
2993 7983 5.772393 TCTGATAGCCACCTTTTTCCTAA 57.228 39.130 0.00 0.00 0.00 2.69
2994 7984 6.327386 TCTGATAGCCACCTTTTTCCTAAT 57.673 37.500 0.00 0.00 0.00 1.73
2995 7985 7.446106 TCTGATAGCCACCTTTTTCCTAATA 57.554 36.000 0.00 0.00 0.00 0.98
2996 7986 8.045720 TCTGATAGCCACCTTTTTCCTAATAT 57.954 34.615 0.00 0.00 0.00 1.28
2997 7987 8.502738 TCTGATAGCCACCTTTTTCCTAATATT 58.497 33.333 0.00 0.00 0.00 1.28
2998 7988 9.793259 CTGATAGCCACCTTTTTCCTAATATTA 57.207 33.333 0.00 0.00 0.00 0.98
3041 8031 9.717942 TTTGGTGATAAATTAATTTCACCTTGG 57.282 29.630 32.58 0.00 41.52 3.61
3042 8032 8.657387 TGGTGATAAATTAATTTCACCTTGGA 57.343 30.769 32.58 20.36 41.52 3.53
3043 8033 9.265862 TGGTGATAAATTAATTTCACCTTGGAT 57.734 29.630 32.58 16.26 41.52 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.982852 TCCACATCTACCCAGCCTGG 60.983 60.000 2.91 2.91 37.25 4.45
3 4 0.467384 CTCCACATCTACCCAGCCTG 59.533 60.000 0.00 0.00 0.00 4.85
4 5 0.692419 CCTCCACATCTACCCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
5 6 0.983378 ACCTCCACATCTACCCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
6 7 0.179000 CACCTCCACATCTACCCAGC 59.821 60.000 0.00 0.00 0.00 4.85
7 8 1.759445 CTCACCTCCACATCTACCCAG 59.241 57.143 0.00 0.00 0.00 4.45
8 9 1.866015 CTCACCTCCACATCTACCCA 58.134 55.000 0.00 0.00 0.00 4.51
9 10 0.466124 GCTCACCTCCACATCTACCC 59.534 60.000 0.00 0.00 0.00 3.69
10 11 1.490574 AGCTCACCTCCACATCTACC 58.509 55.000 0.00 0.00 0.00 3.18
11 12 3.292460 AGTAGCTCACCTCCACATCTAC 58.708 50.000 0.00 0.00 0.00 2.59
12 13 3.671740 AGTAGCTCACCTCCACATCTA 57.328 47.619 0.00 0.00 0.00 1.98
13 14 2.499289 CAAGTAGCTCACCTCCACATCT 59.501 50.000 0.00 0.00 0.00 2.90
14 15 2.898705 CAAGTAGCTCACCTCCACATC 58.101 52.381 0.00 0.00 0.00 3.06
15 16 1.065854 GCAAGTAGCTCACCTCCACAT 60.066 52.381 0.00 0.00 41.15 3.21
16 17 0.321671 GCAAGTAGCTCACCTCCACA 59.678 55.000 0.00 0.00 41.15 4.17
17 18 0.321671 TGCAAGTAGCTCACCTCCAC 59.678 55.000 0.00 0.00 45.94 4.02
18 19 1.208052 GATGCAAGTAGCTCACCTCCA 59.792 52.381 0.00 0.00 45.94 3.86
19 20 1.208052 TGATGCAAGTAGCTCACCTCC 59.792 52.381 0.00 0.00 45.94 4.30
20 21 2.680312 TGATGCAAGTAGCTCACCTC 57.320 50.000 0.00 0.00 45.94 3.85
21 22 2.482664 CGATGATGCAAGTAGCTCACCT 60.483 50.000 0.00 0.00 45.94 4.00
22 23 1.863454 CGATGATGCAAGTAGCTCACC 59.137 52.381 0.00 0.00 45.94 4.02
23 24 2.537625 GTCGATGATGCAAGTAGCTCAC 59.462 50.000 0.00 0.00 45.94 3.51
24 25 2.428530 AGTCGATGATGCAAGTAGCTCA 59.571 45.455 0.00 0.00 45.94 4.26
25 26 3.049206 GAGTCGATGATGCAAGTAGCTC 58.951 50.000 0.00 0.00 45.94 4.09
26 27 2.542618 CGAGTCGATGATGCAAGTAGCT 60.543 50.000 6.73 0.00 45.94 3.32
27 28 1.783711 CGAGTCGATGATGCAAGTAGC 59.216 52.381 6.73 0.00 45.96 3.58
28 29 2.389059 CCGAGTCGATGATGCAAGTAG 58.611 52.381 15.64 0.00 0.00 2.57
29 30 1.067060 CCCGAGTCGATGATGCAAGTA 59.933 52.381 15.64 0.00 0.00 2.24
30 31 0.179100 CCCGAGTCGATGATGCAAGT 60.179 55.000 15.64 0.00 0.00 3.16
31 32 0.877649 CCCCGAGTCGATGATGCAAG 60.878 60.000 15.64 0.00 0.00 4.01
32 33 1.143838 CCCCGAGTCGATGATGCAA 59.856 57.895 15.64 0.00 0.00 4.08
33 34 2.058001 ACCCCGAGTCGATGATGCA 61.058 57.895 15.64 0.00 0.00 3.96
34 35 1.592669 CACCCCGAGTCGATGATGC 60.593 63.158 15.64 0.00 0.00 3.91
35 36 1.592669 GCACCCCGAGTCGATGATG 60.593 63.158 15.64 7.82 0.00 3.07
36 37 2.021068 CTGCACCCCGAGTCGATGAT 62.021 60.000 15.64 0.00 0.00 2.45
37 38 2.678580 TGCACCCCGAGTCGATGA 60.679 61.111 15.64 0.00 0.00 2.92
38 39 2.202797 CTGCACCCCGAGTCGATG 60.203 66.667 15.64 10.37 0.00 3.84
39 40 3.461773 CCTGCACCCCGAGTCGAT 61.462 66.667 15.64 0.00 0.00 3.59
40 41 4.988716 ACCTGCACCCCGAGTCGA 62.989 66.667 15.64 0.00 0.00 4.20
41 42 4.742201 CACCTGCACCCCGAGTCG 62.742 72.222 5.29 5.29 0.00 4.18
42 43 3.302347 CTCACCTGCACCCCGAGTC 62.302 68.421 0.00 0.00 0.00 3.36
43 44 3.314331 CTCACCTGCACCCCGAGT 61.314 66.667 0.00 0.00 0.00 4.18
44 45 4.087892 CCTCACCTGCACCCCGAG 62.088 72.222 0.00 0.00 0.00 4.63
45 46 3.533079 TACCTCACCTGCACCCCGA 62.533 63.158 0.00 0.00 0.00 5.14
46 47 3.000819 TACCTCACCTGCACCCCG 61.001 66.667 0.00 0.00 0.00 5.73
47 48 2.185310 CTGTACCTCACCTGCACCCC 62.185 65.000 0.00 0.00 0.00 4.95
48 49 1.296715 CTGTACCTCACCTGCACCC 59.703 63.158 0.00 0.00 0.00 4.61
49 50 0.037232 GACTGTACCTCACCTGCACC 60.037 60.000 0.00 0.00 0.00 5.01
