Multiple sequence alignment - TraesCS5D01G409900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G409900 chr5D 100.000 5955 0 0 1 5955 473351762 473357716 0.000000e+00 10997.0
1 TraesCS5D01G409900 chr5D 83.176 636 78 14 9 625 526823616 526824241 6.740000e-154 555.0
2 TraesCS5D01G409900 chr5D 80.651 584 77 13 3 564 9032689 9032120 2.570000e-113 420.0
3 TraesCS5D01G409900 chr5D 78.956 594 99 15 107 680 218854583 218853996 1.210000e-101 381.0
4 TraesCS5D01G409900 chr5D 96.104 77 3 0 2494 2570 206601260 206601336 6.270000e-25 126.0
5 TraesCS5D01G409900 chr5D 96.774 62 1 1 2569 2630 206601287 206601347 1.060000e-17 102.0
6 TraesCS5D01G409900 chr5A 90.373 1527 95 25 3738 5251 593170190 593171677 0.000000e+00 1958.0
7 TraesCS5D01G409900 chr5A 88.879 1178 59 31 738 1903 593161982 593163099 0.000000e+00 1384.0
8 TraesCS5D01G409900 chr5A 94.043 789 22 10 2754 3540 593169435 593170200 0.000000e+00 1173.0
9 TraesCS5D01G409900 chr5A 94.697 528 18 4 1896 2418 593163519 593164041 0.000000e+00 811.0
10 TraesCS5D01G409900 chr5A 92.308 325 21 2 5632 5955 593172144 593172465 5.440000e-125 459.0
11 TraesCS5D01G409900 chr5A 86.897 290 25 6 5352 5636 593171832 593172113 4.480000e-81 313.0
12 TraesCS5D01G409900 chr5A 76.541 584 91 21 3 564 682612760 682612201 1.630000e-70 278.0
13 TraesCS5D01G409900 chr5A 93.284 134 9 0 2627 2760 593164223 593164356 1.310000e-46 198.0
14 TraesCS5D01G409900 chr5B 92.881 1194 45 16 725 1903 580681325 580682493 0.000000e+00 1698.0
15 TraesCS5D01G409900 chr5B 92.247 1019 56 14 4243 5251 580684819 580685824 0.000000e+00 1423.0
16 TraesCS5D01G409900 chr5B 92.385 696 40 7 2627 3319 580683594 580684279 0.000000e+00 979.0
17 TraesCS5D01G409900 chr5B 93.617 564 17 7 1896 2454 580682920 580683469 0.000000e+00 824.0
18 TraesCS5D01G409900 chr5B 88.546 454 31 7 5507 5955 580686043 580686480 1.140000e-146 531.0
19 TraesCS5D01G409900 chr5B 91.317 357 24 2 3859 4215 580684484 580684833 1.160000e-131 481.0
20 TraesCS5D01G409900 chr5B 81.864 590 66 21 45 607 13092273 13092848 5.440000e-125 459.0
21 TraesCS5D01G409900 chr5B 97.630 211 5 0 3350 3560 580684278 580684488 4.390000e-96 363.0
22 TraesCS5D01G409900 chr5B 84.028 144 12 6 2496 2630 146809706 146809565 1.740000e-25 128.0
23 TraesCS5D01G409900 chr5B 96.154 78 2 1 2494 2570 710758656 710758579 6.270000e-25 126.0
24 TraesCS5D01G409900 chr5B 100.000 30 0 0 5323 5352 580685950 580685921 8.340000e-04 56.5
25 TraesCS5D01G409900 chr3A 96.198 605 23 0 920 1524 689756653 689756049 0.000000e+00 990.0
26 TraesCS5D01G409900 chr3A 96.154 78 3 0 2493 2570 43293471 43293394 1.740000e-25 128.0
27 TraesCS5D01G409900 chr2A 94.711 605 32 0 920 1524 269270445 269269841 0.000000e+00 941.0
28 TraesCS5D01G409900 chr2A 94.711 605 32 0 920 1524 269308219 269307615 0.000000e+00 941.0
29 TraesCS5D01G409900 chr1D 83.357 715 82 18 3 686 62440074 62440782 1.410000e-175 627.0
30 TraesCS5D01G409900 chr1D 81.507 584 86 14 122 687 606621 607200 1.510000e-125 460.0
31 TraesCS5D01G409900 chr1D 98.649 74 1 0 2497 2570 291792042 291791969 1.350000e-26 132.0
32 TraesCS5D01G409900 chr1D 96.154 78 1 2 2494 2570 291791955 291792031 6.270000e-25 126.0
33 TraesCS5D01G409900 chr1D 96.774 62 1 1 2569 2630 291792018 291791958 1.060000e-17 102.0
34 TraesCS5D01G409900 chr6D 82.783 697 86 14 3 668 433361816 433362509 5.140000e-165 592.0
35 TraesCS5D01G409900 chr6D 78.236 703 114 27 3 687 363321920 363322601 1.190000e-111 414.0
36 TraesCS5D01G409900 chr6D 92.754 69 3 2 2569 2636 271737265 271737198 1.370000e-16 99.0
37 TraesCS5D01G409900 chr7B 82.117 699 91 19 3 670 664315812 664316507 8.660000e-158 568.0
38 TraesCS5D01G409900 chr7B 92.857 70 3 2 2569 2638 99367429 99367496 3.800000e-17 100.0
39 TraesCS5D01G409900 chr4D 81.523 709 98 11 3 681 484586815 484587520 2.430000e-153 553.0
40 TraesCS5D01G409900 chr7A 81.143 700 99 19 3 673 724630808 724630113 1.140000e-146 531.0
41 TraesCS5D01G409900 chr3D 80.818 709 103 16 1 679 5414300 5415005 5.290000e-145 525.0
42 TraesCS5D01G409900 chr3D 77.449 541 99 15 88 607 284956313 284955775 9.700000e-78 302.0
43 TraesCS5D01G409900 chr3D 98.649 74 1 0 2497 2570 261572040 261571967 1.350000e-26 132.0
44 TraesCS5D01G409900 chr3B 81.426 673 93 19 20 664 10633411 10634079 6.840000e-144 521.0
45 TraesCS5D01G409900 chr7D 78.541 713 114 20 3 687 74955226 74954525 3.300000e-117 433.0
46 TraesCS5D01G409900 chr7D 83.367 493 53 16 238 703 628536167 628536657 4.260000e-116 429.0
47 TraesCS5D01G409900 chr7D 78.509 684 103 21 3 647 94667022 94667700 5.560000e-110 409.0
48 TraesCS5D01G409900 chr7D 78.298 470 70 18 8 452 635311577 635311115 2.110000e-69 274.0
49 TraesCS5D01G409900 chr4B 81.550 542 80 8 186 709 126591461 126592000 4.260000e-116 429.0
50 TraesCS5D01G409900 chr4B 79.658 585 78 19 3 564 51129063 51128497 3.370000e-102 383.0
51 TraesCS5D01G409900 chr4B 92.754 69 3 2 2569 2636 201334325 201334258 1.370000e-16 99.0
52 TraesCS5D01G409900 chr1B 80.272 588 87 17 3 564 538462868 538463452 3.320000e-112 416.0
53 TraesCS5D01G409900 chr2B 79.897 388 52 15 3 367 107567711 107568095 1.650000e-65 261.0
54 TraesCS5D01G409900 chr2B 83.182 220 25 6 3 210 236593561 236593780 2.190000e-44 191.0
55 TraesCS5D01G409900 chr2B 95.312 64 2 1 2569 2632 511275946 511275884 3.800000e-17 100.0
56 TraesCS5D01G409900 chr1A 88.732 142 11 3 2495 2635 554278662 554278525 1.030000e-37 169.0
57 TraesCS5D01G409900 chr1A 98.649 74 1 0 2497 2570 38881581 38881654 1.350000e-26 132.0
58 TraesCS5D01G409900 chrUn 97.368 76 2 0 2495 2570 64964621 64964546 4.840000e-26 130.0
59 TraesCS5D01G409900 chr6A 93.846 65 3 1 2569 2633 586769117 586769180 4.910000e-16 97.1
60 TraesCS5D01G409900 chr2D 80.000 125 15 4 29 143 108931154 108931030 3.820000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G409900 chr5D 473351762 473357716 5954 False 10997.000000 10997 100.000000 1 5955 1 chr5D.!!$F1 5954
1 TraesCS5D01G409900 chr5D 526823616 526824241 625 False 555.000000 555 83.176000 9 625 1 chr5D.!!$F2 616
2 TraesCS5D01G409900 chr5D 9032120 9032689 569 True 420.000000 420 80.651000 3 564 1 chr5D.!!$R1 561
3 TraesCS5D01G409900 chr5D 218853996 218854583 587 True 381.000000 381 78.956000 107 680 1 chr5D.!!$R2 573
4 TraesCS5D01G409900 chr5A 593169435 593172465 3030 False 975.750000 1958 90.905250 2754 5955 4 chr5A.!!$F2 3201
5 TraesCS5D01G409900 chr5A 593161982 593164356 2374 False 797.666667 1384 92.286667 738 2760 3 chr5A.!!$F1 2022
6 TraesCS5D01G409900 chr5A 682612201 682612760 559 True 278.000000 278 76.541000 3 564 1 chr5A.!!$R1 561
7 TraesCS5D01G409900 chr5B 580681325 580686480 5155 False 899.857143 1698 92.660429 725 5955 7 chr5B.!!$F2 5230
8 TraesCS5D01G409900 chr5B 13092273 13092848 575 False 459.000000 459 81.864000 45 607 1 chr5B.!!$F1 562
9 TraesCS5D01G409900 chr3A 689756049 689756653 604 True 990.000000 990 96.198000 920 1524 1 chr3A.!!$R2 604
10 TraesCS5D01G409900 chr2A 269269841 269270445 604 True 941.000000 941 94.711000 920 1524 1 chr2A.!!$R1 604
11 TraesCS5D01G409900 chr2A 269307615 269308219 604 True 941.000000 941 94.711000 920 1524 1 chr2A.!!$R2 604
12 TraesCS5D01G409900 chr1D 62440074 62440782 708 False 627.000000 627 83.357000 3 686 1 chr1D.!!$F2 683
13 TraesCS5D01G409900 chr1D 606621 607200 579 False 460.000000 460 81.507000 122 687 1 chr1D.!!$F1 565
14 TraesCS5D01G409900 chr6D 433361816 433362509 693 False 592.000000 592 82.783000 3 668 1 chr6D.!!$F2 665
15 TraesCS5D01G409900 chr6D 363321920 363322601 681 False 414.000000 414 78.236000 3 687 1 chr6D.!!$F1 684
16 TraesCS5D01G409900 chr7B 664315812 664316507 695 False 568.000000 568 82.117000 3 670 1 chr7B.!!$F2 667
17 TraesCS5D01G409900 chr4D 484586815 484587520 705 False 553.000000 553 81.523000 3 681 1 chr4D.!!$F1 678
18 TraesCS5D01G409900 chr7A 724630113 724630808 695 True 531.000000 531 81.143000 3 673 1 chr7A.!!$R1 670
