Multiple sequence alignment - TraesCS5D01G407300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G407300 chr5D 100.000 4460 0 0 1 4460 472519325 472523784 0.000000e+00 8237.0
1 TraesCS5D01G407300 chr5D 88.088 957 108 1 1071 2021 472568522 472569478 0.000000e+00 1131.0
2 TraesCS5D01G407300 chr5D 87.802 951 107 3 1079 2023 472626836 472627783 0.000000e+00 1105.0
3 TraesCS5D01G407300 chr5D 85.645 620 89 0 2748 3367 472570558 472571177 0.000000e+00 652.0
4 TraesCS5D01G407300 chr5D 84.676 633 97 0 2747 3379 472627864 472628496 2.260000e-177 632.0
5 TraesCS5D01G407300 chr5D 95.217 230 11 0 1 230 276711126 276710897 9.120000e-97 364.0
6 TraesCS5D01G407300 chr5D 85.237 359 26 11 1 332 341715437 341715795 1.190000e-90 344.0
7 TraesCS5D01G407300 chr5D 92.241 232 16 2 1 230 410086370 410086601 1.200000e-85 327.0
8 TraesCS5D01G407300 chr5A 91.532 2905 154 38 1038 3930 592034010 592036834 0.000000e+00 3917.0
9 TraesCS5D01G407300 chr5A 88.038 953 110 3 1071 2021 592122407 592123357 0.000000e+00 1125.0
10 TraesCS5D01G407300 chr5A 86.961 951 112 3 1079 2023 592198228 592199172 0.000000e+00 1059.0
11 TraesCS5D01G407300 chr5A 96.610 531 17 1 2886 3415 55273260 55273790 0.000000e+00 880.0
12 TraesCS5D01G407300 chr5A 88.805 527 57 2 3926 4452 592051352 592051876 0.000000e+00 645.0
13 TraesCS5D01G407300 chr5A 85.745 463 36 14 545 984 592033540 592033995 3.140000e-126 462.0
14 TraesCS5D01G407300 chr5A 86.310 336 22 12 1914 2249 55272861 55273172 1.190000e-90 344.0
15 TraesCS5D01G407300 chr5A 94.000 200 12 0 332 531 592033192 592033391 2.020000e-78 303.0
16 TraesCS5D01G407300 chr5A 89.362 94 3 4 2275 2363 55273170 55273261 1.310000e-20 111.0
17 TraesCS5D01G407300 chr5B 88.108 1850 100 59 597 2438 579519704 579521441 0.000000e+00 2087.0
18 TraesCS5D01G407300 chr5B 94.359 780 35 3 2677 3451 579521435 579522210 0.000000e+00 1188.0
19 TraesCS5D01G407300 chr5B 87.789 950 102 5 1079 2021 579807425 579808367 0.000000e+00 1099.0
20 TraesCS5D01G407300 chr5B 86.686 1029 89 23 3447 4460 579522290 579523285 0.000000e+00 1098.0
21 TraesCS5D01G407300 chr5B 87.671 949 105 3 1079 2021 579590939 579591881 0.000000e+00 1094.0
22 TraesCS5D01G407300 chr5B 87.460 949 107 3 1079 2021 580073245 580074187 0.000000e+00 1083.0
23 TraesCS5D01G407300 chr5B 82.781 453 76 2 2798 3249 579405675 579405224 1.930000e-108 403.0
24 TraesCS5D01G407300 chr5B 89.695 262 17 3 332 583 579517691 579517952 4.300000e-85 326.0
25 TraesCS5D01G407300 chr3A 93.056 648 28 4 2768 3415 497759564 497758934 0.000000e+00 931.0
26 TraesCS5D01G407300 chr3A 89.684 475 27 8 1707 2181 497760016 497759564 1.790000e-163 586.0
27 TraesCS5D01G407300 chr6B 96.234 531 19 1 2886 3415 650651760 650652290 0.000000e+00 869.0
