Multiple sequence alignment - TraesCS5D01G409500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G409500 chr5D 100.000 4529 0 0 1 4529 473114266 473118794 0.000000e+00 8364.0
1 TraesCS5D01G409500 chr5D 93.103 87 6 0 4118 4204 413056177 413056263 1.320000e-25 128.0
2 TraesCS5D01G409500 chr5B 95.973 3303 93 18 587 3882 580512605 580515874 0.000000e+00 5326.0
3 TraesCS5D01G409500 chr5B 82.686 618 36 27 1 584 580495726 580496306 2.450000e-132 483.0
4 TraesCS5D01G409500 chr5B 92.258 310 15 2 4200 4500 580517943 580518252 9.000000e-117 431.0
5 TraesCS5D01G409500 chr5B 95.413 109 4 1 3924 4032 580517738 580517845 6.020000e-39 172.0
6 TraesCS5D01G409500 chr5A 93.887 3141 111 31 692 3821 593087554 593090624 0.000000e+00 4662.0
7 TraesCS5D01G409500 chr5A 91.925 161 5 5 4266 4425 593091171 593091324 7.630000e-53 219.0
8 TraesCS5D01G409500 chr5A 94.118 51 2 1 4454 4504 593091330 593091379 4.860000e-10 76.8
9 TraesCS5D01G409500 chr5A 97.059 34 0 1 4042 4074 593090906 593090939 6.330000e-04 56.5
10 TraesCS5D01G409500 chr4D 77.037 1755 347 52 1568 3291 50643178 50641449 0.000000e+00 957.0
11 TraesCS5D01G409500 chr4A 76.742 1823 351 65 1568 3346 546296958 546298751 0.000000e+00 950.0
12 TraesCS5D01G409500 chr4A 72.609 690 144 36 1613 2278 68959427 68958759 7.740000e-43 185.0
13 TraesCS5D01G409500 chr4A 94.186 86 5 0 4118 4203 576584549 576584634 1.020000e-26 132.0
14 TraesCS5D01G409500 chr4B 76.736 1814 351 61 1578 3348 74443107 74441322 0.000000e+00 946.0
15 TraesCS5D01G409500 chr7D 86.207 493 61 6 2765 3254 54363405 54362917 1.120000e-145 527.0
16 TraesCS5D01G409500 chr7D 87.600 250 26 5 2772 3021 182930964 182931208 7.420000e-73 285.0
17 TraesCS5D01G409500 chr7D 75.000 228 45 12 2615 2836 587103278 587103057 1.340000e-15 95.3
18 TraesCS5D01G409500 chr7D 73.094 223 46 13 1741 1956 489114706 489114491 2.920000e-07 67.6
19 TraesCS5D01G409500 chr2A 74.432 704 156 23 2380 3071 652289487 652288796 9.590000e-72 281.0
20 TraesCS5D01G409500 chr2A 92.222 90 7 0 4117 4206 744984883 744984794 1.320000e-25 128.0
21 TraesCS5D01G409500 chr2D 74.845 644 140 21 2439 3071 507750471 507749839 5.770000e-69 272.0
22 TraesCS5D01G409500 chr2B 74.495 643 144 19 2439 3071 596411475 596410843 1.250000e-65 261.0
23 TraesCS5D01G409500 chr6A 76.615 325 70 6 1540 1861 572572415 572572736 1.670000e-39 174.0
24 TraesCS5D01G409500 chr6A 87.736 106 11 2 4095 4199 466089867 466089971 6.150000e-24 122.0
25 TraesCS5D01G409500 chr6D 71.180 746 190 25 1551 2282 427568615 427569349 3.630000e-36 163.0
26 TraesCS5D01G409500 chr6D 92.222 90 7 0 4117 4206 383526422 383526511 1.320000e-25 128.0
27 TraesCS5D01G409500 chr6B 76.817 289 57 10 1578 1861 643898832 643898549 2.180000e-33 154.0
28 TraesCS5D01G409500 chr1B 94.382 89 5 0 4116 4204 345500240 345500328 2.200000e-28 137.0
29 TraesCS5D01G409500 chrUn 94.186 86 5 0 4118 4203 97273099 97273184 1.020000e-26 132.0
30 TraesCS5D01G409500 chr3D 92.222 90 7 0 4116 4205 511662778 511662867 1.320000e-25 128.0
31 TraesCS5D01G409500 chr1D 87.037 108 10 4 4117 4222 390668772 390668667 7.960000e-23 119.0
32 TraesCS5D01G409500 chr7A 73.991 223 44 13 1741 1956 556299832 556299617 1.350000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G409500 chr5D 473114266 473118794 4528 False 8364.000000 8364 100.00000 1 4529 1 chr5D.!!$F2 4528
1 TraesCS5D01G409500 chr5B 580512605 580518252 5647 False 1976.333333 5326 94.54800 587 4500 3 chr5B.!!$F2 3913
2 TraesCS5D01G409500 chr5B 580495726 580496306 580 False 483.000000 483 82.68600 1 584 1 chr5B.!!$F1 583
3 TraesCS5D01G409500 chr5A 593087554 593091379 3825 False 1253.575000 4662 94.24725 692 4504 4 chr5A.!!$F1 3812
4 TraesCS5D01G409500 chr4D 50641449 50643178 1729 True 957.000000 957 77.03700 1568 3291 1 chr4D.!!$R1 1723
5 TraesCS5D01G409500 chr4A 546296958 546298751 1793 False 950.000000 950 76.74200 1568 3346 1 chr4A.!!$F1 1778
6 TraesCS5D01G409500 chr4B 74441322 74443107 1785 True 946.000000 946 76.73600 1578 3348 1 chr4B.!!$R1 1770
7 TraesCS5D01G409500 chr2A 652288796 652289487 691 True 281.000000 281 74.43200 2380 3071 1 chr2A.!!$R1 691
8 TraesCS5D01G409500 chr2D 507749839 507750471 632 True 272.000000 272 74.84500 2439 3071 1 chr2D.!!$R1 632
9 TraesCS5D01G409500 chr2B 596410843 596411475 632 True 261.000000 261 74.49500 2439 3071 1 chr2B.!!$R1 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
516 542 0.026674 AATCAATGCACGCGACGATG 59.973 50.0 15.93 0.22 0.00 3.84 F
550 576 0.105593 AATGCATGACGGCGAGATCT 59.894 50.0 16.62 0.00 36.28 2.75 F
558 584 0.108615 ACGGCGAGATCTCAGTTTGG 60.109 55.0 22.31 6.14 0.00 3.28 F
559 585 0.108615 CGGCGAGATCTCAGTTTGGT 60.109 55.0 22.31 0.00 0.00 3.67 F
588 614 0.321671 GTGGCCAGACAGAGTTGCTA 59.678 55.0 5.11 0.00 0.00 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1852 1896 1.305219 GGCGCACCAGCTTCAACATA 61.305 55.000 10.83 0.00 39.10 2.29 R
2068 2112 3.834858 CTACGCGTCGTCGGATCCG 62.835 68.421 28.62 28.62 41.54 4.18 R
3482 3553 2.856000 ACCCCCAGTTGCAGAGCT 60.856 61.111 0.00 0.00 0.00 4.09 R
3496 3567 1.247567 CCATTCACAAGGTGACACCC 58.752 55.000 21.32 3.49 42.60 4.61 R
3554 3625 0.257039 AATCATTTCGCTCCCCTGCT 59.743 50.000 0.00 0.00 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 75 0.189327 ATTCCATTCCATCCTGGGCC 59.811 55.000 0.00 0.00 38.32 5.80
71 76 1.220518 TTCCATTCCATCCTGGGCCA 61.221 55.000 5.85 5.85 38.32 5.36
72 77 1.456331 CCATTCCATCCTGGGCCAC 60.456 63.158 0.00 0.00 38.32 5.01
73 78 1.825191 CATTCCATCCTGGGCCACG 60.825 63.158 0.00 0.00 38.32 4.94
74 79 3.721370 ATTCCATCCTGGGCCACGC 62.721 63.158 0.00 0.00 38.32 5.34
76 81 4.738998 CCATCCTGGGCCACGCAA 62.739 66.667 0.00 0.00 32.67 4.85
113 118 0.667184 CAACCCAACCGCAAGCATTC 60.667 55.000 0.00 0.00 0.00 2.67
133 138 0.817654 ATGTCTCACGCCATTCTCGA 59.182 50.000 0.00 0.00 0.00 4.04
139 144 3.315521 CGCCATTCTCGACTCGCG 61.316 66.667 0.00 0.00 42.69 5.87
159 164 4.111016 CGTCTACGCTGACCGCCA 62.111 66.667 3.32 0.00 41.76 5.69
167 172 2.741985 CTGACCGCCACGAATGCA 60.742 61.111 0.00 0.00 0.00 3.96
171 176 3.722295 CCGCCACGAATGCACGTT 61.722 61.111 0.00 0.00 44.76 3.99
172 177 2.384309 CCGCCACGAATGCACGTTA 61.384 57.895 0.00 0.00 44.76 3.18
174 179 1.225637 GCCACGAATGCACGTTACG 60.226 57.895 2.19 2.19 44.76 3.18
176 181 1.623081 CCACGAATGCACGTTACGCT 61.623 55.000 4.09 0.00 44.76 5.07
179 184 0.246757 CGAATGCACGTTACGCTGAC 60.247 55.000 4.09 0.73 0.00 3.51
180 185 0.094730 GAATGCACGTTACGCTGACC 59.905 55.000 4.09 0.00 0.00 4.02
181 186 1.623081 AATGCACGTTACGCTGACCG 61.623 55.000 4.09 0.00 44.21 4.79
246 272 4.780021 AGATCTCCACCGGCAAATATCTAT 59.220 41.667 0.00 0.00 0.00 1.98
247 273 4.271696 TCTCCACCGGCAAATATCTATG 57.728 45.455 0.00 0.00 0.00 2.23
248 274 3.007940 TCTCCACCGGCAAATATCTATGG 59.992 47.826 0.00 0.00 0.00 2.74
249 275 2.976185 TCCACCGGCAAATATCTATGGA 59.024 45.455 0.00 0.00 32.62 3.41
250 276 3.587061 TCCACCGGCAAATATCTATGGAT 59.413 43.478 0.00 0.00 36.07 3.41
251 277 3.941483 CCACCGGCAAATATCTATGGATC 59.059 47.826 0.00 0.00 33.71 3.36
252 278 3.941483 CACCGGCAAATATCTATGGATCC 59.059 47.826 4.20 4.20 33.71 3.36
253 279 3.587061 ACCGGCAAATATCTATGGATCCA 59.413 43.478 18.88 18.88 33.71 3.41
254 280 4.228210 ACCGGCAAATATCTATGGATCCAT 59.772 41.667 29.66 29.66 40.19 3.41
255 281 4.818546 CCGGCAAATATCTATGGATCCATC 59.181 45.833 30.61 12.64 37.82 3.51