19 TraesCS5D01G409900 chr3D 5414300 5415005 705 False 525.000000 525 80.818000 1 679 1 chr3D.!!$F1 678
20 TraesCS5D01G409900 chr3D 284955775 284956313 538 True 302.000000 302 77.449000 88 607 1 chr3D.!!$R2 519
21 TraesCS5D01G409900 chr3B 10633411 10634079 668 False 521.000000 521 81.426000 20 664 1 chr3B.!!$F1 644
22 TraesCS5D01G409900 chr7D 74954525 74955226 701 True 433.000000 433 78.541000 3 687 1 chr7D.!!$R1 684
23 TraesCS5D01G409900 chr7D 94667022 94667700 678 False 409.000000 409 78.509000 3 647 1 chr7D.!!$F1 644
24 TraesCS5D01G409900 chr4B 126591461 126592000 539 False 429.000000 429 81.550000 186 709 1 chr4B.!!$F1 523
25 TraesCS5D01G409900 chr4B 51128497 51129063 566 True 383.000000 383 79.658000 3 564 1 chr4B.!!$R1 561
26 TraesCS5D01G409900 chr1B 538462868 538463452 584 False 416.000000 416 80.272000 3 564 1 chr1B.!!$F1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 767 0.185901 ATGGTCCGGAATTCCCCATG 59.814 55.0 24.89 10.6 35.25 3.66 F
2025 2535 0.106708 ACTGAGCCTTCTTGTTGCGA 59.893 50.0 0.00 0.0 0.00 5.10 F
3084 3792 0.108585 AAGCTGGTGATGTGTCGGTT 59.891 50.0 0.00 0.0 0.00 4.44 F
3681 4392 0.036105 TCTGAACATGATGCTGGCGT 60.036 50.0 0.00 0.0 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2612 3320 0.043637 ATTACTCCCTCCCGTCCCAA 59.956 55.0 0.00 0.0 0.00 4.12 R
3670 4381 0.033920 CTAGCCATACGCCAGCATCA 59.966 55.0 0.00 0.0 38.78 3.07 R
4329 5044 0.104855 TGCAGAGTGAGTCGCAGTTT 59.895 50.0 6.44 0.0 32.97 2.66 R
5514 6334 0.535335 GTCTGACCATGCGACCCTTA 59.465 55.0 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.046988 CATGGCAGCAGTCGGACA 60.047 61.111 11.27 0.00 0.00 4.02
127 143 1.655329 GGTCTATCTGGCGTCCGAG 59.345 63.158 0.00 0.00 0.00 4.63
213 232 1.443702 CGAGAACATGGCACGACGA 60.444 57.895 0.00 0.00 0.00 4.20
214 233 1.406219 CGAGAACATGGCACGACGAG 61.406 60.000 0.00 0.00 0.00 4.18
215 234 1.687494 GAGAACATGGCACGACGAGC 61.687 60.000 8.88 8.88 0.00 5.03
218 237 2.738139 CATGGCACGACGAGCACA 60.738 61.111 18.77 13.84 0.00 4.57
429 474 1.102222 CCGACGAGGAAGAGTAGGGG 61.102 65.000 0.00 0.00 45.00 4.79
432 477 2.224475 CGACGAGGAAGAGTAGGGGATA 60.224 54.545 0.00 0.00 0.00 2.59
575 632 1.449070 GGGCGAGTTCCGGTTTAGG 60.449 63.158 0.00 0.00 39.04 2.69
587 644 2.094734 CCGGTTTAGGTTACGTTGCATC 59.905 50.000 0.00 0.00 0.00 3.91
607 664 8.812513 TGCATCTAATAATATGGATTTGAGGG 57.187 34.615 7.99 2.93 0.00 4.30
625 682 9.753674 ATTTGAGGGTTCTAATTTAAGATGTCA 57.246 29.630 0.00 0.00 0.00 3.58
673 731 0.388520 CAGATCAGTGTCCGCGAACA 60.389 55.000 8.23 0.00 0.00 3.18
691 749 2.740826 CGTCCGTGGGCGTTTGAT 60.741 61.111 4.40 0.00 36.15 2.57
694 752 2.671619 CCGTGGGCGTTTGATGGT 60.672 61.111 0.00 0.00 36.15 3.55
700 758 1.673009 GGCGTTTGATGGTCCGGAA 60.673 57.895 5.23 0.00 0.00 4.30
703 761 1.202143 GCGTTTGATGGTCCGGAATTC 60.202 52.381 5.23 3.94 0.00 2.17
709 767 0.185901 ATGGTCCGGAATTCCCCATG 59.814 55.000 24.89 10.60 35.25 3.66
710 768 1.152756 GGTCCGGAATTCCCCATGG 60.153 63.158 19.01 13.72 0.00 3.66
711 769 1.828224 GTCCGGAATTCCCCATGGC 60.828 63.158 19.01 6.82 0.00 4.40
712 770 2.906897 CCGGAATTCCCCATGGCG 60.907 66.667 19.01 0.00 0.00 5.69
713 771 2.906897 CGGAATTCCCCATGGCGG 60.907 66.667 19.01 9.67 0.00 6.13
714 772 3.226537 GGAATTCCCCATGGCGGC 61.227 66.667 14.03 0.00 0.00 6.53
715 773 2.123726 GAATTCCCCATGGCGGCT 60.124 61.111 11.43 0.00 0.00 5.52
716 774 2.442643 AATTCCCCATGGCGGCTG 60.443 61.111 11.43 5.98 0.00 4.85
721 779 3.865383 CCCATGGCGGCTGCTCTA 61.865 66.667 18.85 4.74 42.25 2.43
722 780 2.190313 CCATGGCGGCTGCTCTAA 59.810 61.111 18.85 1.09 42.25 2.10
723 781 1.451927 CCATGGCGGCTGCTCTAAA 60.452 57.895 18.85 0.00 42.25 1.85
850 911 1.272490 TCGCTCCTCGTCAATTTCAGT 59.728 47.619 0.00 0.00 39.67 3.41
1419 1486 1.821216 TTGTTCTTCGGGGATTCAGC 58.179 50.000 0.00 0.00 0.00 4.26
1437 1504 1.787847 CTTAGGCTTTGCGGTGTCG 59.212 57.895 0.00 0.00 39.81 4.35
1480 1548 0.462047 ACGATGGAAGATGGCGTTCC 60.462 55.000 6.22 6.22 43.45 3.62
1524 1592 2.356553 GCACTTGGTGGCGACGTA 60.357 61.111 0.00 0.00 33.64 3.57
1525 1593 2.380410 GCACTTGGTGGCGACGTAG 61.380 63.158 0.00 0.00 33.64 3.51
1527 1595 3.667542 GCACTTGGTGGCGACGTAGTA 62.668 57.143 0.00 0.00 35.46 1.82
1543 1611 6.452494 ACGTAGTACAATCTACAATCTGCT 57.548 37.500 0.38 0.00 41.94 4.24
1549 1617 4.683832 ACAATCTACAATCTGCTACGGTC 58.316 43.478 0.00 0.00 0.00 4.79
1616 1684 3.602483 GGTGCAAAGTACCTCCGATTTA 58.398 45.455 0.00 0.00 35.30 1.40
1642 1717 5.306532 TCTACTGTCTGTACAACGGATTC 57.693 43.478 18.11 0.00 35.69 2.52
1660 1735 7.327975 ACGGATTCAGTGTGAATAGTTTGATA 58.672 34.615 2.15 0.00 46.20 2.15
1661 1736 7.277981 ACGGATTCAGTGTGAATAGTTTGATAC 59.722 37.037 2.15 0.00 46.20 2.24
1663 1738 7.277981 GGATTCAGTGTGAATAGTTTGATACGT 59.722 37.037 2.15 0.00 46.20 3.57
1664 1739 9.297586 GATTCAGTGTGAATAGTTTGATACGTA 57.702 33.333 0.00 0.00 46.20 3.57
1665 1740 8.456904 TTCAGTGTGAATAGTTTGATACGTAC 57.543 34.615 0.00 0.00 30.26 3.67
1673 1750 9.459640 TGAATAGTTTGATACGTACTAGCATTC 57.540 33.333 0.00 0.42 0.00 2.67
1740 1817 2.691409 ATCATGGTCTTGGGTGTACG 57.309 50.000 0.00 0.00 0.00 3.67
1765 1842 5.991328 ACATGCCTAACTGAATATCGTTG 57.009 39.130 0.00 0.00 0.00 4.10
1803 1880 1.089920 ATCTTTGCGCCTGATGACAC 58.910 50.000 4.18 0.00 0.00 3.67
1840 1917 2.417933 GACATGTGGATTCTGTGAGCAC 59.582 50.000 1.15 0.00 0.00 4.40
1849 1926 4.442052 GGATTCTGTGAGCACTACATAGCA 60.442 45.833 1.99 0.00 0.00 3.49
1861 1938 3.646637 ACTACATAGCATCTGTAACCCCC 59.353 47.826 0.00 0.00 0.00 5.40
1878 1955 2.179018 CCGCATTTCCGCCTGTTG 59.821 61.111 0.00 0.00 0.00 3.33
1947 2457 1.968493 TGTTCAGCTCCTAACTTCGGT 59.032 47.619 5.10 0.00 0.00 4.69
1948 2458 3.159472 TGTTCAGCTCCTAACTTCGGTA 58.841 45.455 5.10 0.00 0.00 4.02
1949 2459 3.057033 TGTTCAGCTCCTAACTTCGGTAC 60.057 47.826 5.10 0.00 0.00 3.34
2025 2535 0.106708 ACTGAGCCTTCTTGTTGCGA 59.893 50.000 0.00 0.00 0.00 5.10
2026 2536 1.271054 ACTGAGCCTTCTTGTTGCGAT 60.271 47.619 0.00 0.00 0.00 4.58
2103 2613 5.415077 GCCTTTACCCCTTCTTAGTTTCTTC 59.585 44.000 0.00 0.00 0.00 2.87
2296 2806 2.093106 GGAGAAAGCGAGGAGACTACA 58.907 52.381 0.00 0.00 44.43 2.74
2354 2873 3.055819 TCTTACAGTCCCAGAGCATTCAC 60.056 47.826 0.00 0.00 0.00 3.18
2378 2897 5.238650 CCATAAAGGTTAGCTAATTGGACCG 59.761 44.000 9.88 0.00 35.56 4.79
2481 3189 5.975410 TTTAAGCAAACAAAATTGGTCCG 57.025 34.783 0.00 0.00 39.92 4.79
2494 3202 2.832643 TGGTCCGGTTCTGGTATCTA 57.167 50.000 0.00 0.00 0.00 1.98
2495 3203 2.662866 TGGTCCGGTTCTGGTATCTAG 58.337 52.381 0.00 0.00 0.00 2.43
2496 3204 2.024655 TGGTCCGGTTCTGGTATCTAGT 60.025 50.000 0.00 0.00 0.00 2.57
2497 3205 3.202818 TGGTCCGGTTCTGGTATCTAGTA 59.797 47.826 0.00 0.00 0.00 1.82
2498 3206 3.567585 GGTCCGGTTCTGGTATCTAGTAC 59.432 52.174 0.00 0.00 0.00 2.73
2499 3207 4.459330 GTCCGGTTCTGGTATCTAGTACT 58.541 47.826 0.00 0.00 33.64 2.73
2500 3208 4.514816 GTCCGGTTCTGGTATCTAGTACTC 59.485 50.000 0.00 0.00 33.64 2.59
2501 3209 3.819902 CCGGTTCTGGTATCTAGTACTCC 59.180 52.174 0.00 0.00 33.64 3.85
2502 3210 3.819902 CGGTTCTGGTATCTAGTACTCCC 59.180 52.174 0.00 0.00 33.64 4.30
2503 3211 4.446023 CGGTTCTGGTATCTAGTACTCCCT 60.446 50.000 0.00 0.00 33.64 4.20
2504 3212 5.072055 GGTTCTGGTATCTAGTACTCCCTC 58.928 50.000 0.00 0.00 33.64 4.30
2505 3213 4.997545 TCTGGTATCTAGTACTCCCTCC 57.002 50.000 0.00 0.00 33.64 4.30
2506 3214 3.327172 TCTGGTATCTAGTACTCCCTCCG 59.673 52.174 0.00 0.00 33.64 4.63
2507 3215 3.051581 TGGTATCTAGTACTCCCTCCGT 58.948 50.000 0.00 0.00 33.64 4.69
2508 3216 3.072184 TGGTATCTAGTACTCCCTCCGTC 59.928 52.174 0.00 0.00 33.64 4.79
2509 3217 2.955342 ATCTAGTACTCCCTCCGTCC 57.045 55.000 0.00 0.00 0.00 4.79
2510 3218 0.842635 TCTAGTACTCCCTCCGTCCC 59.157 60.000 0.00 0.00 0.00 4.46
2511 3219 0.549950 CTAGTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37
2512 3220 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