28 TraesCS5D01G407300 chr6B 90.528 549 22 11 1707 2249 650651148 650651672 0.000000e+00 699.0
29 TraesCS5D01G407300 chr6B 89.362 94 3 4 2275 2363 650651670 650651761 1.310000e-20 111.0
30 TraesCS5D01G407300 chr2A 94.350 531 16 2 2886 3415 469819551 469820068 0.000000e+00 802.0
31 TraesCS5D01G407300 chr2A 90.346 549 23 15 1707 2249 469818939 469819463 0.000000e+00 693.0
32 TraesCS5D01G407300 chr2A 87.983 233 24 3 2444 2674 663629570 663629340 5.680000e-69 272.0
33 TraesCS5D01G407300 chr2A 89.362 94 3 4 2275 2363 469819461 469819552 1.310000e-20 111.0
34 TraesCS5D01G407300 chr2A 88.732 71 7 1 2520 2590 754174816 754174747 7.950000e-13 86.1
35 TraesCS5D01G407300 chr3D 93.939 231 12 2 1 230 545697627 545697856 9.180000e-92 348.0
36 TraesCS5D01G407300 chr3D 93.562 233 12 2 1 230 468757682 468757914 1.190000e-90 344.0
37 TraesCS5D01G407300 chr3D 92.952 227 14 2 6 230 176544781 176545007 3.330000e-86 329.0
38 TraesCS5D01G407300 chr3D 91.262 103 8 1 233 334 16276709 16276811 6.020000e-29 139.0
39 TraesCS5D01G407300 chr7A 93.939 231 11 3 1 230 620842586 620842358 3.300000e-91 346.0
40 TraesCS5D01G407300 chr7A 93.506 231 14 1 1 230 565689700 565689470 4.270000e-90 342.0
41 TraesCS5D01G407300 chr7D 92.241 232 16 2 1 230 203332127 203332358 1.200000e-85 327.0
42 TraesCS5D01G407300 chr7D 77.717 368 66 9 4106 4460 596709233 596709597 1.260000e-50 211.0
43 TraesCS5D01G407300 chr7D 78.652 267 49 7 4083 4346 58787126 58787387 2.130000e-38 171.0
44 TraesCS5D01G407300 chr7D 87.736 106 12 1 231 335 107034142 107034037 6.060000e-24 122.0
45 TraesCS5D01G407300 chr7D 100.000 28 0 0 2554 2581 634776978 634777005 8.000000e-03 52.8
46 TraesCS5D01G407300 chr3B 83.750 240 32 6 2446 2684 519399094 519399327 2.090000e-53 220.0
47 TraesCS5D01G407300 chr3B 88.350 103 11 1 231 332 752700540 752700642 6.060000e-24 122.0
48 TraesCS5D01G407300 chr1B 85.787 197 23 3 2477 2671 33020000 33020193 2.100000e-48 204.0
49 TraesCS5D01G407300 chr1B 81.600 250 38 8 2429 2674 184773011 184773256 2.720000e-47 200.0
50 TraesCS5D01G407300 chr1B 92.135 89 6 1 248 335 114470225 114470313 1.680000e-24 124.0
51 TraesCS5D01G407300 chr2B 85.340 191 25 3 2445 2632 617147163 617146973 1.270000e-45 195.0
52 TraesCS5D01G407300 chr2B 87.379 103 12 1 231 332 571815560 571815662 2.820000e-22 117.0
53 TraesCS5D01G407300 chr4A 81.443 194 29 6 146 332 415852093 415851900 7.730000e-33 152.0
54 TraesCS5D01G407300 chr4A 86.792 106 13 1 231 335 601257439 601257334 2.820000e-22 117.0
55 TraesCS5D01G407300 chr6A 87.736 106 12 1 231 335 616746010 616745905 6.060000e-24 122.0
56 TraesCS5D01G407300 chr6D 86.916 107 13 1 231 336 414243899 414243793 7.840000e-23 119.0