265 291 3.329300 GGATCCATCCAATCCACCG 57.671 57.895 6.95 0.00 46.38 4.94
266 292 0.474184 GGATCCATCCAATCCACCGT 59.526 55.000 6.95 0.00 46.38 4.83
267 293 1.543429 GGATCCATCCAATCCACCGTC 60.543 57.143 6.95 0.00 46.38 4.79
268 294 0.474184 ATCCATCCAATCCACCGTCC 59.526 55.000 0.00 0.00 0.00 4.79
269 295 1.152963 CCATCCAATCCACCGTCCC 60.153 63.158 0.00 0.00 0.00 4.46
270 296 1.523711 CATCCAATCCACCGTCCCG 60.524 63.158 0.00 0.00 0.00 5.14
271 297 1.993391 ATCCAATCCACCGTCCCGT 60.993 57.895 0.00 0.00 0.00 5.28
272 298 1.968050 ATCCAATCCACCGTCCCGTC 61.968 60.000 0.00 0.00 0.00 4.79
273 299 2.508439 CAATCCACCGTCCCGTCG 60.508 66.667 0.00 0.00 0.00 5.12
274 300 2.677524 AATCCACCGTCCCGTCGA 60.678 61.111 0.00 0.00 0.00 4.20
275 301 2.707849 AATCCACCGTCCCGTCGAG 61.708 63.158 0.00 0.00 0.00 4.04
287 313 4.500116 GTCGAGCCCTCCTGCGAC 62.500 72.222 0.00 0.00 44.83 5.19
306 332 3.053291 GACGGGCACGCATGGAAA 61.053 61.111 9.12 0.00 46.04 3.13
307 333 2.361104 ACGGGCACGCATGGAAAT 60.361 55.556 9.12 0.00 46.04 2.17
308 334 2.322999 GACGGGCACGCATGGAAATC 62.323 60.000 9.12 0.00 46.04 2.17
309 335 2.405805 CGGGCACGCATGGAAATCA 61.406 57.895 0.00 0.00 0.00 2.57
310 336 1.889454 GGGCACGCATGGAAATCAA 59.111 52.632 0.00 0.00 0.00 2.57
311 337 0.458370 GGGCACGCATGGAAATCAAC 60.458 55.000 0.00 0.00 0.00 3.18
312 338 0.798009 GGCACGCATGGAAATCAACG 60.798 55.000 0.00 0.00 35.82 4.10
313 339 0.167908 GCACGCATGGAAATCAACGA 59.832 50.000 0.00 0.00 34.45 3.85
314 340 1.791555 GCACGCATGGAAATCAACGAG 60.792 52.381 0.00 0.00 34.45 4.18
315 341 1.086696 ACGCATGGAAATCAACGAGG 58.913 50.000 0.00 0.00 34.45 4.63
316 342 1.086696 CGCATGGAAATCAACGAGGT 58.913 50.000 0.00 0.00 32.80 3.85
317 343 1.202065 CGCATGGAAATCAACGAGGTG 60.202 52.381 0.00 0.00 32.80 4.00
318 344 1.468054 GCATGGAAATCAACGAGGTGC 60.468 52.381 0.00 0.00 0.00 5.01
320 346 0.953471 TGGAAATCAACGAGGTGCGG 60.953 55.000 0.00 0.00 46.49 5.69
321 347 0.672401 GGAAATCAACGAGGTGCGGA 60.672 55.000 0.00 0.00 46.49 5.54
322 348 1.153353 GAAATCAACGAGGTGCGGAA 58.847 50.000 0.00 0.00 46.49 4.30
323 349 1.533731 GAAATCAACGAGGTGCGGAAA 59.466 47.619 0.00 0.00 46.49 3.13
324 350 1.156736 AATCAACGAGGTGCGGAAAG 58.843 50.000 0.00 0.00 46.49 2.62
325 351 0.673644 ATCAACGAGGTGCGGAAAGG 60.674 55.000 0.00 0.00 46.49 3.11
326 352 2.668550 AACGAGGTGCGGAAAGGC 60.669 61.111 0.00 0.00 46.49 4.35
332 358 4.090057 GTGCGGAAAGGCGCTCAC 62.090 66.667 7.64 0.87 40.21 3.51
333 359 4.617520 TGCGGAAAGGCGCTCACA 62.618 61.111 7.64 0.00 35.06 3.58
334 360 3.127533 GCGGAAAGGCGCTCACAT 61.128 61.111 7.64 0.00 0.00 3.21
335 361 2.787249 CGGAAAGGCGCTCACATG 59.213 61.111 7.64 0.00 0.00 3.21
336 362 2.486966 GGAAAGGCGCTCACATGC 59.513 61.111 7.64 0.00 0.00 4.06
337 363 2.334946 GGAAAGGCGCTCACATGCA 61.335 57.895 7.64 0.00 0.00 3.96
338 364 1.136147 GAAAGGCGCTCACATGCAG 59.864 57.895 7.64 0.00 0.00 4.41
339 365 2.862347 GAAAGGCGCTCACATGCAGC 62.862 60.000 7.64 7.11 33.93 5.25
359 385 2.435938 CGCCGTAGCACCACCAAT 60.436 61.111 0.00 0.00 39.83 3.16
360 386 2.461110 CGCCGTAGCACCACCAATC 61.461 63.158 0.00 0.00 39.83 2.67
361 387 2.112815 GCCGTAGCACCACCAATCC 61.113 63.158 0.00 0.00 39.53 3.01
362 388 1.602237 CCGTAGCACCACCAATCCT 59.398 57.895 0.00 0.00 0.00 3.24
363 389 0.035439 CCGTAGCACCACCAATCCTT 60.035 55.000 0.00 0.00 0.00 3.36
364 390 1.369625 CGTAGCACCACCAATCCTTC 58.630 55.000 0.00 0.00 0.00 3.46
365 391 1.751437 GTAGCACCACCAATCCTTCC 58.249 55.000 0.00 0.00 0.00 3.46
366 392 0.251916 TAGCACCACCAATCCTTCCG 59.748 55.000 0.00 0.00 0.00 4.30
367 393 1.303317 GCACCACCAATCCTTCCGT 60.303 57.895 0.00 0.00 0.00 4.69
368 394 1.305930 GCACCACCAATCCTTCCGTC 61.306 60.000 0.00 0.00 0.00 4.79
369 395 0.324943 CACCACCAATCCTTCCGTCT 59.675 55.000 0.00 0.00 0.00 4.18
370 396 0.324943 ACCACCAATCCTTCCGTCTG 59.675 55.000 0.00 0.00 0.00 3.51
371 397 1.026718 CCACCAATCCTTCCGTCTGC 61.027 60.000 0.00 0.00 0.00 4.26
372 398 0.321564 CACCAATCCTTCCGTCTGCA 60.322 55.000 0.00 0.00 0.00 4.41
373 399 0.321653 ACCAATCCTTCCGTCTGCAC 60.322 55.000 0.00 0.00 0.00 4.57
374 400 1.361668 CCAATCCTTCCGTCTGCACG 61.362 60.000 0.00 0.00 46.29 5.34
375 401 1.741770 AATCCTTCCGTCTGCACGC 60.742 57.895 0.00 0.00 45.29 5.34
376 402 2.172483 AATCCTTCCGTCTGCACGCT 62.172 55.000 0.00 0.00 45.29 5.07
377 403 2.842394 ATCCTTCCGTCTGCACGCTG 62.842 60.000 0.00 0.00 45.29 5.18
378 404 3.782244 CTTCCGTCTGCACGCTGC 61.782 66.667 3.44 3.44 45.29 5.25
394 420 4.962836 GCAGGTGCAGCAGGTGGT 62.963 66.667 19.63 0.00 41.59 4.16
395 421 2.981909 CAGGTGCAGCAGGTGGTG 60.982 66.667 19.63 4.77 45.58 4.17
410 436 3.342627 GTGCCGTGCGTGTGCTAA 61.343 61.111 0.00 0.00 43.34 3.09
411 437 2.589159 TGCCGTGCGTGTGCTAAA 60.589 55.556 0.00 0.00 43.34 1.85
412 438 1.963855 TGCCGTGCGTGTGCTAAAT 60.964 52.632 0.00 0.00 43.34 1.40
413 439 1.511887 GCCGTGCGTGTGCTAAATG 60.512 57.895 0.00 0.00 43.34 2.32
414 440 1.511887 CCGTGCGTGTGCTAAATGC 60.512 57.895 0.00 0.00 43.34 3.56
415 441 1.497278 CGTGCGTGTGCTAAATGCT 59.503 52.632 0.00 0.00 43.34 3.79
416 442 0.519175 CGTGCGTGTGCTAAATGCTC 60.519 55.000 0.00 0.00 43.34 4.26
417 443 0.798776 GTGCGTGTGCTAAATGCTCT 59.201 50.000 0.00 0.00 43.34 4.09
418 444 1.078709 TGCGTGTGCTAAATGCTCTC 58.921 50.000 0.00 0.00 43.34 3.20
419 445 1.338105 TGCGTGTGCTAAATGCTCTCT 60.338 47.619 0.00 0.00 43.34 3.10
420 446 1.325943 GCGTGTGCTAAATGCTCTCTC 59.674 52.381 0.00 0.00 43.37 3.20
421 447 2.886081 CGTGTGCTAAATGCTCTCTCT 58.114 47.619 0.00 0.00 43.37 3.10
422 448 2.857152 CGTGTGCTAAATGCTCTCTCTC 59.143 50.000 0.00 0.00 43.37 3.20
423 449 3.428725 CGTGTGCTAAATGCTCTCTCTCT 60.429 47.826 0.00 0.00 43.37 3.10
424 450 4.111916 GTGTGCTAAATGCTCTCTCTCTC 58.888 47.826 0.00 0.00 43.37 3.20
425 451 4.022603 TGTGCTAAATGCTCTCTCTCTCT 58.977 43.478 0.00 0.00 43.37 3.10
426 452 4.097741 TGTGCTAAATGCTCTCTCTCTCTC 59.902 45.833 0.00 0.00 43.37 3.20
427 453 4.339247 GTGCTAAATGCTCTCTCTCTCTCT 59.661 45.833 0.00 0.00 43.37 3.10
428 454 4.580167 TGCTAAATGCTCTCTCTCTCTCTC 59.420 45.833 0.00 0.00 43.37 3.20
429 455 4.823989 GCTAAATGCTCTCTCTCTCTCTCT 59.176 45.833 0.00 0.00 38.95 3.10
430 456 5.278169 GCTAAATGCTCTCTCTCTCTCTCTG 60.278 48.000 0.00 0.00 38.95 3.35
431 457 4.508551 AATGCTCTCTCTCTCTCTCTGA 57.491 45.455 0.00 0.00 0.00 3.27
432 458 3.266510 TGCTCTCTCTCTCTCTCTGAC 57.733 52.381 0.00 0.00 0.00 3.51
433 459 2.205074 GCTCTCTCTCTCTCTCTGACG 58.795 57.143 0.00 0.00 0.00 4.35
434 460 2.826428 CTCTCTCTCTCTCTCTGACGG 58.174 57.143 0.00 0.00 0.00 4.79
435 461 2.168521 CTCTCTCTCTCTCTCTGACGGT 59.831 54.545 0.00 0.00 0.00 4.83
436 462 3.367321 TCTCTCTCTCTCTCTGACGGTA 58.633 50.000 0.00 0.00 0.00 4.02
437 463 3.131577 TCTCTCTCTCTCTCTGACGGTAC 59.868 52.174 0.00 0.00 0.00 3.34
438 464 2.832733 TCTCTCTCTCTCTGACGGTACA 59.167 50.000 0.00 0.00 0.00 2.90
439 465 2.933906 CTCTCTCTCTCTGACGGTACAC 59.066 54.545 0.00 0.00 0.00 2.90
449 475 4.317444 CGGTACACGCCCACCCAA 62.317 66.667 0.00 0.00 34.82 4.12
450 476 2.359478 GGTACACGCCCACCCAAG 60.359 66.667 0.00 0.00 0.00 3.61
451 477 2.745037 GTACACGCCCACCCAAGA 59.255 61.111 0.00 0.00 0.00 3.02
452 478 1.670083 GTACACGCCCACCCAAGAC 60.670 63.158 0.00 0.00 0.00 3.01
453 479 2.141448 TACACGCCCACCCAAGACA 61.141 57.895 0.00 0.00 0.00 3.41
454 480 1.697082 TACACGCCCACCCAAGACAA 61.697 55.000 0.00 0.00 0.00 3.18
455 481 2.113139 ACGCCCACCCAAGACAAG 59.887 61.111 0.00 0.00 0.00 3.16
