Multiple sequence alignment - TraesCS5D01G419600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G419600 chr5D 100.000 2816 0 0 1 2816 480554909 480557724 0.000000e+00 5201.0
1 TraesCS5D01G419600 chr5D 83.849 1325 142 24 455 1760 480499803 480501074 0.000000e+00 1195.0
2 TraesCS5D01G419600 chr5D 79.310 174 34 2 1616 1788 408326031 408326203 1.370000e-23 121.0
3 TraesCS5D01G419600 chr5B 92.414 1516 90 9 441 1951 588920917 588922412 0.000000e+00 2139.0
4 TraesCS5D01G419600 chr5B 88.097 1445 128 25 459 1876 588913735 588915162 0.000000e+00 1676.0
5 TraesCS5D01G419600 chr5B 84.076 314 47 1 455 768 588882272 588882582 1.640000e-77 300.0
6 TraesCS5D01G419600 chr3D 93.608 704 45 0 2113 2816 9459702 9458999 0.000000e+00 1051.0
7 TraesCS5D01G419600 chr3D 93.447 702 43 2 2113 2813 573450875 573450176 0.000000e+00 1038.0
8 TraesCS5D01G419600 chr6A 93.581 701 45 0 2113 2813 558154957 558155657 0.000000e+00 1046.0
9 TraesCS5D01G419600 chr3B 93.466 704 46 0 2113 2816 752147340 752146637 0.000000e+00 1046.0
10 TraesCS5D01G419600 chr3B 74.085 355 71 14 1456 1804 800958610 800958271 2.940000e-25 126.0
11 TraesCS5D01G419600 chr3B 79.268 164 27 6 282 442 416286876 416286717 1.070000e-19 108.0
12 TraesCS5D01G419600 chrUn 93.314 703 45 2 2112 2813 47640706 47641407 0.000000e+00 1037.0
13 TraesCS5D01G419600 chr4D 93.295 701 47 0 2113 2813 306402579 306401879 0.000000e+00 1035.0
14 TraesCS5D01G419600 chr1D 93.295 701 47 0 2113 2813 56516143 56516843 0.000000e+00 1035.0
15 TraesCS5D01G419600 chr1D 98.423 444 7 0 1 444 250590192 250589749 0.000000e+00 782.0
16 TraesCS5D01G419600 chr1D 97.059 34 1 0 1273 1306 468249797 468249830 1.090000e-04 58.4
17 TraesCS5D01G419600 chr1B 93.182 704 47 1 2113 2816 4080431 4079729 0.000000e+00 1033.0
18 TraesCS5D01G419600 chr1B 97.059 34 1 0 1273 1306 646914063 646914096 1.090000e-04 58.4
19 TraesCS5D01G419600 chr7B 93.153 701 48 0 2113 2813 692867401 692868101 0.000000e+00 1029.0
20 TraesCS5D01G419600 chr7B 79.688 128 19 7 1115 1238 3695752 3695628 5.000000e-13 86.1
21 TraesCS5D01G419600 chr5A 84.371 883 81 26 441 1295 599642961 599643814 0.000000e+00 813.0
22 TraesCS5D01G419600 chr5A 84.349 607 70 15 1287 1876 599643996 599644594 3.150000e-159 571.0
23 TraesCS5D01G419600 chr5A 80.120 166 24 8 282 443 599336999 599337159 6.370000e-22 115.0
24 TraesCS5D01G419600 chr7D 97.968 443 9 0 1 443 551800761 551800319 0.000000e+00 769.0
25 TraesCS5D01G419600 chr7D 97.124 452 13 0 1 452 151789184 151789635 0.000000e+00 763.0
26 TraesCS5D01G419600 chr7D 96.487 427 15 0 1 427 151406175 151406601 0.000000e+00 706.0
27 TraesCS5D01G419600 chr7D 95.034 443 8 1 1 443 637221672 637221244 0.000000e+00 684.0
28 TraesCS5D01G419600 chr7D 74.910 279 41 24 1115 1384 63377716 63377458 1.780000e-17 100.0
29 TraesCS5D01G419600 chr6B 96.396 111 3 1 333 443 713046645 713046754 6.200000e-42 182.0
30 TraesCS5D01G419600 chr3A 80.000 165 26 6 282 443 580459502 580459342 6.370000e-22 115.0
31 TraesCS5D01G419600 chr7A 75.185 270 37 25 1125 1384 66166685 66166436 1.780000e-17 100.0
32 TraesCS5D01G419600 chr4B 100.000 28 0 0 1332 1359 95447045 95447018 5.000000e-03 52.8
33 TraesCS5D01G419600 chr2A 83.636 55 9 0 1613 1667 143373332 143373386 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G419600 chr5D 480554909 480557724 2815 False 5201 5201 100.000 1 2816 1 chr5D.!!$F3 2815
1 TraesCS5D01G419600 chr5D 480499803 480501074 1271 False 1195 1195 83.849 455 1760 1 chr5D.!!$F2 1305
2 TraesCS5D01G419600 chr5B 588920917 588922412 1495 False 2139 2139 92.414 441 1951 1 chr5B.!!$F3 1510
3 TraesCS5D01G419600 chr5B 588913735 588915162 1427 False 1676 1676 88.097 459 1876 1 chr5B.!!$F2 1417
4 TraesCS5D01G419600 chr3D 9458999 9459702 703 True 1051 1051 93.608 2113 2816 1 chr3D.!!$R1 703
5 TraesCS5D01G419600 chr3D 573450176 573450875 699 True 1038 1038 93.447 2113 2813 1 chr3D.!!$R2 700
6 TraesCS5D01G419600 chr6A 558154957 558155657 700 False 1046 1046 93.581 2113 2813 1 chr6A.!!$F1 700
7 TraesCS5D01G419600 chr3B 752146637 752147340 703 True 1046 1046 93.466 2113 2816 1 chr3B.!!$R2 703
8 TraesCS5D01G419600 chrUn 47640706 47641407 701 False 1037 1037 93.314 2112 2813 1 chrUn.!!$F1 701
9 TraesCS5D01G419600 chr4D 306401879 306402579 700 True 1035 1035 93.295 2113 2813 1 chr4D.!!$R1 700
10 TraesCS5D01G419600 chr1D 56516143 56516843 700 False 1035 1035 93.295 2113 2813 1 chr1D.!!$F1 700
11 TraesCS5D01G419600 chr1B 4079729 4080431 702 True 1033 1033 93.182 2113 2816 1 chr1B.!!$R1 703
12 TraesCS5D01G419600 chr7B 692867401 692868101 700 False 1029 1029 93.153 2113 2813 1 chr7B.!!$F1 700
13 TraesCS5D01G419600 chr5A 599642961 599644594 1633 False 692 813 84.360 441 1876 2 chr5A.!!$F2 1435

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
202 203 0.0293 CAAGGTTGTTCGGTGTGCAG 59.971 55.0 0.0 0.0 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2141 2400 0.036388 TTGCTTGGTCCTCGGATGAC 60.036 55.0 5.01 5.01 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 5.464168 TGATCATGTCATATCTGTGCTACG 58.536 41.667 0.00 0.00 0.00 3.51
52 53 4.918810 TCATGTCATATCTGTGCTACGT 57.081 40.909 0.00 0.00 0.00 3.57
53 54 4.860072 TCATGTCATATCTGTGCTACGTC 58.140 43.478 0.00 0.00 0.00 4.34
54 55 4.580580 TCATGTCATATCTGTGCTACGTCT 59.419 41.667 0.00 0.00 0.00 4.18
55 56 4.292977 TGTCATATCTGTGCTACGTCTG 57.707 45.455 0.00 0.00 0.00 3.51
56 57 3.046390 GTCATATCTGTGCTACGTCTGC 58.954 50.000 0.00 0.00 0.00 4.26
57 58 2.687935 TCATATCTGTGCTACGTCTGCA 59.312 45.455 11.39 11.39 38.19 4.41
58 59 2.851805 TATCTGTGCTACGTCTGCAG 57.148 50.000 15.06 7.63 41.41 4.41
59 60 0.459237 ATCTGTGCTACGTCTGCAGC 60.459 55.000 9.47 8.61 41.41 5.25
60 61 2.430751 TGTGCTACGTCTGCAGCG 60.431 61.111 22.98 22.98 41.41 5.18
61 62 2.430921 GTGCTACGTCTGCAGCGT 60.431 61.111 29.37 29.37 45.11 5.07
62 63 2.430751 TGCTACGTCTGCAGCGTG 60.431 61.111 32.15 24.82 42.87 5.34
63 64 3.843240 GCTACGTCTGCAGCGTGC 61.843 66.667 32.15 28.22 45.29 5.34
64 65 2.126307 CTACGTCTGCAGCGTGCT 60.126 61.111 32.15 17.07 45.31 4.40
65 66 2.430751 TACGTCTGCAGCGTGCTG 60.431 61.111 32.15 17.29 45.31 4.41
66 67 3.207547 TACGTCTGCAGCGTGCTGT 62.208 57.895 32.15 17.25 45.31 4.40
67 68 2.693250 TACGTCTGCAGCGTGCTGTT 62.693 55.000 32.15 15.99 45.31 3.16
68 69 2.021584 CGTCTGCAGCGTGCTGTTA 61.022 57.895 21.76 11.29 45.31 2.41
69 70 1.354337 CGTCTGCAGCGTGCTGTTAT 61.354 55.000 21.76 0.00 45.31 1.89
70 71 1.640428 GTCTGCAGCGTGCTGTTATA 58.360 50.000 21.76 6.84 45.31 0.98
71 72 2.205074 GTCTGCAGCGTGCTGTTATAT 58.795 47.619 21.76 0.00 45.31 0.86
72 73 2.609459 GTCTGCAGCGTGCTGTTATATT 59.391 45.455 21.76 0.00 45.31 1.28
73 74 3.063997 GTCTGCAGCGTGCTGTTATATTT 59.936 43.478 21.76 0.00 45.31 1.40
74 75 3.063861 TCTGCAGCGTGCTGTTATATTTG 59.936 43.478 21.76 5.34 45.31 2.32
75 76 2.097304 TGCAGCGTGCTGTTATATTTGG 59.903 45.455 21.76 0.00 45.31 3.28
76 77 2.097466 GCAGCGTGCTGTTATATTTGGT 59.903 45.455 21.76 0.00 45.24 3.67
77 78 3.788797 GCAGCGTGCTGTTATATTTGGTC 60.789 47.826 21.76 0.00 45.24 4.02
78 79 3.373748 CAGCGTGCTGTTATATTTGGTCA 59.626 43.478 13.62 0.00 39.10 4.02
79 80 3.374058 AGCGTGCTGTTATATTTGGTCAC 59.626 43.478 0.00 0.00 0.00 3.67
80 81 3.374058 GCGTGCTGTTATATTTGGTCACT 59.626 43.478 0.00 0.00 0.00 3.41
81 82 4.142687 GCGTGCTGTTATATTTGGTCACTT 60.143 41.667 0.00 0.00 0.00 3.16
82 83 5.323900 CGTGCTGTTATATTTGGTCACTTG 58.676 41.667 0.00 0.00 0.00 3.16
83 84 5.106712 CGTGCTGTTATATTTGGTCACTTGT 60.107 40.000 0.00 0.00 0.00 3.16
84 85 6.567701 CGTGCTGTTATATTTGGTCACTTGTT 60.568 38.462 0.00 0.00 0.00 2.83
85 86 7.145323 GTGCTGTTATATTTGGTCACTTGTTT 58.855 34.615 0.00 0.00 0.00 2.83
86 87 7.114811 GTGCTGTTATATTTGGTCACTTGTTTG 59.885 37.037 0.00 0.00 0.00 2.93
87 88 6.089417 GCTGTTATATTTGGTCACTTGTTTGC 59.911 38.462 0.00 0.00 0.00 3.68
88 89 7.283625 TGTTATATTTGGTCACTTGTTTGCT 57.716 32.000 0.00 0.00 0.00 3.91
89 90 7.367285 TGTTATATTTGGTCACTTGTTTGCTC 58.633 34.615 0.00 0.00 0.00 4.26
90 91 7.230510 TGTTATATTTGGTCACTTGTTTGCTCT 59.769 33.333 0.00 0.00 0.00 4.09
91 92 6.655078 ATATTTGGTCACTTGTTTGCTCTT 57.345 33.333 0.00 0.00 0.00 2.85
92 93 4.370364 TTTGGTCACTTGTTTGCTCTTC 57.630 40.909 0.00 0.00 0.00 2.87
93 94 2.297701 TGGTCACTTGTTTGCTCTTCC 58.702 47.619 0.00 0.00 0.00 3.46
94 95 2.092429 TGGTCACTTGTTTGCTCTTCCT 60.092 45.455 0.00 0.00 0.00 3.36
95 96 2.291741 GGTCACTTGTTTGCTCTTCCTG 59.708 50.000 0.00 0.00 0.00 3.86
96 97 3.206150 GTCACTTGTTTGCTCTTCCTGA 58.794 45.455 0.00 0.00 0.00 3.86
97 98 3.817647 GTCACTTGTTTGCTCTTCCTGAT 59.182 43.478 0.00 0.00 0.00 2.90
98 99 4.276926 GTCACTTGTTTGCTCTTCCTGATT 59.723 41.667 0.00 0.00 0.00 2.57