57 TraesCS5D01G407300 chr2D 78.882 161 29 4 2517 2675 6114330 6114487 2.190000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G407300 chr5D 472519325 472523784 4459 False 8237.000000 8237 100.000000 1 4460 1 chr5D.!!$F3 4459
1 TraesCS5D01G407300 chr5D 472568522 472571177 2655 False 891.500000 1131 86.866500 1071 3367 2 chr5D.!!$F4 2296
2 TraesCS5D01G407300 chr5D 472626836 472628496 1660 False 868.500000 1105 86.239000 1079 3379 2 chr5D.!!$F5 2300
3 TraesCS5D01G407300 chr5A 592033192 592036834 3642 False 1560.666667 3917 90.425667 332 3930 3 chr5A.!!$F5 3598
4 TraesCS5D01G407300 chr5A 592122407 592123357 950 False 1125.000000 1125 88.038000 1071 2021 1 chr5A.!!$F2 950
5 TraesCS5D01G407300 chr5A 592198228 592199172 944 False 1059.000000 1059 86.961000 1079 2023 1 chr5A.!!$F3 944
6 TraesCS5D01G407300 chr5A 592051352 592051876 524 False 645.000000 645 88.805000 3926 4452 1 chr5A.!!$F1 526
7 TraesCS5D01G407300 chr5A 55272861 55273790 929 False 445.000000 880 90.760667 1914 3415 3 chr5A.!!$F4 1501
8 TraesCS5D01G407300 chr5B 579517691 579523285 5594 False 1174.750000 2087 89.712000 332 4460 4 chr5B.!!$F4 4128
9 TraesCS5D01G407300 chr5B 579807425 579808367 942 False 1099.000000 1099 87.789000 1079 2021 1 chr5B.!!$F2 942
10 TraesCS5D01G407300 chr5B 579590939 579591881 942 False 1094.000000 1094 87.671000 1079 2021 1 chr5B.!!$F1 942
11 TraesCS5D01G407300 chr5B 580073245 580074187 942 False 1083.000000 1083 87.460000 1079 2021 1 chr5B.!!$F3 942
12 TraesCS5D01G407300 chr3A 497758934 497760016 1082 True 758.500000 931 91.370000 1707 3415 2 chr3A.!!$R1 1708
13 TraesCS5D01G407300 chr6B 650651148 650652290 1142 False 559.666667 869 92.041333 1707 3415 3 chr6B.!!$F1 1708
14 TraesCS5D01G407300 chr2A 469818939 469820068 1129 False 535.333333 802 91.352667 1707 3415 3 chr2A.!!$F1 1708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
859 2769 0.039618 CTAACCAACCTGGCATGGGT 59.960 55.0 19.76 16.81 42.67 4.51 F
2033 3961 0.905337 CGGTGAGTCCCTCCCTCTTT 60.905 60.0 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 4945 0.036732 CTTGCCAGTGCCTTGTCCTA 59.963 55.0 0.00 0.0 36.33 2.94 R
3814 6693 0.179004 AAAAGGACGTGGCATGGACA 60.179 50.0 12.05 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.055580 TTCATTTTGGTGGCCGGC 58.944 55.556 21.18 21.18 0.00 6.13
18 19 1.532794 TTCATTTTGGTGGCCGGCT 60.533 52.632 28.56 0.00 0.00 5.52
19 20 1.814772 TTCATTTTGGTGGCCGGCTG 61.815 55.000 28.56 14.33 0.00 4.85
20 21 2.203625 ATTTTGGTGGCCGGCTGT 60.204 55.556 28.56 0.35 0.00 4.40
21 22 2.573083 ATTTTGGTGGCCGGCTGTG 61.573 57.895 28.56 0.00 0.00 3.66
22 23 4.514585 TTTGGTGGCCGGCTGTGT 62.515 61.111 28.56 0.00 0.00 3.72
23 24 4.514585 TTGGTGGCCGGCTGTGTT 62.515 61.111 28.56 0.00 0.00 3.32