2513 3221 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2514 3222 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2515 3223 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2516 3224 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2517 3225 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2518 3226 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
2519 3227 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
2520 3228 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
2521 3229 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
2522 3230 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
2523 3231 4.820173 CCCTCCGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
2524 3232 4.510340 CCTCCGTCCCAAAATATAAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
2525 3233 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
2526 3234 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
2527 3235 5.939296 TCCGTCCCAAAATATAAGAACGTTT 59.061 36.000 0.46 0.00 0.00 3.60
2528 3236 6.430616 TCCGTCCCAAAATATAAGAACGTTTT 59.569 34.615 0.46 0.00 0.00 2.43
2529 3237 7.040548 TCCGTCCCAAAATATAAGAACGTTTTT 60.041 33.333 9.22 9.22 0.00 1.94
2530 3238 7.061326 CCGTCCCAAAATATAAGAACGTTTTTG 59.939 37.037 13.87 12.16 37.14 2.44
2531 3239 7.804129 CGTCCCAAAATATAAGAACGTTTTTGA 59.196 33.333 13.87 2.81 38.79 2.69
2532 3240 8.908678 GTCCCAAAATATAAGAACGTTTTTGAC 58.091 33.333 13.87 5.89 38.79 3.18
2533 3241 8.630917 TCCCAAAATATAAGAACGTTTTTGACA 58.369 29.630 13.87 0.01 38.79 3.58
2534 3242 8.696175 CCCAAAATATAAGAACGTTTTTGACAC 58.304 33.333 13.87 0.00 38.79 3.67
2535 3243 9.458374 CCAAAATATAAGAACGTTTTTGACACT 57.542 29.630 13.87 0.00 38.79 3.55
2538 3246 9.821662 AAATATAAGAACGTTTTTGACACTAGC 57.178 29.630 13.87 0.00 0.00 3.42
2539 3247 6.854496 ATAAGAACGTTTTTGACACTAGCA 57.146 33.333 13.87 0.00 0.00 3.49
2540 3248 5.751243 AAGAACGTTTTTGACACTAGCAT 57.249 34.783 0.46 0.00 0.00 3.79
2541 3249 6.854496 AAGAACGTTTTTGACACTAGCATA 57.146 33.333 0.46 0.00 0.00 3.14
2542 3250 6.467723 AGAACGTTTTTGACACTAGCATAG 57.532 37.500 0.46 0.00 46.50 2.23
2573 3281 9.990360 AAAAACATTCTTATATTTTGGGAACGT 57.010 25.926 0.00 0.00 0.00 3.99
2574 3282 9.990360 AAAACATTCTTATATTTTGGGAACGTT 57.010 25.926 0.00 0.00 0.00 3.99
2575 3283 9.990360 AAACATTCTTATATTTTGGGAACGTTT 57.010 25.926 0.46 0.00 30.94 3.60
2576 3284 9.990360 AACATTCTTATATTTTGGGAACGTTTT 57.010 25.926 0.46 0.00 0.00 2.43
2577 3285 9.990360 ACATTCTTATATTTTGGGAACGTTTTT 57.010 25.926 0.46 0.00 0.00 1.94
2580 3288 9.465985 TTCTTATATTTTGGGAACGTTTTTGAC 57.534 29.630 0.46 0.00 0.00 3.18
2581 3289 8.630917 TCTTATATTTTGGGAACGTTTTTGACA 58.369 29.630 0.46 0.00 0.00 3.58
2582 3290 8.576936 TTATATTTTGGGAACGTTTTTGACAC 57.423 30.769 0.46 0.00 0.00 3.67
2583 3291 4.522722 TTTTGGGAACGTTTTTGACACT 57.477 36.364 0.46 0.00 0.00 3.55
2584 3292 5.640189 TTTTGGGAACGTTTTTGACACTA 57.360 34.783 0.46 0.00 0.00 2.74
2585 3293 4.886247 TTGGGAACGTTTTTGACACTAG 57.114 40.909 0.46 0.00 0.00 2.57
2586 3294 2.614983 TGGGAACGTTTTTGACACTAGC 59.385 45.455 0.46 0.00 0.00 3.42
2587 3295 2.614983 GGGAACGTTTTTGACACTAGCA 59.385 45.455 0.46 0.00 0.00 3.49
2588 3296 3.252458 GGGAACGTTTTTGACACTAGCAT 59.748 43.478 0.46 0.00 0.00 3.79
2589 3297 4.453136 GGGAACGTTTTTGACACTAGCATA 59.547 41.667 0.46 0.00 0.00 3.14
2590 3298 5.390567 GGGAACGTTTTTGACACTAGCATAG 60.391 44.000 0.46 0.00 46.50 2.23
2619 3327 9.632807 TCAAAAACATTCTTATATTTTGGGACG 57.367 29.630 8.80 0.00 39.94 4.79
2620 3328 8.868916 CAAAAACATTCTTATATTTTGGGACGG 58.131 33.333 0.00 0.00 37.34 4.79
2621 3329 6.709018 AACATTCTTATATTTTGGGACGGG 57.291 37.500 0.00 0.00 0.00 5.28
2622 3330 6.008696 ACATTCTTATATTTTGGGACGGGA 57.991 37.500 0.00 0.00 0.00 5.14
2623 3331 6.062095 ACATTCTTATATTTTGGGACGGGAG 58.938 40.000 0.00 0.00 0.00 4.30
2624 3332 4.699925 TCTTATATTTTGGGACGGGAGG 57.300 45.455 0.00 0.00 0.00 4.30
2625 3333 3.393278 TCTTATATTTTGGGACGGGAGGG 59.607 47.826 0.00 0.00 0.00 4.30
2665 3373 5.510430 TCTTAATACTGAGGCTGTCTCTCA 58.490 41.667 11.02 4.40 42.86 3.27
2673 3381 4.663334 TGAGGCTGTCTCTCAACTACTAA 58.337 43.478 11.02 0.00 42.86 2.24
2771 3479 2.311542 AGGGATTGTGAGGTGCCAAATA 59.688 45.455 0.00 0.00 0.00 1.40
2946 3654 0.617820 GGGGAGAGTAGGCACCAGAA 60.618 60.000 0.00 0.00 0.00 3.02
2996 3704 4.226384 AGAAAAGAGGGAAAACAGGCATT 58.774 39.130 0.00 0.00 0.00 3.56
3006 3714 5.393461 GGGAAAACAGGCATTACAAGATCTG 60.393 44.000 0.00 0.00 0.00 2.90
3013 3721 3.071602 GGCATTACAAGATCTGGGAGCTA 59.928 47.826 1.23 0.00 0.00 3.32
3052 3760 1.202989 TGAGGTTTTGCAGGGCACATA 60.203 47.619 0.00 0.00 38.71 2.29
3084 3792 0.108585 AAGCTGGTGATGTGTCGGTT 59.891 50.000 0.00 0.00 0.00 4.44
3167 3876 1.625616 CCACGCGGTTTACTAGAGTG 58.374 55.000 12.47 0.00 0.00 3.51
3226 3936 8.519799 TCATTTTGACATTCTTATTAGGGGTC 57.480 34.615 0.00 0.00 0.00 4.46
3230 3940 6.248569 TGACATTCTTATTAGGGGTCTTCC 57.751 41.667 0.00 0.00 0.00 3.46
3324 4035 7.661847 CAGAAGTACTACTCTTGTTTGGGATTT 59.338 37.037 0.00 0.00 0.00 2.17
3452 4163 1.020437 GCTCAGGCACATTCCTTAGC 58.980 55.000 0.88 0.88 43.65 3.09
3493 4204 3.320626 GAGCCCTTGCAGAAATTGAAAC 58.679 45.455 0.00 0.00 41.13 2.78
3555 4266 7.870027 TGGAGAGGTACTATTCTGTAAGTAGT 58.130 38.462 0.00 0.00 41.55 2.73
3556 4267 7.774157 TGGAGAGGTACTATTCTGTAAGTAGTG 59.226 40.741 0.00 0.00 41.55 2.74
3557 4268 7.992033 GGAGAGGTACTATTCTGTAAGTAGTGA 59.008 40.741 0.00 0.00 41.55 3.41
3558 4269 9.563748 GAGAGGTACTATTCTGTAAGTAGTGAT 57.436 37.037 0.00 0.00 41.55 3.06
3559 4270 9.924010 AGAGGTACTATTCTGTAAGTAGTGATT 57.076 33.333 0.00 0.00 41.55 2.57
3560 4271 9.953697 GAGGTACTATTCTGTAAGTAGTGATTG 57.046 37.037 0.00 0.00 41.55 2.67
3561 4272 8.414778 AGGTACTATTCTGTAAGTAGTGATTGC 58.585 37.037 0.00 0.00 36.02 3.56
3562 4273 8.195436 GGTACTATTCTGTAAGTAGTGATTGCA 58.805 37.037 0.00 0.00 33.76 4.08
3563 4274 9.751542 GTACTATTCTGTAAGTAGTGATTGCAT 57.248 33.333 0.00 0.00 33.76 3.96
3565 4276 9.751542 ACTATTCTGTAAGTAGTGATTGCATAC 57.248 33.333 0.00 0.00 33.76 2.39
3566 4277 9.197694 CTATTCTGTAAGTAGTGATTGCATACC 57.802 37.037 0.00 0.00 33.76 2.73
3567 4278 6.538945 TCTGTAAGTAGTGATTGCATACCA 57.461 37.500 0.00 0.00 33.76 3.25
3568 4279 6.338146 TCTGTAAGTAGTGATTGCATACCAC 58.662 40.000 0.00 0.00 33.76 4.16
3569 4280 6.043854 TGTAAGTAGTGATTGCATACCACA 57.956 37.500 13.63 6.08 33.53 4.17
3570 4281 6.649155 TGTAAGTAGTGATTGCATACCACAT 58.351 36.000 13.63 0.00 33.53 3.21
3571 4282 7.109501 TGTAAGTAGTGATTGCATACCACATT 58.890 34.615 13.63 8.90 33.53 2.71
3572 4283 6.683974 AAGTAGTGATTGCATACCACATTC 57.316 37.500 13.63 5.89 33.53 2.67
3573 4284 5.994250 AGTAGTGATTGCATACCACATTCT 58.006 37.500 13.63 7.46 33.53 2.40
3574 4285 7.124573 AGTAGTGATTGCATACCACATTCTA 57.875 36.000 13.63 0.00 33.53 2.10
3575 4286 7.212976 AGTAGTGATTGCATACCACATTCTAG 58.787 38.462 13.63 0.00 33.53 2.43
3576 4287 5.994250 AGTGATTGCATACCACATTCTAGT 58.006 37.500 13.63 0.00 33.53 2.57
3577 4288 6.418101 AGTGATTGCATACCACATTCTAGTT 58.582 36.000 13.63 0.00 33.53 2.24
3578 4289 6.540189 AGTGATTGCATACCACATTCTAGTTC 59.460 38.462 13.63 0.00 33.53 3.01
3579 4290 6.316140 GTGATTGCATACCACATTCTAGTTCA 59.684 38.462 8.25 0.00 0.00 3.18
3580 4291 7.012704 GTGATTGCATACCACATTCTAGTTCAT 59.987 37.037 8.25 0.00 0.00 2.57
3581 4292 7.557358 TGATTGCATACCACATTCTAGTTCATT 59.443 33.333 0.00 0.00 0.00 2.57
3582 4293 7.701539 TTGCATACCACATTCTAGTTCATTT 57.298 32.000 0.00 0.00 0.00 2.32
3583 4294 8.800370 TTGCATACCACATTCTAGTTCATTTA 57.200 30.769 0.00 0.00 0.00 1.40
3584 4295 8.978874 TGCATACCACATTCTAGTTCATTTAT 57.021 30.769 0.00 0.00 0.00 1.40
3585 4296 9.407380 TGCATACCACATTCTAGTTCATTTATT 57.593 29.630 0.00 0.00 0.00 1.40
3586 4297 9.669353 GCATACCACATTCTAGTTCATTTATTG 57.331 33.333 0.00 0.00 0.00 1.90
3589 4300 8.862325 ACCACATTCTAGTTCATTTATTGTCA 57.138 30.769 0.00 0.00 0.00 3.58
3590 4301 8.950210 ACCACATTCTAGTTCATTTATTGTCAG 58.050 33.333 0.00 0.00 0.00 3.51