99 100 4.276678 TCACTTGTTTGCTCTTCCTGATTG 59.723 41.667 0.00 0.00 0.00 2.67
100 101 4.037208 CACTTGTTTGCTCTTCCTGATTGT 59.963 41.667 0.00 0.00 0.00 2.71
101 102 4.646492 ACTTGTTTGCTCTTCCTGATTGTT 59.354 37.500 0.00 0.00 0.00 2.83
102 103 5.827797 ACTTGTTTGCTCTTCCTGATTGTTA 59.172 36.000 0.00 0.00 0.00 2.41
103 104 6.321181 ACTTGTTTGCTCTTCCTGATTGTTAA 59.679 34.615 0.00 0.00 0.00 2.01
104 105 6.317789 TGTTTGCTCTTCCTGATTGTTAAG 57.682 37.500 0.00 0.00 0.00 1.85
105 106 5.157067 GTTTGCTCTTCCTGATTGTTAAGC 58.843 41.667 0.00 0.00 0.00 3.09
106 107 4.019792 TGCTCTTCCTGATTGTTAAGCA 57.980 40.909 0.00 0.00 36.26 3.91
107 108 4.397420 TGCTCTTCCTGATTGTTAAGCAA 58.603 39.130 0.00 0.00 41.89 3.91
108 109 4.826733 TGCTCTTCCTGATTGTTAAGCAAA 59.173 37.500 0.00 0.00 40.91 3.68
109 110 5.048504 TGCTCTTCCTGATTGTTAAGCAAAG 60.049 40.000 0.00 0.00 40.91 2.77
110 111 5.182001 GCTCTTCCTGATTGTTAAGCAAAGA 59.818 40.000 0.00 0.00 40.91 2.52
111 112 6.127786 GCTCTTCCTGATTGTTAAGCAAAGAT 60.128 38.462 0.00 0.00 40.91 2.40
112 113 7.149569 TCTTCCTGATTGTTAAGCAAAGATG 57.850 36.000 0.00 0.00 40.91 2.90
113 114 5.902613 TCCTGATTGTTAAGCAAAGATGG 57.097 39.130 0.00 0.00 40.91 3.51
114 115 4.706476 TCCTGATTGTTAAGCAAAGATGGG 59.294 41.667 0.00 0.00 40.91 4.00
115 116 4.706476 CCTGATTGTTAAGCAAAGATGGGA 59.294 41.667 0.00 0.00 40.91 4.37
116 117 5.185635 CCTGATTGTTAAGCAAAGATGGGAA 59.814 40.000 0.00 0.00 40.91 3.97
117 118 6.295236 CCTGATTGTTAAGCAAAGATGGGAAA 60.295 38.462 0.00 0.00 40.91 3.13
118 119 7.243604 TGATTGTTAAGCAAAGATGGGAAAT 57.756 32.000 0.00 0.00 40.91 2.17
119 120 7.098477 TGATTGTTAAGCAAAGATGGGAAATG 58.902 34.615 0.00 0.00 40.91 2.32
120 121 5.404466 TGTTAAGCAAAGATGGGAAATGG 57.596 39.130 0.00 0.00 0.00 3.16
121 122 5.083122 TGTTAAGCAAAGATGGGAAATGGA 58.917 37.500 0.00 0.00 0.00 3.41
122 123 5.721000 TGTTAAGCAAAGATGGGAAATGGAT 59.279 36.000 0.00 0.00 0.00 3.41
123 124 6.213195 TGTTAAGCAAAGATGGGAAATGGATT 59.787 34.615 0.00 0.00 0.00 3.01
124 125 5.767277 AAGCAAAGATGGGAAATGGATTT 57.233 34.783 0.00 0.00 0.00 2.17
125 126 6.872585 AAGCAAAGATGGGAAATGGATTTA 57.127 33.333 0.00 0.00 0.00 1.40
126 127 6.475596 AGCAAAGATGGGAAATGGATTTAG 57.524 37.500 0.00 0.00 0.00 1.85
127 128 5.960202 AGCAAAGATGGGAAATGGATTTAGT 59.040 36.000 0.00 0.00 0.00 2.24
128 129 6.441604 AGCAAAGATGGGAAATGGATTTAGTT 59.558 34.615 0.00 0.00 0.00 2.24
129 130 7.038088 AGCAAAGATGGGAAATGGATTTAGTTT 60.038 33.333 0.00 0.00 0.00 2.66
130 131 7.607607 GCAAAGATGGGAAATGGATTTAGTTTT 59.392 33.333 0.00 0.00 0.00 2.43
131 132 8.938906 CAAAGATGGGAAATGGATTTAGTTTTG 58.061 33.333 0.00 0.00 0.00 2.44
132 133 7.186570 AGATGGGAAATGGATTTAGTTTTGG 57.813 36.000 0.00 0.00 0.00 3.28
133 134 5.159273 TGGGAAATGGATTTAGTTTTGGC 57.841 39.130 0.00 0.00 0.00 4.52
134 135 4.594920 TGGGAAATGGATTTAGTTTTGGCA 59.405 37.500 0.00 0.00 0.00 4.92
135 136 5.072329 TGGGAAATGGATTTAGTTTTGGCAA 59.928 36.000 0.00 0.00 0.00 4.52
136 137 5.643348 GGGAAATGGATTTAGTTTTGGCAAG 59.357 40.000 0.00 0.00 0.00 4.01
137 138 6.463360 GGAAATGGATTTAGTTTTGGCAAGA 58.537 36.000 0.00 0.00 0.00 3.02
138 139 6.934083 GGAAATGGATTTAGTTTTGGCAAGAA 59.066 34.615 0.00 0.00 0.00 2.52
139 140 7.118245 GGAAATGGATTTAGTTTTGGCAAGAAG 59.882 37.037 0.00 0.00 0.00 2.85
140 141 5.467035 TGGATTTAGTTTTGGCAAGAAGG 57.533 39.130 0.00 0.00 0.00 3.46
141 142 5.144100 TGGATTTAGTTTTGGCAAGAAGGA 58.856 37.500 0.00 0.00 0.00 3.36
142 143 5.600484 TGGATTTAGTTTTGGCAAGAAGGAA 59.400 36.000 0.00 0.00 0.00 3.36
143 144 5.926542 GGATTTAGTTTTGGCAAGAAGGAAC 59.073 40.000 0.00 1.63 0.00 3.62
145 146 5.514274 TTAGTTTTGGCAAGAAGGAACTG 57.486 39.130 19.40 0.00 40.86 3.16
146 147 2.695147 AGTTTTGGCAAGAAGGAACTGG 59.305 45.455 12.17 0.00 40.86 4.00
147 148 2.693074 GTTTTGGCAAGAAGGAACTGGA 59.307 45.455 0.00 0.00 40.86 3.86
148 149 2.276732 TTGGCAAGAAGGAACTGGAG 57.723 50.000 0.00 0.00 40.86 3.86
149 150 1.434188 TGGCAAGAAGGAACTGGAGA 58.566 50.000 0.00 0.00 40.86 3.71
150 151 1.774254 TGGCAAGAAGGAACTGGAGAA 59.226 47.619 0.00 0.00 40.86 2.87
151 152 2.376518 TGGCAAGAAGGAACTGGAGAAT 59.623 45.455 0.00 0.00 40.86 2.40
152 153 3.013219 GGCAAGAAGGAACTGGAGAATC 58.987 50.000 0.00 0.00 40.86 2.52
153 154 2.675348 GCAAGAAGGAACTGGAGAATCG 59.325 50.000 0.00 0.00 40.86 3.34
154 155 3.866449 GCAAGAAGGAACTGGAGAATCGT 60.866 47.826 0.00 0.00 40.86 3.73
155 156 3.601443 AGAAGGAACTGGAGAATCGTG 57.399 47.619 0.00 0.00 40.86 4.35
156 157 2.900546 AGAAGGAACTGGAGAATCGTGT 59.099 45.455 0.00 0.00 40.86 4.49
157 158 4.087182 AGAAGGAACTGGAGAATCGTGTA 58.913 43.478 0.00 0.00 40.86 2.90
158 159 4.158764 AGAAGGAACTGGAGAATCGTGTAG 59.841 45.833 0.00 0.00 40.86 2.74
159 160 2.166664 AGGAACTGGAGAATCGTGTAGC 59.833 50.000 0.00 0.00 37.18 3.58
160 161 2.186076 GAACTGGAGAATCGTGTAGCG 58.814 52.381 0.00 0.00 43.01 4.26
161 162 1.174783 ACTGGAGAATCGTGTAGCGT 58.825 50.000 0.00 0.00 42.13 5.07
162 163 1.544691 ACTGGAGAATCGTGTAGCGTT 59.455 47.619 0.00 0.00 42.13 4.84
163 164 2.029290 ACTGGAGAATCGTGTAGCGTTT 60.029 45.455 0.00 0.00 42.13 3.60
164 165 2.599082 CTGGAGAATCGTGTAGCGTTTC 59.401 50.000 0.00 0.00 44.91 2.78
165 166 1.925185 GGAGAATCGTGTAGCGTTTCC 59.075 52.381 6.76 0.00 45.39 3.13
166 167 2.416972 GGAGAATCGTGTAGCGTTTCCT 60.417 50.000 6.76 0.00 45.39 3.36
167 168 2.599082 GAGAATCGTGTAGCGTTTCCTG 59.401 50.000 6.76 0.00 45.39 3.86
168 169 1.060698 GAATCGTGTAGCGTTTCCTGC 59.939 52.381 0.00 0.00 41.11 4.85
169 170 0.037697 ATCGTGTAGCGTTTCCTGCA 60.038 50.000 0.00 0.00 42.13 4.41
170 171 0.942410 TCGTGTAGCGTTTCCTGCAC 60.942 55.000 1.11 1.11 42.63 4.57
171 172 0.944311 CGTGTAGCGTTTCCTGCACT 60.944 55.000 8.36 0.00 43.49 4.40
172 173 1.226746 GTGTAGCGTTTCCTGCACTT 58.773 50.000 3.65 0.00 42.72 3.16
173 174 2.409975 GTGTAGCGTTTCCTGCACTTA 58.590 47.619 3.65 0.00 42.72 2.24
174 175 3.000727 GTGTAGCGTTTCCTGCACTTAT 58.999 45.455 3.65 0.00 42.72 1.73
175 176 3.435671 GTGTAGCGTTTCCTGCACTTATT 59.564 43.478 3.65 0.00 42.72 1.40
176 177 4.628333 GTGTAGCGTTTCCTGCACTTATTA 59.372 41.667 3.65 0.00 42.72 0.98
177 178 5.121142 GTGTAGCGTTTCCTGCACTTATTAA 59.879 40.000 3.65 0.00 42.72 1.40
178 179 5.701750 TGTAGCGTTTCCTGCACTTATTAAA 59.298 36.000 0.00 0.00 33.85 1.52
179 180 5.897377 AGCGTTTCCTGCACTTATTAAAT 57.103 34.783 0.00 0.00 33.85 1.40
180 181 6.995511 AGCGTTTCCTGCACTTATTAAATA 57.004 33.333 0.00 0.00 33.85 1.40
181 182 7.385778 AGCGTTTCCTGCACTTATTAAATAA 57.614 32.000 0.00 0.00 33.85 1.40
182 183 7.996385 AGCGTTTCCTGCACTTATTAAATAAT 58.004 30.769 0.00 0.00 33.85 1.28
183 184 8.129211 AGCGTTTCCTGCACTTATTAAATAATC 58.871 33.333 0.00 0.00 33.85 1.75
184 185 7.913297 GCGTTTCCTGCACTTATTAAATAATCA 59.087 33.333 0.00 0.00 0.00 2.57
185 186 9.781834 CGTTTCCTGCACTTATTAAATAATCAA 57.218 29.630 0.00 0.00 0.00 2.57
188 189 9.474313 TTCCTGCACTTATTAAATAATCAAGGT 57.526 29.630 0.00 0.00 0.00 3.50
189 190 9.474313 TCCTGCACTTATTAAATAATCAAGGTT 57.526 29.630 0.00 0.00 0.00 3.50
190 191 9.520204 CCTGCACTTATTAAATAATCAAGGTTG 57.480 33.333 0.00 0.00 0.00 3.77
198 199 7.513371 TTAAATAATCAAGGTTGTTCGGTGT 57.487 32.000 0.00 0.00 0.00 4.16
199 200 5.371115 AATAATCAAGGTTGTTCGGTGTG 57.629 39.130 0.00 0.00 0.00 3.82
200 201 0.951558 ATCAAGGTTGTTCGGTGTGC 59.048 50.000 0.00 0.00 0.00 4.57
201 202 0.393132 TCAAGGTTGTTCGGTGTGCA 60.393 50.000 0.00 0.00 0.00 4.57
202 203 0.029300 CAAGGTTGTTCGGTGTGCAG 59.971 55.000 0.00 0.00 0.00 4.41
203 204 1.724582 AAGGTTGTTCGGTGTGCAGC 61.725 55.000 0.00 0.00 0.00 5.25
211 212 3.181367 GGTGTGCAGCGATTCCTG 58.819 61.111 0.00 0.00 35.93 3.86
222 223 5.437289 CAGCGATTCCTGCCATTATTAAA 57.563 39.130 0.00 0.00 0.00 1.52
223 224 6.017400 CAGCGATTCCTGCCATTATTAAAT 57.983 37.500 0.00 0.00 0.00 1.40
224 225 5.860182 CAGCGATTCCTGCCATTATTAAATG 59.140 40.000 0.00 0.00 41.90 2.32
225 226 5.536161 AGCGATTCCTGCCATTATTAAATGT 59.464 36.000 0.00 0.00 40.84 2.71
226 227 6.040842 AGCGATTCCTGCCATTATTAAATGTT 59.959 34.615 0.00 0.00 40.84 2.71
227 228 6.363357 GCGATTCCTGCCATTATTAAATGTTC 59.637 38.462 0.00 0.00 40.84 3.18
228 229 7.424803 CGATTCCTGCCATTATTAAATGTTCA 58.575 34.615 0.00 0.00 40.84 3.18
229 230 7.592533 CGATTCCTGCCATTATTAAATGTTCAG 59.407 37.037 9.06 9.06 40.84 3.02
231 232 5.846203 CCTGCCATTATTAAATGTTCAGGG 58.154 41.667 18.90 8.61 45.96 4.45
232 233 5.275067 TGCCATTATTAAATGTTCAGGGC 57.725 39.130 0.00 0.00 40.84 5.19
233 234 4.961730 TGCCATTATTAAATGTTCAGGGCT 59.038 37.500 0.00 0.00 40.84 5.19
234 235 5.163426 TGCCATTATTAAATGTTCAGGGCTG 60.163 40.000 0.00 0.00 40.84 4.85
235 236 5.068987 GCCATTATTAAATGTTCAGGGCTGA 59.931 40.000 0.00 0.00 40.84 4.26
236 237 6.239402 GCCATTATTAAATGTTCAGGGCTGAT 60.239 38.462 0.00 0.00 40.84 2.90