43 44 4.688419 CGGCCGCTTGCTGTGTTG 62.688 66.667 14.67 0.00 41.73 3.33
46 47 4.688419 CCGCTTGCTGTGTTGCCG 62.688 66.667 0.00 0.00 0.00 5.69
47 48 4.688419 CGCTTGCTGTGTTGCCGG 62.688 66.667 0.00 0.00 0.00 6.13
49 50 4.688419 CTTGCTGTGTTGCCGGCG 62.688 66.667 23.90 7.24 39.68 6.46
53 54 4.680237 CTGTGTTGCCGGCGAGGA 62.680 66.667 23.90 6.59 45.00 3.71
54 55 4.980805 TGTGTTGCCGGCGAGGAC 62.981 66.667 23.90 19.29 45.00 3.85
55 56 4.980805 GTGTTGCCGGCGAGGACA 62.981 66.667 23.90 19.95 45.00 4.02
56 57 4.243008 TGTTGCCGGCGAGGACAA 62.243 61.111 23.90 6.19 45.00 3.18
57 58 3.723348 GTTGCCGGCGAGGACAAC 61.723 66.667 23.90 15.63 43.89 3.32
58 59 3.936203 TTGCCGGCGAGGACAACT 61.936 61.111 23.90 0.00 45.00 3.16
59 60 2.575893 TTGCCGGCGAGGACAACTA 61.576 57.895 23.90 0.00 45.00 2.24
60 61 1.895020 TTGCCGGCGAGGACAACTAT 61.895 55.000 23.90 0.00 45.00 2.12
61 62 1.153429 GCCGGCGAGGACAACTATT 60.153 57.895 12.58 0.00 45.00 1.73
62 63 1.152383 GCCGGCGAGGACAACTATTC 61.152 60.000 12.58 0.00 45.00 1.75
63 64 0.870307 CCGGCGAGGACAACTATTCG 60.870 60.000 9.30 0.00 45.00 3.34
64 65 0.179145 CGGCGAGGACAACTATTCGT 60.179 55.000 0.00 0.00 35.61 3.85
65 66 1.734707 CGGCGAGGACAACTATTCGTT 60.735 52.381 0.00 0.00 35.61 3.85
66 67 2.344025 GGCGAGGACAACTATTCGTTT 58.656 47.619 0.00 0.00 35.61 3.60
67 68 2.740447 GGCGAGGACAACTATTCGTTTT 59.260 45.455 0.00 0.00 35.61 2.43
68 69 3.424433 GGCGAGGACAACTATTCGTTTTG 60.424 47.826 0.00 0.00 35.61 2.44
69 70 3.424433 GCGAGGACAACTATTCGTTTTGG 60.424 47.826 0.00 0.00 35.61 3.28
70 71 3.991773 CGAGGACAACTATTCGTTTTGGA 59.008 43.478 0.00 0.00 32.27 3.53
71 72 4.091509 CGAGGACAACTATTCGTTTTGGAG 59.908 45.833 0.00 0.00 32.27 3.86
72 73 4.324267 AGGACAACTATTCGTTTTGGAGG 58.676 43.478 0.00 0.00 32.27 4.30
73 74 3.119955 GGACAACTATTCGTTTTGGAGGC 60.120 47.826 0.00 0.00 32.27 4.70
74 75 3.751518 ACAACTATTCGTTTTGGAGGCT 58.248 40.909 0.00 0.00 32.27 4.58
75 76 3.502211 ACAACTATTCGTTTTGGAGGCTG 59.498 43.478 0.00 0.00 32.27 4.85
76 77 2.711542 ACTATTCGTTTTGGAGGCTGG 58.288 47.619 0.00 0.00 0.00 4.85
77 78 1.401905 CTATTCGTTTTGGAGGCTGGC 59.598 52.381 0.00 0.00 0.00 4.85
78 79 0.251341 ATTCGTTTTGGAGGCTGGCT 60.251 50.000 2.24 2.24 0.00 4.75
79 80 1.172180 TTCGTTTTGGAGGCTGGCTG 61.172 55.000 9.06 0.00 0.00 4.85
80 81 1.898574 CGTTTTGGAGGCTGGCTGT 60.899 57.895 9.06 0.00 0.00 4.40
81 82 1.662044 GTTTTGGAGGCTGGCTGTG 59.338 57.895 9.06 0.00 0.00 3.66
82 83 1.109323 GTTTTGGAGGCTGGCTGTGT 61.109 55.000 9.06 0.00 0.00 3.72
83 84 0.396974 TTTTGGAGGCTGGCTGTGTT 60.397 50.000 9.06 0.00 0.00 3.32
84 85 1.108727 TTTGGAGGCTGGCTGTGTTG 61.109 55.000 9.06 0.00 0.00 3.33
85 86 3.368571 GGAGGCTGGCTGTGTTGC 61.369 66.667 9.06 0.00 0.00 4.17