456 482 2.672996 CGCCCACCCAAGACAAGG 60.673 66.667 0.00 0.00 0.00 3.61
457 483 2.991540 GCCCACCCAAGACAAGGC 60.992 66.667 0.00 0.00 0.00 4.35
458 484 2.520458 CCCACCCAAGACAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
459 485 1.152567 CCCACCCAAGACAAGGCAA 60.153 57.895 0.00 0.00 0.00 4.52
460 486 1.463553 CCCACCCAAGACAAGGCAAC 61.464 60.000 0.00 0.00 0.00 4.17
461 487 1.654220 CACCCAAGACAAGGCAACG 59.346 57.895 0.00 0.00 46.39 4.10
462 488 1.528309 ACCCAAGACAAGGCAACGG 60.528 57.895 0.00 0.00 46.39 4.44
463 489 1.228124 CCCAAGACAAGGCAACGGA 60.228 57.895 0.00 0.00 46.39 4.69
464 490 0.609131 CCCAAGACAAGGCAACGGAT 60.609 55.000 0.00 0.00 46.39 4.18
465 491 1.247567 CCAAGACAAGGCAACGGATT 58.752 50.000 0.00 0.00 46.39 3.01
466 492 1.613437 CCAAGACAAGGCAACGGATTT 59.387 47.619 0.00 0.00 46.39 2.17
467 493 2.351738 CCAAGACAAGGCAACGGATTTC 60.352 50.000 0.00 0.00 46.39 2.17
468 494 1.534729 AGACAAGGCAACGGATTTCC 58.465 50.000 0.00 0.00 46.39 3.13
469 495 0.526211 GACAAGGCAACGGATTTCCC 59.474 55.000 0.00 0.00 46.39 3.97
470 496 0.178975 ACAAGGCAACGGATTTCCCA 60.179 50.000 0.00 0.00 46.39 4.37
471 497 1.185315 CAAGGCAACGGATTTCCCAT 58.815 50.000 0.00 0.00 46.39 4.00
472 498 1.134946 CAAGGCAACGGATTTCCCATC 59.865 52.381 0.00 0.00 46.39 3.51
473 499 0.331278 AGGCAACGGATTTCCCATCA 59.669 50.000 0.00 0.00 46.39 3.07
474 500 1.181786 GGCAACGGATTTCCCATCAA 58.818 50.000 0.00 0.00 34.14 2.57
475 501 1.756538 GGCAACGGATTTCCCATCAAT 59.243 47.619 0.00 0.00 34.14 2.57
476 502 2.223805 GGCAACGGATTTCCCATCAATC 60.224 50.000 0.00 0.00 34.14 2.67
477 503 2.426738 GCAACGGATTTCCCATCAATCA 59.573 45.455 0.00 0.00 32.98 2.57
478 504 3.734902 GCAACGGATTTCCCATCAATCAC 60.735 47.826 0.00 0.00 32.98 3.06
479 505 3.652057 ACGGATTTCCCATCAATCACT 57.348 42.857 0.00 0.00 32.98 3.41
480 506 3.282021 ACGGATTTCCCATCAATCACTG 58.718 45.455 0.00 0.00 32.98 3.66
481 507 3.282021 CGGATTTCCCATCAATCACTGT 58.718 45.455 0.00 0.00 32.98 3.55
482 508 3.065786 CGGATTTCCCATCAATCACTGTG 59.934 47.826 0.17 0.17 32.98 3.66
483 509 4.019174 GGATTTCCCATCAATCACTGTGT 58.981 43.478 7.79 0.00 32.98 3.72
484 510 5.192927 GGATTTCCCATCAATCACTGTGTA 58.807 41.667 7.79 0.00 32.98 2.90
485 511 5.829924 GGATTTCCCATCAATCACTGTGTAT 59.170 40.000 7.79 0.00 32.98 2.29
486 512 6.998074 GGATTTCCCATCAATCACTGTGTATA 59.002 38.462 7.79 0.00 32.98 1.47
487 513 7.041098 GGATTTCCCATCAATCACTGTGTATAC 60.041 40.741 7.79 0.00 32.98 1.47
488 514 6.560003 TTCCCATCAATCACTGTGTATACT 57.440 37.500 7.79 0.00 0.00 2.12
489 515 6.161855 TCCCATCAATCACTGTGTATACTC 57.838 41.667 7.79 0.83 0.00 2.59
490 516 5.660864 TCCCATCAATCACTGTGTATACTCA 59.339 40.000 7.79 5.94 0.00 3.41
491 517 6.327365 TCCCATCAATCACTGTGTATACTCAT 59.673 38.462 7.79 0.00 0.00 2.90
492 518 7.508977 TCCCATCAATCACTGTGTATACTCATA 59.491 37.037 7.79 0.00 0.00 2.15
493 519 8.150296 CCCATCAATCACTGTGTATACTCATAA 58.850 37.037 7.79 0.00 0.00 1.90
494 520 9.716531 CCATCAATCACTGTGTATACTCATAAT 57.283 33.333 7.79 0.88 0.00 1.28
509 535 8.955061 ATACTCATAATTTAATCAATGCACGC 57.045 30.769 0.00 0.00 0.00 5.34
510 536 5.909054 ACTCATAATTTAATCAATGCACGCG 59.091 36.000 3.53 3.53 0.00 6.01
511 537 6.054035 TCATAATTTAATCAATGCACGCGA 57.946 33.333 15.93 0.00 0.00 5.87
512 538 5.906838 TCATAATTTAATCAATGCACGCGAC 59.093 36.000 15.93 4.74 0.00 5.19
513 539 2.152237 TTTAATCAATGCACGCGACG 57.848 45.000 15.93 4.12 0.00 5.12
514 540 1.351153 TTAATCAATGCACGCGACGA 58.649 45.000 15.93 0.00 0.00 4.20
515 541 1.566404 TAATCAATGCACGCGACGAT 58.434 45.000 15.93 1.84 0.00 3.73
516 542 0.026674 AATCAATGCACGCGACGATG 59.973 50.000 15.93 0.22 0.00 3.84
517 543 0.805711 ATCAATGCACGCGACGATGA 60.806 50.000 15.93 12.84 0.00 2.92
518 544 0.805711 TCAATGCACGCGACGATGAT 60.806 50.000 15.93 0.00 0.00 2.45
519 545 0.852136 CAATGCACGCGACGATGATA 59.148 50.000 15.93 0.00 0.00 2.15
520 546 1.131771 AATGCACGCGACGATGATAG 58.868 50.000 15.93 0.00 0.00 2.08
521 547 0.310854 ATGCACGCGACGATGATAGA 59.689 50.000 15.93 0.00 0.00 1.98
522 548 0.317020 TGCACGCGACGATGATAGAG 60.317 55.000 15.93 0.00 0.00 2.43
523 549 0.317103 GCACGCGACGATGATAGAGT 60.317 55.000 15.93 0.00 0.00 3.24
524 550 1.664629 CACGCGACGATGATAGAGTC 58.335 55.000 15.93 0.00 0.00 3.36
525 551 0.587285 ACGCGACGATGATAGAGTCC 59.413 55.000 15.93 0.00 0.00 3.85
526 552 0.451299 CGCGACGATGATAGAGTCCG 60.451 60.000 0.00 0.00 0.00 4.79
527 553 0.726452 GCGACGATGATAGAGTCCGC 60.726 60.000 0.00 0.00 0.00 5.54
528 554 0.451299 CGACGATGATAGAGTCCGCG 60.451 60.000 0.00 0.00 0.00 6.46
529 555 0.110147 GACGATGATAGAGTCCGCGG 60.110 60.000 22.12 22.12 0.00 6.46
530 556 1.210413 CGATGATAGAGTCCGCGGG 59.790 63.158 27.83 6.80 0.00 6.13
531 557 1.235281 CGATGATAGAGTCCGCGGGA 61.235 60.000 27.83 9.51 0.00 5.14
532 558 0.959553 GATGATAGAGTCCGCGGGAA 59.040 55.000 27.83 3.06 31.38 3.97
533 559 1.546476 GATGATAGAGTCCGCGGGAAT 59.454 52.381 27.83 11.58 31.38 3.01
534 560 0.673985 TGATAGAGTCCGCGGGAATG 59.326 55.000 27.83 0.00 31.38 2.67
535 561 0.667792 GATAGAGTCCGCGGGAATGC 60.668 60.000 27.83 10.71 31.38 3.56
536 562 1.399744 ATAGAGTCCGCGGGAATGCA 61.400 55.000 27.83 0.17 31.38 3.96
537 563 1.399744 TAGAGTCCGCGGGAATGCAT 61.400 55.000 27.83 7.79 31.38 3.96
538 564 2.514592 AGTCCGCGGGAATGCATG 60.515 61.111 27.83 0.00 31.38 4.06
539 565 2.513666 GTCCGCGGGAATGCATGA 60.514 61.111 27.83 0.00 31.38 3.07
540 566 2.513666 TCCGCGGGAATGCATGAC 60.514 61.111 27.83 0.00 34.15 3.06
541 567 3.940640 CCGCGGGAATGCATGACG 61.941 66.667 20.10 6.77 34.15 4.35
542 568 3.940640 CGCGGGAATGCATGACGG 61.941 66.667 16.37 10.70 34.15 4.79
543 569 4.256090 GCGGGAATGCATGACGGC 62.256 66.667 16.37 15.47 34.15 5.68
544 570 3.940640 CGGGAATGCATGACGGCG 61.941 66.667 4.80 4.80 36.28 6.46
545 571 2.513666 GGGAATGCATGACGGCGA 60.514 61.111 16.62 0.00 36.28 5.54
546 572 2.537560 GGGAATGCATGACGGCGAG 61.538 63.158 16.62 0.95 36.28 5.03
547 573 1.521457 GGAATGCATGACGGCGAGA 60.521 57.895 16.62 0.00 36.28 4.04
548 574 0.882042 GGAATGCATGACGGCGAGAT 60.882 55.000 16.62 0.94 36.28 2.75
549 575 0.510359 GAATGCATGACGGCGAGATC 59.490 55.000 16.62 0.27 36.28 2.75
550 576 0.105593 AATGCATGACGGCGAGATCT 59.894 50.000 16.62 0.00 36.28 2.75
551 577 0.319383 ATGCATGACGGCGAGATCTC 60.319 55.000 16.62 13.05 36.28 2.75
552 578 1.066422 GCATGACGGCGAGATCTCA 59.934 57.895 22.31 6.78 0.00 3.27
553 579 0.938637 GCATGACGGCGAGATCTCAG 60.939 60.000 22.31 15.23 0.00 3.35
554 580 0.383590 CATGACGGCGAGATCTCAGT 59.616 55.000 22.31 17.38 0.00 3.41
555 581 1.107114 ATGACGGCGAGATCTCAGTT 58.893 50.000 22.31 3.31 0.00 3.16
556 582 0.888619 TGACGGCGAGATCTCAGTTT 59.111 50.000 22.31 3.68 0.00 2.66
557 583 1.272781 GACGGCGAGATCTCAGTTTG 58.727 55.000 22.31 6.85 0.00 2.93
558 584 0.108615 ACGGCGAGATCTCAGTTTGG 60.109 55.000 22.31 6.14 0.00 3.28
559 585 0.108615 CGGCGAGATCTCAGTTTGGT 60.109 55.000 22.31 0.00 0.00 3.67
560 586 1.673033 CGGCGAGATCTCAGTTTGGTT 60.673 52.381 22.31 0.00 0.00 3.67
561 587 2.003301 GGCGAGATCTCAGTTTGGTTC 58.997 52.381 22.31 1.68 0.00 3.62
562 588 2.003301 GCGAGATCTCAGTTTGGTTCC 58.997 52.381 22.31 0.00 0.00 3.62
563 589 2.612972 GCGAGATCTCAGTTTGGTTCCA 60.613 50.000 22.31 0.00 0.00 3.53
564 590 3.257393 CGAGATCTCAGTTTGGTTCCAG 58.743 50.000 22.31 0.00 0.00 3.86
565 591 3.006247 GAGATCTCAGTTTGGTTCCAGC 58.994 50.000 18.11 0.00 0.00 4.85
566 592 1.734465 GATCTCAGTTTGGTTCCAGCG 59.266 52.381 0.00 0.00 0.00 5.18