50 51 0.679505 TGACTGTACCTCACCTGCAC 59.320 55.000 0.00 0.00 0.00 4.57
51 52 1.070134 GTTGACTGTACCTCACCTGCA 59.930 52.381 0.00 0.00 0.00 4.41
52 53 1.070134 TGTTGACTGTACCTCACCTGC 59.930 52.381 0.00 0.00 0.00 4.85
53 54 3.131396 GTTGTTGACTGTACCTCACCTG 58.869 50.000 0.00 0.00 0.00 4.00
54 55 2.104281 GGTTGTTGACTGTACCTCACCT 59.896 50.000 0.00 0.00 0.00 4.00
55 56 2.490991 GGTTGTTGACTGTACCTCACC 58.509 52.381 0.00 0.00 0.00 4.02
56 57 2.132762 CGGTTGTTGACTGTACCTCAC 58.867 52.381 0.00 0.00 0.00 3.51
57 58 1.069513 CCGGTTGTTGACTGTACCTCA 59.930 52.381 0.00 0.00 32.41 3.86
58 59 1.792006 CCGGTTGTTGACTGTACCTC 58.208 55.000 0.00 0.00 32.41 3.85
59 60 0.250166 GCCGGTTGTTGACTGTACCT 60.250 55.000 1.90 0.00 32.41 3.08
60 61 0.533308 TGCCGGTTGTTGACTGTACC 60.533 55.000 1.90 0.00 32.41 3.34
61 62 1.263217 CTTGCCGGTTGTTGACTGTAC 59.737 52.381 1.90 0.00 32.41 2.90
62 63 1.139256 TCTTGCCGGTTGTTGACTGTA 59.861 47.619 1.90 0.00 32.41 2.74
63 64 0.107410 TCTTGCCGGTTGTTGACTGT 60.107 50.000 1.90 0.00 32.41 3.55
64 65 1.197721 GATCTTGCCGGTTGTTGACTG 59.802 52.381 1.90 0.00 0.00 3.51
65 66 1.202758 TGATCTTGCCGGTTGTTGACT 60.203 47.619 1.90 0.00 0.00 3.41
66 67 1.234821 TGATCTTGCCGGTTGTTGAC 58.765 50.000 1.90 0.00 0.00 3.18
67 68 1.811965 CATGATCTTGCCGGTTGTTGA 59.188 47.619 1.90 0.00 0.00 3.18
68 69 1.811965 TCATGATCTTGCCGGTTGTTG 59.188 47.619 1.90 0.00 0.00 3.33
69 70 2.086869 CTCATGATCTTGCCGGTTGTT 58.913 47.619 1.90 0.00 0.00 2.83
70 71 1.679944 CCTCATGATCTTGCCGGTTGT 60.680 52.381 1.90 0.00 0.00 3.32
71 72 1.019673 CCTCATGATCTTGCCGGTTG 58.980 55.000 1.90 0.00 0.00 3.77
72 73 0.749454 GCCTCATGATCTTGCCGGTT 60.749 55.000 1.90 0.00 0.00 4.44
73 74 1.153086 GCCTCATGATCTTGCCGGT 60.153 57.895 1.90 0.00 0.00 5.28
74 75 0.749091 TTGCCTCATGATCTTGCCGG 60.749 55.000 0.00 0.00 0.00 6.13
75 76 0.661552 CTTGCCTCATGATCTTGCCG 59.338 55.000 0.00 0.00 0.00 5.69
76 77 1.030457 CCTTGCCTCATGATCTTGCC 58.970 55.000 0.00 0.00 0.00 4.52
77 78 2.048444 TCCTTGCCTCATGATCTTGC 57.952 50.000 0.00 0.00 0.00 4.01
78 79 3.349927 TGTTCCTTGCCTCATGATCTTG 58.650 45.455 0.00 2.18 0.00 3.02
79 80 3.726557 TGTTCCTTGCCTCATGATCTT 57.273 42.857 0.00 0.00 0.00 2.40
80 81 3.618351 CTTGTTCCTTGCCTCATGATCT 58.382 45.455 0.00 0.00 0.00 2.75
81 82 2.098770 GCTTGTTCCTTGCCTCATGATC 59.901 50.000 0.00 0.00 0.00 2.92
82 83 2.097825 GCTTGTTCCTTGCCTCATGAT 58.902 47.619 0.00 0.00 0.00 2.45
83 84 1.202915 TGCTTGTTCCTTGCCTCATGA 60.203 47.619 0.00 0.00 0.00 3.07
84 85 1.201647 CTGCTTGTTCCTTGCCTCATG 59.798 52.381 0.00 0.00 0.00 3.07
85 86 1.542492 CTGCTTGTTCCTTGCCTCAT 58.458 50.000 0.00 0.00 0.00 2.90
86 87 0.538057 CCTGCTTGTTCCTTGCCTCA 60.538 55.000 0.00 0.00 0.00 3.86
87 88 0.538287 ACCTGCTTGTTCCTTGCCTC 60.538 55.000 0.00 0.00 0.00 4.70
88 89 0.825010 CACCTGCTTGTTCCTTGCCT 60.825 55.000 0.00 0.00 0.00 4.75
89 90 0.823356 TCACCTGCTTGTTCCTTGCC 60.823 55.000 0.00 0.00 0.00 4.52
90 91 0.595095 CTCACCTGCTTGTTCCTTGC 59.405 55.000 0.00 0.00 0.00 4.01
91 92 1.242076 CCTCACCTGCTTGTTCCTTG 58.758 55.000 0.00 0.00 0.00 3.61
92 93 0.846693 ACCTCACCTGCTTGTTCCTT 59.153 50.000 0.00 0.00 0.00 3.36
93 94 1.348036 GTACCTCACCTGCTTGTTCCT 59.652 52.381 0.00 0.00 0.00 3.36
94 95 1.071699 TGTACCTCACCTGCTTGTTCC 59.928 52.381 0.00 0.00 0.00 3.62
95 96 2.224305 ACTGTACCTCACCTGCTTGTTC 60.224 50.000 0.00 0.00 0.00 3.18
96 97 1.768870 ACTGTACCTCACCTGCTTGTT 59.231 47.619 0.00 0.00 0.00 2.83
97 98 1.344763 GACTGTACCTCACCTGCTTGT 59.655 52.381 0.00 0.00 0.00 3.16
98 99 1.344438 TGACTGTACCTCACCTGCTTG 59.656 52.381 0.00 0.00 0.00 4.01
99 100 1.717032 TGACTGTACCTCACCTGCTT 58.283 50.000 0.00 0.00 0.00 3.91
100 101 1.344763 GTTGACTGTACCTCACCTGCT 59.655 52.381 0.00 0.00 0.00 4.24
101 102 1.070134 TGTTGACTGTACCTCACCTGC 59.930 52.381 0.00 0.00 0.00 4.85
102 103 3.131396 GTTGTTGACTGTACCTCACCTG 58.869 50.000 0.00 0.00 0.00 4.00
103 104 2.104281 GGTTGTTGACTGTACCTCACCT 59.896 50.000 0.00 0.00 0.00 4.00
104 105 2.490991 GGTTGTTGACTGTACCTCACC 58.509 52.381 0.00 0.00 0.00 4.02
105 106 2.132762 CGGTTGTTGACTGTACCTCAC 58.867 52.381 0.00 0.00 0.00 3.51
106 107 1.069513 CCGGTTGTTGACTGTACCTCA 59.930 52.381 0.00 0.00 32.41 3.86
107 108 1.792006 CCGGTTGTTGACTGTACCTC 58.208 55.000 0.00 0.00 32.41 3.85