237 238 7.373493 CCATTATTAAATGTTCAGGGCTGATC 58.627 38.462 0.00 0.00 40.84 2.92
238 239 6.618287 TTATTAAATGTTCAGGGCTGATCG 57.382 37.500 0.00 0.00 39.64 3.69
239 240 2.787473 AAATGTTCAGGGCTGATCGA 57.213 45.000 0.00 0.00 39.64 3.59
240 241 3.287867 AAATGTTCAGGGCTGATCGAT 57.712 42.857 0.00 0.00 39.64 3.59
241 242 2.251409 ATGTTCAGGGCTGATCGATG 57.749 50.000 0.54 0.00 39.64 3.84
242 243 0.904649 TGTTCAGGGCTGATCGATGT 59.095 50.000 0.54 0.00 39.64 3.06
243 244 1.293924 GTTCAGGGCTGATCGATGTG 58.706 55.000 0.54 0.00 39.64 3.21
244 245 0.462581 TTCAGGGCTGATCGATGTGC 60.463 55.000 0.54 6.66 39.64 4.57
245 246 1.153309 CAGGGCTGATCGATGTGCA 60.153 57.895 17.42 3.80 0.00 4.57
246 247 0.745486 CAGGGCTGATCGATGTGCAA 60.745 55.000 17.42 0.00 0.00 4.08
247 248 0.463295 AGGGCTGATCGATGTGCAAG 60.463 55.000 17.42 3.75 0.00 4.01
248 249 0.745845 GGGCTGATCGATGTGCAAGT 60.746 55.000 17.42 0.00 0.00 3.16
249 250 0.376152 GGCTGATCGATGTGCAAGTG 59.624 55.000 17.42 0.00 0.00 3.16
250 251 0.247974 GCTGATCGATGTGCAAGTGC 60.248 55.000 0.54 0.00 42.50 4.40
269 270 2.320805 CAAGTGTGCAACGATTCCTG 57.679 50.000 0.00 0.00 42.39 3.86
270 271 0.593128 AAGTGTGCAACGATTCCTGC 59.407 50.000 0.00 0.00 42.39 4.85
271 272 1.210155 GTGTGCAACGATTCCTGCC 59.790 57.895 0.00 0.00 42.39 4.85
272 273 1.228094 TGTGCAACGATTCCTGCCA 60.228 52.632 0.00 0.04 42.39 4.92
273 274 0.608856 TGTGCAACGATTCCTGCCAT 60.609 50.000 0.00 0.00 42.39 4.40
274 275 0.527565 GTGCAACGATTCCTGCCATT 59.472 50.000 0.00 0.00 37.79 3.16
275 276 1.742831 GTGCAACGATTCCTGCCATTA 59.257 47.619 0.00 0.00 37.79 1.90
276 277 2.358898 GTGCAACGATTCCTGCCATTAT 59.641 45.455 0.00 0.00 37.79 1.28
277 278 3.023119 TGCAACGATTCCTGCCATTATT 58.977 40.909 0.00 0.00 37.79 1.40
278 279 4.036262 GTGCAACGATTCCTGCCATTATTA 59.964 41.667 0.00 0.00 37.79 0.98
279 280 4.642437 TGCAACGATTCCTGCCATTATTAA 59.358 37.500 0.00 0.00 37.79 1.40
280 281 5.126222 TGCAACGATTCCTGCCATTATTAAA 59.874 36.000 0.00 0.00 37.79 1.52
281 282 6.183360 TGCAACGATTCCTGCCATTATTAAAT 60.183 34.615 0.00 0.00 37.79 1.40
282 283 6.144402 GCAACGATTCCTGCCATTATTAAATG 59.856 38.462 0.00 0.00 41.90 2.32
283 284 6.959639 ACGATTCCTGCCATTATTAAATGT 57.040 33.333 0.00 0.00 40.84 2.71
284 285 7.346751 ACGATTCCTGCCATTATTAAATGTT 57.653 32.000 0.00 0.00 40.84 2.71
285 286 7.425606 ACGATTCCTGCCATTATTAAATGTTC 58.574 34.615 0.00 0.00 40.84 3.18
286 287 6.578545 CGATTCCTGCCATTATTAAATGTTCG 59.421 38.462 0.00 0.00 40.84 3.95
287 288 5.766150 TCCTGCCATTATTAAATGTTCGG 57.234 39.130 0.00 0.00 40.84 4.30
288 289 5.197451 TCCTGCCATTATTAAATGTTCGGT 58.803 37.500 0.00 0.00 40.84 4.69
289 290 5.298276 TCCTGCCATTATTAAATGTTCGGTC 59.702 40.000 0.00 0.00 40.84 4.79
290 291 5.067153 CCTGCCATTATTAAATGTTCGGTCA 59.933 40.000 0.00 0.00 40.84 4.02
291 292 6.130298 TGCCATTATTAAATGTTCGGTCAG 57.870 37.500 0.00 0.00 40.84 3.51
292 293 5.883115 TGCCATTATTAAATGTTCGGTCAGA 59.117 36.000 0.00 0.00 40.84 3.27
293 294 6.375736 TGCCATTATTAAATGTTCGGTCAGAA 59.624 34.615 0.00 0.00 40.84 3.02
312 313 4.827481 CGATGACCGGACCGAAAT 57.173 55.556 17.49 5.49 33.91 2.17
313 314 2.589890 CGATGACCGGACCGAAATC 58.410 57.895 17.49 13.54 33.91 2.17
314 315 0.102481 CGATGACCGGACCGAAATCT 59.898 55.000 17.49 0.00 33.91 2.40
315 316 1.470979 CGATGACCGGACCGAAATCTT 60.471 52.381 17.49 8.06 33.91 2.40
316 317 2.223641 CGATGACCGGACCGAAATCTTA 60.224 50.000 17.49 0.00 33.91 2.10
317 318 2.953466 TGACCGGACCGAAATCTTAG 57.047 50.000 17.49 0.00 0.00 2.18
318 319 2.173519 TGACCGGACCGAAATCTTAGT 58.826 47.619 17.49 0.95 0.00 2.24
319 320 2.094390 TGACCGGACCGAAATCTTAGTG 60.094 50.000 17.49 0.00 0.00 2.74
320 321 1.287425 CCGGACCGAAATCTTAGTGC 58.713 55.000 17.49 0.00 0.00 4.40
321 322 0.921347 CGGACCGAAATCTTAGTGCG 59.079 55.000 8.64 0.00 37.71 5.34
322 323 1.287425 GGACCGAAATCTTAGTGCGG 58.713 55.000 0.00 0.00 46.83 5.69
325 326 2.004583 CCGAAATCTTAGTGCGGTCA 57.995 50.000 0.00 0.00 37.35 4.02
326 327 2.550978 CCGAAATCTTAGTGCGGTCAT 58.449 47.619 0.00 0.00 37.35 3.06
327 328 2.936498 CCGAAATCTTAGTGCGGTCATT 59.064 45.455 0.00 0.00 37.35 2.57
328 329 3.001330 CCGAAATCTTAGTGCGGTCATTC 59.999 47.826 0.00 0.00 37.35 2.67
329 330 3.616821 CGAAATCTTAGTGCGGTCATTCA 59.383 43.478 0.00 0.00 0.00 2.57
330 331 4.271049 CGAAATCTTAGTGCGGTCATTCAT 59.729 41.667 0.00 0.00 0.00 2.57
331 332 5.557136 CGAAATCTTAGTGCGGTCATTCATC 60.557 44.000 0.00 0.00 0.00 2.92
332 333 2.809446 TCTTAGTGCGGTCATTCATCG 58.191 47.619 0.00 0.00 0.00 3.84
333 334 1.860950 CTTAGTGCGGTCATTCATCGG 59.139 52.381 0.00 0.00 0.00 4.18
334 335 0.821517 TAGTGCGGTCATTCATCGGT 59.178 50.000 0.00 0.00 0.00 4.69
335 336 0.036388 AGTGCGGTCATTCATCGGTT 60.036 50.000 0.00 0.00 0.00 4.44
336 337 0.802494 GTGCGGTCATTCATCGGTTT 59.198 50.000 0.00 0.00 0.00 3.27
337 338 0.801872 TGCGGTCATTCATCGGTTTG 59.198 50.000 0.00 0.00 0.00 2.93
338 339 0.802494 GCGGTCATTCATCGGTTTGT 59.198 50.000 0.00 0.00 0.00 2.83
339 340 1.465689 GCGGTCATTCATCGGTTTGTG 60.466 52.381 0.00 0.00 0.00 3.33
340 341 1.465689 CGGTCATTCATCGGTTTGTGC 60.466 52.381 0.00 0.00 0.00 4.57
341 342 1.812571 GGTCATTCATCGGTTTGTGCT 59.187 47.619 0.00 0.00 0.00 4.40
342 343 2.159517 GGTCATTCATCGGTTTGTGCTC 60.160 50.000 0.00 0.00 0.00 4.26
343 344 2.744202 GTCATTCATCGGTTTGTGCTCT 59.256 45.455 0.00 0.00 0.00 4.09
344 345 3.189287 GTCATTCATCGGTTTGTGCTCTT 59.811 43.478 0.00 0.00 0.00 2.85
345 346 3.820467 TCATTCATCGGTTTGTGCTCTTT 59.180 39.130 0.00 0.00 0.00 2.52
346 347 3.896648 TTCATCGGTTTGTGCTCTTTC 57.103 42.857 0.00 0.00 0.00 2.62
347 348 2.151202 TCATCGGTTTGTGCTCTTTCC 58.849 47.619 0.00 0.00 0.00 3.13
348 349 1.879380 CATCGGTTTGTGCTCTTTCCA 59.121 47.619 0.00 0.00 0.00 3.53
349 350 2.270352 TCGGTTTGTGCTCTTTCCAT 57.730 45.000 0.00 0.00 0.00 3.41
350 351 2.582052 TCGGTTTGTGCTCTTTCCATT 58.418 42.857 0.00 0.00 0.00 3.16
351 352 2.293122 TCGGTTTGTGCTCTTTCCATTG 59.707 45.455 0.00 0.00 0.00 2.82
352 353 2.293122 CGGTTTGTGCTCTTTCCATTGA 59.707 45.455 0.00 0.00 0.00 2.57
353 354 3.642705 GGTTTGTGCTCTTTCCATTGAC 58.357 45.455 0.00 0.00 0.00 3.18
354 355 3.552890 GGTTTGTGCTCTTTCCATTGACC 60.553 47.826 0.00 0.00 0.00 4.02
355 356 1.522668 TGTGCTCTTTCCATTGACCG 58.477 50.000 0.00 0.00 0.00 4.79
356 357 1.071542 TGTGCTCTTTCCATTGACCGA 59.928 47.619 0.00 0.00 0.00 4.69
357 358 2.290260 TGTGCTCTTTCCATTGACCGAT 60.290 45.455 0.00 0.00 0.00 4.18
358 359 2.352960 GTGCTCTTTCCATTGACCGATC 59.647 50.000 0.00 0.00 0.00 3.69
359 360 1.594862 GCTCTTTCCATTGACCGATCG 59.405 52.381 8.51 8.51 0.00 3.69
360 361 2.205074 CTCTTTCCATTGACCGATCGG 58.795 52.381 32.20 32.20 42.03 4.18
370 371 4.420143 CCGATCGGTCAGCGATTT 57.580 55.556 26.35 0.00 0.00 2.17
371 372 2.677971 CCGATCGGTCAGCGATTTT 58.322 52.632 26.35 0.00 0.00 1.82
372 373 0.301687 CCGATCGGTCAGCGATTTTG 59.698 55.000 26.35 6.65 0.00 2.44
373 374 0.301687 CGATCGGTCAGCGATTTTGG 59.698 55.000 13.98 0.00 0.00 3.28
374 375 1.651987 GATCGGTCAGCGATTTTGGA 58.348 50.000 13.98 0.00 0.00 3.53
375 376 1.327764 GATCGGTCAGCGATTTTGGAC 59.672 52.381 13.98 0.00 0.00 4.02
376 377 0.034198 TCGGTCAGCGATTTTGGACA 59.966 50.000 0.00 0.00 32.00 4.02
377 378 0.871722 CGGTCAGCGATTTTGGACAA 59.128 50.000 0.00 0.00 32.00 3.18
378 379 1.399727 CGGTCAGCGATTTTGGACAAC 60.400 52.381 0.00 0.00 32.00 3.32
379 380 1.068541 GGTCAGCGATTTTGGACAACC 60.069 52.381 0.00 0.00 32.00 3.77
380 381 0.871722 TCAGCGATTTTGGACAACCG 59.128 50.000 0.00 0.00 39.42 4.44
381 382 0.871722 CAGCGATTTTGGACAACCGA 59.128 50.000 0.00 0.00 39.42 4.69
382 383 1.265635 CAGCGATTTTGGACAACCGAA 59.734 47.619 0.00 0.00 39.42 4.30
392 393 7.435068 TTTTGGACAACCGAAATTTTTGAAA 57.565 28.000 7.85 0.00 42.61 2.69
393 394 6.654793 TTGGACAACCGAAATTTTTGAAAG 57.345 33.333 7.85 0.00 39.42 2.62
394 395 5.967088 TGGACAACCGAAATTTTTGAAAGA 58.033 33.333 7.85 0.00 39.42 2.52
395 396 5.808030 TGGACAACCGAAATTTTTGAAAGAC 59.192 36.000 7.85 0.00 39.42 3.01
396 397 5.233476 GGACAACCGAAATTTTTGAAAGACC 59.767 40.000 7.85 0.00 0.00 3.85
397 398 4.801516 ACAACCGAAATTTTTGAAAGACCG 59.198 37.500 7.85 0.00 0.00 4.79
398 399 4.904253 ACCGAAATTTTTGAAAGACCGA 57.096 36.364 0.00 0.00 0.00 4.69
399 400 5.251601 ACCGAAATTTTTGAAAGACCGAA 57.748 34.783 0.00 0.00 0.00 4.30
400 401 5.278604 ACCGAAATTTTTGAAAGACCGAAG 58.721 37.500 0.00 0.00 0.00 3.79
401 402 4.148174 CCGAAATTTTTGAAAGACCGAAGC 59.852 41.667 0.00 0.00 0.00 3.86
402 403 4.737765 CGAAATTTTTGAAAGACCGAAGCA 59.262 37.500 0.00 0.00 0.00 3.91
403 404 5.331532 CGAAATTTTTGAAAGACCGAAGCAC 60.332 40.000 0.00 0.00 0.00 4.40
404 405 3.430333 TTTTTGAAAGACCGAAGCACC 57.570 42.857 0.00 0.00 0.00 5.01
405 406 0.941542 TTTGAAAGACCGAAGCACCG 59.058 50.000 0.00 0.00 0.00 4.94