567 593 0.468226 TCTCAGTTTGGTTCCAGCGT 59.532 50.000 0.00 0.00 0.00 5.07
568 594 0.868406 CTCAGTTTGGTTCCAGCGTC 59.132 55.000 0.00 0.00 0.00 5.19
569 595 0.878523 TCAGTTTGGTTCCAGCGTCG 60.879 55.000 0.00 0.00 0.00 5.12
570 596 1.145377 AGTTTGGTTCCAGCGTCGT 59.855 52.632 0.00 0.00 0.00 4.34
571 597 1.157870 AGTTTGGTTCCAGCGTCGTG 61.158 55.000 0.00 0.00 0.00 4.35
572 598 1.890041 TTTGGTTCCAGCGTCGTGG 60.890 57.895 7.33 7.33 39.19 4.94
573 599 4.980805 TGGTTCCAGCGTCGTGGC 62.981 66.667 8.46 0.00 37.53 5.01
575 601 4.980805 GTTCCAGCGTCGTGGCCA 62.981 66.667 0.00 0.00 37.53 5.36
576 602 4.680237 TTCCAGCGTCGTGGCCAG 62.680 66.667 5.11 0.00 37.53 4.85
579 605 4.662961 CAGCGTCGTGGCCAGACA 62.663 66.667 25.32 5.34 38.46 3.41
580 606 4.363990 AGCGTCGTGGCCAGACAG 62.364 66.667 25.32 20.14 38.46 3.51
581 607 4.357947 GCGTCGTGGCCAGACAGA 62.358 66.667 25.32 13.75 38.46 3.41
582 608 2.126307 CGTCGTGGCCAGACAGAG 60.126 66.667 25.32 12.35 38.46 3.35
583 609 2.920645 CGTCGTGGCCAGACAGAGT 61.921 63.158 25.32 0.00 38.46 3.24
584 610 1.367840 GTCGTGGCCAGACAGAGTT 59.632 57.895 22.75 0.00 38.42 3.01
585 611 0.946221 GTCGTGGCCAGACAGAGTTG 60.946 60.000 22.75 1.37 38.42 3.16
586 612 2.320587 CGTGGCCAGACAGAGTTGC 61.321 63.158 5.11 0.00 0.00 4.17
587 613 1.072159 GTGGCCAGACAGAGTTGCT 59.928 57.895 5.11 0.00 0.00 3.91
588 614 0.321671 GTGGCCAGACAGAGTTGCTA 59.678 55.000 5.11 0.00 0.00 3.49
589 615 0.610174 TGGCCAGACAGAGTTGCTAG 59.390 55.000 0.00 0.00 0.00 3.42
590 616 0.610687 GGCCAGACAGAGTTGCTAGT 59.389 55.000 0.00 0.00 0.00 2.57
591 617 1.825474 GGCCAGACAGAGTTGCTAGTA 59.175 52.381 0.00 0.00 0.00 1.82
592 618 2.159170 GGCCAGACAGAGTTGCTAGTAG 60.159 54.545 0.00 0.00 0.00 2.57
593 619 2.494073 GCCAGACAGAGTTGCTAGTAGT 59.506 50.000 0.00 0.00 0.00 2.73
618 644 3.355957 ATTCCCTCCCAGCTGCTGC 62.356 63.158 23.86 7.62 40.05 5.25
658 684 5.654650 AGAAAAATAATACAATGCCCGACCA 59.345 36.000 0.00 0.00 0.00 4.02
674 700 2.334946 CCACGGTCAGCAACATGGG 61.335 63.158 0.00 0.00 33.83 4.00
681 707 2.845784 AGCAACATGGGCTGGACA 59.154 55.556 12.66 0.00 40.80 4.02
682 708 1.604593 AGCAACATGGGCTGGACAC 60.605 57.895 12.66 0.00 40.80 3.67
683 709 1.604593 GCAACATGGGCTGGACACT 60.605 57.895 0.00 0.00 0.00 3.55
686 712 1.426251 AACATGGGCTGGACACTGGA 61.426 55.000 0.00 0.00 0.00 3.86
688 714 2.976490 ATGGGCTGGACACTGGAGC 61.976 63.158 0.00 0.00 0.00 4.70
775 802 7.010738 CCAGTGATAAAACAAATGATTCATGCC 59.989 37.037 0.00 0.00 0.00 4.40
855 886 3.721035 GGATACCATTTGATTTGCTGGC 58.279 45.455 0.00 0.00 31.72 4.85
880 911 2.278332 ATCCATCGATCCGTCTCTGA 57.722 50.000 0.00 0.00 0.00 3.27
912 943 3.125829 CACCCAACTTGATCAATCACTCG 59.874 47.826 8.96 0.00 36.36 4.18
923 954 1.078759 AATCACTCGCTTTCTCGCCG 61.079 55.000 0.00 0.00 0.00 6.46
956 987 1.999648 ATGCCCACTTGACACATTGT 58.000 45.000 0.00 0.00 0.00 2.71
1007 1038 1.135575 CGGCAGCAAGAAAATGAGACC 60.136 52.381 0.00 0.00 0.00 3.85
1067 1102 4.241999 GCACGCACGCATCCATCC 62.242 66.667 0.00 0.00 0.00 3.51
1068 1103 3.928769 CACGCACGCATCCATCCG 61.929 66.667 0.00 0.00 0.00 4.18
1069 1104 4.451150 ACGCACGCATCCATCCGT 62.451 61.111 0.00 0.00 38.35 4.69
1073 1108 2.009108 CACGCATCCATCCGTCTTG 58.991 57.895 0.00 0.00 35.17 3.02
1074 1109 1.815421 ACGCATCCATCCGTCTTGC 60.815 57.895 0.00 0.00 31.00 4.01
1075 1110 1.522355 CGCATCCATCCGTCTTGCT 60.522 57.895 0.00 0.00 0.00 3.91
1076 1111 1.493950 CGCATCCATCCGTCTTGCTC 61.494 60.000 0.00 0.00 0.00 4.26
1852 1896 1.153369 CATGGACGTGCCGGAGATT 60.153 57.895 5.05 0.00 40.66 2.40
2418 2462 1.456923 GCCGTTGTACTTGTTACCGTC 59.543 52.381 0.00 0.00 0.00 4.79
2953 3012 1.959226 GCACGCGGAGGAGTTGAAA 60.959 57.895 12.47 0.00 0.00 2.69
3493 3564 0.676184 TCGTGAGAAGCTCTGCAACT 59.324 50.000 0.00 0.00 37.03 3.16
3496 3567 0.035881 TGAGAAGCTCTGCAACTGGG 59.964 55.000 0.00 0.00 0.00 4.45
3554 3625 3.064271 GTGCCGGCGTTTTTATAGAATCA 59.936 43.478 23.90 0.00 0.00 2.57
3590 3661 1.818674 GATTGCAACGGGACAAGGATT 59.181 47.619 0.00 0.00 0.00 3.01
3612 3683 1.572085 GATGAATGGATGGCGAGGCG 61.572 60.000 0.00 0.00 0.00 5.52
3613 3684 2.043604 ATGAATGGATGGCGAGGCGA 62.044 55.000 0.00 0.00 0.00 5.54
3614 3685 1.958205 GAATGGATGGCGAGGCGAG 60.958 63.158 0.00 0.00 0.00 5.03
3615 3686 2.650813 GAATGGATGGCGAGGCGAGT 62.651 60.000 0.00 0.00 0.00 4.18
3641 3717 3.151022 GAGACGGAGCAGGGGAGG 61.151 72.222 0.00 0.00 0.00 4.30
3675 3751 0.168568 GGACGAGTGAGACGAAGGAC 59.831 60.000 0.00 0.00 34.70 3.85
3712 3788 5.125417 TGGCCTCTTTTATCTTTGGATTTCG 59.875 40.000 3.32 0.00 33.71 3.46
3829 3906 2.579410 TTTTTAGTGCCTCTCCCACC 57.421 50.000 0.00 0.00 33.75 4.61
3830 3907 0.323629 TTTTAGTGCCTCTCCCACCG 59.676 55.000 0.00 0.00 33.75 4.94
3833 3910 4.083862 GTGCCTCTCCCACCGGAC 62.084 72.222 9.46 0.00 33.32 4.79
3834 3911 4.631740 TGCCTCTCCCACCGGACA 62.632 66.667 9.46 0.00 33.32 4.02
3845 3922 2.125912 CCGGACAAGTGCCTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
3870 3947 9.086336 CGCAGGTAAATTTTGATGTGATTAAAT 57.914 29.630 0.00 0.00 0.00 1.40
3897 5833 8.230486 ACGATCTTCTAGTGCTTAAACAAAATG 58.770 33.333 0.00 0.00 0.00 2.32
3907 5843 7.438160 AGTGCTTAAACAAAATGGAGCTTTAAC 59.562 33.333 0.00 0.00 0.00 2.01
3912 5848 3.323691 ACAAAATGGAGCTTTAACCCCAC 59.676 43.478 0.00 0.00 0.00 4.61
3914 5850 2.215942 ATGGAGCTTTAACCCCACAC 57.784 50.000 0.00 0.00 0.00 3.82
3920 5856 4.202315 GGAGCTTTAACCCCACACAAAAAT 60.202 41.667 0.00 0.00 0.00 1.82
3921 5857 4.956085 AGCTTTAACCCCACACAAAAATC 58.044 39.130 0.00 0.00 0.00 2.17
3922 5858 4.407296 AGCTTTAACCCCACACAAAAATCA 59.593 37.500 0.00 0.00 0.00 2.57
4032 5968 2.498941 ATCGGTGGATGGATCGCGT 61.499 57.895 5.77 0.00 0.00 6.01
4033 5969 1.176619 ATCGGTGGATGGATCGCGTA 61.177 55.000 5.77 0.00 0.00 4.42
4085 6058 4.899239 GCTCGGCTCGGGTGATGG 62.899 72.222 0.00 0.00 0.00 3.51
4086 6059 4.899239 CTCGGCTCGGGTGATGGC 62.899 72.222 0.00 0.00 0.00 4.40
4088 6061 4.776322 CGGCTCGGGTGATGGCAA 62.776 66.667 0.00 0.00 0.00 4.52
4089 6062 2.361104 GGCTCGGGTGATGGCAAA 60.361 61.111 0.00 0.00 0.00 3.68
4090 6063 1.754234 GGCTCGGGTGATGGCAAAT 60.754 57.895 0.00 0.00 0.00 2.32
4091 6064 1.322538 GGCTCGGGTGATGGCAAATT 61.323 55.000 0.00 0.00 0.00 1.82
4092 6065 1.388547 GCTCGGGTGATGGCAAATTA 58.611 50.000 0.00 0.00 0.00 1.40
4115 6088 4.509230 AGCAATGATAACAGTGATACAGCG 59.491 41.667 4.49 0.00 43.54 5.18
4116 6089 4.319046 GCAATGATAACAGTGATACAGCGG 60.319 45.833 4.49 0.00 43.54 5.52
4117 6090 4.672587 ATGATAACAGTGATACAGCGGT 57.327 40.909 0.00 0.00 0.00 5.68
4118 6091 5.784578 ATGATAACAGTGATACAGCGGTA 57.215 39.130 0.00 0.00 0.00 4.02
4119 6092 4.928601 TGATAACAGTGATACAGCGGTAC 58.071 43.478 0.00 0.00 30.94 3.34
4120 6093 4.643334 TGATAACAGTGATACAGCGGTACT 59.357 41.667 0.00 0.00 30.94 2.73
4121 6094 3.505464 AACAGTGATACAGCGGTACTC 57.495 47.619 0.00 0.00 30.94 2.59
4122 6095 2.724454 ACAGTGATACAGCGGTACTCT 58.276 47.619 0.00 0.00 30.94 3.24
4123 6096 2.683867 ACAGTGATACAGCGGTACTCTC 59.316 50.000 0.00 0.00 30.94 3.20
4124 6097 2.946329 CAGTGATACAGCGGTACTCTCT 59.054 50.000 0.00 2.79 30.94 3.10
4125 6098 3.378742 CAGTGATACAGCGGTACTCTCTT 59.621 47.826 0.00 0.00 30.94 2.85
4126 6099 3.628487 AGTGATACAGCGGTACTCTCTTC 59.372 47.826 0.00 0.00 30.94 2.87
4127 6100 2.612672 TGATACAGCGGTACTCTCTTCG 59.387 50.000 0.00 0.00 30.94 3.79
4128 6101 2.105006 TACAGCGGTACTCTCTTCGT 57.895 50.000 0.00 0.00 0.00 3.85
4129 6102 1.245732 ACAGCGGTACTCTCTTCGTT 58.754 50.000 0.00 0.00 0.00 3.85