108 109 0.250166 GCCGGTTGTTGACTGTACCT 60.250 55.000 1.90 0.00 32.41 3.08
109 110 0.533308 TGCCGGTTGTTGACTGTACC 60.533 55.000 1.90 0.00 32.41 3.34
110 111 1.263217 CTTGCCGGTTGTTGACTGTAC 59.737 52.381 1.90 0.00 32.41 2.90
111 112 1.139256 TCTTGCCGGTTGTTGACTGTA 59.861 47.619 1.90 0.00 32.41 2.74
112 113 0.107410 TCTTGCCGGTTGTTGACTGT 60.107 50.000 1.90 0.00 32.41 3.55
113 114 1.197721 GATCTTGCCGGTTGTTGACTG 59.802 52.381 1.90 0.00 0.00 3.51
114 115 1.202758 TGATCTTGCCGGTTGTTGACT 60.203 47.619 1.90 0.00 0.00 3.41
115 116 1.234821 TGATCTTGCCGGTTGTTGAC 58.765 50.000 1.90 0.00 0.00 3.18
116 117 1.811965 CATGATCTTGCCGGTTGTTGA 59.188 47.619 1.90 0.00 0.00 3.18
117 118 1.811965 TCATGATCTTGCCGGTTGTTG 59.188 47.619 1.90 0.00 0.00 3.33
118 119 2.086869 CTCATGATCTTGCCGGTTGTT 58.913 47.619 1.90 0.00 0.00 2.83
119 120 1.679944 CCTCATGATCTTGCCGGTTGT 60.680 52.381 1.90 0.00 0.00 3.32
120 121 1.019673 CCTCATGATCTTGCCGGTTG 58.980 55.000 1.90 0.00 0.00 3.77
121 122 0.749454 GCCTCATGATCTTGCCGGTT 60.749 55.000 1.90 0.00 0.00 4.44
122 123 1.153086 GCCTCATGATCTTGCCGGT 60.153 57.895 1.90 0.00 0.00 5.28
123 124 0.749091 TTGCCTCATGATCTTGCCGG 60.749 55.000 0.00 0.00 0.00 6.13
124 125 0.661552 CTTGCCTCATGATCTTGCCG 59.338 55.000 0.00 0.00 0.00 5.69
125 126 1.030457 CCTTGCCTCATGATCTTGCC 58.970 55.000 0.00 0.00 0.00 4.52
126 127 2.048444 TCCTTGCCTCATGATCTTGC 57.952 50.000 0.00 0.00 0.00 4.01
127 128 3.349927 TGTTCCTTGCCTCATGATCTTG 58.650 45.455 0.00 2.18 0.00 3.02
128 129 3.726557 TGTTCCTTGCCTCATGATCTT 57.273 42.857 0.00 0.00 0.00 2.40
129 130 3.618351 CTTGTTCCTTGCCTCATGATCT 58.382 45.455 0.00 0.00 0.00 2.75
130 131 2.098770 GCTTGTTCCTTGCCTCATGATC 59.901 50.000 0.00 0.00 0.00 2.92
131 132 2.097825 GCTTGTTCCTTGCCTCATGAT 58.902 47.619 0.00 0.00 0.00 2.45
132 133 1.202915 TGCTTGTTCCTTGCCTCATGA 60.203 47.619 0.00 0.00 0.00 3.07
133 134 1.201647 CTGCTTGTTCCTTGCCTCATG 59.798 52.381 0.00 0.00 0.00 3.07
134 135 1.542492 CTGCTTGTTCCTTGCCTCAT 58.458 50.000 0.00 0.00 0.00 2.90
135 136 0.538057 CCTGCTTGTTCCTTGCCTCA 60.538 55.000 0.00 0.00 0.00 3.86
136 137 0.538287 ACCTGCTTGTTCCTTGCCTC 60.538 55.000 0.00 0.00 0.00 4.70
137 138 0.825010 CACCTGCTTGTTCCTTGCCT 60.825 55.000 0.00 0.00 0.00 4.75
138 139 0.823356 TCACCTGCTTGTTCCTTGCC 60.823 55.000 0.00 0.00 0.00 4.52
139 140 0.595095 CTCACCTGCTTGTTCCTTGC 59.405 55.000 0.00 0.00 0.00 4.01
140 141 1.242076 CCTCACCTGCTTGTTCCTTG 58.758 55.000 0.00 0.00 0.00 3.61
141 142 0.846693 ACCTCACCTGCTTGTTCCTT 59.153 50.000 0.00 0.00 0.00 3.36
142 143 1.729586 TACCTCACCTGCTTGTTCCT 58.270 50.000 0.00 0.00 0.00 3.36
143 144 2.561478 TTACCTCACCTGCTTGTTCC 57.439 50.000 0.00 0.00 0.00 3.62
144 145 4.508124 CGATATTACCTCACCTGCTTGTTC 59.492 45.833 0.00 0.00 0.00 3.18
145 146 4.161565 TCGATATTACCTCACCTGCTTGTT 59.838 41.667 0.00 0.00 0.00 2.83
146 147 3.704566 TCGATATTACCTCACCTGCTTGT 59.295 43.478 0.00 0.00 0.00 3.16
147 148 4.051922 GTCGATATTACCTCACCTGCTTG 58.948 47.826 0.00 0.00 0.00 4.01
148 149 3.069729 GGTCGATATTACCTCACCTGCTT 59.930 47.826 0.00 0.00 33.97 3.91
149 150 2.628657 GGTCGATATTACCTCACCTGCT 59.371 50.000 0.00 0.00 33.97 4.24
150 151 2.607282 CGGTCGATATTACCTCACCTGC 60.607 54.545 0.00 0.00 34.66 4.85
151 152 2.882761 TCGGTCGATATTACCTCACCTG 59.117 50.000 0.00 0.00 34.66 4.00
152 153 2.883386 GTCGGTCGATATTACCTCACCT 59.117 50.000 0.00 0.00 34.66 4.00
153 154 2.620115 TGTCGGTCGATATTACCTCACC 59.380 50.000 0.00 0.00 34.66 4.02
154 155 3.065786 TGTGTCGGTCGATATTACCTCAC 59.934 47.826 16.84 16.84 38.64 3.51
155 156 3.065786 GTGTGTCGGTCGATATTACCTCA 59.934 47.826 0.00 3.89 34.66 3.86
156 157 3.549625 GGTGTGTCGGTCGATATTACCTC 60.550 52.174 14.27 1.91 34.66 3.85
157 158 2.360165 GGTGTGTCGGTCGATATTACCT 59.640 50.000 14.27 0.00 34.66 3.08
158 159 2.099592 TGGTGTGTCGGTCGATATTACC 59.900 50.000 14.50 14.50 0.00 2.85
159 160 3.425577 TGGTGTGTCGGTCGATATTAC 57.574 47.619 0.00 0.00 0.00 1.89
160 161 4.340097 AGAATGGTGTGTCGGTCGATATTA 59.660 41.667 0.00 0.00 0.00 0.98
161 162 3.132289 AGAATGGTGTGTCGGTCGATATT 59.868 43.478 0.00 0.00 0.00 1.28
162 163 2.693591 AGAATGGTGTGTCGGTCGATAT 59.306 45.455 0.00 0.00 0.00 1.63
163 164 2.097036 AGAATGGTGTGTCGGTCGATA 58.903 47.619 0.00 0.00 0.00 2.92
164 165 0.895530 AGAATGGTGTGTCGGTCGAT 59.104 50.000 0.00 0.00 0.00 3.59