3591 4302 7.912250 CCACATTCTAGTTCATTTATTGTCAGC 59.088 37.037 0.00 0.00 0.00 4.26
3592 4303 7.912250 CACATTCTAGTTCATTTATTGTCAGCC 59.088 37.037 0.00 0.00 0.00 4.85
3593 4304 7.831193 ACATTCTAGTTCATTTATTGTCAGCCT 59.169 33.333 0.00 0.00 0.00 4.58
3594 4305 8.680903 CATTCTAGTTCATTTATTGTCAGCCTT 58.319 33.333 0.00 0.00 0.00 4.35
3595 4306 8.635765 TTCTAGTTCATTTATTGTCAGCCTTT 57.364 30.769 0.00 0.00 0.00 3.11
3596 4307 8.268850 TCTAGTTCATTTATTGTCAGCCTTTC 57.731 34.615 0.00 0.00 0.00 2.62
3597 4308 6.272822 AGTTCATTTATTGTCAGCCTTTCC 57.727 37.500 0.00 0.00 0.00 3.13
3598 4309 6.012745 AGTTCATTTATTGTCAGCCTTTCCT 58.987 36.000 0.00 0.00 0.00 3.36
3599 4310 7.175104 AGTTCATTTATTGTCAGCCTTTCCTA 58.825 34.615 0.00 0.00 0.00 2.94
3600 4311 7.836183 AGTTCATTTATTGTCAGCCTTTCCTAT 59.164 33.333 0.00 0.00 0.00 2.57
3601 4312 8.470002 GTTCATTTATTGTCAGCCTTTCCTATT 58.530 33.333 0.00 0.00 0.00 1.73
3602 4313 7.999679 TCATTTATTGTCAGCCTTTCCTATTG 58.000 34.615 0.00 0.00 0.00 1.90
3603 4314 6.773976 TTTATTGTCAGCCTTTCCTATTGG 57.226 37.500 0.00 0.00 0.00 3.16
3604 4315 4.591321 ATTGTCAGCCTTTCCTATTGGA 57.409 40.909 0.00 0.00 41.36 3.53
3605 4316 3.350219 TGTCAGCCTTTCCTATTGGAC 57.650 47.619 0.00 0.00 43.06 4.02
3606 4317 2.026262 TGTCAGCCTTTCCTATTGGACC 60.026 50.000 0.00 0.00 43.06 4.46
3607 4318 2.026262 GTCAGCCTTTCCTATTGGACCA 60.026 50.000 0.00 0.00 43.06 4.02
3608 4319 2.239654 TCAGCCTTTCCTATTGGACCAG 59.760 50.000 0.00 0.00 43.06 4.00
3609 4320 2.239654 CAGCCTTTCCTATTGGACCAGA 59.760 50.000 0.00 0.00 43.06 3.86
3610 4321 3.117738 CAGCCTTTCCTATTGGACCAGAT 60.118 47.826 0.00 0.00 43.06 2.90
3611 4322 3.529319 AGCCTTTCCTATTGGACCAGATT 59.471 43.478 0.00 0.00 43.06 2.40
3612 4323 4.726825 AGCCTTTCCTATTGGACCAGATTA 59.273 41.667 0.00 0.00 43.06 1.75
3613 4324 5.373854 AGCCTTTCCTATTGGACCAGATTAT 59.626 40.000 0.00 0.00 43.06 1.28
3614 4325 6.071320 GCCTTTCCTATTGGACCAGATTATT 58.929 40.000 0.00 0.00 43.06 1.40
3615 4326 6.015940 GCCTTTCCTATTGGACCAGATTATTG 60.016 42.308 0.00 0.00 43.06 1.90
3616 4327 6.015940 CCTTTCCTATTGGACCAGATTATTGC 60.016 42.308 0.00 0.00 43.06 3.56
3617 4328 5.645056 TCCTATTGGACCAGATTATTGCA 57.355 39.130 0.00 0.00 37.46 4.08
3618 4329 5.376625 TCCTATTGGACCAGATTATTGCAC 58.623 41.667 0.00 0.00 37.46 4.57
3619 4330 4.520492 CCTATTGGACCAGATTATTGCACC 59.480 45.833 0.00 0.00 34.57 5.01
3620 4331 3.737559 TTGGACCAGATTATTGCACCT 57.262 42.857 0.00 0.00 0.00 4.00
3621 4332 3.737559 TGGACCAGATTATTGCACCTT 57.262 42.857 0.00 0.00 0.00 3.50
3622 4333 3.355378 TGGACCAGATTATTGCACCTTG 58.645 45.455 0.00 0.00 0.00 3.61
3623 4334 2.689983 GGACCAGATTATTGCACCTTGG 59.310 50.000 0.00 0.00 0.00 3.61
3624 4335 3.356290 GACCAGATTATTGCACCTTGGT 58.644 45.455 4.70 4.70 0.00 3.67
3625 4336 3.356290 ACCAGATTATTGCACCTTGGTC 58.644 45.455 0.00 0.00 0.00 4.02
3626 4337 3.010584 ACCAGATTATTGCACCTTGGTCT 59.989 43.478 0.00 0.00 0.00 3.85
3627 4338 4.227300 ACCAGATTATTGCACCTTGGTCTA 59.773 41.667 0.00 0.00 0.00 2.59
3628 4339 5.192927 CCAGATTATTGCACCTTGGTCTAA 58.807 41.667 0.00 0.00 0.00 2.10
3629 4340 5.652014 CCAGATTATTGCACCTTGGTCTAAA 59.348 40.000 0.00 0.00 0.00 1.85
3630 4341 6.152661 CCAGATTATTGCACCTTGGTCTAAAA 59.847 38.462 0.00 0.00 0.00 1.52
3631 4342 7.309744 CCAGATTATTGCACCTTGGTCTAAAAA 60.310 37.037 0.00 0.00 0.00 1.94
3661 4372 9.816354 AAACATAGTTTTGCACTTTTAATGACT 57.184 25.926 0.00 0.00 36.88 3.41
3662 4373 9.816354 AACATAGTTTTGCACTTTTAATGACTT 57.184 25.926 0.00 0.00 36.88 3.01
3663 4374 9.463443 ACATAGTTTTGCACTTTTAATGACTTC 57.537 29.630 0.00 0.00 36.88 3.01
3664 4375 9.683069 CATAGTTTTGCACTTTTAATGACTTCT 57.317 29.630 0.00 0.00 36.88 2.85
3665 4376 7.992180 AGTTTTGCACTTTTAATGACTTCTG 57.008 32.000 0.00 0.00 27.32 3.02
3666 4377 7.771183 AGTTTTGCACTTTTAATGACTTCTGA 58.229 30.769 0.00 0.00 27.32 3.27
3667 4378 8.250332 AGTTTTGCACTTTTAATGACTTCTGAA 58.750 29.630 0.00 0.00 27.32 3.02
3668 4379 7.985634 TTTGCACTTTTAATGACTTCTGAAC 57.014 32.000 0.00 0.00 0.00 3.18
3669 4380 6.691754 TGCACTTTTAATGACTTCTGAACA 57.308 33.333 0.00 0.00 0.00 3.18
3670 4381 7.275888 TGCACTTTTAATGACTTCTGAACAT 57.724 32.000 0.00 0.00 0.00 2.71
3671 4382 7.140705 TGCACTTTTAATGACTTCTGAACATG 58.859 34.615 0.00 0.00 0.00 3.21
3672 4383 7.013178 TGCACTTTTAATGACTTCTGAACATGA 59.987 33.333 0.00 0.00 0.00 3.07
3673 4384 8.025445 GCACTTTTAATGACTTCTGAACATGAT 58.975 33.333 0.00 0.00 0.00 2.45
3674 4385 9.338291 CACTTTTAATGACTTCTGAACATGATG 57.662 33.333 0.00 0.00 0.00 3.07
3675 4386 8.025445 ACTTTTAATGACTTCTGAACATGATGC 58.975 33.333 0.00 0.00 0.00 3.91
3676 4387 7.692460 TTTAATGACTTCTGAACATGATGCT 57.308 32.000 0.00 0.00 0.00 3.79
3677 4388 5.562506 AATGACTTCTGAACATGATGCTG 57.437 39.130 0.00 0.00 0.00 4.41
3678 4389 3.340928 TGACTTCTGAACATGATGCTGG 58.659 45.455 0.00 0.00 0.00 4.85
3679 4390 2.089980 ACTTCTGAACATGATGCTGGC 58.910 47.619 0.00 0.00 0.00 4.85
3680 4391 1.063616 CTTCTGAACATGATGCTGGCG 59.936 52.381 0.00 0.00 0.00 5.69
3681 4392 0.036105 TCTGAACATGATGCTGGCGT 60.036 50.000 0.00 0.00 0.00 5.68
3682 4393 1.206849 TCTGAACATGATGCTGGCGTA 59.793 47.619 0.00 0.00 0.00 4.42
3683 4394 2.158914 TCTGAACATGATGCTGGCGTAT 60.159 45.455 0.00 0.00 0.00 3.06
3684 4395 1.941975 TGAACATGATGCTGGCGTATG 59.058 47.619 0.00 0.00 0.00 2.39
3685 4396 1.265095 GAACATGATGCTGGCGTATGG 59.735 52.381 0.00 0.00 0.00 2.74
3686 4397 1.168407 ACATGATGCTGGCGTATGGC 61.168 55.000 0.00 0.56 42.51 4.40
3687 4398 0.887836 CATGATGCTGGCGTATGGCT 60.888 55.000 10.19 0.00 42.94 4.75
3688 4399 0.686789 ATGATGCTGGCGTATGGCTA 59.313 50.000 10.19 0.00 42.94 3.93
3694 4405 2.604046 CTGGCGTATGGCTAGTTTCT 57.396 50.000 10.19 0.00 44.55 2.52
3695 4406 2.205074 CTGGCGTATGGCTAGTTTCTG 58.795 52.381 10.19 0.00 44.55 3.02
3696 4407 1.553248 TGGCGTATGGCTAGTTTCTGT 59.447 47.619 10.19 0.00 42.94 3.41
3697 4408 2.027561 TGGCGTATGGCTAGTTTCTGTT 60.028 45.455 10.19 0.00 42.94 3.16
3698 4409 3.007635 GGCGTATGGCTAGTTTCTGTTT 58.992 45.455 0.27 0.00 42.94 2.83
3699 4410 4.186159 GGCGTATGGCTAGTTTCTGTTTA 58.814 43.478 0.27 0.00 42.94 2.01
3700 4411 4.632688 GGCGTATGGCTAGTTTCTGTTTAA 59.367 41.667 0.27 0.00 42.94 1.52
3701 4412 5.122711 GGCGTATGGCTAGTTTCTGTTTAAA 59.877 40.000 0.27 0.00 42.94 1.52
3702 4413 6.248631 GCGTATGGCTAGTTTCTGTTTAAAG 58.751 40.000 0.00 0.00 39.11 1.85
3703 4414 6.091713 GCGTATGGCTAGTTTCTGTTTAAAGA 59.908 38.462 0.00 0.00 39.11 2.52
3704 4415 7.360607 GCGTATGGCTAGTTTCTGTTTAAAGAA 60.361 37.037 0.00 0.00 39.11 2.52
3705 4416 8.665685 CGTATGGCTAGTTTCTGTTTAAAGAAT 58.334 33.333 0.00 0.00 36.12 2.40
3706 4417 9.774742 GTATGGCTAGTTTCTGTTTAAAGAATG 57.225 33.333 0.00 0.00 36.12 2.67
3707 4418 8.635765 ATGGCTAGTTTCTGTTTAAAGAATGA 57.364 30.769 0.00 0.00 36.12 2.57
3708 4419 8.458573 TGGCTAGTTTCTGTTTAAAGAATGAA 57.541 30.769 0.00 0.00 36.12 2.57
3709 4420 8.908903 TGGCTAGTTTCTGTTTAAAGAATGAAA 58.091 29.630 0.00 0.00 36.12 2.69
3710 4421 9.914131 GGCTAGTTTCTGTTTAAAGAATGAAAT 57.086 29.630 3.96 0.00 36.12 2.17
3763 4474 8.997621 TGTAAAGATAAATTTACTCTCTGCGT 57.002 30.769 0.00 0.00 43.17 5.24
3767 4478 6.407202 AGATAAATTTACTCTCTGCGTGGTT 58.593 36.000 0.00 0.00 0.00 3.67
3799 4510 2.026014 CTTGCACGGTGTTGTGGC 59.974 61.111 10.24 0.00 40.26 5.01
3809 4520 3.193903 ACGGTGTTGTGGCTTTAAAGTTT 59.806 39.130 16.38 0.00 0.00 2.66
3810 4521 4.177783 CGGTGTTGTGGCTTTAAAGTTTT 58.822 39.130 16.38 0.00 0.00 2.43
3824 4535 9.406828 GCTTTAAAGTTTTCTACATTTACCTGG 57.593 33.333 16.38 0.00 0.00 4.45
3830 4541 7.937649 AGTTTTCTACATTTACCTGGTTGTTC 58.062 34.615 3.84 0.00 0.00 3.18
3831 4542 6.887626 TTTCTACATTTACCTGGTTGTTCC 57.112 37.500 3.84 0.00 0.00 3.62
3832 4543 4.913784 TCTACATTTACCTGGTTGTTCCC 58.086 43.478 3.84 0.00 34.77 3.97
3952 4663 5.690865 CCATGTAGCCTTGGGATAAGTTTA 58.309 41.667 0.00 0.00 33.32 2.01
3986 4697 8.958119 AAGAAAACACTGTTACAGTATCTCAA 57.042 30.769 18.19 0.00 43.43 3.02
3997 4708 9.987272 TGTTACAGTATCTCAATGATTATCTGG 57.013 33.333 0.00 0.00 36.65 3.86