112 113 2.896854 GCTGATGCCGGCGATGAA 60.897 61.111 23.90 3.26 34.60 2.57
113 114 3.017323 CTGATGCCGGCGATGAAC 58.983 61.111 23.90 9.49 0.00 3.18
114 115 2.874694 CTGATGCCGGCGATGAACG 61.875 63.158 23.90 1.98 45.66 3.95
115 116 2.890474 GATGCCGGCGATGAACGT 60.890 61.111 23.90 0.00 44.60 3.99
116 117 3.155470 GATGCCGGCGATGAACGTG 62.155 63.158 23.90 0.00 44.60 4.49
117 118 3.950794 ATGCCGGCGATGAACGTGT 62.951 57.895 23.90 0.00 44.60 4.49
118 119 2.507547 GCCGGCGATGAACGTGTA 60.508 61.111 12.58 0.00 44.60 2.90
119 120 2.514013 GCCGGCGATGAACGTGTAG 61.514 63.158 12.58 0.00 44.60 2.74
120 121 1.138036 CCGGCGATGAACGTGTAGA 59.862 57.895 9.30 0.00 44.60 2.59
121 122 1.138047 CCGGCGATGAACGTGTAGAC 61.138 60.000 9.30 0.00 44.60 2.59
122 123 1.138047 CGGCGATGAACGTGTAGACC 61.138 60.000 0.00 0.00 44.60 3.85
123 124 1.138047 GGCGATGAACGTGTAGACCG 61.138 60.000 0.00 0.00 44.60 4.79
124 125 1.740043 GCGATGAACGTGTAGACCGC 61.740 60.000 0.00 0.00 44.60 5.68
125 126 0.179171 CGATGAACGTGTAGACCGCT 60.179 55.000 0.00 0.00 37.22 5.52
126 127 1.269166 GATGAACGTGTAGACCGCTG 58.731 55.000 0.00 0.00 0.00 5.18
127 128 0.108804 ATGAACGTGTAGACCGCTGG 60.109 55.000 0.00 0.00 0.00 4.85
128 129 2.048503 AACGTGTAGACCGCTGGC 60.049 61.111 0.00 0.00 0.00 4.85
129 130 2.488087 GAACGTGTAGACCGCTGGCT 62.488 60.000 0.00 0.00 0.00 4.75
130 131 2.202623 CGTGTAGACCGCTGGCTC 60.203 66.667 0.00 0.00 0.00 4.70
131 132 2.701780 CGTGTAGACCGCTGGCTCT 61.702 63.158 0.00 0.00 0.00 4.09
132 133 1.153745 GTGTAGACCGCTGGCTCTG 60.154 63.158 0.00 0.00 0.00 3.35
133 134 1.606601 TGTAGACCGCTGGCTCTGT 60.607 57.895 0.00 0.00 0.00 3.41
134 135 1.185618 TGTAGACCGCTGGCTCTGTT 61.186 55.000 0.00 0.00 0.00 3.16
135 136 0.737715 GTAGACCGCTGGCTCTGTTG 60.738 60.000 0.00 0.00 0.00 3.33
136 137 2.507110 TAGACCGCTGGCTCTGTTGC 62.507 60.000 0.00 0.00 0.00 4.17
143 144 3.818787 GGCTCTGTTGCCGGCATG 61.819 66.667 33.25 22.76 43.74 4.06
144 145 2.747460 GCTCTGTTGCCGGCATGA 60.747 61.111 33.25 25.51 0.00 3.07
145 146 2.117156 GCTCTGTTGCCGGCATGAT 61.117 57.895 33.25 0.00 0.00 2.45
146 147 1.725665 CTCTGTTGCCGGCATGATG 59.274 57.895 33.25 20.16 0.00 3.07
147 148 0.745486 CTCTGTTGCCGGCATGATGA 60.745 55.000 33.25 23.07 0.00 2.92
148 149 0.322366 TCTGTTGCCGGCATGATGAA 60.322 50.000 33.25 11.89 0.00 2.57
149 150 0.179156 CTGTTGCCGGCATGATGAAC 60.179 55.000 33.25 24.37 0.00 3.18
150 151 0.608856 TGTTGCCGGCATGATGAACT 60.609 50.000 33.25 0.00 0.00 3.01
151 152 0.179156 GTTGCCGGCATGATGAACTG 60.179 55.000 33.25 0.00 0.00 3.16
152 153 1.314534 TTGCCGGCATGATGAACTGG 61.315 55.000 33.25 0.00 0.00 4.00
153 154 2.484062 GCCGGCATGATGAACTGGG 61.484 63.158 24.80 0.00 0.00 4.45
154 155 2.484062 CCGGCATGATGAACTGGGC 61.484 63.158 0.00 0.00 0.00 5.36