165 166 1.536940 TAGAATGGTGTGTCGGTCGA 58.463 50.000 0.00 0.00 0.00 4.20
166 167 2.579207 ATAGAATGGTGTGTCGGTCG 57.421 50.000 0.00 0.00 0.00 4.79
167 168 4.117685 GGTAATAGAATGGTGTGTCGGTC 58.882 47.826 0.00 0.00 0.00 4.79
168 169 3.773119 AGGTAATAGAATGGTGTGTCGGT 59.227 43.478 0.00 0.00 0.00 4.69
169 170 4.402056 AGGTAATAGAATGGTGTGTCGG 57.598 45.455 0.00 0.00 0.00 4.79
170 171 6.802608 TCTTAGGTAATAGAATGGTGTGTCG 58.197 40.000 0.00 0.00 0.00 4.35
171 172 7.657761 CCATCTTAGGTAATAGAATGGTGTGTC 59.342 40.741 0.00 0.00 0.00 3.67
172 173 7.127339 ACCATCTTAGGTAATAGAATGGTGTGT 59.873 37.037 3.46 0.00 40.98 3.72
173 174 7.442364 CACCATCTTAGGTAATAGAATGGTGTG 59.558 40.741 18.80 0.54 40.77 3.82
174 175 7.127339 ACACCATCTTAGGTAATAGAATGGTGT 59.873 37.037 24.25 24.25 45.52 4.16
175 176 7.509546 ACACCATCTTAGGTAATAGAATGGTG 58.490 38.462 23.18 23.18 44.57 4.17
176 177 7.691993 ACACCATCTTAGGTAATAGAATGGT 57.308 36.000 0.00 0.00 40.77 3.55
185 186 9.017509 CCGTCTATATTACACCATCTTAGGTAA 57.982 37.037 0.00 0.00 40.77 2.85
186 187 7.613022 CCCGTCTATATTACACCATCTTAGGTA 59.387 40.741 0.00 0.00 40.77 3.08
187 188 6.436532 CCCGTCTATATTACACCATCTTAGGT 59.563 42.308 0.00 0.00 44.48 3.08
188 189 6.627508 GCCCGTCTATATTACACCATCTTAGG 60.628 46.154 0.00 0.00 0.00 2.69
189 190 6.331061 GCCCGTCTATATTACACCATCTTAG 58.669 44.000 0.00 0.00 0.00 2.18
190 191 5.186409 GGCCCGTCTATATTACACCATCTTA 59.814 44.000 0.00 0.00 0.00 2.10
191 192 4.020485 GGCCCGTCTATATTACACCATCTT 60.020 45.833 0.00 0.00 0.00 2.40
192 193 3.514309 GGCCCGTCTATATTACACCATCT 59.486 47.826 0.00 0.00 0.00 2.90
193 194 3.514309 AGGCCCGTCTATATTACACCATC 59.486 47.826 0.00 0.00 0.00 3.51
194 195 3.517612 AGGCCCGTCTATATTACACCAT 58.482 45.455 0.00 0.00 0.00 3.55
195 196 2.966915 AGGCCCGTCTATATTACACCA 58.033 47.619 0.00 0.00 0.00 4.17
196 197 4.525874 AGTTAGGCCCGTCTATATTACACC 59.474 45.833 0.00 0.00 0.00 4.16
197 198 5.718724 AGTTAGGCCCGTCTATATTACAC 57.281 43.478 0.00 0.00 0.00 2.90
198 199 7.287466 TGTTTAGTTAGGCCCGTCTATATTACA 59.713 37.037 0.00 0.45 0.00 2.41
199 200 7.596621 GTGTTTAGTTAGGCCCGTCTATATTAC 59.403 40.741 0.00 0.00 0.00 1.89
200 201 7.287466 TGTGTTTAGTTAGGCCCGTCTATATTA 59.713 37.037 0.00 0.00 0.00 0.98
201 202 6.098695 TGTGTTTAGTTAGGCCCGTCTATATT 59.901 38.462 0.00 0.00 0.00 1.28
202 203 5.599656 TGTGTTTAGTTAGGCCCGTCTATAT 59.400 40.000 0.00 0.00 0.00 0.86
203 204 4.955450 TGTGTTTAGTTAGGCCCGTCTATA 59.045 41.667 0.00 0.00 0.00 1.31
204 205 3.770933 TGTGTTTAGTTAGGCCCGTCTAT 59.229 43.478 0.00 0.00 0.00 1.98
205 206 3.164268 TGTGTTTAGTTAGGCCCGTCTA 58.836 45.455 0.00 0.00 0.00 2.59
206 207 1.972795 TGTGTTTAGTTAGGCCCGTCT 59.027 47.619 0.00 0.00 0.00 4.18
207 208 2.460757 TGTGTTTAGTTAGGCCCGTC 57.539 50.000 0.00 0.00 0.00 4.79
208 209 3.428413 AATGTGTTTAGTTAGGCCCGT 57.572 42.857 0.00 0.00 0.00 5.28
209 210 4.761975 TCTAATGTGTTTAGTTAGGCCCG 58.238 43.478 0.00 0.00 38.76 6.13
210 211 6.423001 CGTATCTAATGTGTTTAGTTAGGCCC 59.577 42.308 0.00 0.00 38.76 5.80
211 212 6.423001 CCGTATCTAATGTGTTTAGTTAGGCC 59.577 42.308 0.00 0.00 38.76 5.19
212 213 7.205297 TCCGTATCTAATGTGTTTAGTTAGGC 58.795 38.462 0.00 0.00 38.76 3.93
213 214 9.193133 CATCCGTATCTAATGTGTTTAGTTAGG 57.807 37.037 0.00 0.00 38.76 2.69
214 215 8.700644 GCATCCGTATCTAATGTGTTTAGTTAG 58.299 37.037 0.00 0.00 38.76 2.34
215 216 7.654520 GGCATCCGTATCTAATGTGTTTAGTTA 59.345 37.037 0.00 0.00 38.76 2.24
216 217 6.482308 GGCATCCGTATCTAATGTGTTTAGTT 59.518 38.462 0.00 0.00 38.76 2.24
217 218 5.989777 GGCATCCGTATCTAATGTGTTTAGT 59.010 40.000 0.00 0.00 38.76 2.24
218 219 6.223852 AGGCATCCGTATCTAATGTGTTTAG 58.776 40.000 0.00 0.00 38.98 1.85
219 220 6.169557 AGGCATCCGTATCTAATGTGTTTA 57.830 37.500 0.00 0.00 0.00 2.01
220 221 5.036117 AGGCATCCGTATCTAATGTGTTT 57.964 39.130 0.00 0.00 0.00 2.83
221 222 4.689612 AGGCATCCGTATCTAATGTGTT 57.310 40.909 0.00 0.00 0.00 3.32
222 223 7.661536 ATATAGGCATCCGTATCTAATGTGT 57.338 36.000 0.00 0.00 0.00 3.72
223 224 8.948631 AAATATAGGCATCCGTATCTAATGTG 57.051 34.615 0.00 0.00 0.00 3.21
224 225 7.921214 CGAAATATAGGCATCCGTATCTAATGT 59.079 37.037 0.00 0.00 0.00 2.71
225 226 7.382488 CCGAAATATAGGCATCCGTATCTAATG 59.618 40.741 0.00 0.00 0.00 1.90
226 227 7.069578 ACCGAAATATAGGCATCCGTATCTAAT 59.930 37.037 0.00 0.00 0.00 1.73