4022 4733 2.731968 CGTTTGTCATATGTTGCAGCCC 60.732 50.000 1.90 0.00 0.00 5.19
4103 4814 1.586422 CGGCTCAATATGGTCCACAG 58.414 55.000 0.00 0.00 0.00 3.66
4120 4831 3.193479 CCACAGAAAAGCCAAAGGGTATC 59.807 47.826 0.00 0.00 36.17 2.24
4138 4849 5.351740 GGGTATCTTCTAGTTTCACTTGCAC 59.648 44.000 0.00 0.00 0.00 4.57
4144 4855 1.312815 AGTTTCACTTGCACTCTGCC 58.687 50.000 0.00 0.00 44.23 4.85
4168 4879 7.201857 GCCTAAATTGGAGCTCTATGTTGAATT 60.202 37.037 14.64 0.00 0.00 2.17
4175 4886 8.862325 TGGAGCTCTATGTTGAATTCTTTTTA 57.138 30.769 14.64 0.00 0.00 1.52
4260 4973 6.806668 TCATTCAACCCTACATCTGACATA 57.193 37.500 0.00 0.00 0.00 2.29
4292 5007 1.400142 CTCAGTAGTCTGTCCTCTGCG 59.600 57.143 0.00 0.00 41.91 5.18
4379 5094 6.252655 CCTTTTAAGAAATATTTTGGTCCGCG 59.747 38.462 0.00 0.00 0.00 6.46
4384 5099 3.547054 AATATTTTGGTCCGCGGTCTA 57.453 42.857 27.15 15.75 0.00 2.59
4397 5112 3.242413 CCGCGGTCTATTTGATTGAACAG 60.242 47.826 19.50 0.00 0.00 3.16
4433 5148 7.174946 GGGACTTCAGTTACTTGATTCAATTGA 59.825 37.037 3.38 3.38 0.00 2.57
4547 5262 0.986019 TTCCCGTATGAGGTGGGCAT 60.986 55.000 0.00 0.00 42.98 4.40
4567 5282 4.027702 GCATTTAGGAAATTTTGCTACGCG 60.028 41.667 3.53 3.53 33.07 6.01
4592 5308 8.004344 CGTTGTTTCAGTAGAACTGTAATGAAG 58.996 37.037 6.93 0.00 46.03 3.02
4618 5334 5.975693 TTGTTGATTTACAGAATGGGGAC 57.024 39.130 0.00 0.00 43.62 4.46
4642 5358 8.123639 ACAATATGAACATAGGCTACGACTAT 57.876 34.615 0.00 0.00 33.56 2.12
4755 5471 1.576421 CTTGGCACTCAAGTTCGCC 59.424 57.895 4.90 4.90 45.81 5.54
4765 5481 0.039165 CAAGTTCGCCTGGCTTTTCC 60.039 55.000 17.92 0.00 0.00 3.13
4767 5483 0.690762 AGTTCGCCTGGCTTTTCCTA 59.309 50.000 17.92 0.00 35.26 2.94
4794 5512 8.763356 TCACAAATTTTCATTCAAAGTACATGC 58.237 29.630 0.00 0.00 0.00 4.06
4801 5519 6.245115 TCATTCAAAGTACATGCTGTTCTG 57.755 37.500 0.00 0.00 28.28 3.02
4819 5537 2.501316 TCTGATATCGGTGCCATATGGG 59.499 50.000 23.30 6.64 40.85 4.00
4901 5621 1.001764 CATGGAAGCTGCCCAGTGA 60.002 57.895 8.77 0.00 37.08 3.41
4949 5669 4.504461 CGAAATGGATTAGAGACAAGACGG 59.496 45.833 0.00 0.00 0.00 4.79
5132 5853 6.149973 CAGTTTCCATCTGCTAATTTGACAGA 59.850 38.462 13.13 13.13 44.06 3.41
5160 5881 0.255890 TCTAATCTTGGTGGCTGGGC 59.744 55.000 0.00 0.00 0.00 5.36
5185 5906 7.984617 GCCATGTATCTCTTCTTTTCTACTTCT 59.015 37.037 0.00 0.00 0.00 2.85
5188 5909 9.796120 ATGTATCTCTTCTTTTCTACTTCTTCG 57.204 33.333 0.00 0.00 0.00 3.79
5197 5918 6.482308 TCTTTTCTACTTCTTCGGTTCCAAAG 59.518 38.462 0.00 0.00 0.00 2.77
5221 5942 9.601217 AAGTATACCTGAACTTATAGCTTTGTG 57.399 33.333 0.00 0.00 34.23 3.33
5338 6132 7.588854 GTCCTAATTTGAACTAAAACCAACGAC 59.411 37.037 0.00 0.00 0.00 4.34
5356 6172 6.072728 CCAACGACACTTATTTTGGATCAGAA 60.073 38.462 0.00 0.00 39.33 3.02
5361 6177 5.649831 ACACTTATTTTGGATCAGAAGGAGC 59.350 40.000 0.00 0.00 0.00 4.70
5383 6199 8.992073 GGAGCATGTTTTTCTACAAATTTGATT 58.008 29.630 24.64 5.87 0.00 2.57
5428 6244 8.378172 TGTTTGATTTAGTAAGAACAGAGGTG 57.622 34.615 0.00 0.00 0.00 4.00
5429 6245 7.444183 TGTTTGATTTAGTAAGAACAGAGGTGG 59.556 37.037 0.00 0.00 0.00 4.61
5430 6246 6.681729 TGATTTAGTAAGAACAGAGGTGGT 57.318 37.500 0.00 0.00 0.00 4.16
5431 6247 7.786046 TGATTTAGTAAGAACAGAGGTGGTA 57.214 36.000 0.00 0.00 0.00 3.25
5433 6249 5.990120 TTAGTAAGAACAGAGGTGGTACC 57.010 43.478 4.43 4.43 38.99 3.34
5434 6250 3.853207 AGTAAGAACAGAGGTGGTACCA 58.147 45.455 11.60 11.60 41.95 3.25
5435 6251 4.426704 AGTAAGAACAGAGGTGGTACCAT 58.573 43.478 19.72 1.90 41.95 3.55
5436 6252 3.983044 AAGAACAGAGGTGGTACCATC 57.017 47.619 19.72 18.87 41.95 3.51
5437 6253 1.825474 AGAACAGAGGTGGTACCATCG 59.175 52.381 19.72 7.47 41.95 3.84
5438 6254 0.249398 AACAGAGGTGGTACCATCGC 59.751 55.000 20.29 20.29 41.95 4.58
5439 6255 0.902984 ACAGAGGTGGTACCATCGCA 60.903 55.000 27.91 0.00 41.95 5.10
5440 6256 0.179100 CAGAGGTGGTACCATCGCAG 60.179 60.000 27.91 18.11 41.95 5.18
5441 6257 0.324368 AGAGGTGGTACCATCGCAGA 60.324 55.000 27.91 0.00 41.95 4.26
5475 6292 4.842574 TGGCAGTACAGCAAAGATATGAA 58.157 39.130 12.66 0.00 35.83 2.57
5476 6293 4.635765 TGGCAGTACAGCAAAGATATGAAC 59.364 41.667 12.66 0.00 35.83 3.18
5494 6314 1.230635 ACTGTGCTGTTCCGTGATGC 61.231 55.000 0.00 0.00 0.00 3.91
5500 6320 1.742761 CTGTTCCGTGATGCCTCATT 58.257 50.000 0.00 0.00 32.98 2.57
5514 6334 3.118149 TGCCTCATTATCACTCTGCACAT 60.118 43.478 0.00 0.00 0.00 3.21
5588 6408 5.616488 TTTTCTAAGTGCATACGGGTTTC 57.384 39.130 0.00 0.00 0.00 2.78
5592 6412 0.606604 AGTGCATACGGGTTTCTCGT 59.393 50.000 0.00 0.00 43.64 4.18
5628 6448 4.646492 AGGCACAACTCAGAGAAATTTTGT 59.354 37.500 3.79 0.78 0.00 2.83
5702 6558 8.527810 TCAAAAACCATACAGATTAATCCCAAC 58.472 33.333 11.92 0.00 0.00 3.77
5727 6583 8.865090 ACAAAAATAACCCATACATTTCACTGA 58.135 29.630 0.00 0.00 0.00 3.41
5738 6594 5.869753 ACATTTCACTGATGCAACTCTAC 57.130 39.130 0.00 0.00 0.00 2.59
5830 6686 0.171007 CGCCACATTCATCAACCACC 59.829 55.000 0.00 0.00 0.00 4.61
5835 6691 3.129813 CCACATTCATCAACCACCATCAG 59.870 47.826 0.00 0.00 0.00 2.90
5837 6693 4.012374 ACATTCATCAACCACCATCAGTC 58.988 43.478 0.00 0.00 0.00 3.51
5851 6710 6.183360 CCACCATCAGTCGAGTATAAACAGTA 60.183 42.308 0.00 0.00 0.00 2.74
5853 6712 8.565416 CACCATCAGTCGAGTATAAACAGTATA 58.435 37.037 0.00 0.00 0.00 1.47
5887 6746 8.347035 GTTTACAAATACAAGGTTACAAGCTCA 58.653 33.333 0.00 0.00 35.34 4.26
5948 6807 1.089920 GTCGTAGGACGGCTAGTTGA 58.910 55.000 0.00 0.00 43.82 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.584724 ATGGATTCCCGACAGAAGGT 58.415 50.000 0.00 0.00 34.29 3.50
564 614 2.142319 GCAACGTAACCTAAACCGGAA 58.858 47.619 9.46 0.00 0.00 4.30
647 705 1.270826 CGGACACTGATCTGTCACACT 59.729 52.381 14.90 0.00 42.17 3.55
649 707 0.038251 GCGGACACTGATCTGTCACA 60.038 55.000 14.90 0.00 42.17 3.58
655 713 0.388649 GTGTTCGCGGACACTGATCT 60.389 55.000 37.33 0.00 44.99 2.75
673 731 3.524648 ATCAAACGCCCACGGACGT 62.525 57.895 0.00 0.00 46.04 4.34
691 749 1.612513 CATGGGGAATTCCGGACCA 59.387 57.895 19.57 19.57 36.71 4.02
694 752 2.600731 GCCATGGGGAATTCCGGA 59.399 61.111 18.30 0.00 36.71 5.14
709 767 2.878406 TCATTAATTTAGAGCAGCCGCC 59.122 45.455 0.00 0.00 39.83 6.13
710 768 4.023707 ACATCATTAATTTAGAGCAGCCGC 60.024 41.667 0.00 0.00 38.99 6.53
711 769 5.679734 ACATCATTAATTTAGAGCAGCCG 57.320 39.130 0.00 0.00 0.00 5.52
712 770 9.971922 AATTTACATCATTAATTTAGAGCAGCC 57.028 29.630 0.00 0.00 0.00 4.85
796 854 1.874872 CGATTGGTTTGTTACACGGGT 59.125 47.619 0.00 0.00 0.00 5.28
850 911 2.185867 GCGGTCGTGGAATGGCTA 59.814 61.111 0.00 0.00 0.00 3.93
1419 1486 1.635663 CCGACACCGCAAAGCCTAAG 61.636 60.000 0.00 0.00 0.00 2.18
1480 1548 3.922240 CGCATCCTCACCAAAAATTTCAG 59.078 43.478 0.00 0.00 0.00 3.02
1524 1592 5.360144 ACCGTAGCAGATTGTAGATTGTACT 59.640 40.000 0.00 0.00 0.00 2.73
1525 1593 5.589192 ACCGTAGCAGATTGTAGATTGTAC 58.411 41.667 0.00 0.00 0.00 2.90
1526 1594 5.505159 CGACCGTAGCAGATTGTAGATTGTA 60.505 44.000 0.00 0.00 0.00 2.41
1527 1595 4.683832 GACCGTAGCAGATTGTAGATTGT 58.316 43.478 0.00 0.00 0.00 2.71
1528 1596 3.731216 CGACCGTAGCAGATTGTAGATTG 59.269 47.826 0.00 0.00 0.00 2.67
1529 1597 3.380637 ACGACCGTAGCAGATTGTAGATT 59.619 43.478 0.00 0.00 0.00 2.40
1530 1598 2.950309 ACGACCGTAGCAGATTGTAGAT 59.050 45.455 0.00 0.00 0.00 1.98
1531 1599 2.353889 GACGACCGTAGCAGATTGTAGA 59.646 50.000 0.00 0.00 0.00 2.59
1532 1600 2.355132 AGACGACCGTAGCAGATTGTAG 59.645 50.000 0.00 0.00 0.00 2.74
1533 1601 2.096980 CAGACGACCGTAGCAGATTGTA 59.903 50.000 0.00 0.00 0.00 2.41
1534 1602 1.135373 CAGACGACCGTAGCAGATTGT 60.135 52.381 0.00 0.00 0.00 2.71
1539 1607 0.522180 AGAACAGACGACCGTAGCAG 59.478 55.000 0.00 0.00 0.00 4.24
1587 1655 3.219281 AGGTACTTTGCACCGACAAATT 58.781 40.909 0.00 0.00 41.21 1.82
1616 1684 5.008331 TCCGTTGTACAGACAGTAGATTCT 58.992 41.667 0.00 0.00 36.76 2.40
1642 1717 9.222916 CTAGTACGTATCAAACTATTCACACTG 57.777 37.037 0.00 0.00 0.00 3.66
1660 1735 2.677037 GCCCACAAGAATGCTAGTACGT 60.677 50.000 0.00 0.00 0.00 3.57