406 407 0.105224 TTGAAAGACCGAAGCACCGA 59.895 50.000 0.00 0.00 0.00 4.69
407 408 0.599204 TGAAAGACCGAAGCACCGAC 60.599 55.000 0.00 0.00 0.00 4.79
408 409 1.289800 GAAAGACCGAAGCACCGACC 61.290 60.000 0.00 0.00 0.00 4.79
409 410 2.726822 AAAGACCGAAGCACCGACCC 62.727 60.000 0.00 0.00 0.00 4.46
412 413 4.367023 CCGAAGCACCGACCCGAA 62.367 66.667 0.00 0.00 0.00 4.30
413 414 3.110178 CGAAGCACCGACCCGAAC 61.110 66.667 0.00 0.00 0.00 3.95
414 415 3.110178 GAAGCACCGACCCGAACG 61.110 66.667 0.00 0.00 0.00 3.95
509 512 1.004560 CAAGAAGGCTCGCAGGACA 60.005 57.895 0.00 0.00 0.00 4.02
566 569 1.433534 GCCTCTCCAACAAGTTCTCG 58.566 55.000 0.00 0.00 0.00 4.04
570 573 2.035961 CTCTCCAACAAGTTCTCGGACA 59.964 50.000 0.00 0.00 0.00 4.02
573 576 1.581934 CAACAAGTTCTCGGACAGCA 58.418 50.000 0.00 0.00 0.00 4.41
782 785 1.216977 CGGTCCGCTGGTCATTACA 59.783 57.895 0.00 0.00 0.00 2.41
853 856 2.263540 GAAGGCCGCCGTCAAGTA 59.736 61.111 19.23 0.00 32.42 2.24
890 893 2.372690 CGCCGTCGACTTTGTGAGG 61.373 63.158 14.70 6.51 38.10 3.86
899 902 2.772287 GACTTTGTGAGGAAGGTCAGG 58.228 52.381 0.00 0.00 0.00 3.86
954 989 5.999205 ATCATATGTTTGTGGCTTCCAAA 57.001 34.783 1.90 0.00 34.18 3.28
955 990 5.999205 TCATATGTTTGTGGCTTCCAAAT 57.001 34.783 1.90 0.00 34.18 2.32
956 991 6.357579 TCATATGTTTGTGGCTTCCAAATT 57.642 33.333 1.90 0.00 34.18 1.82
957 992 6.767456 TCATATGTTTGTGGCTTCCAAATTT 58.233 32.000 1.90 0.00 34.18 1.82
958 993 6.873076 TCATATGTTTGTGGCTTCCAAATTTC 59.127 34.615 1.90 0.00 34.18 2.17
959 994 4.478206 TGTTTGTGGCTTCCAAATTTCA 57.522 36.364 0.00 0.00 34.18 2.69
960 995 5.033589 TGTTTGTGGCTTCCAAATTTCAT 57.966 34.783 0.00 0.00 34.18 2.57
961 996 4.815308 TGTTTGTGGCTTCCAAATTTCATG 59.185 37.500 0.00 0.00 34.18 3.07
968 1003 5.526846 TGGCTTCCAAATTTCATGTTTCAAC 59.473 36.000 0.00 0.00 0.00 3.18
980 1015 4.099266 TCATGTTTCAACTTTCAACCCTGG 59.901 41.667 0.00 0.00 0.00 4.45
1065 1104 0.326264 AGGCCACGAAGAAGCTCATT 59.674 50.000 5.01 0.00 0.00 2.57
1066 1105 1.555075 AGGCCACGAAGAAGCTCATTA 59.445 47.619 5.01 0.00 0.00 1.90
1067 1106 2.171448 AGGCCACGAAGAAGCTCATTAT 59.829 45.455 5.01 0.00 0.00 1.28
1068 1107 3.388024 AGGCCACGAAGAAGCTCATTATA 59.612 43.478 5.01 0.00 0.00 0.98
1069 1108 4.127171 GGCCACGAAGAAGCTCATTATAA 58.873 43.478 0.00 0.00 0.00 0.98
1070 1109 4.757149 GGCCACGAAGAAGCTCATTATAAT 59.243 41.667 0.00 0.00 0.00 1.28
1071 1110 5.239525 GGCCACGAAGAAGCTCATTATAATT 59.760 40.000 0.00 0.00 0.00 1.40
1155 1194 0.178990 ACTTCAAGGGCAAGTGGGAC 60.179 55.000 0.00 0.00 32.65 4.46
1181 1220 3.429141 CAGCAAGAGCCGCACCAG 61.429 66.667 0.00 0.00 43.56 4.00
1258 1305 2.432628 GCAGCCGCGACAAGTACT 60.433 61.111 8.23 0.00 0.00 2.73
1260 1307 1.956620 GCAGCCGCGACAAGTACTTC 61.957 60.000 8.23 0.00 0.00 3.01
1267 1314 1.342082 CGACAAGTACTTCGTGGCCG 61.342 60.000 4.77 4.66 29.77 6.13
1268 1315 0.038892 GACAAGTACTTCGTGGCCGA 60.039 55.000 4.77 0.00 42.41 5.54
1270 1317 1.012486 CAAGTACTTCGTGGCCGACC 61.012 60.000 4.77 0.00 44.13 4.79
1271 1318 2.482296 AAGTACTTCGTGGCCGACCG 62.482 60.000 1.12 0.00 44.13 4.79
1365 1602 2.363795 ATCTTCCTCCCGACGGCA 60.364 61.111 8.86 0.00 0.00 5.69
1439 1676 0.817634 CTGTTCGACAACCTGCCCAA 60.818 55.000 0.00 0.00 0.00 4.12
1516 1757 4.615452 GCAGCATGAAGAAAGTTCTCAAGG 60.615 45.833 0.00 0.00 39.69 3.61
1569 1810 1.931906 CCGATCTGTCTGACATGGTG 58.068 55.000 11.45 0.00 0.00 4.17
1570 1811 1.472201 CCGATCTGTCTGACATGGTGG 60.472 57.143 11.45 7.78 0.00 4.61
1571 1812 1.478105 CGATCTGTCTGACATGGTGGA 59.522 52.381 11.45 5.08 0.00 4.02
1680 1924 3.896133 GCTGCATCCACCGCCATG 61.896 66.667 0.00 0.00 0.00 3.66
1682 1926 2.438254 TGCATCCACCGCCATGAC 60.438 61.111 0.00 0.00 0.00 3.06
1684 1928 2.591753 CATCCACCGCCATGACCT 59.408 61.111 0.00 0.00 0.00 3.85
1710 1963 3.750373 TTTATGCGCCTCCGAGCCC 62.750 63.158 4.18 0.00 36.29 5.19
1779 2032 0.249996 TTTCCCGTTCGGTGGTCTTC 60.250 55.000 10.36 0.00 0.00 2.87
1830 2086 5.488341 ACCGAGTAAAAGCTATCATGTGTT 58.512 37.500 0.00 0.00 0.00 3.32
1880 2139 2.557056 TGGCACCATAGATCTACTACGC 59.443 50.000 4.10 6.09 33.62 4.42
1885 2144 5.736492 GCACCATAGATCTACTACGCAGTTT 60.736 44.000 4.10 0.00 37.78 2.66
1887 2146 6.757010 CACCATAGATCTACTACGCAGTTTTT 59.243 38.462 4.10 0.00 37.78 1.94
2009 2268 9.471084 AAATAAATGTTCTTACGAAAAACAGGG 57.529 29.630 0.00 0.00 36.44 4.45
2010 2269 6.702716 AAATGTTCTTACGAAAAACAGGGA 57.297 33.333 0.00 0.00 36.44 4.20
2011 2270 6.894339 AATGTTCTTACGAAAAACAGGGAT 57.106 33.333 0.00 0.00 36.44 3.85
2012 2271 7.989416 AATGTTCTTACGAAAAACAGGGATA 57.011 32.000 0.00 0.00 36.44 2.59
2013 2272 8.575649 AATGTTCTTACGAAAAACAGGGATAT 57.424 30.769 0.00 0.00 36.44 1.63
2014 2273 7.605410 TGTTCTTACGAAAAACAGGGATATC 57.395 36.000 0.00 0.00 0.00 1.63
2015 2274 7.391620 TGTTCTTACGAAAAACAGGGATATCT 58.608 34.615 2.05 0.00 0.00 1.98
2016 2275 7.881232 TGTTCTTACGAAAAACAGGGATATCTT 59.119 33.333 2.05 0.00 0.00 2.40
2017 2276 8.388853 GTTCTTACGAAAAACAGGGATATCTTC 58.611 37.037 2.05 0.00 0.00 2.87
2018 2277 7.848128 TCTTACGAAAAACAGGGATATCTTCT 58.152 34.615 2.05 0.00 0.00 2.85
2019 2278 8.974238 TCTTACGAAAAACAGGGATATCTTCTA 58.026 33.333 2.05 0.00 0.00 2.10
2020 2279 9.250624 CTTACGAAAAACAGGGATATCTTCTAG 57.749 37.037 2.05 0.00 0.00 2.43
2021 2280 6.049790 ACGAAAAACAGGGATATCTTCTAGC 58.950 40.000 2.05 0.00 0.00 3.42
2022 2281 6.049149 CGAAAAACAGGGATATCTTCTAGCA 58.951 40.000 2.05 0.00 0.00 3.49
2023 2282 6.708054 CGAAAAACAGGGATATCTTCTAGCAT 59.292 38.462 2.05 0.00 0.00 3.79
2024 2283 7.227512 CGAAAAACAGGGATATCTTCTAGCATT 59.772 37.037 2.05 0.00 0.00 3.56
2025 2284 8.457238 AAAAACAGGGATATCTTCTAGCATTC 57.543 34.615 2.05 0.00 0.00 2.67
2026 2285 7.385894 AAACAGGGATATCTTCTAGCATTCT 57.614 36.000 2.05 0.00 0.00 2.40
2027 2286 7.385894 AACAGGGATATCTTCTAGCATTCTT 57.614 36.000 2.05 0.00 0.00 2.52
2028 2287 7.385894 ACAGGGATATCTTCTAGCATTCTTT 57.614 36.000 2.05 0.00 0.00 2.52
2029 2288 8.497910 ACAGGGATATCTTCTAGCATTCTTTA 57.502 34.615 2.05 0.00 0.00 1.85
2030 2289 9.110382 ACAGGGATATCTTCTAGCATTCTTTAT 57.890 33.333 2.05 0.00 0.00 1.40
2031 2290 9.598517 CAGGGATATCTTCTAGCATTCTTTATC 57.401 37.037 2.05 0.00 0.00 1.75
2032 2291 8.474025 AGGGATATCTTCTAGCATTCTTTATCG 58.526 37.037 2.05 0.00 0.00 2.92
2033 2292 8.470805 GGGATATCTTCTAGCATTCTTTATCGA 58.529 37.037 2.05 0.00 0.00 3.59
2034 2293 9.862371 GGATATCTTCTAGCATTCTTTATCGAA 57.138 33.333 2.05 0.00 0.00 3.71
2052 2311 9.811995 TTTATCGAATACTAGTATGTGTTTGCT 57.188 29.630 16.11 0.00 0.00 3.91
2053 2312 7.700322 ATCGAATACTAGTATGTGTTTGCTG 57.300 36.000 16.11 0.10 0.00 4.41
2054 2313 6.859017 TCGAATACTAGTATGTGTTTGCTGA 58.141 36.000 16.11 2.20 0.00 4.26
2055 2314 7.489160 TCGAATACTAGTATGTGTTTGCTGAT 58.511 34.615 16.11 0.00 0.00 2.90
2056 2315 8.626526 TCGAATACTAGTATGTGTTTGCTGATA 58.373 33.333 16.11 0.00 0.00 2.15
2057 2316 9.411801 CGAATACTAGTATGTGTTTGCTGATAT 57.588 33.333 16.11 0.00 0.00 1.63
2059 2318 9.494271 AATACTAGTATGTGTTTGCTGATATGG 57.506 33.333 16.11 0.00 0.00 2.74
2060 2319 7.124573 ACTAGTATGTGTTTGCTGATATGGA 57.875 36.000 0.00 0.00 0.00 3.41
2061 2320 7.564793 ACTAGTATGTGTTTGCTGATATGGAA 58.435 34.615 0.00 0.00 0.00 3.53
2062 2321 8.213679 ACTAGTATGTGTTTGCTGATATGGAAT 58.786 33.333 0.00 0.00 0.00 3.01
2063 2322 7.886629 AGTATGTGTTTGCTGATATGGAATT 57.113 32.000 0.00 0.00 0.00 2.17
2064 2323 8.297470 AGTATGTGTTTGCTGATATGGAATTT 57.703 30.769 0.00 0.00 0.00 1.82
2065 2324 8.752187 AGTATGTGTTTGCTGATATGGAATTTT 58.248 29.630 0.00 0.00 0.00 1.82
2066 2325 9.023967 GTATGTGTTTGCTGATATGGAATTTTC 57.976 33.333 0.00 0.00 0.00 2.29
2067 2326 7.230849 TGTGTTTGCTGATATGGAATTTTCT 57.769 32.000 0.00 0.00 0.00 2.52
2068 2327 7.092079 TGTGTTTGCTGATATGGAATTTTCTG 58.908 34.615 0.00 0.00 0.00 3.02
2069 2328 7.039853 TGTGTTTGCTGATATGGAATTTTCTGA 60.040 33.333 0.00 0.00 0.00 3.27
2070 2329 7.977853 GTGTTTGCTGATATGGAATTTTCTGAT 59.022 33.333 0.00 0.00 0.00 2.90
2071 2330 7.977293 TGTTTGCTGATATGGAATTTTCTGATG 59.023 33.333 0.00 0.00 0.00 3.07
2072 2331 6.644248 TGCTGATATGGAATTTTCTGATGG 57.356 37.500 0.00 0.00 0.00 3.51
2073 2332 6.367161 TGCTGATATGGAATTTTCTGATGGA 58.633 36.000 0.00 0.00 0.00 3.41
2074 2333 6.834969 TGCTGATATGGAATTTTCTGATGGAA 59.165 34.615 0.00 0.00 0.00 3.53
2075 2334 7.342541 TGCTGATATGGAATTTTCTGATGGAAA 59.657 33.333 0.00 0.00 41.58 3.13
2086 2345 6.729690 TTTCTGATGGAAAAAGGTCATTGT 57.270 33.333 0.00 0.00 40.51 2.71
2087 2346 7.831691 TTTCTGATGGAAAAAGGTCATTGTA 57.168 32.000 0.00 0.00 40.51 2.41
2088 2347 7.452880 TTCTGATGGAAAAAGGTCATTGTAG 57.547 36.000 0.00 0.00 0.00 2.74
2089 2348 6.542821 TCTGATGGAAAAAGGTCATTGTAGT 58.457 36.000 0.00 0.00 0.00 2.73