227 228 6.379133 ACCGAAATATAGGCATCCGTATCTAA 59.621 38.462 0.00 0.00 0.00 2.10
228 229 5.889853 ACCGAAATATAGGCATCCGTATCTA 59.110 40.000 0.00 0.00 0.00 1.98
229 230 4.710375 ACCGAAATATAGGCATCCGTATCT 59.290 41.667 0.00 0.00 0.00 1.98
230 231 5.007385 ACCGAAATATAGGCATCCGTATC 57.993 43.478 0.00 0.00 0.00 2.24
231 232 5.163478 GGTACCGAAATATAGGCATCCGTAT 60.163 44.000 0.00 0.00 0.00 3.06
232 233 4.158394 GGTACCGAAATATAGGCATCCGTA 59.842 45.833 0.00 0.00 0.00 4.02
233 234 3.056322 GGTACCGAAATATAGGCATCCGT 60.056 47.826 0.00 0.00 0.00 4.69
234 235 3.518590 GGTACCGAAATATAGGCATCCG 58.481 50.000 0.00 0.00 0.00 4.18
235 236 3.870274 GGGTACCGAAATATAGGCATCC 58.130 50.000 5.65 0.00 40.86 3.51
251 252 5.008019 CACAATAACTGCATCTGATGGGTAC 59.992 44.000 18.60 3.23 0.00 3.34
252 253 5.125356 CACAATAACTGCATCTGATGGGTA 58.875 41.667 18.60 6.91 0.00 3.69
253 254 3.949754 CACAATAACTGCATCTGATGGGT 59.050 43.478 18.60 4.88 0.00 4.51
254 255 3.317149 CCACAATAACTGCATCTGATGGG 59.683 47.826 18.60 4.16 0.00 4.00
255 256 3.949754 ACCACAATAACTGCATCTGATGG 59.050 43.478 18.60 6.12 0.00 3.51
256 257 4.732647 GCACCACAATAACTGCATCTGATG 60.733 45.833 13.26 13.26 0.00 3.07
257 258 3.379372 GCACCACAATAACTGCATCTGAT 59.621 43.478 0.00 0.00 0.00 2.90
258 259 2.749076 GCACCACAATAACTGCATCTGA 59.251 45.455 0.00 0.00 0.00 3.27
259 260 2.488937 TGCACCACAATAACTGCATCTG 59.511 45.455 0.00 0.00 34.73 2.90
265 266 4.880120 AGATCAGATGCACCACAATAACTG 59.120 41.667 0.00 0.00 0.00 3.16
276 277 2.160822 ACGCCATAGATCAGATGCAC 57.839 50.000 0.00 0.00 0.00 4.57
283 284 5.359576 AGCCAAAAATAAACGCCATAGATCA 59.640 36.000 0.00 0.00 0.00 2.92
284 285 5.831997 AGCCAAAAATAAACGCCATAGATC 58.168 37.500 0.00 0.00 0.00 2.75
289 1228 6.227522 AGTTTTAGCCAAAAATAAACGCCAT 58.772 32.000 0.00 0.00 39.22 4.40
291 1230 6.422701 AGAAGTTTTAGCCAAAAATAAACGCC 59.577 34.615 0.00 0.00 39.22 5.68
304 1243 6.209361 CACCTTTTCTCAAGAAGTTTTAGCC 58.791 40.000 0.00 0.00 35.21 3.93
307 1246 7.283807 GGTACCACCTTTTCTCAAGAAGTTTTA 59.716 37.037 7.15 0.00 34.73 1.52
341 1280 1.523938 GAGACCTTATGCGGTGGCC 60.524 63.158 0.00 0.00 37.42 5.36
343 1282 0.249073 CTCGAGACCTTATGCGGTGG 60.249 60.000 6.58 0.00 37.42 4.61
366 1305 3.624900 CGGCATCAAGAAGCATGTTATG 58.375 45.455 0.00 0.00 0.00 1.90
367 1306 2.033801 GCGGCATCAAGAAGCATGTTAT 59.966 45.455 0.00 0.00 0.00 1.89
394 1364 3.386768 TGTCTTTCTTCACTTCCTCGG 57.613 47.619 0.00 0.00 0.00 4.63
406 1376 2.887152 AGCGGCAGAATTTTGTCTTTCT 59.113 40.909 1.45 0.00 32.48 2.52
411 1381 2.729378 GCAGCGGCAGAATTTTGTC 58.271 52.632 3.18 0.00 40.72 3.18
425 1395 0.320374 TATAGGTACGCCCATGCAGC 59.680 55.000 0.00 0.00 37.32 5.25
446 1416 2.223900 TGATCATCTTAGCCAGAGCACG 60.224 50.000 0.00 0.00 43.56 5.34
462 1432 2.373224 TGTGCCACACAAGTTTGATCA 58.627 42.857 0.00 0.00 41.69 2.92
480 1452 4.819105 TTCCCTTCGTCTACATTCATGT 57.181 40.909 0.00 0.00 44.48 3.21
493 1465 6.594159 GGTCCATATATACATGTTTCCCTTCG 59.406 42.308 2.30 0.00 0.00 3.79
503 1475 9.755804 CTGCTACTAATGGTCCATATATACATG 57.244 37.037 4.33 0.00 0.00 3.21
514 1486 2.356069 GCTTTGCTGCTACTAATGGTCC 59.644 50.000 0.00 0.00 0.00 4.46
529 1504 6.246420 TCTCATACTCTTTTCTTGCTTTGC 57.754 37.500 0.00 0.00 0.00 3.68
531 1506 5.121454 CGCTCTCATACTCTTTTCTTGCTTT 59.879 40.000 0.00 0.00 0.00 3.51
535 1510 4.499183 ACCGCTCTCATACTCTTTTCTTG 58.501 43.478 0.00 0.00 0.00 3.02
537 1512 4.339814 CCTACCGCTCTCATACTCTTTTCT 59.660 45.833 0.00 0.00 0.00 2.52
538 1513 4.612943 CCTACCGCTCTCATACTCTTTTC 58.387 47.826 0.00 0.00 0.00 2.29
539 1514 3.181474 GCCTACCGCTCTCATACTCTTTT 60.181 47.826 0.00 0.00 0.00 2.27
540 1515 2.362717 GCCTACCGCTCTCATACTCTTT 59.637 50.000 0.00 0.00 0.00 2.52
541 1516 1.957877 GCCTACCGCTCTCATACTCTT 59.042 52.381 0.00 0.00 0.00 2.85
542 1517 1.611519 GCCTACCGCTCTCATACTCT 58.388 55.000 0.00 0.00 0.00 3.24
543 1518 0.599060 GGCCTACCGCTCTCATACTC 59.401 60.000 0.00 0.00 37.74 2.59
544 1519 0.106167 TGGCCTACCGCTCTCATACT 60.106 55.000 3.32 0.00 39.70 2.12
547 1522 2.136878 CCTGGCCTACCGCTCTCAT 61.137 63.158 3.32 0.00 39.70 2.90
558 3972 0.191314 GTCCCTACTATCCCTGGCCT 59.809 60.000 3.32 0.00 0.00 5.19
561 3975 0.178958 AGCGTCCCTACTATCCCTGG 60.179 60.000 0.00 0.00 0.00 4.45
571 3985 1.214673 ACTACTCCATCAGCGTCCCTA 59.785 52.381 0.00 0.00 0.00 3.53