1661 1736 1.933853 GCCCACAAGAATGCTAGTACG 59.066 52.381 0.00 0.00 0.00 3.67
1663 1738 3.009033 AGTTGCCCACAAGAATGCTAGTA 59.991 43.478 0.00 0.00 36.16 1.82
1664 1739 2.162681 GTTGCCCACAAGAATGCTAGT 58.837 47.619 0.00 0.00 36.16 2.57
1665 1740 2.421424 GAGTTGCCCACAAGAATGCTAG 59.579 50.000 0.00 0.00 36.16 3.42
1673 1750 0.670162 CCAGTTGAGTTGCCCACAAG 59.330 55.000 0.00 0.00 36.16 3.16
1704 1781 5.562506 CATGATAATTGCATGGGAGCTAG 57.437 43.478 12.70 0.00 39.48 3.42
1740 1817 7.345192 CAACGATATTCAGTTAGGCATGTAAC 58.655 38.462 0.00 0.00 33.72 2.50
1765 1842 3.251729 AGATTGTGATATTCCACATGCGC 59.748 43.478 0.00 0.00 45.31 6.09
1803 1880 3.192001 ACATGTCTTGCATTTGCTGGTAG 59.808 43.478 3.94 0.00 42.66 3.18
1840 1917 4.273148 GGGGGTTACAGATGCTATGTAG 57.727 50.000 0.00 0.00 34.76 2.74
1861 1938 2.179018 CAACAGGCGGAAATGCGG 59.821 61.111 0.00 0.00 35.06 5.69
1862 1939 2.504681 GCAACAGGCGGAAATGCG 60.505 61.111 0.00 0.00 35.06 4.73
1875 1952 1.372997 TCCTGAAGACTCGCGCAAC 60.373 57.895 8.75 0.00 0.00 4.17
1903 1980 4.154015 TGAGATTAAAATCCACACAGCACG 59.846 41.667 0.00 0.00 36.04 5.34
1906 1983 6.199937 ACATGAGATTAAAATCCACACAGC 57.800 37.500 0.00 0.00 36.04 4.40
1947 2457 6.688073 AAGGGCTAGTATAGTAGGTACGTA 57.312 41.667 15.03 0.00 41.93 3.57
1948 2458 5.574970 AAGGGCTAGTATAGTAGGTACGT 57.425 43.478 15.03 0.00 41.93 3.57
1949 2459 7.390027 TCTTAAGGGCTAGTATAGTAGGTACG 58.610 42.308 15.03 0.00 41.93 3.67
1950 2460 9.008965 GTTCTTAAGGGCTAGTATAGTAGGTAC 57.991 40.741 15.03 0.57 41.93 3.34
2025 2535 9.197306 GGTACAGGAAAAAGGAAATATACCAAT 57.803 33.333 0.00 0.00 0.00 3.16
2026 2536 8.171400 TGGTACAGGAAAAAGGAAATATACCAA 58.829 33.333 0.00 0.00 36.34 3.67
2103 2613 1.202222 GCAACATTGAGCAGATTCCCG 60.202 52.381 0.00 0.00 0.00 5.14
2296 2806 7.756614 AGAGTTACCTTGTCCTTATTCCTTTT 58.243 34.615 0.00 0.00 0.00 2.27
2354 2873 5.238650 CGGTCCAATTAGCTAACCTTTATGG 59.761 44.000 8.70 10.36 42.93 2.74
2367 2886 4.159879 AGTCTAACTCACCGGTCCAATTAG 59.840 45.833 2.59 10.85 0.00 1.73
2378 2897 4.765856 TGGTCTCTAACAGTCTAACTCACC 59.234 45.833 0.00 0.00 0.00 4.02
2460 3168 4.141914 ACCGGACCAATTTTGTTTGCTTAA 60.142 37.500 9.46 0.00 0.00 1.85
2481 3189 5.064314 AGGGAGTACTAGATACCAGAACC 57.936 47.826 0.00 0.00 33.85 3.62
2494 3202 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
2495 3203 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
2496 3204 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2497 3205 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2498 3206 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
2499 3207 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
2500 3208 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
2501 3209 4.510340 CGTTCTTATATTTTGGGACGGAGG 59.490 45.833 0.00 0.00 0.00 4.30
2502 3210 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
2503 3211 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
2504 3212 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
2505 3213 7.804129 TCAAAAACGTTCTTATATTTTGGGACG 59.196 33.333 15.53 0.00 39.94 4.79
2506 3214 8.908678 GTCAAAAACGTTCTTATATTTTGGGAC 58.091 33.333 15.53 7.20 39.94 4.46
2507 3215 8.630917 TGTCAAAAACGTTCTTATATTTTGGGA 58.369 29.630 15.53 4.35 39.94 4.37
2508 3216 8.696175 GTGTCAAAAACGTTCTTATATTTTGGG 58.304 33.333 15.53 0.00 39.94 4.12
2509 3217 9.458374 AGTGTCAAAAACGTTCTTATATTTTGG 57.542 29.630 15.53 0.00 39.94 3.28
2512 3220 9.821662 GCTAGTGTCAAAAACGTTCTTATATTT 57.178 29.630 0.00 0.00 0.00 1.40
2513 3221 8.995220 TGCTAGTGTCAAAAACGTTCTTATATT 58.005 29.630 0.00 0.00 0.00 1.28
2514 3222 8.542497 TGCTAGTGTCAAAAACGTTCTTATAT 57.458 30.769 0.00 0.00 0.00 0.86
2515 3223 7.949903 TGCTAGTGTCAAAAACGTTCTTATA 57.050 32.000 0.00 0.00 0.00 0.98
2516 3224 6.854496 TGCTAGTGTCAAAAACGTTCTTAT 57.146 33.333 0.00 0.00 0.00 1.73
2517 3225 6.854496 ATGCTAGTGTCAAAAACGTTCTTA 57.146 33.333 0.00 0.00 0.00 2.10
2518 3226 5.751243 ATGCTAGTGTCAAAAACGTTCTT 57.249 34.783 0.00 0.00 0.00 2.52
2519 3227 5.989777 ACTATGCTAGTGTCAAAAACGTTCT 59.010 36.000 0.00 0.00 37.69 3.01
2520 3228 6.224420 ACTATGCTAGTGTCAAAAACGTTC 57.776 37.500 0.00 0.00 37.69 3.95
2533 3241 7.986085 AGAATGTTTTTGACACTATGCTAGT 57.014 32.000 0.00 0.00 42.04 2.57
2547 3255 9.990360 ACGTTCCCAAAATATAAGAATGTTTTT 57.010 25.926 0.00 0.00 35.09 1.94
2548 3256 9.990360 AACGTTCCCAAAATATAAGAATGTTTT 57.010 25.926 0.00 0.00 41.50 2.43
2549 3257 9.990360 AAACGTTCCCAAAATATAAGAATGTTT 57.010 25.926 0.00 13.00 45.15 2.83
2550 3258 9.990360 AAAACGTTCCCAAAATATAAGAATGTT 57.010 25.926 0.00 0.00 44.42 2.71
2551 3259 9.990360 AAAAACGTTCCCAAAATATAAGAATGT 57.010 25.926 0.00 0.00 38.09 2.71
2554 3262 9.465985 GTCAAAAACGTTCCCAAAATATAAGAA 57.534 29.630 0.00 0.00 0.00 2.52
2555 3263 8.630917 TGTCAAAAACGTTCCCAAAATATAAGA 58.369 29.630 0.00 0.00 0.00 2.10
2556 3264 8.696175 GTGTCAAAAACGTTCCCAAAATATAAG 58.304 33.333 0.00 0.00 0.00 1.73
2557 3265 8.414778 AGTGTCAAAAACGTTCCCAAAATATAA 58.585 29.630 0.00 0.00 0.00 0.98
2558 3266 7.942990 AGTGTCAAAAACGTTCCCAAAATATA 58.057 30.769 0.00 0.00 0.00 0.86
2559 3267 6.811954 AGTGTCAAAAACGTTCCCAAAATAT 58.188 32.000 0.00 0.00 0.00 1.28
2560 3268 6.210287 AGTGTCAAAAACGTTCCCAAAATA 57.790 33.333 0.00 0.00 0.00 1.40
2561 3269 5.079689 AGTGTCAAAAACGTTCCCAAAAT 57.920 34.783 0.00 0.00 0.00 1.82
2562 3270 4.522722 AGTGTCAAAAACGTTCCCAAAA 57.477 36.364 0.00 0.00 0.00 2.44
2563 3271 4.439016 GCTAGTGTCAAAAACGTTCCCAAA 60.439 41.667 0.00 0.00 0.00 3.28
2564 3272 3.065648 GCTAGTGTCAAAAACGTTCCCAA 59.934 43.478 0.00 0.00 0.00 4.12
2565 3273 2.614983 GCTAGTGTCAAAAACGTTCCCA 59.385 45.455 0.00 0.00 0.00 4.37
2566 3274 2.614983 TGCTAGTGTCAAAAACGTTCCC 59.385 45.455 0.00 0.00 0.00 3.97
2567 3275 3.955771 TGCTAGTGTCAAAAACGTTCC 57.044 42.857 0.00 0.00 0.00 3.62
2568 3276 6.224420 ACTATGCTAGTGTCAAAAACGTTC 57.776 37.500 0.00 0.00 37.69 3.95
2581 3289 7.986085 AGAATGTTTTTGACACTATGCTAGT 57.014 32.000 0.00 0.00 42.04 2.57
2593 3301 9.632807 CGTCCCAAAATATAAGAATGTTTTTGA 57.367 29.630 7.74 0.00 35.09 2.69
2594 3302 8.868916 CCGTCCCAAAATATAAGAATGTTTTTG 58.131 33.333 0.00 0.00 35.09 2.44
2595 3303 8.038351 CCCGTCCCAAAATATAAGAATGTTTTT 58.962 33.333 0.00 0.00 35.09 1.94
2596 3304 7.397761 TCCCGTCCCAAAATATAAGAATGTTTT 59.602 33.333 0.00 0.00 37.01 2.43
2597 3305 6.893005 TCCCGTCCCAAAATATAAGAATGTTT 59.107 34.615 0.00 0.00 0.00 2.83
2598 3306 6.428295 TCCCGTCCCAAAATATAAGAATGTT 58.572 36.000 0.00 0.00 0.00 2.71
2599 3307 6.008696 TCCCGTCCCAAAATATAAGAATGT 57.991 37.500 0.00 0.00 0.00 2.71
2600 3308 5.473504 CCTCCCGTCCCAAAATATAAGAATG 59.526 44.000 0.00 0.00 0.00 2.67
2601 3309 5.457633 CCCTCCCGTCCCAAAATATAAGAAT 60.458 44.000 0.00 0.00 0.00 2.40
2602 3310 4.141344 CCCTCCCGTCCCAAAATATAAGAA 60.141 45.833 0.00 0.00 0.00 2.52
2603 3311 3.393278 CCCTCCCGTCCCAAAATATAAGA 59.607 47.826 0.00 0.00 0.00 2.10
2604 3312 3.393278 TCCCTCCCGTCCCAAAATATAAG 59.607 47.826 0.00 0.00 0.00 1.73
2605 3313 3.393278 CTCCCTCCCGTCCCAAAATATAA 59.607 47.826 0.00 0.00 0.00 0.98
2606 3314 2.976882 CTCCCTCCCGTCCCAAAATATA 59.023 50.000 0.00 0.00 0.00 0.86
2607 3315 1.774856 CTCCCTCCCGTCCCAAAATAT 59.225 52.381 0.00 0.00 0.00 1.28
2608 3316 1.209621 CTCCCTCCCGTCCCAAAATA 58.790 55.000 0.00 0.00 0.00 1.40
2609 3317 0.845102 ACTCCCTCCCGTCCCAAAAT 60.845 55.000 0.00 0.00 0.00 1.82
2610 3318 0.178897 TACTCCCTCCCGTCCCAAAA 60.179 55.000 0.00 0.00 0.00 2.44
2611 3319 0.178897 TTACTCCCTCCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
2612 3320 0.043637 ATTACTCCCTCCCGTCCCAA 59.956 55.000 0.00 0.00 0.00 4.12
2613 3321 0.043637 AATTACTCCCTCCCGTCCCA 59.956 55.000 0.00 0.00 0.00 4.37
2614 3322 0.468648 CAATTACTCCCTCCCGTCCC 59.531 60.000 0.00 0.00 0.00 4.46
2615 3323 1.201424 ACAATTACTCCCTCCCGTCC 58.799 55.000 0.00 0.00 0.00 4.79
2616 3324 3.345508 AAACAATTACTCCCTCCCGTC 57.654 47.619 0.00 0.00 0.00 4.79
2617 3325 3.842436 AGTAAACAATTACTCCCTCCCGT 59.158 43.478 0.00 0.00 46.97 5.28