2090 2349 7.004086 TCTGATGGAAAAAGGTCATTGTAGTT 58.996 34.615 0.00 0.00 0.00 2.24
2091 2350 8.160765 TCTGATGGAAAAAGGTCATTGTAGTTA 58.839 33.333 0.00 0.00 0.00 2.24
2092 2351 8.335532 TGATGGAAAAAGGTCATTGTAGTTAG 57.664 34.615 0.00 0.00 0.00 2.34
2093 2352 7.942341 TGATGGAAAAAGGTCATTGTAGTTAGT 59.058 33.333 0.00 0.00 0.00 2.24
2094 2353 8.706322 ATGGAAAAAGGTCATTGTAGTTAGTT 57.294 30.769 0.00 0.00 0.00 2.24
2095 2354 7.936584 TGGAAAAAGGTCATTGTAGTTAGTTG 58.063 34.615 0.00 0.00 0.00 3.16
2096 2355 7.558444 TGGAAAAAGGTCATTGTAGTTAGTTGT 59.442 33.333 0.00 0.00 0.00 3.32
2097 2356 8.074370 GGAAAAAGGTCATTGTAGTTAGTTGTC 58.926 37.037 0.00 0.00 0.00 3.18
2098 2357 8.747538 AAAAAGGTCATTGTAGTTAGTTGTCT 57.252 30.769 0.00 0.00 0.00 3.41
2099 2358 7.730364 AAAGGTCATTGTAGTTAGTTGTCTG 57.270 36.000 0.00 0.00 0.00 3.51
2100 2359 5.794894 AGGTCATTGTAGTTAGTTGTCTGG 58.205 41.667 0.00 0.00 0.00 3.86
2101 2360 5.307196 AGGTCATTGTAGTTAGTTGTCTGGT 59.693 40.000 0.00 0.00 0.00 4.00
2102 2361 5.995897 GGTCATTGTAGTTAGTTGTCTGGTT 59.004 40.000 0.00 0.00 0.00 3.67
2103 2362 6.485648 GGTCATTGTAGTTAGTTGTCTGGTTT 59.514 38.462 0.00 0.00 0.00 3.27
2104 2363 7.307811 GGTCATTGTAGTTAGTTGTCTGGTTTC 60.308 40.741 0.00 0.00 0.00 2.78
2105 2364 7.225931 GTCATTGTAGTTAGTTGTCTGGTTTCA 59.774 37.037 0.00 0.00 0.00 2.69
2106 2365 7.936847 TCATTGTAGTTAGTTGTCTGGTTTCAT 59.063 33.333 0.00 0.00 0.00 2.57
2107 2366 7.490962 TTGTAGTTAGTTGTCTGGTTTCATG 57.509 36.000 0.00 0.00 0.00 3.07
2108 2367 5.468746 TGTAGTTAGTTGTCTGGTTTCATGC 59.531 40.000 0.00 0.00 0.00 4.06
2109 2368 4.718961 AGTTAGTTGTCTGGTTTCATGCT 58.281 39.130 0.00 0.00 0.00 3.79
2110 2369 5.133221 AGTTAGTTGTCTGGTTTCATGCTT 58.867 37.500 0.00 0.00 0.00 3.91
2141 2400 2.413310 AACCTTAGGCATACCGTTGG 57.587 50.000 0.00 0.00 42.76 3.77
2166 2425 1.679944 CCGAGGACCAAGCAATCACAT 60.680 52.381 0.00 0.00 0.00 3.21
2192 2452 3.491639 CACGACACCGAGATTTGTTAACA 59.508 43.478 3.59 3.59 39.50 2.41
2201 2461 5.238650 CCGAGATTTGTTAACAAGGTTCACT 59.761 40.000 19.72 13.43 37.15 3.41
2253 2513 2.997897 GCTCCTCCCCGTGACACT 60.998 66.667 3.68 0.00 0.00 3.55
2338 2598 4.314961 CGGTGCTATTATGTTGGCATAGA 58.685 43.478 0.00 0.00 38.64 1.98
2512 2772 2.771943 TCCACCTTGGCGAATATTCTCT 59.228 45.455 13.45 0.00 37.47 3.10
2599 2860 1.338200 CCGCTGCTACTCCAAAGACTT 60.338 52.381 0.00 0.00 0.00 3.01
2645 2906 4.731313 AGTCCCTTCTTTTCTTGACCAT 57.269 40.909 0.00 0.00 0.00 3.55
2729 2990 0.324614 TCAGTCCAACGCCATCACAT 59.675 50.000 0.00 0.00 0.00 3.21
2753 3014 2.143122 GATCACTGACCTGCGTGAAAA 58.857 47.619 0.00 0.00 42.73 2.29
2755 3016 3.394674 TCACTGACCTGCGTGAAAATA 57.605 42.857 0.00 0.00 37.23 1.40
2774 3035 7.816995 TGAAAATAAACAACTCACATATTGGGC 59.183 33.333 0.00 0.00 0.00 5.36
2782 3043 0.373370 CACATATTGGGCGTCACACG 59.627 55.000 0.00 0.00 45.88 4.49
2800 3061 9.990764 CGTCACACGTAAGAGTTACCTGAACTT 62.991 44.444 0.00 0.00 43.60 2.66
2813 3074 3.074412 CCTGAACTTAACATCACCGCTT 58.926 45.455 0.00 0.00 0.00 4.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.010012 ACGTAGCACAGATATGACATGATCA 59.990 40.000 0.00 0.00 43.13 2.92
29 30 5.465051 ACGTAGCACAGATATGACATGATC 58.535 41.667 0.00 0.00 0.00 2.92
30 31 5.242615 AGACGTAGCACAGATATGACATGAT 59.757 40.000 0.00 0.00 0.00 2.45
31 32 4.580580 AGACGTAGCACAGATATGACATGA 59.419 41.667 0.00 0.00 0.00 3.07
32 33 4.678742 CAGACGTAGCACAGATATGACATG 59.321 45.833 0.00 0.00 0.00 3.21
33 34 4.794329 GCAGACGTAGCACAGATATGACAT 60.794 45.833 7.52 0.00 0.00 3.06
34 35 3.489229 GCAGACGTAGCACAGATATGACA 60.489 47.826 7.52 0.00 0.00 3.58
35 36 3.046390 GCAGACGTAGCACAGATATGAC 58.954 50.000 7.52 0.00 0.00 3.06
36 37 2.687935 TGCAGACGTAGCACAGATATGA 59.312 45.455 10.75 0.00 37.02 2.15
37 38 3.048501 CTGCAGACGTAGCACAGATATG 58.951 50.000 8.42 0.00 37.02 1.78
38 39 3.361794 CTGCAGACGTAGCACAGATAT 57.638 47.619 8.42 0.00 37.02 1.63
39 40 2.851805 CTGCAGACGTAGCACAGATA 57.148 50.000 8.42 0.00 37.02 1.98
40 41 3.729356 CTGCAGACGTAGCACAGAT 57.271 52.632 8.42 0.00 37.02 2.90
46 47 3.843240 GCACGCTGCAGACGTAGC 61.843 66.667 27.36 26.03 46.41 3.58
57 58 3.374058 GTGACCAAATATAACAGCACGCT 59.626 43.478 0.00 0.00 0.00 5.07
58 59 3.374058 AGTGACCAAATATAACAGCACGC 59.626 43.478 0.00 0.00 0.00 5.34
59 60 5.106712 ACAAGTGACCAAATATAACAGCACG 60.107 40.000 0.00 0.00 0.00 5.34
60 61 6.254281 ACAAGTGACCAAATATAACAGCAC 57.746 37.500 0.00 0.00 0.00 4.40
61 62 6.892658 AACAAGTGACCAAATATAACAGCA 57.107 33.333 0.00 0.00 0.00 4.41
62 63 6.089417 GCAAACAAGTGACCAAATATAACAGC 59.911 38.462 0.00 0.00 0.00 4.40
63 64 7.370383 AGCAAACAAGTGACCAAATATAACAG 58.630 34.615 0.00 0.00 0.00 3.16
64 65 7.230510 AGAGCAAACAAGTGACCAAATATAACA 59.769 33.333 0.00 0.00 0.00 2.41
65 66 7.593825 AGAGCAAACAAGTGACCAAATATAAC 58.406 34.615 0.00 0.00 0.00 1.89
66 67 7.759489 AGAGCAAACAAGTGACCAAATATAA 57.241 32.000 0.00 0.00 0.00 0.98
67 68 7.094377 GGAAGAGCAAACAAGTGACCAAATATA 60.094 37.037 0.00 0.00 0.00 0.86
68 69 6.294731 GGAAGAGCAAACAAGTGACCAAATAT 60.295 38.462 0.00 0.00 0.00 1.28
69 70 5.009610 GGAAGAGCAAACAAGTGACCAAATA 59.990 40.000 0.00 0.00 0.00 1.40
70 71 4.202151 GGAAGAGCAAACAAGTGACCAAAT 60.202 41.667 0.00 0.00 0.00 2.32
71 72 3.130340 GGAAGAGCAAACAAGTGACCAAA 59.870 43.478 0.00 0.00 0.00 3.28
72 73 2.687935 GGAAGAGCAAACAAGTGACCAA 59.312 45.455 0.00 0.00 0.00 3.67
73 74 2.092429 AGGAAGAGCAAACAAGTGACCA 60.092 45.455 0.00 0.00 0.00 4.02
74 75 2.291741 CAGGAAGAGCAAACAAGTGACC 59.708 50.000 0.00 0.00 0.00 4.02
75 76 3.206150 TCAGGAAGAGCAAACAAGTGAC 58.794 45.455 0.00 0.00 0.00 3.67
76 77 3.558931 TCAGGAAGAGCAAACAAGTGA 57.441 42.857 0.00 0.00 0.00 3.41
77 78 4.037208 ACAATCAGGAAGAGCAAACAAGTG 59.963 41.667 0.00 0.00 0.00 3.16
78 79 4.210331 ACAATCAGGAAGAGCAAACAAGT 58.790 39.130 0.00 0.00 0.00 3.16
79 80 4.843220 ACAATCAGGAAGAGCAAACAAG 57.157 40.909 0.00 0.00 0.00 3.16
80 81 6.707440 TTAACAATCAGGAAGAGCAAACAA 57.293 33.333 0.00 0.00 0.00 2.83
81 82 5.278463 GCTTAACAATCAGGAAGAGCAAACA 60.278 40.000 0.00 0.00 0.00 2.83
82 83 5.157067 GCTTAACAATCAGGAAGAGCAAAC 58.843 41.667 0.00 0.00 0.00 2.93
83 84 4.826733 TGCTTAACAATCAGGAAGAGCAAA 59.173 37.500 0.00 0.00 36.12 3.68
84 85 4.397420 TGCTTAACAATCAGGAAGAGCAA 58.603 39.130 0.00 0.00 36.12 3.91
85 86 4.019792 TGCTTAACAATCAGGAAGAGCA 57.980 40.909 0.00 0.00 36.63 4.26
86 87 5.182001 TCTTTGCTTAACAATCAGGAAGAGC 59.818 40.000 0.00 0.00 38.31 4.09
87 88 6.808008 TCTTTGCTTAACAATCAGGAAGAG 57.192 37.500 0.00 0.00 38.31 2.85
88 89 6.151648 CCATCTTTGCTTAACAATCAGGAAGA 59.848 38.462 0.00 0.00 38.31 2.87
89 90 6.327934 CCATCTTTGCTTAACAATCAGGAAG 58.672 40.000 0.00 0.00 38.31 3.46
90 91 5.185635 CCCATCTTTGCTTAACAATCAGGAA 59.814 40.000 0.00 0.00 38.31 3.36
91 92 4.706476 CCCATCTTTGCTTAACAATCAGGA 59.294 41.667 0.00 0.00 38.31 3.86
92 93 4.706476 TCCCATCTTTGCTTAACAATCAGG 59.294 41.667 0.00 0.00 38.31 3.86
93 94 5.902613 TCCCATCTTTGCTTAACAATCAG 57.097 39.130 0.00 0.00 38.31 2.90
94 95 6.662865 TTTCCCATCTTTGCTTAACAATCA 57.337 33.333 0.00 0.00 38.31 2.57
95 96 6.536224 CCATTTCCCATCTTTGCTTAACAATC 59.464 38.462 0.00 0.00 38.31 2.67
96 97 6.213195 TCCATTTCCCATCTTTGCTTAACAAT 59.787 34.615 0.00 0.00 38.31 2.71
97 98 5.541868 TCCATTTCCCATCTTTGCTTAACAA 59.458 36.000 0.00 0.00 36.13 2.83
98 99 5.083122 TCCATTTCCCATCTTTGCTTAACA 58.917 37.500 0.00 0.00 0.00 2.41
99 100 5.659440 TCCATTTCCCATCTTTGCTTAAC 57.341 39.130 0.00 0.00 0.00 2.01
100 101 6.872585 AATCCATTTCCCATCTTTGCTTAA 57.127 33.333 0.00 0.00 0.00 1.85
101 102 6.872585 AAATCCATTTCCCATCTTTGCTTA 57.127 33.333 0.00 0.00 0.00 3.09
102 103 5.767277 AAATCCATTTCCCATCTTTGCTT 57.233 34.783 0.00 0.00 0.00 3.91
103 104 5.960202 ACTAAATCCATTTCCCATCTTTGCT 59.040 36.000 0.00 0.00 0.00 3.91
104 105 6.225981 ACTAAATCCATTTCCCATCTTTGC 57.774 37.500 0.00 0.00 0.00 3.68
105 106 8.938906 CAAAACTAAATCCATTTCCCATCTTTG 58.061 33.333 0.00 0.00 0.00 2.77
106 107 8.102676 CCAAAACTAAATCCATTTCCCATCTTT 58.897 33.333 0.00 0.00 0.00 2.52
107 108 7.623630 CCAAAACTAAATCCATTTCCCATCTT 58.376 34.615 0.00 0.00 0.00 2.40
108 109 6.352137 GCCAAAACTAAATCCATTTCCCATCT 60.352 38.462 0.00 0.00 0.00 2.90
109 110 5.817296 GCCAAAACTAAATCCATTTCCCATC 59.183 40.000 0.00 0.00 0.00 3.51
110 111 5.250313 TGCCAAAACTAAATCCATTTCCCAT 59.750 36.000 0.00 0.00 0.00 4.00
111 112 4.594920 TGCCAAAACTAAATCCATTTCCCA 59.405 37.500 0.00 0.00 0.00 4.37
112 113 5.159273 TGCCAAAACTAAATCCATTTCCC 57.841 39.130 0.00 0.00 0.00 3.97
113 114 6.463360 TCTTGCCAAAACTAAATCCATTTCC 58.537 36.000 0.00 0.00 0.00 3.13
114 115 7.118245 CCTTCTTGCCAAAACTAAATCCATTTC 59.882 37.037 0.00 0.00 0.00 2.17
115 116 6.936335 CCTTCTTGCCAAAACTAAATCCATTT 59.064 34.615 0.00 0.00 0.00 2.32