603 4017 2.603473 TACTCCACCAGCGCACCT 60.603 61.111 11.47 0.00 0.00 4.00
604 4018 2.125512 CTACTCCACCAGCGCACC 60.126 66.667 11.47 0.00 0.00 5.01
613 4027 3.071167 AGTCACCTTCCAAACTACTCCAC 59.929 47.826 0.00 0.00 0.00 4.02
640 4054 2.663826 TAAAATGCCCAAATGCGTCC 57.336 45.000 0.00 0.00 0.00 4.79
690 4104 1.091537 CGTTGGTCACGCCCATTTAT 58.908 50.000 0.00 0.00 43.37 1.40
720 4286 3.443681 AGTTTTGTTTCTCATATGGCCCG 59.556 43.478 0.00 0.00 0.00 6.13
727 4293 5.894393 TGGTTGGGAAGTTTTGTTTCTCATA 59.106 36.000 0.00 0.00 35.14 2.15
750 4316 0.800683 TGCGATTCGTAACTCGGCTG 60.801 55.000 8.03 0.00 40.32 4.85
831 4397 1.079127 AATCTGGACCGGCTGTTCG 60.079 57.895 0.00 0.00 0.00 3.95
832 4398 1.084370 CGAATCTGGACCGGCTGTTC 61.084 60.000 0.00 0.00 0.00 3.18
838 4404 1.736586 CTCCTCGAATCTGGACCGG 59.263 63.158 0.00 0.00 0.00 5.28
900 4506 3.323403 TGTTAGGCTTTGTTGGGATTTGG 59.677 43.478 0.00 0.00 0.00 3.28
915 4521 1.146358 CGCTCCGCTACTTGTTAGGC 61.146 60.000 0.00 0.00 0.00 3.93
921 4527 0.658829 CTCGATCGCTCCGCTACTTG 60.659 60.000 11.09 0.00 0.00 3.16
1037 4652 4.043100 TGCTGCAGCAGGGATGCT 62.043 61.111 36.78 0.00 45.80 3.79
1568 5202 2.398554 CCATCTCGTTTGGCCACGG 61.399 63.158 3.88 1.16 40.74 4.94
1615 5249 1.355066 CCGGAGAGAAAGAAGCGCAC 61.355 60.000 11.47 2.78 0.00 5.34
1651 5290 6.293027 GGACAAATTTTGGTTGCAATTCTGAG 60.293 38.462 13.42 0.00 34.12 3.35
1811 5452 3.643978 GCCATGCATCGTCTCGCC 61.644 66.667 0.00 0.00 0.00 5.54
1878 5520 6.319141 ACAATTACTCCACAAAGAAAGCTC 57.681 37.500 0.00 0.00 0.00 4.09
2040 5696 5.839606 TCATCTTCATCCTCACTCTCATCAT 59.160 40.000 0.00 0.00 0.00 2.45
2129 5785 9.542462 TCAAAATATTTCTCTAACCCGTATGAG 57.458 33.333 0.10 0.00 0.00 2.90
2173 5829 4.083802 AGTGTTTCAATTTCTCTAGCACGC 60.084 41.667 0.00 0.00 0.00 5.34
2216 5873 8.329203 ACTCTATCAACAAAAACCTCAGAATC 57.671 34.615 0.00 0.00 0.00 2.52
2224 5881 9.744468 ACAATGTTTACTCTATCAACAAAAACC 57.256 29.630 0.00 0.00 34.19 3.27
2238 5895 6.634436 CACTTGCTGAAGAACAATGTTTACTC 59.366 38.462 0.00 0.00 32.98 2.59
2279 5937 9.882996 CAACAAAATATGCGTTAGATATGATGT 57.117 29.630 0.00 0.00 0.00 3.06
2305 5963 0.182775 ACTTTCGGGGGCACATATCC 59.817 55.000 0.00 0.00 0.00 2.59
2318 5976 9.831737 AAATGATCATTTCTTTGACTACTTTCG 57.168 29.630 24.83 0.00 36.34 3.46
2368 6026 1.594293 GTCATATGTGCGGGACCGG 60.594 63.158 13.21 0.00 40.19 5.28
2379 6041 2.545106 TGCAGTAGCGCAATGTCATATG 59.455 45.455 11.47 0.00 46.23 1.78
2388 6050 0.586319 GTTGAACTGCAGTAGCGCAA 59.414 50.000 22.01 18.10 46.23 4.85
2412 6074 1.903404 GGGTCCAACAAGCTGTGGG 60.903 63.158 10.58 7.30 43.01 4.61
2416 6078 1.303643 GAGGGGGTCCAACAAGCTG 60.304 63.158 0.00 0.00 34.83 4.24
2425 6087 0.185175 GAGAGAGAGAGAGGGGGTCC 59.815 65.000 0.00 0.00 0.00 4.46
2430 6092 0.108585 CGGGAGAGAGAGAGAGAGGG 59.891 65.000 0.00 0.00 0.00 4.30
2431 6093 0.837272 ACGGGAGAGAGAGAGAGAGG 59.163 60.000 0.00 0.00 0.00 3.69
2432 6094 1.475034 CCACGGGAGAGAGAGAGAGAG 60.475 61.905 0.00 0.00 0.00 3.20
2433 6095 0.544223 CCACGGGAGAGAGAGAGAGA 59.456 60.000 0.00 0.00 0.00 3.10
2434 6096 0.544223 TCCACGGGAGAGAGAGAGAG 59.456 60.000 0.00 0.00 0.00 3.20
2435 6097 1.217916 ATCCACGGGAGAGAGAGAGA 58.782 55.000 0.00 0.00 34.05 3.10
2440 6102 1.410882 GGAGAAATCCACGGGAGAGAG 59.589 57.143 0.00 0.00 34.05 3.20
2449 6111 3.304794 CGATAGAGGACGGAGAAATCCAC 60.305 52.174 0.00 0.00 37.47 4.02
2450 6112 2.885266 CGATAGAGGACGGAGAAATCCA 59.115 50.000 0.00 0.00 37.47 3.41
2513 6397 3.131933 AGAAGCTACTCATTGACGATGCT 59.868 43.478 0.00 0.00 35.64 3.79
2514 6398 3.244814 CAGAAGCTACTCATTGACGATGC 59.755 47.826 0.00 0.00 35.64 3.91
2524 6408 0.243907 GACCACGCAGAAGCTACTCA 59.756 55.000 0.00 0.00 39.10 3.41
2565 7522 3.405831 CCTTCTCTCATTCTTGTGCACA 58.594 45.455 17.42 17.42 0.00 4.57
2582 7539 1.760192 ATCCATGACTGCAAGCCTTC 58.240 50.000 0.00 0.00 37.60 3.46
2591 7548 3.019564 GGGTTTCCTGAATCCATGACTG 58.980 50.000 8.76 0.00 33.00 3.51
2622 7609 4.021280 TCACATGTGCCATTTAAGTGCATT 60.021 37.500 21.38 0.00 37.34 3.56
2742 7729 9.612066 TGTTCAACTACATAGCAATGAATATGA 57.388 29.630 11.27 0.00 36.54 2.15
2747 7734 9.612066 TCATATGTTCAACTACATAGCAATGAA 57.388 29.630 1.90 0.00 42.49 2.57
2748 7735 9.612066 TTCATATGTTCAACTACATAGCAATGA 57.388 29.630 1.90 0.00 42.49 2.57