4130 6103 1.612463 ACAGCGGTACTCTCTTCGTTT 59.388 47.619 0.00 0.00 0.00 3.60
4131 6104 2.251893 CAGCGGTACTCTCTTCGTTTC 58.748 52.381 0.00 0.00 0.00 2.78
4132 6105 1.884579 AGCGGTACTCTCTTCGTTTCA 59.115 47.619 0.00 0.00 0.00 2.69
4133 6106 2.295349 AGCGGTACTCTCTTCGTTTCAA 59.705 45.455 0.00 0.00 0.00 2.69
4134 6107 3.054878 GCGGTACTCTCTTCGTTTCAAA 58.945 45.455 0.00 0.00 0.00 2.69
4135 6108 3.492011 GCGGTACTCTCTTCGTTTCAAAA 59.508 43.478 0.00 0.00 0.00 2.44
4136 6109 4.151867 GCGGTACTCTCTTCGTTTCAAAAT 59.848 41.667 0.00 0.00 0.00 1.82
4137 6110 5.346822 GCGGTACTCTCTTCGTTTCAAAATA 59.653 40.000 0.00 0.00 0.00 1.40
4138 6111 6.453922 GCGGTACTCTCTTCGTTTCAAAATAG 60.454 42.308 0.00 0.00 0.00 1.73
4139 6112 6.805271 CGGTACTCTCTTCGTTTCAAAATAGA 59.195 38.462 0.00 0.00 0.00 1.98
4140 6113 7.488471 CGGTACTCTCTTCGTTTCAAAATAGAT 59.512 37.037 0.00 0.00 0.00 1.98
4141 6114 8.596380 GGTACTCTCTTCGTTTCAAAATAGATG 58.404 37.037 0.00 0.00 0.00 2.90
4142 6115 9.355215 GTACTCTCTTCGTTTCAAAATAGATGA 57.645 33.333 0.00 0.00 0.00 2.92
4143 6116 8.245701 ACTCTCTTCGTTTCAAAATAGATGAC 57.754 34.615 0.00 0.00 0.00 3.06
4144 6117 8.091449 ACTCTCTTCGTTTCAAAATAGATGACT 58.909 33.333 0.00 0.00 0.00 3.41
4145 6118 8.467402 TCTCTTCGTTTCAAAATAGATGACTC 57.533 34.615 0.00 0.00 0.00 3.36
4146 6119 8.088365 TCTCTTCGTTTCAAAATAGATGACTCA 58.912 33.333 0.00 0.00 0.00 3.41
4147 6120 8.601845 TCTTCGTTTCAAAATAGATGACTCAA 57.398 30.769 0.00 0.00 0.00 3.02
4148 6121 9.219603 TCTTCGTTTCAAAATAGATGACTCAAT 57.780 29.630 0.00 0.00 0.00 2.57
4149 6122 9.831737 CTTCGTTTCAAAATAGATGACTCAATT 57.168 29.630 0.00 0.00 0.00 2.32
4192 6165 7.881775 AAAGTTGGGTCATCTATTATGGAAC 57.118 36.000 0.00 0.00 0.00 3.62
4193 6166 5.611374 AGTTGGGTCATCTATTATGGAACG 58.389 41.667 0.00 0.00 0.00 3.95
4194 6167 4.617253 TGGGTCATCTATTATGGAACGG 57.383 45.455 0.00 0.00 0.00 4.44
4195 6168 4.228010 TGGGTCATCTATTATGGAACGGA 58.772 43.478 0.00 0.00 0.00 4.69
4196 6169 4.283467 TGGGTCATCTATTATGGAACGGAG 59.717 45.833 0.00 0.00 0.00 4.63
4197 6170 4.322801 GGGTCATCTATTATGGAACGGAGG 60.323 50.000 0.00 0.00 0.00 4.30
4198 6171 4.322801 GGTCATCTATTATGGAACGGAGGG 60.323 50.000 0.00 0.00 0.00 4.30
4283 6392 2.126424 GCTGAGACACGGTCGACC 60.126 66.667 25.28 25.28 37.67 4.79
4286 6395 1.516365 CTGAGACACGGTCGACCAGT 61.516 60.000 32.80 28.55 37.67 4.00
4381 6493 1.205568 CTTTGCTTCGCCGCGTTAA 59.794 52.632 13.39 0.00 0.00 2.01
4382 6494 0.179200 CTTTGCTTCGCCGCGTTAAT 60.179 50.000 13.39 0.00 0.00 1.40
4383 6495 0.453615 TTTGCTTCGCCGCGTTAATG 60.454 50.000 13.39 0.00 0.00 1.90
4388 6500 1.363145 TTCGCCGCGTTAATGAAGGG 61.363 55.000 13.39 0.00 0.00 3.95
4483 6607 3.296709 GAGATGCGGTGTGGACGGT 62.297 63.158 0.00 0.00 0.00 4.83
4500 6624 3.449227 TAGAGACCACGGCGGCTG 61.449 66.667 13.24 7.39 39.03 4.85
4521 6645 4.278513 TGGGCCGGGTTCCACTTG 62.279 66.667 2.18 0.00 0.00 3.16
4526 6650 3.966543 CGGGTTCCACTTGGGCCT 61.967 66.667 4.53 0.00 36.21 5.19
4527 6651 2.598787 CGGGTTCCACTTGGGCCTA 61.599 63.158 4.53 0.00 36.21 3.93
4528 6652 1.921869 CGGGTTCCACTTGGGCCTAT 61.922 60.000 4.53 0.00 36.21 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 88 3.876589 TTGGGTTGCGGTCGAGAGC 62.877 63.158 5.20 5.20 0.00 4.09
84 89 2.027625 GTTGGGTTGCGGTCGAGAG 61.028 63.158 0.00 0.00 0.00 3.20
85 90 2.029964 GTTGGGTTGCGGTCGAGA 59.970 61.111 0.00 0.00 0.00 4.04
86 91 3.047877 GGTTGGGTTGCGGTCGAG 61.048 66.667 0.00 0.00 0.00 4.04
87 92 4.973055 CGGTTGGGTTGCGGTCGA 62.973 66.667 0.00 0.00 0.00 4.20
139 144 4.849329 CGGTCAGCGTAGACGGCC 62.849 72.222 3.97 0.00 39.42 6.13
159 164 0.665068 TCAGCGTAACGTGCATTCGT 60.665 50.000 0.00 0.00 46.19 3.85
167 172 1.915614 ATCGACGGTCAGCGTAACGT 61.916 55.000 0.00 4.02 42.88 3.99
171 176 2.705220 CGATCGACGGTCAGCGTA 59.295 61.111 10.26 0.00 38.46 4.42
248 274 1.543429 GGACGGTGGATTGGATGGATC 60.543 57.143 0.00 0.00 0.00 3.36
249 275 0.474184 GGACGGTGGATTGGATGGAT 59.526 55.000 0.00 0.00 0.00 3.41
250 276 1.632018 GGGACGGTGGATTGGATGGA 61.632 60.000 0.00 0.00 0.00 3.41
251 277 1.152963 GGGACGGTGGATTGGATGG 60.153 63.158 0.00 0.00 0.00 3.51
252 278 4.559502 GGGACGGTGGATTGGATG 57.440 61.111 0.00 0.00 0.00 3.51
270 296 4.500116 GTCGCAGGAGGGCTCGAC 62.500 72.222 0.00 0.00 43.23 4.20
289 315 2.322999 GATTTCCATGCGTGCCCGTC 62.323 60.000 0.00 0.00 36.15 4.79
290 316 2.361104 ATTTCCATGCGTGCCCGT 60.361 55.556 0.00 0.00 36.15 5.28
291 317 1.932011 TTGATTTCCATGCGTGCCCG 61.932 55.000 0.00 0.00 37.07 6.13
292 318 0.458370 GTTGATTTCCATGCGTGCCC 60.458 55.000 0.00 0.00 0.00 5.36
293 319 0.798009 CGTTGATTTCCATGCGTGCC 60.798 55.000 0.00 0.00 0.00 5.01
294 320 0.167908 TCGTTGATTTCCATGCGTGC 59.832 50.000 0.00 0.00 0.00 5.34
295 321 1.202065 CCTCGTTGATTTCCATGCGTG 60.202 52.381 0.00 0.00 0.00 5.34
296 322 1.086696 CCTCGTTGATTTCCATGCGT 58.913 50.000 0.00 0.00 0.00 5.24
297 323 1.086696 ACCTCGTTGATTTCCATGCG 58.913 50.000 0.00 0.00 0.00 4.73
298 324 1.468054 GCACCTCGTTGATTTCCATGC 60.468 52.381 0.00 0.00 0.00 4.06
299 325 1.202065 CGCACCTCGTTGATTTCCATG 60.202 52.381 0.00 0.00 0.00 3.66
300 326 1.086696 CGCACCTCGTTGATTTCCAT 58.913 50.000 0.00 0.00 0.00 3.41
301 327 0.953471 CCGCACCTCGTTGATTTCCA 60.953 55.000 0.00 0.00 36.19 3.53
302 328 0.672401 TCCGCACCTCGTTGATTTCC 60.672 55.000 0.00 0.00 36.19 3.13
303 329 1.153353 TTCCGCACCTCGTTGATTTC 58.847 50.000 0.00 0.00 36.19 2.17
304 330 1.535462 CTTTCCGCACCTCGTTGATTT 59.465 47.619 0.00 0.00 36.19 2.17
305 331 1.156736 CTTTCCGCACCTCGTTGATT 58.843 50.000 0.00 0.00 36.19 2.57
306 332 0.673644 CCTTTCCGCACCTCGTTGAT 60.674 55.000 0.00 0.00 36.19 2.57
307 333 1.301401 CCTTTCCGCACCTCGTTGA 60.301 57.895 0.00 0.00 36.19 3.18
308 334 2.966309 GCCTTTCCGCACCTCGTTG 61.966 63.158 0.00 0.00 36.19 4.10
309 335 2.668550 GCCTTTCCGCACCTCGTT 60.669 61.111 0.00 0.00 36.19 3.85
318 344 2.787249 CATGTGAGCGCCTTTCCG 59.213 61.111 2.29 0.00 0.00 4.30
319 345 2.262471 CTGCATGTGAGCGCCTTTCC 62.262 60.000 2.29 0.00 37.31 3.13
320 346 1.136147 CTGCATGTGAGCGCCTTTC 59.864 57.895 2.29 0.00 37.31 2.62
321 347 2.986306 GCTGCATGTGAGCGCCTTT 61.986 57.895 2.29 0.00 37.31 3.11
322 348 3.437795 GCTGCATGTGAGCGCCTT 61.438 61.111 2.29 0.00 37.31 4.35
342 368 2.435938 ATTGGTGGTGCTACGGCG 60.436 61.111 4.80 4.80 42.25 6.46
343 369 2.112815 GGATTGGTGGTGCTACGGC 61.113 63.158 0.00 0.00 39.26 5.68
344 370 0.035439 AAGGATTGGTGGTGCTACGG 60.035 55.000 0.00 0.00 0.00 4.02
345 371 1.369625 GAAGGATTGGTGGTGCTACG 58.630 55.000 0.00 0.00 0.00 3.51
346 372 1.751437 GGAAGGATTGGTGGTGCTAC 58.249 55.000 0.00 0.00 0.00 3.58
347 373 0.251916 CGGAAGGATTGGTGGTGCTA 59.748 55.000 0.00 0.00 0.00 3.49
348 374 1.002134 CGGAAGGATTGGTGGTGCT 60.002 57.895 0.00 0.00 0.00 4.40
349 375 1.303317 ACGGAAGGATTGGTGGTGC 60.303 57.895 0.00 0.00 0.00 5.01
350 376 0.324943 AGACGGAAGGATTGGTGGTG 59.675 55.000 0.00 0.00 0.00 4.17
351 377 0.324943 CAGACGGAAGGATTGGTGGT 59.675 55.000 0.00 0.00 0.00 4.16
352 378 1.026718 GCAGACGGAAGGATTGGTGG 61.027 60.000 0.00 0.00 0.00 4.61
353 379 0.321564 TGCAGACGGAAGGATTGGTG 60.322 55.000 0.00 0.00 0.00 4.17
354 380 0.321653 GTGCAGACGGAAGGATTGGT 60.322 55.000 0.00 0.00 0.00 3.67
355 381 1.361668 CGTGCAGACGGAAGGATTGG 61.362 60.000 0.00 0.00 42.18 3.16
356 382 1.970917 GCGTGCAGACGGAAGGATTG 61.971 60.000 0.00 0.00 46.20 2.67
357 383 1.741770 GCGTGCAGACGGAAGGATT 60.742 57.895 0.00 0.00 46.20 3.01