116 117 6.269769 TCCTTCTTGCCAAAACTAAATCCATT 59.730 34.615 0.00 0.00 0.00 3.16
117 118 5.779771 TCCTTCTTGCCAAAACTAAATCCAT 59.220 36.000 0.00 0.00 0.00 3.41
118 119 5.144100 TCCTTCTTGCCAAAACTAAATCCA 58.856 37.500 0.00 0.00 0.00 3.41
119 120 5.722021 TCCTTCTTGCCAAAACTAAATCC 57.278 39.130 0.00 0.00 0.00 3.01
120 121 6.642540 CAGTTCCTTCTTGCCAAAACTAAATC 59.357 38.462 0.00 0.00 0.00 2.17
121 122 6.462909 CCAGTTCCTTCTTGCCAAAACTAAAT 60.463 38.462 0.00 0.00 0.00 1.40
122 123 5.163457 CCAGTTCCTTCTTGCCAAAACTAAA 60.163 40.000 0.00 0.00 0.00 1.85
123 124 4.340950 CCAGTTCCTTCTTGCCAAAACTAA 59.659 41.667 0.00 0.00 0.00 2.24
124 125 3.888930 CCAGTTCCTTCTTGCCAAAACTA 59.111 43.478 0.00 0.00 0.00 2.24
125 126 2.695147 CCAGTTCCTTCTTGCCAAAACT 59.305 45.455 0.00 0.00 0.00 2.66
126 127 2.693074 TCCAGTTCCTTCTTGCCAAAAC 59.307 45.455 0.00 0.00 0.00 2.43
127 128 2.958355 CTCCAGTTCCTTCTTGCCAAAA 59.042 45.455 0.00 0.00 0.00 2.44
128 129 2.174639 TCTCCAGTTCCTTCTTGCCAAA 59.825 45.455 0.00 0.00 0.00 3.28
129 130 1.774254 TCTCCAGTTCCTTCTTGCCAA 59.226 47.619 0.00 0.00 0.00 4.52
130 131 1.434188 TCTCCAGTTCCTTCTTGCCA 58.566 50.000 0.00 0.00 0.00 4.92
131 132 2.568623 TTCTCCAGTTCCTTCTTGCC 57.431 50.000 0.00 0.00 0.00 4.52
132 133 2.675348 CGATTCTCCAGTTCCTTCTTGC 59.325 50.000 0.00 0.00 0.00 4.01
133 134 3.681897 CACGATTCTCCAGTTCCTTCTTG 59.318 47.826 0.00 0.00 0.00 3.02
134 135 3.325135 ACACGATTCTCCAGTTCCTTCTT 59.675 43.478 0.00 0.00 0.00 2.52
135 136 2.900546 ACACGATTCTCCAGTTCCTTCT 59.099 45.455 0.00 0.00 0.00 2.85
136 137 3.320673 ACACGATTCTCCAGTTCCTTC 57.679 47.619 0.00 0.00 0.00 3.46
137 138 3.368531 GCTACACGATTCTCCAGTTCCTT 60.369 47.826 0.00 0.00 0.00 3.36
138 139 2.166664 GCTACACGATTCTCCAGTTCCT 59.833 50.000 0.00 0.00 0.00 3.36
139 140 2.541556 GCTACACGATTCTCCAGTTCC 58.458 52.381 0.00 0.00 0.00 3.62
140 141 7.121861 GAAACGCTACACGATTCTCCAGTTC 62.122 48.000 0.00 0.00 46.56 3.01
141 142 5.379304 GAAACGCTACACGATTCTCCAGTT 61.379 45.833 0.00 0.00 46.56 3.16
142 143 3.917743 GAAACGCTACACGATTCTCCAGT 60.918 47.826 0.00 0.00 46.56 4.00
143 144 2.599082 GAAACGCTACACGATTCTCCAG 59.401 50.000 0.00 0.00 46.56 3.86
144 145 2.602878 GAAACGCTACACGATTCTCCA 58.397 47.619 0.00 0.00 46.56 3.86
153 154 1.226746 AAGTGCAGGAAACGCTACAC 58.773 50.000 0.00 0.00 0.00 2.90
154 155 2.823924 TAAGTGCAGGAAACGCTACA 57.176 45.000 0.00 0.00 0.00 2.74
155 156 5.789710 TTAATAAGTGCAGGAAACGCTAC 57.210 39.130 0.00 0.00 0.00 3.58
156 157 6.995511 ATTTAATAAGTGCAGGAAACGCTA 57.004 33.333 0.00 0.00 0.00 4.26
157 158 5.897377 ATTTAATAAGTGCAGGAAACGCT 57.103 34.783 0.00 0.00 0.00 5.07
158 159 7.913297 TGATTATTTAATAAGTGCAGGAAACGC 59.087 33.333 3.73 0.00 0.00 4.84
159 160 9.781834 TTGATTATTTAATAAGTGCAGGAAACG 57.218 29.630 3.73 0.00 0.00 3.60
162 163 9.474313 ACCTTGATTATTTAATAAGTGCAGGAA 57.526 29.630 15.78 0.00 0.00 3.36
163 164 9.474313 AACCTTGATTATTTAATAAGTGCAGGA 57.526 29.630 15.78 0.00 0.00 3.86
164 165 9.520204 CAACCTTGATTATTTAATAAGTGCAGG 57.480 33.333 3.73 8.01 0.00 4.85
172 173 9.233649 ACACCGAACAACCTTGATTATTTAATA 57.766 29.630 0.00 0.00 0.00 0.98
173 174 8.026607 CACACCGAACAACCTTGATTATTTAAT 58.973 33.333 0.00 0.00 0.00 1.40
174 175 7.364200 CACACCGAACAACCTTGATTATTTAA 58.636 34.615 0.00 0.00 0.00 1.52
175 176 6.568844 GCACACCGAACAACCTTGATTATTTA 60.569 38.462 0.00 0.00 0.00 1.40
176 177 5.768317 CACACCGAACAACCTTGATTATTT 58.232 37.500 0.00 0.00 0.00 1.40
177 178 4.320935 GCACACCGAACAACCTTGATTATT 60.321 41.667 0.00 0.00 0.00 1.40
178 179 3.190535 GCACACCGAACAACCTTGATTAT 59.809 43.478 0.00 0.00 0.00 1.28
179 180 2.550606 GCACACCGAACAACCTTGATTA 59.449 45.455 0.00 0.00 0.00 1.75
180 181 1.336755 GCACACCGAACAACCTTGATT 59.663 47.619 0.00 0.00 0.00 2.57
181 182 0.951558 GCACACCGAACAACCTTGAT 59.048 50.000 0.00 0.00 0.00 2.57
182 183 0.393132 TGCACACCGAACAACCTTGA 60.393 50.000 0.00 0.00 0.00 3.02
183 184 0.029300 CTGCACACCGAACAACCTTG 59.971 55.000 0.00 0.00 0.00 3.61
184 185 1.724582 GCTGCACACCGAACAACCTT 61.725 55.000 0.00 0.00 0.00 3.50
185 186 2.186826 GCTGCACACCGAACAACCT 61.187 57.895 0.00 0.00 0.00 3.50
186 187 2.331451 GCTGCACACCGAACAACC 59.669 61.111 0.00 0.00 0.00 3.77
187 188 1.841663 ATCGCTGCACACCGAACAAC 61.842 55.000 0.00 0.00 37.00 3.32
188 189 1.163420 AATCGCTGCACACCGAACAA 61.163 50.000 0.00 0.00 37.00 2.83
189 190 1.565156 GAATCGCTGCACACCGAACA 61.565 55.000 0.00 0.00 37.00 3.18
190 191 1.132640 GAATCGCTGCACACCGAAC 59.867 57.895 0.00 0.00 37.00 3.95
191 192 2.032634 GGAATCGCTGCACACCGAA 61.033 57.895 0.00 0.00 37.00 4.30
192 193 2.434185 GGAATCGCTGCACACCGA 60.434 61.111 0.00 2.38 37.91 4.69
193 194 2.434884 AGGAATCGCTGCACACCG 60.435 61.111 0.00 0.00 0.00 4.94
194 195 3.044059 GCAGGAATCGCTGCACACC 62.044 63.158 15.50 0.00 45.11 4.16
195 196 2.482374 GCAGGAATCGCTGCACAC 59.518 61.111 15.50 0.00 45.11 3.82
199 200 1.242076 ATAATGGCAGGAATCGCTGC 58.758 50.000 13.05 13.05 45.04 5.25
200 201 5.437289 TTTAATAATGGCAGGAATCGCTG 57.563 39.130 0.00 0.00 0.00 5.18
201 202 5.536161 ACATTTAATAATGGCAGGAATCGCT 59.464 36.000 0.00 0.00 44.42 4.93
202 203 5.772521 ACATTTAATAATGGCAGGAATCGC 58.227 37.500 0.00 0.00 44.42 4.58
203 204 7.424803 TGAACATTTAATAATGGCAGGAATCG 58.575 34.615 0.00 0.00 44.42 3.34
204 205 8.807667 CTGAACATTTAATAATGGCAGGAATC 57.192 34.615 0.00 0.00 44.42 2.52
209 210 5.069516 AGCCCTGAACATTTAATAATGGCAG 59.930 40.000 0.00 12.25 44.42 4.85
210 211 4.961730 AGCCCTGAACATTTAATAATGGCA 59.038 37.500 0.00 0.00 44.42 4.92
211 212 5.068987 TCAGCCCTGAACATTTAATAATGGC 59.931 40.000 0.00 0.00 39.02 4.40
212 213 6.713762 TCAGCCCTGAACATTTAATAATGG 57.286 37.500 0.00 0.00 39.02 3.16
213 214 7.041167 TCGATCAGCCCTGAACATTTAATAATG 60.041 37.037 1.62 0.00 43.58 1.90
214 215 6.998074 TCGATCAGCCCTGAACATTTAATAAT 59.002 34.615 1.62 0.00 43.58 1.28
215 216 6.353323 TCGATCAGCCCTGAACATTTAATAA 58.647 36.000 1.62 0.00 43.58 1.40
216 217 5.924356 TCGATCAGCCCTGAACATTTAATA 58.076 37.500 1.62 0.00 43.58 0.98
217 218 4.780815 TCGATCAGCCCTGAACATTTAAT 58.219 39.130 1.62 0.00 43.58 1.40
218 219 4.214986 TCGATCAGCCCTGAACATTTAA 57.785 40.909 1.62 0.00 43.58 1.52
219 220 3.904800 TCGATCAGCCCTGAACATTTA 57.095 42.857 1.62 0.00 43.58 1.40
220 221 2.787473 TCGATCAGCCCTGAACATTT 57.213 45.000 1.62 0.00 43.58 2.32
221 222 2.092753 ACATCGATCAGCCCTGAACATT 60.093 45.455 1.62 0.00 43.58 2.71
222 223 1.487976 ACATCGATCAGCCCTGAACAT 59.512 47.619 1.62 0.00 43.58 2.71
223 224 0.904649 ACATCGATCAGCCCTGAACA 59.095 50.000 1.62 0.00 43.58 3.18
224 225 1.293924 CACATCGATCAGCCCTGAAC 58.706 55.000 1.62 0.00 43.58 3.18
225 226 0.462581 GCACATCGATCAGCCCTGAA 60.463 55.000 1.62 0.00 43.58 3.02
226 227 1.144716 GCACATCGATCAGCCCTGA 59.855 57.895 0.00 0.00 44.59 3.86
227 228 0.745486 TTGCACATCGATCAGCCCTG 60.745 55.000 14.14 0.00 0.00 4.45
228 229 0.463295 CTTGCACATCGATCAGCCCT 60.463 55.000 14.14 0.00 0.00 5.19
229 230 0.745845 ACTTGCACATCGATCAGCCC 60.746 55.000 14.14 0.00 0.00 5.19
230 231 0.376152 CACTTGCACATCGATCAGCC 59.624 55.000 14.14 0.00 0.00 4.85
231 232 0.247974 GCACTTGCACATCGATCAGC 60.248 55.000 10.80 10.80 41.59 4.26
232 233 3.891786 GCACTTGCACATCGATCAG 57.108 52.632 0.00 0.00 41.59 2.90
250 251 1.664016 GCAGGAATCGTTGCACACTTG 60.664 52.381 3.93 0.00 40.02 3.16
251 252 0.593128 GCAGGAATCGTTGCACACTT 59.407 50.000 3.93 0.00 40.02 3.16
252 253 1.237285 GGCAGGAATCGTTGCACACT 61.237 55.000 9.86 0.00 42.02 3.55
253 254 1.210155 GGCAGGAATCGTTGCACAC 59.790 57.895 9.86 0.00 42.02 3.82
254 255 0.608856 ATGGCAGGAATCGTTGCACA 60.609 50.000 9.86 6.42 42.02 4.57
255 256 0.527565 AATGGCAGGAATCGTTGCAC 59.472 50.000 9.86 1.91 42.02 4.57
256 257 2.121291 TAATGGCAGGAATCGTTGCA 57.879 45.000 9.86 0.00 42.02 4.08
257 258 3.715628 AATAATGGCAGGAATCGTTGC 57.284 42.857 0.00 0.53 39.56 4.17
258 259 7.202526 ACATTTAATAATGGCAGGAATCGTTG 58.797 34.615 0.00 0.00 44.42 4.10
259 260 7.346751 ACATTTAATAATGGCAGGAATCGTT 57.653 32.000 0.00 0.00 44.42 3.85
260 261 6.959639 ACATTTAATAATGGCAGGAATCGT 57.040 33.333 0.00 0.00 44.42 3.73
261 262 6.578545 CGAACATTTAATAATGGCAGGAATCG 59.421 38.462 0.00 0.00 44.42 3.34
262 263 6.863126 CCGAACATTTAATAATGGCAGGAATC 59.137 38.462 0.00 0.00 44.42 2.52
263 264 6.323739 ACCGAACATTTAATAATGGCAGGAAT 59.676 34.615 0.00 0.00 44.42 3.01
264 265 5.654650 ACCGAACATTTAATAATGGCAGGAA 59.345 36.000 0.00 0.00 44.42 3.36
265 266 5.197451 ACCGAACATTTAATAATGGCAGGA 58.803 37.500 0.00 0.00 44.42 3.86
266 267 5.067153 TGACCGAACATTTAATAATGGCAGG 59.933 40.000 0.00 0.00 44.42 4.85
267 268 6.038161 TCTGACCGAACATTTAATAATGGCAG 59.962 38.462 0.00 0.00 44.42 4.85
268 269 5.883115 TCTGACCGAACATTTAATAATGGCA 59.117 36.000 0.00 0.00 44.42 4.92