2751 7738 9.612066 TCATTCATATGTTCAACTACATAGCAA 57.388 29.630 1.90 0.00 42.49 3.91
2752 7739 9.045223 GTCATTCATATGTTCAACTACATAGCA 57.955 33.333 1.90 0.00 42.49 3.49
2753 7740 8.217115 CGTCATTCATATGTTCAACTACATAGC 58.783 37.037 1.90 0.00 42.49 2.97
2754 7741 9.463443 TCGTCATTCATATGTTCAACTACATAG 57.537 33.333 1.90 0.00 42.49 2.23
2755 7742 9.981114 ATCGTCATTCATATGTTCAACTACATA 57.019 29.630 1.90 0.00 43.15 2.29
2756 7743 8.893219 ATCGTCATTCATATGTTCAACTACAT 57.107 30.769 1.90 0.00 41.43 2.29
2757 7744 8.716646 AATCGTCATTCATATGTTCAACTACA 57.283 30.769 1.90 0.00 33.34 2.74
2758 7745 8.817100 TGAATCGTCATTCATATGTTCAACTAC 58.183 33.333 1.90 0.00 42.99 2.73
2759 7746 8.940768 TGAATCGTCATTCATATGTTCAACTA 57.059 30.769 1.90 0.00 42.99 2.24
2760 7747 7.848223 TGAATCGTCATTCATATGTTCAACT 57.152 32.000 1.90 0.00 42.99 3.16
2772 7759 6.492007 AGCCATGAATATGAATCGTCATTC 57.508 37.500 0.00 0.00 42.03 2.67
2773 7760 7.609146 ACATAGCCATGAATATGAATCGTCATT 59.391 33.333 18.48 0.00 39.26 2.57
2774 7761 7.108194 ACATAGCCATGAATATGAATCGTCAT 58.892 34.615 18.48 0.00 40.41 3.06
2775 7762 6.466812 ACATAGCCATGAATATGAATCGTCA 58.533 36.000 18.48 0.00 36.36 4.35
2776 7763 6.974932 ACATAGCCATGAATATGAATCGTC 57.025 37.500 18.48 0.00 36.36 4.20
2777 7764 7.547019 CACTACATAGCCATGAATATGAATCGT 59.453 37.037 18.48 9.75 36.36 3.73
2778 7765 7.761249 TCACTACATAGCCATGAATATGAATCG 59.239 37.037 18.48 9.33 36.36 3.34
2779 7766 9.440773 TTCACTACATAGCCATGAATATGAATC 57.559 33.333 18.48 0.00 36.36 2.52
2780 7767 9.224267 GTTCACTACATAGCCATGAATATGAAT 57.776 33.333 18.48 5.37 36.36 2.57
2781 7768 8.210265 TGTTCACTACATAGCCATGAATATGAA 58.790 33.333 18.48 1.19 36.36 2.57
2782 7769 7.734942 TGTTCACTACATAGCCATGAATATGA 58.265 34.615 18.48 0.00 36.36 2.15
2783 7770 7.967890 TGTTCACTACATAGCCATGAATATG 57.032 36.000 0.00 12.83 35.96 1.78
2797 7784 7.337938 ACCATGTCATTCATATGTTCACTACA 58.662 34.615 1.90 2.33 36.47 2.74
2798 7785 7.792374 ACCATGTCATTCATATGTTCACTAC 57.208 36.000 1.90 0.00 34.67 2.73
2799 7786 8.267183 AGAACCATGTCATTCATATGTTCACTA 58.733 33.333 1.90 0.00 42.91 2.74
2800 7787 7.114754 AGAACCATGTCATTCATATGTTCACT 58.885 34.615 1.90 0.00 42.91 3.41
2801 7788 7.325660 AGAACCATGTCATTCATATGTTCAC 57.674 36.000 1.90 0.00 42.91 3.18
2802 7789 7.227314 GCTAGAACCATGTCATTCATATGTTCA 59.773 37.037 1.90 0.00 42.91 3.18
2803 7790 7.443575 AGCTAGAACCATGTCATTCATATGTTC 59.556 37.037 1.90 11.16 41.98 3.18
2804 7791 7.285566 AGCTAGAACCATGTCATTCATATGTT 58.714 34.615 1.90 0.00 35.13 2.71
2805 7792 6.835174 AGCTAGAACCATGTCATTCATATGT 58.165 36.000 1.90 0.00 34.67 2.29
2806 7793 7.064371 GCTAGCTAGAACCATGTCATTCATATG 59.936 40.741 25.15 0.00 34.67 1.78
2807 7794 7.102346 GCTAGCTAGAACCATGTCATTCATAT 58.898 38.462 25.15 0.00 34.67 1.78
2808 7795 6.459066 GCTAGCTAGAACCATGTCATTCATA 58.541 40.000 25.15 0.00 34.67 2.15
2809 7796 5.303971 GCTAGCTAGAACCATGTCATTCAT 58.696 41.667 25.15 0.00 37.22 2.57
2810 7797 4.443457 GGCTAGCTAGAACCATGTCATTCA 60.443 45.833 25.15 0.00 0.00 2.57
2811 7798 4.061596 GGCTAGCTAGAACCATGTCATTC 58.938 47.826 25.15 1.40 0.00 2.67
2885 7875 7.147567 TGTGCATCCAAGGTGTATATTAGAAGA 60.148 37.037 0.00 0.00 0.00 2.87
2896 7886 1.250328 CACATGTGCATCCAAGGTGT 58.750 50.000 13.94 0.00 0.00 4.16
2897 7887 0.528924 CCACATGTGCATCCAAGGTG 59.471 55.000 20.81 0.00 0.00 4.00
2898 7888 0.405198 TCCACATGTGCATCCAAGGT 59.595 50.000 20.81 0.00 0.00 3.50
2899 7889 0.813184 GTCCACATGTGCATCCAAGG 59.187 55.000 20.81 4.22 0.00 3.61
2900 7890 0.448990 CGTCCACATGTGCATCCAAG 59.551 55.000 20.81 5.01 0.00 3.61
2901 7891 0.036022 TCGTCCACATGTGCATCCAA 59.964 50.000 20.81 0.27 0.00 3.53
2902 7892 0.252761 ATCGTCCACATGTGCATCCA 59.747 50.000 20.81 2.90 0.00 3.41
2903 7893 1.867233 GTATCGTCCACATGTGCATCC 59.133 52.381 20.81 6.30 0.00 3.51
2904 7894 2.541346 CTGTATCGTCCACATGTGCATC 59.459 50.000 20.81 11.00 0.00 3.91
2905 7895 2.168313 TCTGTATCGTCCACATGTGCAT 59.832 45.455 20.81 10.92 0.00 3.96
2906 7896 1.548269 TCTGTATCGTCCACATGTGCA 59.452 47.619 20.81 1.77 0.00 4.57
2907 7897 2.293677 TCTGTATCGTCCACATGTGC 57.706 50.000 20.81 6.86 0.00 4.57
2908 7898 3.618594 CCTTTCTGTATCGTCCACATGTG 59.381 47.826 19.31 19.31 0.00 3.21
2909 7899 3.861840 CCTTTCTGTATCGTCCACATGT 58.138 45.455 0.00 0.00 0.00 3.21