358 384 2.125512 GCGTGCAGACGGAAGGAT 60.126 61.111 0.00 0.00 46.20 3.24
359 385 3.303135 AGCGTGCAGACGGAAGGA 61.303 61.111 0.00 0.00 46.20 3.36
360 386 3.114616 CAGCGTGCAGACGGAAGG 61.115 66.667 0.00 0.00 46.20 3.46
361 387 3.782244 GCAGCGTGCAGACGGAAG 61.782 66.667 5.30 0.00 46.20 3.46
377 403 4.962836 ACCACCTGCTGCACCTGC 62.963 66.667 0.00 0.00 42.50 4.85
378 404 2.981909 CACCACCTGCTGCACCTG 60.982 66.667 0.00 0.00 0.00 4.00
379 405 4.962836 GCACCACCTGCTGCACCT 62.963 66.667 0.00 0.00 43.33 4.00
393 419 2.182614 ATTTAGCACACGCACGGCAC 62.183 55.000 0.00 0.00 42.27 5.01
394 420 1.963855 ATTTAGCACACGCACGGCA 60.964 52.632 0.00 0.00 42.27 5.69
395 421 1.511887 CATTTAGCACACGCACGGC 60.512 57.895 0.00 0.00 42.27 5.68
396 422 1.511887 GCATTTAGCACACGCACGG 60.512 57.895 0.00 0.00 44.79 4.94
397 423 4.041026 GCATTTAGCACACGCACG 57.959 55.556 0.00 0.00 44.79 5.34
406 432 4.823989 AGAGAGAGAGAGAGAGCATTTAGC 59.176 45.833 0.00 0.00 46.19 3.09
407 433 6.017605 GTCAGAGAGAGAGAGAGAGCATTTAG 60.018 46.154 0.00 0.00 0.00 1.85
408 434 5.822519 GTCAGAGAGAGAGAGAGAGCATTTA 59.177 44.000 0.00 0.00 0.00 1.40
409 435 4.641989 GTCAGAGAGAGAGAGAGAGCATTT 59.358 45.833 0.00 0.00 0.00 2.32
410 436 4.202441 GTCAGAGAGAGAGAGAGAGCATT 58.798 47.826 0.00 0.00 0.00 3.56
411 437 3.742327 CGTCAGAGAGAGAGAGAGAGCAT 60.742 52.174 0.00 0.00 0.00 3.79
412 438 2.418609 CGTCAGAGAGAGAGAGAGAGCA 60.419 54.545 0.00 0.00 0.00 4.26
413 439 2.205074 CGTCAGAGAGAGAGAGAGAGC 58.795 57.143 0.00 0.00 0.00 4.09
414 440 2.168521 ACCGTCAGAGAGAGAGAGAGAG 59.831 54.545 0.00 0.00 0.00 3.20
415 441 2.184533 ACCGTCAGAGAGAGAGAGAGA 58.815 52.381 0.00 0.00 0.00 3.10
416 442 2.691409 ACCGTCAGAGAGAGAGAGAG 57.309 55.000 0.00 0.00 0.00 3.20
417 443 2.832733 TGTACCGTCAGAGAGAGAGAGA 59.167 50.000 0.00 0.00 0.00 3.10
418 444 2.933906 GTGTACCGTCAGAGAGAGAGAG 59.066 54.545 0.00 0.00 0.00 3.20
419 445 2.674462 CGTGTACCGTCAGAGAGAGAGA 60.674 54.545 0.00 0.00 0.00 3.10
420 446 1.661617 CGTGTACCGTCAGAGAGAGAG 59.338 57.143 0.00 0.00 0.00 3.20
421 447 1.723220 CGTGTACCGTCAGAGAGAGA 58.277 55.000 0.00 0.00 0.00 3.10
422 448 0.097325 GCGTGTACCGTCAGAGAGAG 59.903 60.000 5.79 0.00 39.32 3.20
423 449 1.303799 GGCGTGTACCGTCAGAGAGA 61.304 60.000 3.88 0.00 41.97 3.10
424 450 1.136984 GGCGTGTACCGTCAGAGAG 59.863 63.158 3.88 0.00 41.97 3.20
425 451 2.338015 GGGCGTGTACCGTCAGAGA 61.338 63.158 9.89 0.00 44.95 3.10
426 452 2.181021 GGGCGTGTACCGTCAGAG 59.819 66.667 9.89 0.00 44.95 3.35
427 453 2.598099 TGGGCGTGTACCGTCAGA 60.598 61.111 9.89 0.00 44.95 3.27
428 454 2.431942 GTGGGCGTGTACCGTCAG 60.432 66.667 9.89 0.00 44.95 3.51
429 455 3.993584 GGTGGGCGTGTACCGTCA 61.994 66.667 9.89 4.89 44.95 4.35
430 456 4.747529 GGGTGGGCGTGTACCGTC 62.748 72.222 5.79 3.24 41.54 4.79
432 458 4.317444 TTGGGTGGGCGTGTACCG 62.317 66.667 0.00 0.00 37.85 4.02
433 459 2.359478 CTTGGGTGGGCGTGTACC 60.359 66.667 0.00 0.00 36.21 3.34
434 460 1.670083 GTCTTGGGTGGGCGTGTAC 60.670 63.158 0.00 0.00 0.00 2.90
435 461 1.697082 TTGTCTTGGGTGGGCGTGTA 61.697 55.000 0.00 0.00 0.00 2.90
436 462 2.958578 CTTGTCTTGGGTGGGCGTGT 62.959 60.000 0.00 0.00 0.00 4.49
437 463 2.203280 TTGTCTTGGGTGGGCGTG 60.203 61.111 0.00 0.00 0.00 5.34
438 464 2.113139 CTTGTCTTGGGTGGGCGT 59.887 61.111 0.00 0.00 0.00 5.68
439 465 2.672996 CCTTGTCTTGGGTGGGCG 60.673 66.667 0.00 0.00 0.00 6.13
440 466 2.991540 GCCTTGTCTTGGGTGGGC 60.992 66.667 0.00 0.00 0.00 5.36
441 467 1.152567 TTGCCTTGTCTTGGGTGGG 60.153 57.895 0.00 0.00 0.00 4.61
442 468 1.795170 CGTTGCCTTGTCTTGGGTGG 61.795 60.000 0.00 0.00 0.00 4.61
443 469 1.654220 CGTTGCCTTGTCTTGGGTG 59.346 57.895 0.00 0.00 0.00 4.61
444 470 1.528309 CCGTTGCCTTGTCTTGGGT 60.528 57.895 0.00 0.00 0.00 4.51
445 471 0.609131 ATCCGTTGCCTTGTCTTGGG 60.609 55.000 0.00 0.00 0.00 4.12
446 472 1.247567 AATCCGTTGCCTTGTCTTGG 58.752 50.000 0.00 0.00 0.00 3.61
447 473 2.351738 GGAAATCCGTTGCCTTGTCTTG 60.352 50.000 0.00 0.00 0.00 3.02
448 474 1.886542 GGAAATCCGTTGCCTTGTCTT 59.113 47.619 0.00 0.00 0.00 3.01
449 475 1.534729 GGAAATCCGTTGCCTTGTCT 58.465 50.000 0.00 0.00 0.00 3.41
450 476 0.526211 GGGAAATCCGTTGCCTTGTC 59.474 55.000 0.00 0.00 44.21 3.18
451 477 2.653557 GGGAAATCCGTTGCCTTGT 58.346 52.632 0.00 0.00 44.21 3.16
456 482 2.426738 TGATTGATGGGAAATCCGTTGC 59.573 45.455 0.00 0.00 38.76 4.17
457 483 3.696051 AGTGATTGATGGGAAATCCGTTG 59.304 43.478 0.00 0.00 38.76 4.10
458 484 3.696051 CAGTGATTGATGGGAAATCCGTT 59.304 43.478 0.00 0.00 38.76 4.44
459 485 3.282021 CAGTGATTGATGGGAAATCCGT 58.718 45.455 0.00 0.00 38.76 4.69
460 486 3.065786 CACAGTGATTGATGGGAAATCCG 59.934 47.826 0.00 0.00 38.76 4.18
461 487 4.019174 ACACAGTGATTGATGGGAAATCC 58.981 43.478 7.81 0.00 33.85 3.01
462 488 6.949352 ATACACAGTGATTGATGGGAAATC 57.051 37.500 7.81 0.00 35.10 2.17
463 489 7.577303 AGTATACACAGTGATTGATGGGAAAT 58.423 34.615 7.81 0.00 0.00 2.17
464 490 6.957631 AGTATACACAGTGATTGATGGGAAA 58.042 36.000 7.81 0.00 0.00 3.13
465 491 6.156083 TGAGTATACACAGTGATTGATGGGAA 59.844 38.462 7.81 0.00 0.00 3.97
466 492 5.660864 TGAGTATACACAGTGATTGATGGGA 59.339 40.000 7.81 0.00 0.00 4.37
467 493 5.917462 TGAGTATACACAGTGATTGATGGG 58.083 41.667 7.81 0.00 0.00 4.00
468 494 9.716531 ATTATGAGTATACACAGTGATTGATGG 57.283 33.333 7.81 0.00 0.00 3.51
484 510 7.746034 CGCGTGCATTGATTAAATTATGAGTAT 59.254 33.333 0.00 0.00 0.00 2.12
485 511 7.042389 TCGCGTGCATTGATTAAATTATGAGTA 60.042 33.333 5.77 0.00 0.00 2.59
486 512 5.909054 CGCGTGCATTGATTAAATTATGAGT 59.091 36.000 0.00 0.00 0.00 3.41
487 513 6.085458 GTCGCGTGCATTGATTAAATTATGAG 59.915 38.462 5.77 0.00 0.00 2.90
488 514 5.906838 GTCGCGTGCATTGATTAAATTATGA 59.093 36.000 5.77 0.00 0.00 2.15
489 515 5.164386 CGTCGCGTGCATTGATTAAATTATG 60.164 40.000 5.77 0.00 0.00 1.90
490 516 4.903585 CGTCGCGTGCATTGATTAAATTAT 59.096 37.500 5.77 0.00 0.00 1.28
491 517 4.033014 TCGTCGCGTGCATTGATTAAATTA 59.967 37.500 5.77 0.00 0.00 1.40
492 518 3.097910 CGTCGCGTGCATTGATTAAATT 58.902 40.909 5.77 0.00 0.00 1.82
493 519 2.350192 TCGTCGCGTGCATTGATTAAAT 59.650 40.909 5.77 0.00 0.00 1.40
494 520 1.727335 TCGTCGCGTGCATTGATTAAA 59.273 42.857 5.77 0.00 0.00 1.52
495 521 1.351153 TCGTCGCGTGCATTGATTAA 58.649 45.000 5.77 0.00 0.00 1.40
496 522 1.257675 CATCGTCGCGTGCATTGATTA 59.742 47.619 5.77 0.00 0.00 1.75
497 523 0.026674 CATCGTCGCGTGCATTGATT 59.973 50.000 5.77 0.00 0.00 2.57
498 524 0.805711 TCATCGTCGCGTGCATTGAT 60.806 50.000 5.77 0.00 0.00 2.57
499 525 0.805711 ATCATCGTCGCGTGCATTGA 60.806 50.000 5.77 5.01 0.00 2.57
500 526 0.852136 TATCATCGTCGCGTGCATTG 59.148 50.000 5.77 0.00 0.00 2.82
501 527 1.131771 CTATCATCGTCGCGTGCATT 58.868 50.000 5.77 0.00 0.00 3.56
502 528 0.310854 TCTATCATCGTCGCGTGCAT 59.689 50.000 5.77 0.00 0.00 3.96
503 529 0.317020 CTCTATCATCGTCGCGTGCA 60.317 55.000 5.77 0.00 0.00 4.57
504 530 0.317103 ACTCTATCATCGTCGCGTGC 60.317 55.000 5.77 0.00 0.00 5.34
505 531 1.660614 GGACTCTATCATCGTCGCGTG 60.661 57.143 5.77 0.00 0.00 5.34
506 532 0.587285 GGACTCTATCATCGTCGCGT 59.413 55.000 5.77 0.00 0.00 6.01
507 533 0.451299 CGGACTCTATCATCGTCGCG 60.451 60.000 0.00 0.00 0.00 5.87
508 534 0.726452 GCGGACTCTATCATCGTCGC 60.726 60.000 0.00 0.00 0.00 5.19
509 535 0.451299 CGCGGACTCTATCATCGTCG 60.451 60.000 0.00 0.00 0.00 5.12
510 536 0.110147 CCGCGGACTCTATCATCGTC 60.110 60.000 24.07 0.00 0.00 4.20
511 537 1.516365 CCCGCGGACTCTATCATCGT 61.516 60.000 30.73 0.00 0.00 3.73
512 538 1.210413 CCCGCGGACTCTATCATCG 59.790 63.158 30.73 0.00 0.00 3.84