2618 3326 4.482952 AGTAAACAATTACTCCCTCCCG 57.517 45.455 0.00 0.00 46.97 5.14
2654 3362 3.190953 ACGTTAGTAGTTGAGAGACAGCC 59.809 47.826 0.00 0.00 0.00 4.85
2665 3373 4.942761 TCAAGGGTTGACGTTAGTAGTT 57.057 40.909 0.00 0.00 34.08 2.24
2736 3444 6.833839 TCACAATCCCTAATAAAACGTTTCG 58.166 36.000 15.01 1.10 0.00 3.46
2771 3479 3.974912 CACAGATCTGATATCGCTGTGT 58.025 45.455 29.27 13.78 46.81 3.72
2946 3654 2.287829 GGGTCTCCCAATGTCGAGT 58.712 57.895 0.00 0.00 44.65 4.18
2996 3704 3.689872 ACCTAGCTCCCAGATCTTGTA 57.310 47.619 0.00 0.00 0.00 2.41
3006 3714 0.837940 CCCAGGTAAACCTAGCTCCC 59.162 60.000 0.25 0.00 46.65 4.30
3022 3730 1.993956 CAAAACCTCACATGGACCCA 58.006 50.000 0.00 0.00 0.00 4.51
3024 3732 1.270550 CTGCAAAACCTCACATGGACC 59.729 52.381 0.00 0.00 0.00 4.46
3052 3760 4.464008 TCACCAGCTTTGTCAGATTTTCT 58.536 39.130 0.00 0.00 0.00 2.52
3167 3876 5.046529 CAGCACTCCTATATGTCAACACTC 58.953 45.833 0.00 0.00 0.00 3.51
3226 3936 1.539827 GGACCAAAACCGTGATGGAAG 59.460 52.381 0.00 0.00 42.00 3.46
3230 3940 4.457603 TGAAATAGGACCAAAACCGTGATG 59.542 41.667 0.00 0.00 0.00 3.07
3452 4163 1.002366 CAGTTGGATCTTCTTCGGCG 58.998 55.000 0.00 0.00 0.00 6.46
3493 4204 2.083774 TGGTAGCCTTTGCAATCTTCG 58.916 47.619 0.00 0.00 41.13 3.79
3555 4266 6.413892 TGAACTAGAATGTGGTATGCAATCA 58.586 36.000 0.00 0.00 0.00 2.57
3556 4267 6.925610 TGAACTAGAATGTGGTATGCAATC 57.074 37.500 0.00 0.00 0.00 2.67
3557 4268 7.886629 AATGAACTAGAATGTGGTATGCAAT 57.113 32.000 0.00 0.00 0.00 3.56
3558 4269 7.701539 AAATGAACTAGAATGTGGTATGCAA 57.298 32.000 0.00 0.00 0.00 4.08
3559 4270 8.978874 ATAAATGAACTAGAATGTGGTATGCA 57.021 30.769 0.00 0.00 0.00 3.96
3560 4271 9.669353 CAATAAATGAACTAGAATGTGGTATGC 57.331 33.333 0.00 0.00 0.00 3.14
3563 4274 9.952030 TGACAATAAATGAACTAGAATGTGGTA 57.048 29.630 0.00 0.00 0.00 3.25
3564 4275 8.862325 TGACAATAAATGAACTAGAATGTGGT 57.138 30.769 0.00 0.00 0.00 4.16
3565 4276 7.912250 GCTGACAATAAATGAACTAGAATGTGG 59.088 37.037 0.00 0.00 0.00 4.17
3566 4277 7.912250 GGCTGACAATAAATGAACTAGAATGTG 59.088 37.037 0.00 0.00 0.00 3.21
3567 4278 7.831193 AGGCTGACAATAAATGAACTAGAATGT 59.169 33.333 0.00 0.00 0.00 2.71
3568 4279 8.218338 AGGCTGACAATAAATGAACTAGAATG 57.782 34.615 0.00 0.00 0.00 2.67
3569 4280 8.814038 AAGGCTGACAATAAATGAACTAGAAT 57.186 30.769 0.00 0.00 0.00 2.40
3570 4281 8.635765 AAAGGCTGACAATAAATGAACTAGAA 57.364 30.769 0.00 0.00 0.00 2.10
3571 4282 7.336931 GGAAAGGCTGACAATAAATGAACTAGA 59.663 37.037 0.00 0.00 0.00 2.43
3572 4283 7.337942 AGGAAAGGCTGACAATAAATGAACTAG 59.662 37.037 0.00 0.00 0.00 2.57
3573 4284 7.175104 AGGAAAGGCTGACAATAAATGAACTA 58.825 34.615 0.00 0.00 0.00 2.24
3574 4285 6.012745 AGGAAAGGCTGACAATAAATGAACT 58.987 36.000 0.00 0.00 0.00 3.01
3575 4286 6.272822 AGGAAAGGCTGACAATAAATGAAC 57.727 37.500 0.00 0.00 0.00 3.18
3576 4287 8.469200 CAATAGGAAAGGCTGACAATAAATGAA 58.531 33.333 0.00 0.00 0.00 2.57
3577 4288 7.068593 CCAATAGGAAAGGCTGACAATAAATGA 59.931 37.037 0.00 0.00 36.89 2.57
3578 4289 7.068593 TCCAATAGGAAAGGCTGACAATAAATG 59.931 37.037 0.00 0.00 42.23 2.32
3579 4290 7.125391 TCCAATAGGAAAGGCTGACAATAAAT 58.875 34.615 0.00 0.00 42.23 1.40
3580 4291 6.489603 TCCAATAGGAAAGGCTGACAATAAA 58.510 36.000 0.00 0.00 42.23 1.40
3581 4292 6.073447 TCCAATAGGAAAGGCTGACAATAA 57.927 37.500 0.00 0.00 42.23 1.40
3582 4293 5.708736 TCCAATAGGAAAGGCTGACAATA 57.291 39.130 0.00 0.00 42.23 1.90
3583 4294 4.591321 TCCAATAGGAAAGGCTGACAAT 57.409 40.909 0.00 0.00 42.23 2.71
3595 4306 5.376625 GTGCAATAATCTGGTCCAATAGGA 58.623 41.667 0.00 0.00 43.21 2.94
3596 4307 4.520492 GGTGCAATAATCTGGTCCAATAGG 59.480 45.833 0.00 0.00 0.00 2.57
3597 4308 5.380043 AGGTGCAATAATCTGGTCCAATAG 58.620 41.667 0.00 0.00 0.00 1.73
3598 4309 5.387113 AGGTGCAATAATCTGGTCCAATA 57.613 39.130 0.00 0.00 0.00 1.90
3599 4310 4.255510 AGGTGCAATAATCTGGTCCAAT 57.744 40.909 0.00 0.00 0.00 3.16
3600 4311 3.737559 AGGTGCAATAATCTGGTCCAA 57.262 42.857 0.00 0.00 0.00 3.53
3601 4312 3.355378 CAAGGTGCAATAATCTGGTCCA 58.645 45.455 0.00 0.00 0.00 4.02
3602 4313 2.689983 CCAAGGTGCAATAATCTGGTCC 59.310 50.000 0.00 0.00 0.00 4.46
3603 4314 3.356290 ACCAAGGTGCAATAATCTGGTC 58.644 45.455 0.00 0.00 0.00 4.02
3604 4315 3.010584 AGACCAAGGTGCAATAATCTGGT 59.989 43.478 0.00 0.00 0.00 4.00
3605 4316 3.624777 AGACCAAGGTGCAATAATCTGG 58.375 45.455 0.00 0.00 0.00 3.86
3606 4317 6.757897 TTTAGACCAAGGTGCAATAATCTG 57.242 37.500 0.00 0.00 0.00 2.90
3607 4318 7.775053 TTTTTAGACCAAGGTGCAATAATCT 57.225 32.000 0.00 0.00 0.00 2.40
3635 4346 9.816354 AGTCATTAAAAGTGCAAAACTATGTTT 57.184 25.926 0.00 0.00 38.56 2.83
3636 4347 9.816354 AAGTCATTAAAAGTGCAAAACTATGTT 57.184 25.926 0.00 0.00 38.56 2.71
3637 4348 9.463443 GAAGTCATTAAAAGTGCAAAACTATGT 57.537 29.630 0.00 0.00 38.56 2.29
3638 4349 9.683069 AGAAGTCATTAAAAGTGCAAAACTATG 57.317 29.630 0.00 0.00 38.56 2.23
3639 4350 9.683069 CAGAAGTCATTAAAAGTGCAAAACTAT 57.317 29.630 0.00 0.00 38.56 2.12
3640 4351 8.898761 TCAGAAGTCATTAAAAGTGCAAAACTA 58.101 29.630 0.00 0.00 38.56 2.24
3641 4352 7.771183 TCAGAAGTCATTAAAAGTGCAAAACT 58.229 30.769 0.00 0.00 42.60 2.66
3642 4353 7.985634 TCAGAAGTCATTAAAAGTGCAAAAC 57.014 32.000 0.00 0.00 0.00 2.43
3643 4354 8.031864 TGTTCAGAAGTCATTAAAAGTGCAAAA 58.968 29.630 0.00 0.00 0.00 2.44
3644 4355 7.542890 TGTTCAGAAGTCATTAAAAGTGCAAA 58.457 30.769 0.00 0.00 0.00 3.68
3645 4356 7.094508 TGTTCAGAAGTCATTAAAAGTGCAA 57.905 32.000 0.00 0.00 0.00 4.08
3646 4357 6.691754 TGTTCAGAAGTCATTAAAAGTGCA 57.308 33.333 0.00 0.00 0.00 4.57
3647 4358 7.362662 TCATGTTCAGAAGTCATTAAAAGTGC 58.637 34.615 0.00 0.00 0.00 4.40
3648 4359 9.338291 CATCATGTTCAGAAGTCATTAAAAGTG 57.662 33.333 0.00 0.00 0.00 3.16
3649 4360 8.025445 GCATCATGTTCAGAAGTCATTAAAAGT 58.975 33.333 0.00 0.00 0.00 2.66
3650 4361 8.242053 AGCATCATGTTCAGAAGTCATTAAAAG 58.758 33.333 0.00 0.00 0.00 2.27
3651 4362 8.024865 CAGCATCATGTTCAGAAGTCATTAAAA 58.975 33.333 0.00 0.00 0.00 1.52
3652 4363 7.362315 CCAGCATCATGTTCAGAAGTCATTAAA 60.362 37.037 0.00 0.00 0.00 1.52
3653 4364 6.094464 CCAGCATCATGTTCAGAAGTCATTAA 59.906 38.462 0.00 0.00 0.00 1.40
3654 4365 5.587443 CCAGCATCATGTTCAGAAGTCATTA 59.413 40.000 0.00 0.00 0.00 1.90
3655 4366 4.398358 CCAGCATCATGTTCAGAAGTCATT 59.602 41.667 0.00 0.00 0.00 2.57
3656 4367 3.945921 CCAGCATCATGTTCAGAAGTCAT 59.054 43.478 0.00 0.00 0.00 3.06
3657 4368 3.340928 CCAGCATCATGTTCAGAAGTCA 58.659 45.455 0.00 0.00 0.00 3.41
3658 4369 2.097142 GCCAGCATCATGTTCAGAAGTC 59.903 50.000 0.00 0.00 0.00 3.01
3659 4370 2.089980 GCCAGCATCATGTTCAGAAGT 58.910 47.619 0.00 0.00 0.00 3.01
3660 4371 1.063616 CGCCAGCATCATGTTCAGAAG 59.936 52.381 0.00 0.00 0.00 2.85
3661 4372 1.089112 CGCCAGCATCATGTTCAGAA 58.911 50.000 0.00 0.00 0.00 3.02
3662 4373 0.036105 ACGCCAGCATCATGTTCAGA 60.036 50.000 0.00 0.00 0.00 3.27
3663 4374 1.655484 TACGCCAGCATCATGTTCAG 58.345 50.000 0.00 0.00 0.00 3.02
3664 4375 1.941975 CATACGCCAGCATCATGTTCA 59.058 47.619 0.00 0.00 0.00 3.18
3665 4376 1.265095 CCATACGCCAGCATCATGTTC 59.735 52.381 0.00 0.00 0.00 3.18
3666 4377 1.311859 CCATACGCCAGCATCATGTT 58.688 50.000 0.00 0.00 0.00 2.71
3667 4378 1.168407 GCCATACGCCAGCATCATGT 61.168 55.000 0.00 0.00 0.00 3.21
3668 4379 0.887836 AGCCATACGCCAGCATCATG 60.888 55.000 0.00 0.00 38.78 3.07
3669 4380 0.686789 TAGCCATACGCCAGCATCAT 59.313 50.000 0.00 0.00 38.78 2.45
3670 4381 0.033920 CTAGCCATACGCCAGCATCA 59.966 55.000 0.00 0.00 38.78 3.07
3671 4382 0.034059 ACTAGCCATACGCCAGCATC 59.966 55.000 0.00 0.00 38.78 3.91
3672 4383 0.469917 AACTAGCCATACGCCAGCAT 59.530 50.000 0.00 0.00 38.78 3.79
3673 4384 0.251916 AAACTAGCCATACGCCAGCA 59.748 50.000 0.00 0.00 38.78 4.41
3674 4385 0.938008 GAAACTAGCCATACGCCAGC 59.062 55.000 0.00 0.00 38.78 4.85
3675 4386 2.205074 CAGAAACTAGCCATACGCCAG 58.795 52.381 0.00 0.00 38.78 4.85
3676 4387 1.553248 ACAGAAACTAGCCATACGCCA 59.447 47.619 0.00 0.00 38.78 5.69
3677 4388 2.311124 ACAGAAACTAGCCATACGCC 57.689 50.000 0.00 0.00 38.78 5.68