2910 7900 2.609459 GCCTTTCTGTATCGTCCACATG 59.391 50.000 0.00 0.00 0.00 3.21
2911 7901 2.236146 TGCCTTTCTGTATCGTCCACAT 59.764 45.455 0.00 0.00 0.00 3.21
2912 7902 1.621317 TGCCTTTCTGTATCGTCCACA 59.379 47.619 0.00 0.00 0.00 4.17
2913 7903 2.000447 GTGCCTTTCTGTATCGTCCAC 59.000 52.381 0.00 0.00 0.00 4.02
2914 7904 1.899814 AGTGCCTTTCTGTATCGTCCA 59.100 47.619 0.00 0.00 0.00 4.02
2915 7905 2.674796 AGTGCCTTTCTGTATCGTCC 57.325 50.000 0.00 0.00 0.00 4.79
2916 7906 3.060895 CGAAAGTGCCTTTCTGTATCGTC 59.939 47.826 19.11 0.00 45.19 4.20
2917 7907 2.993899 CGAAAGTGCCTTTCTGTATCGT 59.006 45.455 19.11 0.00 45.19 3.73
2918 7908 2.222819 GCGAAAGTGCCTTTCTGTATCG 60.223 50.000 19.11 10.88 45.19 2.92
2919 7909 2.742053 TGCGAAAGTGCCTTTCTGTATC 59.258 45.455 19.11 8.59 45.19 2.24
2920 7910 2.484264 GTGCGAAAGTGCCTTTCTGTAT 59.516 45.455 19.11 0.00 45.19 2.29
2921 7911 1.871039 GTGCGAAAGTGCCTTTCTGTA 59.129 47.619 19.11 12.39 45.19 2.74
2922 7912 0.663153 GTGCGAAAGTGCCTTTCTGT 59.337 50.000 19.11 0.00 45.19 3.41
2923 7913 0.040067 GGTGCGAAAGTGCCTTTCTG 60.040 55.000 19.11 14.97 45.19 3.02
2924 7914 0.179018 AGGTGCGAAAGTGCCTTTCT 60.179 50.000 19.11 4.32 45.19 2.52
2925 7915 0.238553 GAGGTGCGAAAGTGCCTTTC 59.761 55.000 14.28 14.28 44.29 2.62
2926 7916 0.179018 AGAGGTGCGAAAGTGCCTTT 60.179 50.000 0.46 0.46 37.45 3.11
2927 7917 0.685097 TAGAGGTGCGAAAGTGCCTT 59.315 50.000 0.00 0.00 37.45 4.35
2928 7918 0.905357 ATAGAGGTGCGAAAGTGCCT 59.095 50.000 0.00 0.00 39.38 4.75
2929 7919 1.666189 GAATAGAGGTGCGAAAGTGCC 59.334 52.381 0.00 0.00 0.00 5.01
2930 7920 2.349886 CAGAATAGAGGTGCGAAAGTGC 59.650 50.000 0.00 0.00 0.00 4.40
2931 7921 2.349886 GCAGAATAGAGGTGCGAAAGTG 59.650 50.000 0.00 0.00 0.00 3.16
2932 7922 2.234908 AGCAGAATAGAGGTGCGAAAGT 59.765 45.455 0.00 0.00 42.26 2.66
2933 7923 2.606725 CAGCAGAATAGAGGTGCGAAAG 59.393 50.000 0.00 0.00 42.26 2.62
2934 7924 2.233676 TCAGCAGAATAGAGGTGCGAAA 59.766 45.455 0.00 0.00 42.26 3.46
2935 7925 1.824852 TCAGCAGAATAGAGGTGCGAA 59.175 47.619 0.00 0.00 42.26 4.70
2936 7926 1.474330 TCAGCAGAATAGAGGTGCGA 58.526 50.000 0.00 0.00 42.26 5.10
2937 7927 2.200067 CTTCAGCAGAATAGAGGTGCG 58.800 52.381 0.00 0.00 42.26 5.34
2938 7928 2.169352 TCCTTCAGCAGAATAGAGGTGC 59.831 50.000 0.00 0.00 37.48 5.01
2939 7929 4.057406 CTCCTTCAGCAGAATAGAGGTG 57.943 50.000 9.79 0.00 33.58 4.00
2952 7942 3.370366 CAGAATCGTCAAAGCTCCTTCAG 59.630 47.826 0.00 0.00 0.00 3.02
2953 7943 3.006859 TCAGAATCGTCAAAGCTCCTTCA 59.993 43.478 0.00 0.00 0.00 3.02
2954 7944 3.589988 TCAGAATCGTCAAAGCTCCTTC 58.410 45.455 0.00 0.00 0.00 3.46
2955 7945 3.685139 TCAGAATCGTCAAAGCTCCTT 57.315 42.857 0.00 0.00 0.00 3.36
2956 7946 3.902881 ATCAGAATCGTCAAAGCTCCT 57.097 42.857 0.00 0.00 0.00 3.69
2957 7947 3.492756 GCTATCAGAATCGTCAAAGCTCC 59.507 47.826 0.00 0.00 0.00 4.70
2958 7948 3.492756 GGCTATCAGAATCGTCAAAGCTC 59.507 47.826 0.00 0.00 0.00 4.09
2959 7949 3.118629 TGGCTATCAGAATCGTCAAAGCT 60.119 43.478 0.00 0.00 0.00 3.74
2960 7950 3.001736 GTGGCTATCAGAATCGTCAAAGC 59.998 47.826 0.00 0.00 0.00 3.51
2961 7951 3.557595 GGTGGCTATCAGAATCGTCAAAG 59.442 47.826 0.00 0.00 0.00 2.77
2962 7952 3.197766 AGGTGGCTATCAGAATCGTCAAA 59.802 43.478 0.00 0.00 0.00 2.69
2963 7953 2.766263 AGGTGGCTATCAGAATCGTCAA 59.234 45.455 0.00 0.00 0.00 3.18
2964 7954 2.388735 AGGTGGCTATCAGAATCGTCA 58.611 47.619 0.00 0.00 0.00 4.35
2965 7955 3.460857 AAGGTGGCTATCAGAATCGTC 57.539 47.619 0.00 0.00 0.00 4.20
2966 7956 3.914426 AAAGGTGGCTATCAGAATCGT 57.086 42.857 0.00 0.00 0.00 3.73
2967 7957 4.035675 GGAAAAAGGTGGCTATCAGAATCG 59.964 45.833 0.00 0.00 0.00 3.34
2968 7958 5.196695 AGGAAAAAGGTGGCTATCAGAATC 58.803 41.667 0.00 0.00 0.00 2.52
2969 7959 5.198602 AGGAAAAAGGTGGCTATCAGAAT 57.801 39.130 0.00 0.00 0.00 2.40
2970 7960 4.657814 AGGAAAAAGGTGGCTATCAGAA 57.342 40.909 0.00 0.00 0.00 3.02
2971 7961 5.772393 TTAGGAAAAAGGTGGCTATCAGA 57.228 39.130 0.00 0.00 0.00 3.27
2972 7962 8.697507 AATATTAGGAAAAAGGTGGCTATCAG 57.302 34.615 0.00 0.00 0.00 2.90
3015 8005 9.717942 CCAAGGTGAAATTAATTTATCACCAAA 57.282 29.630 33.54 8.76 42.52 3.28
3016 8006 9.094578 TCCAAGGTGAAATTAATTTATCACCAA 57.905 29.630 33.54 21.65 42.52 3.67
3017 8007 8.657387 TCCAAGGTGAAATTAATTTATCACCA 57.343 30.769 33.54 20.81 42.52 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.