269 270 6.371809 TCTGACCGAACATTTAATAATGGC 57.628 37.500 0.00 0.00 44.42 4.40
295 296 0.102481 AGATTTCGGTCCGGTCATCG 59.898 55.000 12.29 0.00 38.88 3.84
296 297 2.311124 AAGATTTCGGTCCGGTCATC 57.689 50.000 12.29 10.35 0.00 2.92
297 298 2.764572 ACTAAGATTTCGGTCCGGTCAT 59.235 45.455 12.29 0.69 0.00 3.06
298 299 2.094390 CACTAAGATTTCGGTCCGGTCA 60.094 50.000 12.29 0.00 0.00 4.02
299 300 2.537401 CACTAAGATTTCGGTCCGGTC 58.463 52.381 12.29 7.71 0.00 4.79
300 301 1.405121 GCACTAAGATTTCGGTCCGGT 60.405 52.381 12.29 0.00 0.00 5.28
301 302 1.287425 GCACTAAGATTTCGGTCCGG 58.713 55.000 12.29 0.00 0.00 5.14
302 303 0.921347 CGCACTAAGATTTCGGTCCG 59.079 55.000 4.39 4.39 0.00 4.79
303 304 1.287425 CCGCACTAAGATTTCGGTCC 58.713 55.000 0.00 0.00 35.75 4.46
306 307 2.004583 TGACCGCACTAAGATTTCGG 57.995 50.000 0.00 0.00 45.04 4.30
307 308 3.616821 TGAATGACCGCACTAAGATTTCG 59.383 43.478 0.00 0.00 0.00 3.46
308 309 5.557136 CGATGAATGACCGCACTAAGATTTC 60.557 44.000 0.00 0.00 0.00 2.17
309 310 4.271049 CGATGAATGACCGCACTAAGATTT 59.729 41.667 0.00 0.00 0.00 2.17
310 311 3.804325 CGATGAATGACCGCACTAAGATT 59.196 43.478 0.00 0.00 0.00 2.40
311 312 3.384668 CGATGAATGACCGCACTAAGAT 58.615 45.455 0.00 0.00 0.00 2.40
312 313 2.481276 CCGATGAATGACCGCACTAAGA 60.481 50.000 0.00 0.00 0.00 2.10
313 314 1.860950 CCGATGAATGACCGCACTAAG 59.139 52.381 0.00 0.00 0.00 2.18
314 315 1.206132 ACCGATGAATGACCGCACTAA 59.794 47.619 0.00 0.00 0.00 2.24
315 316 0.821517 ACCGATGAATGACCGCACTA 59.178 50.000 0.00 0.00 0.00 2.74
316 317 0.036388 AACCGATGAATGACCGCACT 60.036 50.000 0.00 0.00 0.00 4.40
317 318 0.802494 AAACCGATGAATGACCGCAC 59.198 50.000 0.00 0.00 0.00 5.34
318 319 0.801872 CAAACCGATGAATGACCGCA 59.198 50.000 0.00 0.00 0.00 5.69
319 320 0.802494 ACAAACCGATGAATGACCGC 59.198 50.000 0.00 0.00 0.00 5.68
320 321 1.465689 GCACAAACCGATGAATGACCG 60.466 52.381 0.00 0.00 0.00 4.79
321 322 1.812571 AGCACAAACCGATGAATGACC 59.187 47.619 0.00 0.00 0.00 4.02
322 323 2.744202 AGAGCACAAACCGATGAATGAC 59.256 45.455 0.00 0.00 0.00 3.06
323 324 3.057969 AGAGCACAAACCGATGAATGA 57.942 42.857 0.00 0.00 0.00 2.57
324 325 3.837213 AAGAGCACAAACCGATGAATG 57.163 42.857 0.00 0.00 0.00 2.67
325 326 3.191371 GGAAAGAGCACAAACCGATGAAT 59.809 43.478 0.00 0.00 0.00 2.57
326 327 2.552315 GGAAAGAGCACAAACCGATGAA 59.448 45.455 0.00 0.00 0.00 2.57
327 328 2.151202 GGAAAGAGCACAAACCGATGA 58.849 47.619 0.00 0.00 0.00 2.92
328 329 1.879380 TGGAAAGAGCACAAACCGATG 59.121 47.619 0.00 0.00 0.00 3.84
329 330 2.270352 TGGAAAGAGCACAAACCGAT 57.730 45.000 0.00 0.00 0.00 4.18
330 331 2.270352 ATGGAAAGAGCACAAACCGA 57.730 45.000 0.00 0.00 0.00 4.69
331 332 2.293122 TCAATGGAAAGAGCACAAACCG 59.707 45.455 0.00 0.00 0.00 4.44
332 333 3.552890 GGTCAATGGAAAGAGCACAAACC 60.553 47.826 0.00 0.00 32.77 3.27
333 334 3.642705 GGTCAATGGAAAGAGCACAAAC 58.357 45.455 0.00 0.00 32.77 2.93
334 335 2.293122 CGGTCAATGGAAAGAGCACAAA 59.707 45.455 0.00 0.00 32.77 2.83
335 336 1.879380 CGGTCAATGGAAAGAGCACAA 59.121 47.619 0.00 0.00 32.77 3.33
336 337 1.071542 TCGGTCAATGGAAAGAGCACA 59.928 47.619 0.00 0.00 32.77 4.57
337 338 1.808411 TCGGTCAATGGAAAGAGCAC 58.192 50.000 0.00 0.00 32.77 4.40
338 339 2.632377 GATCGGTCAATGGAAAGAGCA 58.368 47.619 0.00 0.00 32.77 4.26
339 340 1.594862 CGATCGGTCAATGGAAAGAGC 59.405 52.381 7.38 0.00 0.00 4.09
340 341 2.205074 CCGATCGGTCAATGGAAAGAG 58.795 52.381 26.35 0.00 0.00 2.85
341 342 2.309528 CCGATCGGTCAATGGAAAGA 57.690 50.000 26.35 0.00 0.00 2.52
358 359 0.871722 TTGTCCAAAATCGCTGACCG 59.128 50.000 0.00 0.00 38.61 4.79
359 360 1.068541 GGTTGTCCAAAATCGCTGACC 60.069 52.381 0.00 0.00 0.00 4.02
360 361 1.399727 CGGTTGTCCAAAATCGCTGAC 60.400 52.381 0.00 0.00 0.00 3.51
361 362 0.871722 CGGTTGTCCAAAATCGCTGA 59.128 50.000 0.00 0.00 0.00 4.26
362 363 0.871722 TCGGTTGTCCAAAATCGCTG 59.128 50.000 0.00 0.00 0.00 5.18
363 364 1.600023 TTCGGTTGTCCAAAATCGCT 58.400 45.000 0.00 0.00 0.00 4.93
364 365 2.409152 TTTCGGTTGTCCAAAATCGC 57.591 45.000 0.00 0.00 0.00 4.58
365 366 5.898630 AAAATTTCGGTTGTCCAAAATCG 57.101 34.783 0.00 0.00 0.00 3.34
366 367 7.240414 TCAAAAATTTCGGTTGTCCAAAATC 57.760 32.000 0.00 0.00 0.00 2.17
367 368 7.617041 TTCAAAAATTTCGGTTGTCCAAAAT 57.383 28.000 0.00 0.00 0.00 1.82
368 369 7.387948 TCTTTCAAAAATTTCGGTTGTCCAAAA 59.612 29.630 0.00 0.00 0.00 2.44
369 370 6.874134 TCTTTCAAAAATTTCGGTTGTCCAAA 59.126 30.769 0.00 0.00 0.00 3.28
370 371 6.311690 GTCTTTCAAAAATTTCGGTTGTCCAA 59.688 34.615 0.00 0.00 0.00 3.53
371 372 5.808030 GTCTTTCAAAAATTTCGGTTGTCCA 59.192 36.000 0.00 0.00 0.00 4.02
372 373 5.233476 GGTCTTTCAAAAATTTCGGTTGTCC 59.767 40.000 0.00 0.00 0.00 4.02
373 374 5.051973 CGGTCTTTCAAAAATTTCGGTTGTC 60.052 40.000 0.00 0.00 0.00 3.18
374 375 4.801516 CGGTCTTTCAAAAATTTCGGTTGT 59.198 37.500 0.00 0.00 0.00 3.32
375 376 5.038033 TCGGTCTTTCAAAAATTTCGGTTG 58.962 37.500 0.00 0.00 0.00 3.77
376 377 5.251601 TCGGTCTTTCAAAAATTTCGGTT 57.748 34.783 0.00 0.00 0.00 4.44
377 378 4.904253 TCGGTCTTTCAAAAATTTCGGT 57.096 36.364 0.00 0.00 0.00 4.69
378 379 4.148174 GCTTCGGTCTTTCAAAAATTTCGG 59.852 41.667 0.00 0.00 0.00 4.30
379 380 4.737765 TGCTTCGGTCTTTCAAAAATTTCG 59.262 37.500 0.00 0.00 0.00 3.46
380 381 5.051039 GGTGCTTCGGTCTTTCAAAAATTTC 60.051 40.000 0.00 0.00 0.00 2.17
381 382 4.808895 GGTGCTTCGGTCTTTCAAAAATTT 59.191 37.500 0.00 0.00 0.00 1.82
382 383 4.368315 GGTGCTTCGGTCTTTCAAAAATT 58.632 39.130 0.00 0.00 0.00 1.82
383 384 3.550030 CGGTGCTTCGGTCTTTCAAAAAT 60.550 43.478 0.00 0.00 0.00 1.82
384 385 2.223386 CGGTGCTTCGGTCTTTCAAAAA 60.223 45.455 0.00 0.00 0.00 1.94
385 386 1.332375 CGGTGCTTCGGTCTTTCAAAA 59.668 47.619 0.00 0.00 0.00 2.44
386 387 0.941542 CGGTGCTTCGGTCTTTCAAA 59.058 50.000 0.00 0.00 0.00 2.69
387 388 0.105224 TCGGTGCTTCGGTCTTTCAA 59.895 50.000 0.01 0.00 0.00 2.69
388 389 0.599204 GTCGGTGCTTCGGTCTTTCA 60.599 55.000 0.01 0.00 0.00 2.69
389 390 1.289800 GGTCGGTGCTTCGGTCTTTC 61.290 60.000 0.01 0.00 0.00 2.62
390 391 1.301479 GGTCGGTGCTTCGGTCTTT 60.301 57.895 0.01 0.00 0.00 2.52
391 392 2.342648 GGTCGGTGCTTCGGTCTT 59.657 61.111 0.01 0.00 0.00 3.01
392 393 3.692406 GGGTCGGTGCTTCGGTCT 61.692 66.667 0.01 0.00 0.00 3.85
395 396 4.367023 TTCGGGTCGGTGCTTCGG 62.367 66.667 0.01 0.00 0.00 4.30
396 397 3.110178 GTTCGGGTCGGTGCTTCG 61.110 66.667 0.00 0.00 0.00 3.79
397 398 3.110178 CGTTCGGGTCGGTGCTTC 61.110 66.667 0.00 0.00 0.00 3.86
398 399 4.675029 CCGTTCGGGTCGGTGCTT 62.675 66.667 3.04 0.00 42.62 3.91
426 427 4.530857 CTAGGGCTGGGCGTTCGG 62.531 72.222 0.00 0.00 0.00 4.30
427 428 4.530857 CCTAGGGCTGGGCGTTCG 62.531 72.222 0.00 0.00 0.00 3.95
480 483 3.752339 CTTCTTGCTTGGGCGCCC 61.752 66.667 39.40 39.40 42.25 6.13
566 569 1.739562 CTCGTGCTCCTTGCTGTCC 60.740 63.158 0.00 0.00 43.37 4.02
570 573 2.659610 GTCCTCGTGCTCCTTGCT 59.340 61.111 0.00 0.00 43.37 3.91
573 576 0.832135 TTCTGGTCCTCGTGCTCCTT 60.832 55.000 0.00 0.00 0.00 3.36
777 780 3.409856 GCTGCACGCGGATGTAAT 58.590 55.556 12.47 0.00 0.00 1.89
853 856 2.048503 GTGCGTCCGCCTTGTAGT 60.049 61.111 9.43 0.00 41.09 2.73
890 893 4.865365 CGAAGAAGTATTGTCCTGACCTTC 59.135 45.833 6.12 6.12 0.00 3.46
899 902 2.033662 GCATCGCCGAAGAAGTATTGTC 60.034 50.000 0.00 0.00 0.00 3.18
933 945 5.999205 ATTTGGAAGCCACAAACATATGA 57.001 34.783 10.38 0.00 40.25 2.15
954 989 6.762661 CAGGGTTGAAAGTTGAAACATGAAAT 59.237 34.615 0.00 0.00 0.00 2.17
955 990 6.105333 CAGGGTTGAAAGTTGAAACATGAAA 58.895 36.000 0.00 0.00 0.00 2.69
956 991 5.395103 CCAGGGTTGAAAGTTGAAACATGAA 60.395 40.000 0.00 0.00 0.00 2.57
957 992 4.099266 CCAGGGTTGAAAGTTGAAACATGA 59.901 41.667 0.00 0.00 0.00 3.07
958 993 4.141959 ACCAGGGTTGAAAGTTGAAACATG 60.142 41.667 0.00 0.00 0.00 3.21
959 994 4.030216 ACCAGGGTTGAAAGTTGAAACAT 58.970 39.130 0.00 0.00 0.00 2.71
960 995 3.436243 ACCAGGGTTGAAAGTTGAAACA 58.564 40.909 0.00 0.00 0.00 2.83
961 996 3.488553 CGACCAGGGTTGAAAGTTGAAAC 60.489 47.826 0.00 0.00 0.00 2.78
968 1003 2.289694 ACAGATCGACCAGGGTTGAAAG 60.290 50.000 12.27 7.87 41.33 2.62
980 1015 1.406898 TGCATCAGGAGACAGATCGAC 59.593 52.381 0.00 0.00 33.83 4.20
1065 1104 4.761739 CGTGGTAGGACGGAGGTAATTATA 59.238 45.833 0.00 0.00 35.65 0.98
1066 1105 3.571401 CGTGGTAGGACGGAGGTAATTAT 59.429 47.826 0.00 0.00 35.65 1.28
1067 1106 2.951642 CGTGGTAGGACGGAGGTAATTA 59.048 50.000 0.00 0.00 35.65 1.40
1068 1107 1.753073 CGTGGTAGGACGGAGGTAATT 59.247 52.381 0.00 0.00 35.65 1.40
1069 1108 1.396653 CGTGGTAGGACGGAGGTAAT 58.603 55.000 0.00 0.00 35.65 1.89
1070 1109 2.872408 CGTGGTAGGACGGAGGTAA 58.128 57.895 0.00 0.00 35.65 2.85
1071 1110 4.643795 CGTGGTAGGACGGAGGTA 57.356 61.111 0.00 0.00 35.65 3.08