513 539 0.959553 TTCCCGCGGACTCTATCATC 59.040 55.000 30.73 0.00 0.00 2.92
514 540 1.273606 CATTCCCGCGGACTCTATCAT 59.726 52.381 30.73 3.05 0.00 2.45
515 541 0.673985 CATTCCCGCGGACTCTATCA 59.326 55.000 30.73 0.39 0.00 2.15
516 542 0.667792 GCATTCCCGCGGACTCTATC 60.668 60.000 30.73 5.32 0.00 2.08
517 543 1.367840 GCATTCCCGCGGACTCTAT 59.632 57.895 30.73 9.16 0.00 1.98
518 544 1.399744 ATGCATTCCCGCGGACTCTA 61.400 55.000 30.73 8.68 33.35 2.43
519 545 2.735772 ATGCATTCCCGCGGACTCT 61.736 57.895 30.73 5.01 33.35 3.24
520 546 2.203070 ATGCATTCCCGCGGACTC 60.203 61.111 30.73 11.24 33.35 3.36
521 547 2.514592 CATGCATTCCCGCGGACT 60.515 61.111 30.73 7.60 33.35 3.85
522 548 2.513666 TCATGCATTCCCGCGGAC 60.514 61.111 30.73 10.97 33.35 4.79
523 549 2.513666 GTCATGCATTCCCGCGGA 60.514 61.111 30.73 8.21 33.35 5.54
524 550 3.940640 CGTCATGCATTCCCGCGG 61.941 66.667 21.04 21.04 33.35 6.46
525 551 3.940640 CCGTCATGCATTCCCGCG 61.941 66.667 0.00 0.00 33.35 6.46
526 552 4.256090 GCCGTCATGCATTCCCGC 62.256 66.667 0.00 0.00 0.00 6.13
527 553 3.940640 CGCCGTCATGCATTCCCG 61.941 66.667 0.00 0.00 0.00 5.14
528 554 2.513666 TCGCCGTCATGCATTCCC 60.514 61.111 0.00 0.00 0.00 3.97
529 555 0.882042 ATCTCGCCGTCATGCATTCC 60.882 55.000 0.00 0.00 0.00 3.01
530 556 0.510359 GATCTCGCCGTCATGCATTC 59.490 55.000 0.00 0.00 0.00 2.67
531 557 0.105593 AGATCTCGCCGTCATGCATT 59.894 50.000 0.00 0.00 0.00 3.56
532 558 0.319383 GAGATCTCGCCGTCATGCAT 60.319 55.000 7.04 0.00 0.00 3.96
533 559 1.066422 GAGATCTCGCCGTCATGCA 59.934 57.895 7.04 0.00 0.00 3.96
534 560 0.938637 CTGAGATCTCGCCGTCATGC 60.939 60.000 17.76 0.00 0.00 4.06
535 561 0.383590 ACTGAGATCTCGCCGTCATG 59.616 55.000 17.76 3.44 0.00 3.07
536 562 1.107114 AACTGAGATCTCGCCGTCAT 58.893 50.000 17.76 0.00 0.00 3.06
537 563 0.888619 AAACTGAGATCTCGCCGTCA 59.111 50.000 17.76 0.00 0.00 4.35
538 564 1.272781 CAAACTGAGATCTCGCCGTC 58.727 55.000 17.76 0.00 0.00 4.79
539 565 0.108615 CCAAACTGAGATCTCGCCGT 60.109 55.000 17.76 11.53 0.00 5.68
540 566 0.108615 ACCAAACTGAGATCTCGCCG 60.109 55.000 17.76 10.92 0.00 6.46
541 567 2.003301 GAACCAAACTGAGATCTCGCC 58.997 52.381 17.76 0.00 0.00 5.54
542 568 2.003301 GGAACCAAACTGAGATCTCGC 58.997 52.381 17.76 0.00 0.00 5.03
543 569 3.257393 CTGGAACCAAACTGAGATCTCG 58.743 50.000 17.76 14.22 0.00 4.04
544 570 3.006247 GCTGGAACCAAACTGAGATCTC 58.994 50.000 16.21 16.21 0.00 2.75
545 571 2.613977 CGCTGGAACCAAACTGAGATCT 60.614 50.000 0.00 0.00 0.00 2.75
546 572 1.734465 CGCTGGAACCAAACTGAGATC 59.266 52.381 0.00 0.00 0.00 2.75
547 573 1.072331 ACGCTGGAACCAAACTGAGAT 59.928 47.619 0.00 0.00 0.00 2.75
548 574 0.468226 ACGCTGGAACCAAACTGAGA 59.532 50.000 0.00 0.00 0.00 3.27
549 575 0.868406 GACGCTGGAACCAAACTGAG 59.132 55.000 0.00 0.00 0.00 3.35
550 576 0.878523 CGACGCTGGAACCAAACTGA 60.879 55.000 0.00 0.00 0.00 3.41
551 577 1.157870 ACGACGCTGGAACCAAACTG 61.158 55.000 0.00 0.00 0.00 3.16
552 578 1.145377 ACGACGCTGGAACCAAACT 59.855 52.632 0.00 0.00 0.00 2.66
553 579 1.278637 CACGACGCTGGAACCAAAC 59.721 57.895 0.00 0.00 0.00 2.93
554 580 1.890041 CCACGACGCTGGAACCAAA 60.890 57.895 9.93 0.00 32.30 3.28
555 581 2.280524 CCACGACGCTGGAACCAA 60.281 61.111 9.93 0.00 32.30 3.67
556 582 4.980805 GCCACGACGCTGGAACCA 62.981 66.667 17.18 0.00 32.30 3.67
558 584 4.980805 TGGCCACGACGCTGGAAC 62.981 66.667 17.18 10.76 32.30 3.62
559 585 4.680237 CTGGCCACGACGCTGGAA 62.680 66.667 17.18 6.45 32.30 3.53
562 588 4.662961 TGTCTGGCCACGACGCTG 62.663 66.667 22.32 5.41 34.17 5.18
563 589 4.363990 CTGTCTGGCCACGACGCT 62.364 66.667 22.32 0.00 34.17 5.07
564 590 4.357947 TCTGTCTGGCCACGACGC 62.358 66.667 22.32 7.84 34.17 5.19
565 591 2.126307 CTCTGTCTGGCCACGACG 60.126 66.667 22.32 18.20 34.17 5.12
566 592 0.946221 CAACTCTGTCTGGCCACGAC 60.946 60.000 21.58 21.58 0.00 4.34
567 593 1.367471 CAACTCTGTCTGGCCACGA 59.633 57.895 0.00 0.02 0.00 4.35
568 594 2.320587 GCAACTCTGTCTGGCCACG 61.321 63.158 0.00 0.00 0.00 4.94
569 595 0.321671 TAGCAACTCTGTCTGGCCAC 59.678 55.000 0.00 0.00 0.00 5.01
570 596 0.610174 CTAGCAACTCTGTCTGGCCA 59.390 55.000 4.71 4.71 0.00 5.36
571 597 0.610687 ACTAGCAACTCTGTCTGGCC 59.389 55.000 0.00 0.00 0.00 5.36
572 598 2.494073 ACTACTAGCAACTCTGTCTGGC 59.506 50.000 0.00 0.00 0.00 4.85
573 599 6.458232 AATACTACTAGCAACTCTGTCTGG 57.542 41.667 0.00 0.00 0.00 3.86
574 600 6.195868 CGAATACTACTAGCAACTCTGTCTG 58.804 44.000 0.00 0.00 0.00 3.51
575 601 5.297278 CCGAATACTACTAGCAACTCTGTCT 59.703 44.000 0.00 0.00 0.00 3.41
576 602 5.296283 TCCGAATACTACTAGCAACTCTGTC 59.704 44.000 0.00 0.00 0.00 3.51
577 603 5.191426 TCCGAATACTACTAGCAACTCTGT 58.809 41.667 0.00 0.00 0.00 3.41
578 604 5.752892 TCCGAATACTACTAGCAACTCTG 57.247 43.478 0.00 0.00 0.00 3.35
579 605 6.016108 GGAATCCGAATACTACTAGCAACTCT 60.016 42.308 0.00 0.00 0.00 3.24
580 606 6.151004 GGAATCCGAATACTACTAGCAACTC 58.849 44.000 0.00 0.00 0.00 3.01
581 607 5.010820 GGGAATCCGAATACTACTAGCAACT 59.989 44.000 0.00 0.00 0.00 3.16
582 608 5.010820 AGGGAATCCGAATACTACTAGCAAC 59.989 44.000 0.00 0.00 38.33 4.17
583 609 5.145564 AGGGAATCCGAATACTACTAGCAA 58.854 41.667 0.00 0.00 38.33 3.91
584 610 4.737578 AGGGAATCCGAATACTACTAGCA 58.262 43.478 0.00 0.00 38.33 3.49
585 611 4.158209 GGAGGGAATCCGAATACTACTAGC 59.842 50.000 0.00 0.00 38.67 3.42
586 612 5.900865 GGAGGGAATCCGAATACTACTAG 57.099 47.826 0.00 0.00 38.67 2.57
618 644 2.184323 TCTGCGGTCAGAGTAGCTG 58.816 57.895 0.00 0.00 43.95 4.24
636 662 5.656480 GTGGTCGGGCATTGTATTATTTTT 58.344 37.500 0.00 0.00 0.00 1.94
637 663 4.201970 CGTGGTCGGGCATTGTATTATTTT 60.202 41.667 0.00 0.00 0.00 1.82
638 664 3.314080 CGTGGTCGGGCATTGTATTATTT 59.686 43.478 0.00 0.00 0.00 1.40
641 667 1.942677 CGTGGTCGGGCATTGTATTA 58.057 50.000 0.00 0.00 0.00 0.98
658 684 2.672996 GCCCATGTTGCTGACCGT 60.673 61.111 0.00 0.00 0.00 4.83
674 700 2.338577 ATAATGCTCCAGTGTCCAGC 57.661 50.000 0.00 0.00 0.00 4.85
679 705 8.757982 ATTTGAATAGAATAATGCTCCAGTGT 57.242 30.769 0.00 0.00 0.00 3.55
680 706 9.674824 GAATTTGAATAGAATAATGCTCCAGTG 57.325 33.333 0.00 0.00 0.00 3.66
681 707 8.854117 GGAATTTGAATAGAATAATGCTCCAGT 58.146 33.333 0.00 0.00 0.00 4.00
682 708 9.075678 AGGAATTTGAATAGAATAATGCTCCAG 57.924 33.333 0.00 0.00 0.00 3.86
683 709 9.071276 GAGGAATTTGAATAGAATAATGCTCCA 57.929 33.333 0.00 0.00 0.00 3.86
686 712 7.308830 GCCGAGGAATTTGAATAGAATAATGCT 60.309 37.037 0.00 0.00 0.00 3.79
688 714 7.017645 CGCCGAGGAATTTGAATAGAATAATG 58.982 38.462 0.00 0.00 0.00 1.90
721 748 5.118510 CCAAATTCGTATGCCTGTGTTTTTC 59.881 40.000 0.00 0.00 0.00 2.29
722 749 4.987912 CCAAATTCGTATGCCTGTGTTTTT 59.012 37.500 0.00 0.00 0.00 1.94
775 802 0.666913 GCCTAGCATGTGCCATTGAG 59.333 55.000 0.57 0.00 43.38 3.02
855 886 2.497675 AGACGGATCGATGGATAATGGG 59.502 50.000 0.54 0.00 31.51 4.00
880 911 5.487488 TGATCAAGTTGGGTGTAGTCCTAAT 59.513 40.000 2.34 0.00 31.10 1.73
912 943 0.796312 TGATTGAACGGCGAGAAAGC 59.204 50.000 16.62 7.71 0.00 3.51
923 954 5.841957 AGTGGGCATAGATTTGATTGAAC 57.158 39.130 0.00 0.00 0.00 3.18
956 987 2.864882 GCAGCCGTGTTAGTAGTTGTGA 60.865 50.000 0.00 0.00 0.00 3.58
960 991 1.607251 GGTGCAGCCGTGTTAGTAGTT 60.607 52.381 4.03 0.00 0.00 2.24
1007 1038 6.033831 GTGGTGATTTACTGATTTGATTTGCG 59.966 38.462 0.00 0.00 0.00 4.85
1067 1102 0.528684 GATCGGAAGGGAGCAAGACG 60.529 60.000 0.00 0.00 0.00 4.18
1068 1103 0.528684 CGATCGGAAGGGAGCAAGAC 60.529 60.000 7.38 0.00 0.00 3.01