3678 4389 5.789710 TTAAACAGAAACTAGCCATACGC 57.210 39.130 0.00 0.00 37.98 4.42
3679 4390 7.591006 TCTTTAAACAGAAACTAGCCATACG 57.409 36.000 0.00 0.00 0.00 3.06
3680 4391 9.774742 CATTCTTTAAACAGAAACTAGCCATAC 57.225 33.333 0.00 0.00 36.36 2.39
3681 4392 9.733556 TCATTCTTTAAACAGAAACTAGCCATA 57.266 29.630 0.00 0.00 36.36 2.74
3682 4393 8.635765 TCATTCTTTAAACAGAAACTAGCCAT 57.364 30.769 0.00 0.00 36.36 4.40
3683 4394 8.458573 TTCATTCTTTAAACAGAAACTAGCCA 57.541 30.769 0.00 0.00 36.36 4.75
3684 4395 9.914131 ATTTCATTCTTTAAACAGAAACTAGCC 57.086 29.630 0.00 0.00 36.36 3.93
3737 4448 9.601217 ACGCAGAGAGTAAATTTATCTTTACAT 57.399 29.630 0.31 0.00 41.80 2.29
3738 4449 8.869897 CACGCAGAGAGTAAATTTATCTTTACA 58.130 33.333 0.31 0.00 41.80 2.41
3739 4450 8.328864 CCACGCAGAGAGTAAATTTATCTTTAC 58.671 37.037 0.31 0.00 40.38 2.01
3740 4451 8.038944 ACCACGCAGAGAGTAAATTTATCTTTA 58.961 33.333 0.31 0.00 0.00 1.85
3741 4452 6.879458 ACCACGCAGAGAGTAAATTTATCTTT 59.121 34.615 0.31 0.00 0.00 2.52
3742 4453 6.407202 ACCACGCAGAGAGTAAATTTATCTT 58.593 36.000 0.31 0.00 0.00 2.40
3743 4454 5.978814 ACCACGCAGAGAGTAAATTTATCT 58.021 37.500 0.31 5.67 0.00 1.98
3744 4455 6.456988 CCAACCACGCAGAGAGTAAATTTATC 60.457 42.308 0.31 1.10 0.00 1.75
3745 4456 5.354234 CCAACCACGCAGAGAGTAAATTTAT 59.646 40.000 0.31 0.00 0.00 1.40
3746 4457 4.693566 CCAACCACGCAGAGAGTAAATTTA 59.306 41.667 0.00 0.00 0.00 1.40
3747 4458 3.502211 CCAACCACGCAGAGAGTAAATTT 59.498 43.478 0.00 0.00 0.00 1.82
3762 4473 1.379527 CTTCCCGCTAATCCAACCAC 58.620 55.000 0.00 0.00 0.00 4.16
3763 4474 0.393808 GCTTCCCGCTAATCCAACCA 60.394 55.000 0.00 0.00 35.14 3.67
3809 4520 5.318630 GGGAACAACCAGGTAAATGTAGAA 58.681 41.667 0.00 0.00 41.20 2.10
3810 4521 4.263594 GGGGAACAACCAGGTAAATGTAGA 60.264 45.833 0.00 0.00 41.20 2.59
3824 4535 5.339008 AAGTTCAAGAAAAGGGGAACAAC 57.661 39.130 0.00 0.00 41.49 3.32
3871 4582 3.993736 GCCGGCAATTTAACACAAGAAAT 59.006 39.130 24.80 0.00 0.00 2.17
3881 4592 3.518634 GGATGAAAGCCGGCAATTTAA 57.481 42.857 31.54 15.17 24.31 1.52
3982 4693 7.974675 ACAAACGTAACCAGATAATCATTGAG 58.025 34.615 0.00 0.00 0.00 3.02
3986 4697 9.778741 ATATGACAAACGTAACCAGATAATCAT 57.221 29.630 0.00 0.00 0.00 2.45
3992 4703 6.403200 GCAACATATGACAAACGTAACCAGAT 60.403 38.462 10.38 0.00 0.00 2.90
3993 4704 5.106869 GCAACATATGACAAACGTAACCAGA 60.107 40.000 10.38 0.00 0.00 3.86
3994 4705 5.086058 GCAACATATGACAAACGTAACCAG 58.914 41.667 10.38 0.00 0.00 4.00
3995 4706 4.515567 TGCAACATATGACAAACGTAACCA 59.484 37.500 10.38 0.00 0.00 3.67
3996 4707 5.037015 TGCAACATATGACAAACGTAACC 57.963 39.130 10.38 0.00 0.00 2.85
3997 4708 4.553429 GCTGCAACATATGACAAACGTAAC 59.447 41.667 10.38 0.00 0.00 2.50
4103 4814 6.181190 ACTAGAAGATACCCTTTGGCTTTTC 58.819 40.000 0.00 0.00 34.68 2.29
4120 4831 4.084118 GCAGAGTGCAAGTGAAACTAGAAG 60.084 45.833 0.00 0.00 45.47 2.85
4138 4849 3.557228 AGAGCTCCAATTTAGGCAGAG 57.443 47.619 10.93 0.00 0.00 3.35
4144 4855 9.118300 AGAATTCAACATAGAGCTCCAATTTAG 57.882 33.333 10.93 0.00 0.00 1.85
4233 4944 6.775142 TGTCAGATGTAGGGTTGAATGAAAAA 59.225 34.615 0.00 0.00 0.00 1.94
4238 4949 6.823182 TGTTATGTCAGATGTAGGGTTGAATG 59.177 38.462 0.00 0.00 0.00 2.67
4239 4950 6.957631 TGTTATGTCAGATGTAGGGTTGAAT 58.042 36.000 0.00 0.00 0.00 2.57
4240 4951 6.367374 TGTTATGTCAGATGTAGGGTTGAA 57.633 37.500 0.00 0.00 0.00 2.69
4241 4952 6.013725 ACTTGTTATGTCAGATGTAGGGTTGA 60.014 38.462 0.00 0.00 0.00 3.18
4260 4973 7.873505 GGACAGACTACTGAGATAAAACTTGTT 59.126 37.037 0.00 0.00 46.03 2.83
4276 4989 1.135344 GGAACGCAGAGGACAGACTAC 60.135 57.143 0.00 0.00 0.00 2.73
4292 5007 4.036852 CCAAGGAGACAAACAGAAAGGAAC 59.963 45.833 0.00 0.00 0.00 3.62
4329 5044 0.104855 TGCAGAGTGAGTCGCAGTTT 59.895 50.000 6.44 0.00 32.97 2.66
4379 5094 7.202016 TGTTCACTGTTCAATCAAATAGACC 57.798 36.000 0.00 0.00 0.00 3.85
4384 5099 6.762661 CCCTTTTGTTCACTGTTCAATCAAAT 59.237 34.615 0.00 0.00 0.00 2.32
4397 5112 4.983671 AACTGAAGTCCCTTTTGTTCAC 57.016 40.909 0.00 0.00 0.00 3.18
4442 5157 7.713764 AATGCAGTTCAATGGTTTCTTAAAC 57.286 32.000 0.00 0.00 40.65 2.01
4443 5158 7.440856 GGAAATGCAGTTCAATGGTTTCTTAAA 59.559 33.333 26.35 0.00 0.00 1.52
4592 5308 6.208599 TCCCCATTCTGTAAATCAACAAAGAC 59.791 38.462 0.00 0.00 0.00 3.01
4618 5334 8.244113 TCATAGTCGTAGCCTATGTTCATATTG 58.756 37.037 7.16 0.00 33.96 1.90
4642 5358 2.177394 TTAAGCCGATGCACTGTTCA 57.823 45.000 0.00 0.00 41.13 3.18
4755 5471 7.153985 TGAAAATTTGTGATAGGAAAAGCCAG 58.846 34.615 0.00 0.00 40.02 4.85
4794 5512 2.602257 TGGCACCGATATCAGAACAG 57.398 50.000 3.12 0.00 0.00 3.16
4819 5537 1.767759 AGACATATTTGGCTGTGGGC 58.232 50.000 0.00 0.00 40.77 5.36
4901 5621 3.878778 CGACCCATTTCTCTCCTTTGAT 58.121 45.455 0.00 0.00 0.00 2.57
4949 5669 6.348540 CCTCTGTTTGTTAGCCTCATTTACAC 60.349 42.308 0.00 0.00 0.00 2.90
5022 5742 5.187687 TGTACAGGTACATGATCGTGTAGA 58.812 41.667 24.85 7.20 40.77 2.59
5132 5853 4.817517 CCACCAAGATTAGACTAACACGT 58.182 43.478 0.00 0.00 0.00 4.49
5160 5881 9.883142 AAGAAGTAGAAAAGAAGAGATACATGG 57.117 33.333 0.00 0.00 0.00 3.66
5185 5906 5.012354 AGTTCAGGTATACTTTGGAACCGAA 59.988 40.000 17.55 0.00 36.25 4.30
5188 5909 9.543783 CTATAAGTTCAGGTATACTTTGGAACC 57.456 37.037 17.55 0.00 36.25 3.62
5197 5918 7.852516 GCACAAAGCTATAAGTTCAGGTATAC 58.147 38.462 0.00 0.00 41.15 1.47
5290 6046 9.017509 AGGACCATTATCTGCAACATAATATTG 57.982 33.333 9.29 5.61 0.00 1.90
5314 6070 7.377662 GTGTCGTTGGTTTTAGTTCAAATTAGG 59.622 37.037 0.00 0.00 0.00 2.69
5338 6132 5.649395 TGCTCCTTCTGATCCAAAATAAGTG 59.351 40.000 0.00 0.00 0.00 3.16
5356 6172 7.725251 TCAAATTTGTAGAAAAACATGCTCCT 58.275 30.769 17.47 0.00 0.00 3.69
5400 6216 8.669243 CCTCTGTTCTTACTAAATCAAACATCC 58.331 37.037 0.00 0.00 0.00 3.51
5417 6233 1.825474 CGATGGTACCACCTCTGTTCT 59.175 52.381 19.09 0.00 39.58 3.01
5420 6236 0.902984 TGCGATGGTACCACCTCTGT 60.903 55.000 19.09 0.00 39.58 3.41
5428 6244 3.751698 GGGATTAAATCTGCGATGGTACC 59.248 47.826 4.43 4.43 0.00 3.34
5429 6245 4.642429 AGGGATTAAATCTGCGATGGTAC 58.358 43.478 0.00 0.00 0.00 3.34
5430 6246 4.974645 AGGGATTAAATCTGCGATGGTA 57.025 40.909 0.00 0.00 0.00 3.25
5431 6247 3.864789 AGGGATTAAATCTGCGATGGT 57.135 42.857 0.00 0.00 0.00 3.55
5433 6249 4.095483 GCCATAGGGATTAAATCTGCGATG 59.905 45.833 0.00 0.00 35.59 3.84
5434 6250 4.263462 TGCCATAGGGATTAAATCTGCGAT 60.263 41.667 0.00 0.00 35.59 4.58
5435 6251 3.072330 TGCCATAGGGATTAAATCTGCGA 59.928 43.478 0.00 0.00 35.59 5.10
5436 6252 3.411446 TGCCATAGGGATTAAATCTGCG 58.589 45.455 0.00 0.00 35.59 5.18
5437 6253 4.401925 ACTGCCATAGGGATTAAATCTGC 58.598 43.478 0.00 0.00 35.59 4.26
5438 6254 6.533730 TGTACTGCCATAGGGATTAAATCTG 58.466 40.000 0.00 0.00 35.59 2.90
5439 6255 6.745474 GCTGTACTGCCATAGGGATTAAATCT 60.745 42.308 13.37 0.00 35.59 2.40
5440 6256 5.412904 GCTGTACTGCCATAGGGATTAAATC 59.587 44.000 13.37 0.00 35.59 2.17
5441 6257 5.163099 TGCTGTACTGCCATAGGGATTAAAT 60.163 40.000 20.46 0.00 35.59 1.40
5475 6292 1.230635 GCATCACGGAACAGCACAGT 61.231 55.000 0.00 0.00 0.00 3.55
5476 6293 1.499056 GCATCACGGAACAGCACAG 59.501 57.895 0.00 0.00 0.00 3.66
5494 6314 5.699915 CCTTATGTGCAGAGTGATAATGAGG 59.300 44.000 0.00 0.00 0.00 3.86
5500 6320 3.068165 CGACCCTTATGTGCAGAGTGATA 59.932 47.826 0.00 0.00 0.00 2.15
5514 6334 0.535335 GTCTGACCATGCGACCCTTA 59.465 55.000 0.00 0.00 0.00 2.69
5536 6356 1.666872 GTTCACAGAACCCGTCCGG 60.667 63.158 0.00 0.00 37.81 5.14
5588 6408 1.328680 GCCTGCACATGACATAACGAG 59.671 52.381 0.00 0.00 0.00 4.18
5702 6558 9.874205 ATCAGTGAAATGTATGGGTTATTTTTG 57.126 29.630 0.00 0.00 0.00 2.44
5727 6583 5.423610 AGATCCAACAGTAGTAGAGTTGCAT 59.576 40.000 8.47 1.33 40.85 3.96
5738 6594 4.442192 GGCAGTCCTAAGATCCAACAGTAG 60.442 50.000 0.00 0.00 0.00 2.57
5830 6686 9.814507 GAGTATACTGTTTATACTCGACTGATG 57.185 37.037 10.90 0.00 43.40 3.07
5887 6746 2.746277 GCGCGGACAACCCAGAAT 60.746 61.111 8.83 0.00 34.14 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.