1155 1194 1.208614 GCTCTTGCTGAAGGCGTTG 59.791 57.895 0.00 0.00 45.43 4.10
1181 1220 1.663702 CGGTGGAACGTGTGGTCTC 60.664 63.158 0.00 0.00 38.12 3.36
1267 1314 1.666872 CCTTGAACCCGTCACGGTC 60.667 63.158 16.87 7.78 46.80 4.79
1268 1315 2.424302 CCTTGAACCCGTCACGGT 59.576 61.111 16.87 0.00 46.80 4.83
1270 1317 2.604174 GCACCTTGAACCCGTCACG 61.604 63.158 0.00 0.00 35.39 4.35
1271 1318 1.227853 AGCACCTTGAACCCGTCAC 60.228 57.895 0.00 0.00 35.39 3.67
1439 1676 2.107204 AGCTTCACCTCACTTGACCAAT 59.893 45.455 0.00 0.00 0.00 3.16
1569 1810 1.645710 TTCCACTTGAGTCCTCCTCC 58.354 55.000 0.00 0.00 39.65 4.30
1570 1811 2.368875 TGTTTCCACTTGAGTCCTCCTC 59.631 50.000 0.00 0.00 40.89 3.71
1571 1812 2.104963 GTGTTTCCACTTGAGTCCTCCT 59.895 50.000 0.00 0.00 38.61 3.69
1680 1924 3.380320 AGGCGCATAAAAATACCAAGGTC 59.620 43.478 10.83 0.00 0.00 3.85
1682 1926 3.243401 GGAGGCGCATAAAAATACCAAGG 60.243 47.826 10.83 0.00 0.00 3.61
1684 1928 2.356382 CGGAGGCGCATAAAAATACCAA 59.644 45.455 10.83 0.00 0.00 3.67
1830 2086 8.260114 TCAAAAGTGCTCATGTATCTATCTTCA 58.740 33.333 0.00 0.00 0.00 3.02
1845 2101 2.224018 TGGTGCCAATTCAAAAGTGCTC 60.224 45.455 0.00 0.00 0.00 4.26
1885 2144 7.763356 TGTCTTGTCTAAAATGAACGGAAAAA 58.237 30.769 0.00 0.00 0.00 1.94
1887 2146 6.928979 TGTCTTGTCTAAAATGAACGGAAA 57.071 33.333 0.00 0.00 0.00 3.13
1891 2150 8.614994 AAAAGTTGTCTTGTCTAAAATGAACG 57.385 30.769 0.00 0.00 33.79 3.95
1994 2253 9.250624 CTAGAAGATATCCCTGTTTTTCGTAAG 57.749 37.037 0.00 0.00 0.00 2.34
1995 2254 7.709613 GCTAGAAGATATCCCTGTTTTTCGTAA 59.290 37.037 0.00 0.00 0.00 3.18
1996 2255 7.147794 TGCTAGAAGATATCCCTGTTTTTCGTA 60.148 37.037 0.00 0.00 0.00 3.43
1997 2256 6.049790 GCTAGAAGATATCCCTGTTTTTCGT 58.950 40.000 0.00 0.00 0.00 3.85
1998 2257 6.049149 TGCTAGAAGATATCCCTGTTTTTCG 58.951 40.000 0.00 0.00 0.00 3.46
1999 2258 8.457238 AATGCTAGAAGATATCCCTGTTTTTC 57.543 34.615 0.00 0.00 0.00 2.29
2000 2259 8.277918 AGAATGCTAGAAGATATCCCTGTTTTT 58.722 33.333 0.00 0.00 0.00 1.94
2001 2260 7.810260 AGAATGCTAGAAGATATCCCTGTTTT 58.190 34.615 0.00 0.00 0.00 2.43
2002 2261 7.385894 AGAATGCTAGAAGATATCCCTGTTT 57.614 36.000 0.00 0.00 0.00 2.83
2003 2262 7.385894 AAGAATGCTAGAAGATATCCCTGTT 57.614 36.000 0.00 0.00 0.00 3.16
2004 2263 7.385894 AAAGAATGCTAGAAGATATCCCTGT 57.614 36.000 0.00 0.00 0.00 4.00
2005 2264 9.598517 GATAAAGAATGCTAGAAGATATCCCTG 57.401 37.037 0.00 0.00 0.00 4.45
2006 2265 8.474025 CGATAAAGAATGCTAGAAGATATCCCT 58.526 37.037 0.00 0.00 0.00 4.20
2007 2266 8.470805 TCGATAAAGAATGCTAGAAGATATCCC 58.529 37.037 0.00 0.00 0.00 3.85
2008 2267 9.862371 TTCGATAAAGAATGCTAGAAGATATCC 57.138 33.333 0.00 0.00 0.00 2.59
2026 2285 9.811995 AGCAAACACATACTAGTATTCGATAAA 57.188 29.630 12.87 0.00 0.00 1.40
2027 2286 9.244799 CAGCAAACACATACTAGTATTCGATAA 57.755 33.333 12.87 0.00 0.00 1.75
2028 2287 8.626526 TCAGCAAACACATACTAGTATTCGATA 58.373 33.333 12.87 0.00 0.00 2.92
2029 2288 7.489160 TCAGCAAACACATACTAGTATTCGAT 58.511 34.615 12.87 0.00 0.00 3.59
2030 2289 6.859017 TCAGCAAACACATACTAGTATTCGA 58.141 36.000 12.87 0.00 0.00 3.71
2031 2290 7.700322 ATCAGCAAACACATACTAGTATTCG 57.300 36.000 12.87 9.32 0.00 3.34
2033 2292 9.494271 CCATATCAGCAAACACATACTAGTATT 57.506 33.333 12.87 2.65 0.00 1.89
2034 2293 8.870116 TCCATATCAGCAAACACATACTAGTAT 58.130 33.333 9.71 9.71 0.00 2.12
2035 2294 8.245195 TCCATATCAGCAAACACATACTAGTA 57.755 34.615 4.77 4.77 0.00 1.82
2036 2295 7.124573 TCCATATCAGCAAACACATACTAGT 57.875 36.000 0.00 0.00 0.00 2.57
2037 2296 8.613060 ATTCCATATCAGCAAACACATACTAG 57.387 34.615 0.00 0.00 0.00 2.57
2038 2297 8.978874 AATTCCATATCAGCAAACACATACTA 57.021 30.769 0.00 0.00 0.00 1.82
2039 2298 7.886629 AATTCCATATCAGCAAACACATACT 57.113 32.000 0.00 0.00 0.00 2.12
2040 2299 8.931385 AAAATTCCATATCAGCAAACACATAC 57.069 30.769 0.00 0.00 0.00 2.39
2041 2300 8.970020 AGAAAATTCCATATCAGCAAACACATA 58.030 29.630 0.00 0.00 0.00 2.29
2042 2301 7.762615 CAGAAAATTCCATATCAGCAAACACAT 59.237 33.333 0.00 0.00 0.00 3.21
2043 2302 7.039853 TCAGAAAATTCCATATCAGCAAACACA 60.040 33.333 0.00 0.00 0.00 3.72
2044 2303 7.315142 TCAGAAAATTCCATATCAGCAAACAC 58.685 34.615 0.00 0.00 0.00 3.32
2045 2304 7.465353 TCAGAAAATTCCATATCAGCAAACA 57.535 32.000 0.00 0.00 0.00 2.83
2046 2305 7.437267 CCATCAGAAAATTCCATATCAGCAAAC 59.563 37.037 0.00 0.00 0.00 2.93
2047 2306 7.342541 TCCATCAGAAAATTCCATATCAGCAAA 59.657 33.333 0.00 0.00 0.00 3.68
2048 2307 6.834969 TCCATCAGAAAATTCCATATCAGCAA 59.165 34.615 0.00 0.00 0.00 3.91
2049 2308 6.367161 TCCATCAGAAAATTCCATATCAGCA 58.633 36.000 0.00 0.00 0.00 4.41
2050 2309 6.889301 TCCATCAGAAAATTCCATATCAGC 57.111 37.500 0.00 0.00 0.00 4.26
2063 2322 6.729690 ACAATGACCTTTTTCCATCAGAAA 57.270 33.333 0.00 0.00 42.82 2.52
2064 2323 7.004086 ACTACAATGACCTTTTTCCATCAGAA 58.996 34.615 0.00 0.00 0.00 3.02
2065 2324 6.542821 ACTACAATGACCTTTTTCCATCAGA 58.457 36.000 0.00 0.00 0.00 3.27
2066 2325 6.824305 ACTACAATGACCTTTTTCCATCAG 57.176 37.500 0.00 0.00 0.00 2.90
2067 2326 7.942341 ACTAACTACAATGACCTTTTTCCATCA 59.058 33.333 0.00 0.00 0.00 3.07
2068 2327 8.336801 ACTAACTACAATGACCTTTTTCCATC 57.663 34.615 0.00 0.00 0.00 3.51
2069 2328 8.576442 CAACTAACTACAATGACCTTTTTCCAT 58.424 33.333 0.00 0.00 0.00 3.41
2070 2329 7.558444 ACAACTAACTACAATGACCTTTTTCCA 59.442 33.333 0.00 0.00 0.00 3.53
2071 2330 7.937649 ACAACTAACTACAATGACCTTTTTCC 58.062 34.615 0.00 0.00 0.00 3.13
2072 2331 8.837389 AGACAACTAACTACAATGACCTTTTTC 58.163 33.333 0.00 0.00 0.00 2.29
2073 2332 8.621286 CAGACAACTAACTACAATGACCTTTTT 58.379 33.333 0.00 0.00 0.00 1.94
2074 2333 7.228706 CCAGACAACTAACTACAATGACCTTTT 59.771 37.037 0.00 0.00 0.00 2.27
2075 2334 6.710744 CCAGACAACTAACTACAATGACCTTT 59.289 38.462 0.00 0.00 0.00 3.11
2076 2335 6.183361 ACCAGACAACTAACTACAATGACCTT 60.183 38.462 0.00 0.00 0.00 3.50
2077 2336 5.307196 ACCAGACAACTAACTACAATGACCT 59.693 40.000 0.00 0.00 0.00 3.85
2078 2337 5.548406 ACCAGACAACTAACTACAATGACC 58.452 41.667 0.00 0.00 0.00 4.02
2079 2338 7.225931 TGAAACCAGACAACTAACTACAATGAC 59.774 37.037 0.00 0.00 0.00 3.06
2080 2339 7.276658 TGAAACCAGACAACTAACTACAATGA 58.723 34.615 0.00 0.00 0.00 2.57
2081 2340 7.490962 TGAAACCAGACAACTAACTACAATG 57.509 36.000 0.00 0.00 0.00 2.82
2082 2341 7.308589 GCATGAAACCAGACAACTAACTACAAT 60.309 37.037 0.00 0.00 0.00 2.71
2083 2342 6.017440 GCATGAAACCAGACAACTAACTACAA 60.017 38.462 0.00 0.00 0.00 2.41
2084 2343 5.468746 GCATGAAACCAGACAACTAACTACA 59.531 40.000 0.00 0.00 0.00 2.74
2085 2344 5.701290 AGCATGAAACCAGACAACTAACTAC 59.299 40.000 0.00 0.00 0.00 2.73
2086 2345 5.865085 AGCATGAAACCAGACAACTAACTA 58.135 37.500 0.00 0.00 0.00 2.24
2087 2346 4.718961 AGCATGAAACCAGACAACTAACT 58.281 39.130 0.00 0.00 0.00 2.24
2088 2347 5.438761 AAGCATGAAACCAGACAACTAAC 57.561 39.130 0.00 0.00 0.00 2.34
2089 2348 6.714810 ACATAAGCATGAAACCAGACAACTAA 59.285 34.615 0.00 0.00 35.96 2.24
2090 2349 6.237901 ACATAAGCATGAAACCAGACAACTA 58.762 36.000 0.00 0.00 35.96 2.24
2091 2350 5.072741 ACATAAGCATGAAACCAGACAACT 58.927 37.500 0.00 0.00 35.96 3.16
2092 2351 5.376854 ACATAAGCATGAAACCAGACAAC 57.623 39.130 0.00 0.00 35.96 3.32
2093 2352 6.939730 TCTAACATAAGCATGAAACCAGACAA 59.060 34.615 0.00 0.00 35.96 3.18
2094 2353 6.472016 TCTAACATAAGCATGAAACCAGACA 58.528 36.000 0.00 0.00 35.96 3.41
2095 2354 6.985188 TCTAACATAAGCATGAAACCAGAC 57.015 37.500 0.00 0.00 35.96 3.51
2096 2355 9.679661 TTATTCTAACATAAGCATGAAACCAGA 57.320 29.630 0.00 0.00 35.96 3.86
2099 2358 9.516314 GGTTTATTCTAACATAAGCATGAAACC 57.484 33.333 0.00 0.00 35.96 3.27
2105 2364 9.067986 GCCTAAGGTTTATTCTAACATAAGCAT 57.932 33.333 0.00 0.00 0.00 3.79
2106 2365 8.050325 TGCCTAAGGTTTATTCTAACATAAGCA 58.950 33.333 0.00 0.00 0.00 3.91
2107 2366 8.446599 TGCCTAAGGTTTATTCTAACATAAGC 57.553 34.615 0.00 0.00 0.00 3.09
2124 2383 1.208535 TGACCAACGGTATGCCTAAGG 59.791 52.381 0.00 0.00 35.25 2.69
2141 2400 0.036388 TTGCTTGGTCCTCGGATGAC 60.036 55.000 5.01 5.01 0.00 3.06
2166 2425 0.317160 AAATCTCGGTGTCGTGCTCA 59.683 50.000 0.00 0.00 37.69 4.26
2192 2452 5.367937 AGATGTAGCCATATCAGTGAACCTT 59.632 40.000 0.00 0.00 0.00 3.50
2201 2461 2.179427 CCCGGAGATGTAGCCATATCA 58.821 52.381 0.73 0.00 40.36 2.15
2253 2513 0.391395 CCGGGTGCGGTATTGTAACA 60.391 55.000 0.00 0.00 0.00 2.41
2338 2598 2.433239 GGGGGTAGACACACGATGTAAT 59.567 50.000 0.00 0.00 43.56 1.89
2645 2906 8.220755 ACTTAATTTTGCTTGAGTGTTGACTA 57.779 30.769 0.00 0.00 30.16 2.59
2729 2990 1.202348 CACGCAGGTCAGTGATCAGTA 59.798 52.381 6.10 0.00 40.56 2.74
2753 3014 4.947388 ACGCCCAATATGTGAGTTGTTTAT 59.053 37.500 0.00 0.00 0.00 1.40
2755 3016 3.153919 ACGCCCAATATGTGAGTTGTTT 58.846 40.909 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.