1069 1104 0.683179 TCGATCGGAAGGGAGCAAGA 60.683 55.000 16.41 0.00 0.00 3.02
1073 1108 0.249114 GTTCTCGATCGGAAGGGAGC 60.249 60.000 16.41 4.93 0.00 4.70
1074 1109 0.029567 CGTTCTCGATCGGAAGGGAG 59.970 60.000 16.41 3.96 39.71 4.30
1075 1110 2.104267 CGTTCTCGATCGGAAGGGA 58.896 57.895 16.41 3.66 39.71 4.20
1076 1111 4.711980 CGTTCTCGATCGGAAGGG 57.288 61.111 16.41 8.64 39.71 3.95
1175 1210 4.803426 GACGTGGGCCTGAGCGAG 62.803 72.222 4.53 0.00 41.24 5.03
1378 1413 4.728102 TACAAGGTGACGGCGGCG 62.728 66.667 31.06 31.06 0.00 6.46
1411 1449 4.059459 CGCACGCTGACCAACGTC 62.059 66.667 0.00 0.00 41.32 4.34
1852 1896 1.305219 GGCGCACCAGCTTCAACATA 61.305 55.000 10.83 0.00 39.10 2.29
2068 2112 3.834858 CTACGCGTCGTCGGATCCG 62.835 68.421 28.62 28.62 41.54 4.18
3482 3553 2.856000 ACCCCCAGTTGCAGAGCT 60.856 61.111 0.00 0.00 0.00 4.09
3493 3564 1.282653 TTCACAAGGTGACACCCCCA 61.283 55.000 21.32 0.00 42.60 4.96
3496 3567 1.247567 CCATTCACAAGGTGACACCC 58.752 55.000 21.32 3.49 42.60 4.61
3554 3625 0.257039 AATCATTTCGCTCCCCTGCT 59.743 50.000 0.00 0.00 0.00 4.24
3590 3661 1.071228 CCTCGCCATCCATTCATCTGA 59.929 52.381 0.00 0.00 0.00 3.27
3612 3683 1.466950 CTCCGTCTCACTCACTCACTC 59.533 57.143 0.00 0.00 0.00 3.51
3613 3684 1.529226 CTCCGTCTCACTCACTCACT 58.471 55.000 0.00 0.00 0.00 3.41
3614 3685 0.109504 GCTCCGTCTCACTCACTCAC 60.110 60.000 0.00 0.00 0.00 3.51
3615 3686 0.537371 TGCTCCGTCTCACTCACTCA 60.537 55.000 0.00 0.00 0.00 3.41
3641 3717 3.695825 TCCCTCTCCCTCACCCCC 61.696 72.222 0.00 0.00 0.00 5.40
3643 3719 2.760385 CGTCCCTCTCCCTCACCC 60.760 72.222 0.00 0.00 0.00 4.61
3646 3722 1.000771 CACTCGTCCCTCTCCCTCA 60.001 63.158 0.00 0.00 0.00 3.86
3712 3788 1.033746 CATGTGGAGGTGGTGATGCC 61.034 60.000 0.00 0.00 37.90 4.40
3829 3906 2.811317 GCGAGAGGCACTTGTCCG 60.811 66.667 1.05 0.00 41.55 4.79
3870 3947 8.821147 TTTTGTTTAAGCACTAGAAGATCGTA 57.179 30.769 0.00 0.00 0.00 3.43
3872 3949 7.693951 CCATTTTGTTTAAGCACTAGAAGATCG 59.306 37.037 0.00 0.00 0.00 3.69
3897 5833 1.989706 TTGTGTGGGGTTAAAGCTCC 58.010 50.000 0.00 0.00 0.00 4.70
3907 5843 3.473923 AAGCTTGATTTTTGTGTGGGG 57.526 42.857 0.00 0.00 0.00 4.96
3912 5848 6.279882 TCCCTGTTAAAGCTTGATTTTTGTG 58.720 36.000 0.00 0.00 0.00 3.33
3914 5850 6.986231 AGTTCCCTGTTAAAGCTTGATTTTTG 59.014 34.615 0.00 0.00 0.00 2.44
3920 5856 3.137544 TCCAGTTCCCTGTTAAAGCTTGA 59.862 43.478 0.00 0.00 36.95 3.02
3921 5857 3.486383 TCCAGTTCCCTGTTAAAGCTTG 58.514 45.455 0.00 0.00 36.95 4.01
3922 5858 3.876309 TCCAGTTCCCTGTTAAAGCTT 57.124 42.857 0.00 0.00 36.95 3.74
4032 5968 1.811195 CACCGGCACCGACTACATA 59.189 57.895 11.42 0.00 42.83 2.29
4033 5969 2.577059 CACCGGCACCGACTACAT 59.423 61.111 11.42 0.00 42.83 2.29
4074 6047 1.334869 GCTAATTTGCCATCACCCGAG 59.665 52.381 0.00 0.00 0.00 4.63
4085 6058 9.173939 GTATCACTGTTATCATTGCTAATTTGC 57.826 33.333 4.83 4.83 0.00 3.68
4088 6061 8.562892 GCTGTATCACTGTTATCATTGCTAATT 58.437 33.333 0.00 0.00 0.00 1.40
4089 6062 7.095481 CGCTGTATCACTGTTATCATTGCTAAT 60.095 37.037 0.00 0.00 0.00 1.73
4090 6063 6.200854 CGCTGTATCACTGTTATCATTGCTAA 59.799 38.462 0.00 0.00 0.00 3.09
4091 6064 5.691754 CGCTGTATCACTGTTATCATTGCTA 59.308 40.000 0.00 0.00 0.00 3.49
4092 6065 4.509230 CGCTGTATCACTGTTATCATTGCT 59.491 41.667 0.00 0.00 0.00 3.91
4115 6088 8.596380 CATCTATTTTGAAACGAAGAGAGTACC 58.404 37.037 0.00 0.00 0.00 3.34
4116 6089 9.355215 TCATCTATTTTGAAACGAAGAGAGTAC 57.645 33.333 0.00 0.00 0.00 2.73
4117 6090 9.355215 GTCATCTATTTTGAAACGAAGAGAGTA 57.645 33.333 0.00 0.00 0.00 2.59
4118 6091 8.091449 AGTCATCTATTTTGAAACGAAGAGAGT 58.909 33.333 0.00 0.00 0.00 3.24
4119 6092 8.472683 AGTCATCTATTTTGAAACGAAGAGAG 57.527 34.615 0.00 0.00 0.00 3.20
4120 6093 8.088365 TGAGTCATCTATTTTGAAACGAAGAGA 58.912 33.333 0.00 0.00 0.00 3.10
4121 6094 8.244494 TGAGTCATCTATTTTGAAACGAAGAG 57.756 34.615 0.00 0.00 0.00 2.85
4122 6095 8.601845 TTGAGTCATCTATTTTGAAACGAAGA 57.398 30.769 0.00 0.00 0.00 2.87
4123 6096 9.831737 AATTGAGTCATCTATTTTGAAACGAAG 57.168 29.630 0.00 0.00 28.12 3.79
4166 6139 9.574516 GTTCCATAATAGATGACCCAACTTTAT 57.425 33.333 0.00 0.00 0.00 1.40
4167 6140 7.713507 CGTTCCATAATAGATGACCCAACTTTA 59.286 37.037 0.00 0.00 0.00 1.85
4168 6141 6.542370 CGTTCCATAATAGATGACCCAACTTT 59.458 38.462 0.00 0.00 0.00 2.66
4169 6142 6.055588 CGTTCCATAATAGATGACCCAACTT 58.944 40.000 0.00 0.00 0.00 2.66
4170 6143 5.454755 CCGTTCCATAATAGATGACCCAACT 60.455 44.000 0.00 0.00 0.00 3.16
4171 6144 4.755123 CCGTTCCATAATAGATGACCCAAC 59.245 45.833 0.00 0.00 0.00 3.77
4172 6145 4.656575 TCCGTTCCATAATAGATGACCCAA 59.343 41.667 0.00 0.00 0.00 4.12
4173 6146 4.228010 TCCGTTCCATAATAGATGACCCA 58.772 43.478 0.00 0.00 0.00 4.51
4174 6147 4.322801 CCTCCGTTCCATAATAGATGACCC 60.323 50.000 0.00 0.00 0.00 4.46
4175 6148 4.322801 CCCTCCGTTCCATAATAGATGACC 60.323 50.000 0.00 0.00 0.00 4.02
4176 6149 4.527038 TCCCTCCGTTCCATAATAGATGAC 59.473 45.833 0.00 0.00 0.00 3.06
4177 6150 4.747583 TCCCTCCGTTCCATAATAGATGA 58.252 43.478 0.00 0.00 0.00 2.92
4178 6151 4.528596 ACTCCCTCCGTTCCATAATAGATG 59.471 45.833 0.00 0.00 0.00 2.90
4179 6152 4.753186 ACTCCCTCCGTTCCATAATAGAT 58.247 43.478 0.00 0.00 0.00 1.98
4180 6153 4.194678 ACTCCCTCCGTTCCATAATAGA 57.805 45.455 0.00 0.00 0.00 1.98
4181 6154 5.322754 TCTACTCCCTCCGTTCCATAATAG 58.677 45.833 0.00 0.00 0.00 1.73
4182 6155 5.329191 TCTACTCCCTCCGTTCCATAATA 57.671 43.478 0.00 0.00 0.00 0.98
4183 6156 4.194678 TCTACTCCCTCCGTTCCATAAT 57.805 45.455 0.00 0.00 0.00 1.28
4184 6157 3.675348 TCTACTCCCTCCGTTCCATAA 57.325 47.619 0.00 0.00 0.00 1.90
4185 6158 3.895656 CAATCTACTCCCTCCGTTCCATA 59.104 47.826 0.00 0.00 0.00 2.74
4186 6159 2.700897 CAATCTACTCCCTCCGTTCCAT 59.299 50.000 0.00 0.00 0.00 3.41
4187 6160 2.108168 CAATCTACTCCCTCCGTTCCA 58.892 52.381 0.00 0.00 0.00 3.53
4188 6161 1.202545 GCAATCTACTCCCTCCGTTCC 60.203 57.143 0.00 0.00 0.00 3.62
4189 6162 1.757699 AGCAATCTACTCCCTCCGTTC 59.242 52.381 0.00 0.00 0.00 3.95
4190 6163 1.482593 CAGCAATCTACTCCCTCCGTT 59.517 52.381 0.00 0.00 0.00 4.44
4191 6164 1.115467 CAGCAATCTACTCCCTCCGT 58.885 55.000 0.00 0.00 0.00 4.69
4192 6165 0.249657 GCAGCAATCTACTCCCTCCG 60.250 60.000 0.00 0.00 0.00 4.63
4193 6166 1.127343 AGCAGCAATCTACTCCCTCC 58.873 55.000 0.00 0.00 0.00 4.30
4194 6167 4.408182 TTTAGCAGCAATCTACTCCCTC 57.592 45.455 0.00 0.00 0.00 4.30
4195 6168 4.844349 TTTTAGCAGCAATCTACTCCCT 57.156 40.909 0.00 0.00 0.00 4.20
4196 6169 6.055588 TGTATTTTAGCAGCAATCTACTCCC 58.944 40.000 0.00 0.00 0.00 4.30
4197 6170 7.254932 CCTTGTATTTTAGCAGCAATCTACTCC 60.255 40.741 0.00 0.00 0.00 3.85
4198 6171 7.495934 TCCTTGTATTTTAGCAGCAATCTACTC 59.504 37.037 0.00 0.00 0.00 2.59
4283 6392 0.668535 TCGATGGCCGTATCAGACTG 59.331 55.000 0.00 0.00 39.75 3.51
4286 6395 2.341452 CCTCGATGGCCGTATCAGA 58.659 57.895 0.00 0.00 39.75 3.27
4381 6493 1.210478 CCGTGTGAATCCTCCCTTCAT 59.790 52.381 0.00 0.00 35.26 2.57
4382 6494 0.613260 CCGTGTGAATCCTCCCTTCA 59.387 55.000 0.00 0.00 0.00 3.02
4383 6495 0.902531 TCCGTGTGAATCCTCCCTTC 59.097 55.000 0.00 0.00 0.00 3.46
4483 6607 3.449227 CAGCCGCCGTGGTCTCTA 61.449 66.667 0.00 0.00 41.21 2.43
4504 6628 4.278513 CAAGTGGAACCCGGCCCA 62.279 66.667 0.00 0.00 37.80 5.36
4509 6633 1.921869 ATAGGCCCAAGTGGAACCCG 61.922 60.000 0.00 0.00 37.80 5.28
4510 6634 2.007576 ATAGGCCCAAGTGGAACCC 58.992 57.895 0.00 0.00 37.80 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.