155 156 2.484062 CGGCATGATGAACTGGGCC 61.484 63.158 0.00 0.00 38.04 5.80
156 157 2.484062 GGCATGATGAACTGGGCCG 61.484 63.158 0.00 0.00 0.00 6.13
157 158 3.113745 CATGATGAACTGGGCCGC 58.886 61.111 0.00 0.00 0.00 6.53
158 159 1.452651 CATGATGAACTGGGCCGCT 60.453 57.895 0.00 0.00 0.00 5.52
159 160 1.452651 ATGATGAACTGGGCCGCTG 60.453 57.895 0.00 0.00 0.00 5.18
160 161 2.825836 GATGAACTGGGCCGCTGG 60.826 66.667 0.00 0.00 0.00 4.85
170 171 3.512516 GCCGCTGGCCTGATGAAC 61.513 66.667 14.77 0.00 44.06 3.18
171 172 2.270205 CCGCTGGCCTGATGAACT 59.730 61.111 14.77 0.00 0.00 3.01
172 173 1.522092 CCGCTGGCCTGATGAACTA 59.478 57.895 14.77 0.00 0.00 2.24
173 174 0.531532 CCGCTGGCCTGATGAACTAG 60.532 60.000 14.77 0.00 0.00 2.57
174 175 0.531532 CGCTGGCCTGATGAACTAGG 60.532 60.000 14.77 0.00 37.14 3.02
175 176 0.179034 GCTGGCCTGATGAACTAGGG 60.179 60.000 14.77 0.00 34.58 3.53
179 180 1.673168 GCCTGATGAACTAGGGCTTG 58.327 55.000 0.00 0.00 39.68 4.01
180 181 1.748591 GCCTGATGAACTAGGGCTTGG 60.749 57.143 0.00 0.00 39.68 3.61
181 182 1.673168 CTGATGAACTAGGGCTTGGC 58.327 55.000 0.00 0.00 0.00 4.52
182 183 0.991146 TGATGAACTAGGGCTTGGCA 59.009 50.000 0.00 0.00 0.00 4.92
183 184 1.565759 TGATGAACTAGGGCTTGGCAT 59.434 47.619 0.00 0.00 0.00 4.40
184 185 2.025037 TGATGAACTAGGGCTTGGCATT 60.025 45.455 0.00 0.00 0.00 3.56
185 186 2.603075 TGAACTAGGGCTTGGCATTT 57.397 45.000 0.00 0.00 0.00 2.32
186 187 3.730215 TGAACTAGGGCTTGGCATTTA 57.270 42.857 0.00 0.00 0.00 1.40
187 188 4.040936 TGAACTAGGGCTTGGCATTTAA 57.959 40.909 0.00 0.00 0.00 1.52
188 189 4.411927 TGAACTAGGGCTTGGCATTTAAA 58.588 39.130 0.00 0.00 0.00 1.52
189 190 4.835615 TGAACTAGGGCTTGGCATTTAAAA 59.164 37.500 0.00 0.00 0.00 1.52
190 191 5.047377 TGAACTAGGGCTTGGCATTTAAAAG 60.047 40.000 0.00 0.00 0.00 2.27
191 192 4.416516 ACTAGGGCTTGGCATTTAAAAGT 58.583 39.130 0.00 0.00 0.00 2.66
192 193 4.838423 ACTAGGGCTTGGCATTTAAAAGTT 59.162 37.500 0.00 0.00 0.00 2.66
193 194 4.006780 AGGGCTTGGCATTTAAAAGTTG 57.993 40.909 0.00 0.00 0.00 3.16
194 195 3.390967 AGGGCTTGGCATTTAAAAGTTGT 59.609 39.130 0.00 0.00 0.00 3.32
195 196 4.133820 GGGCTTGGCATTTAAAAGTTGTT 58.866 39.130 0.00 0.00 0.00 2.83
196 197 4.213270 GGGCTTGGCATTTAAAAGTTGTTC 59.787 41.667 0.00 0.00 0.00 3.18
197 198 4.213270 GGCTTGGCATTTAAAAGTTGTTCC 59.787 41.667 0.00 0.00 0.00 3.62
198 199 5.056480 GCTTGGCATTTAAAAGTTGTTCCT 58.944 37.500 0.00 0.00 0.00 3.36
199 200 5.527214 GCTTGGCATTTAAAAGTTGTTCCTT 59.473 36.000 0.00 0.00 0.00 3.36
200 201 6.038161 GCTTGGCATTTAAAAGTTGTTCCTTT 59.962 34.615 0.00 0.00 36.23 3.11
201 202 7.415095 GCTTGGCATTTAAAAGTTGTTCCTTTT 60.415 33.333 0.00 4.54 44.55 2.27
202 203 7.929941 TGGCATTTAAAAGTTGTTCCTTTTT 57.070 28.000 4.44 0.00 40.78 1.94
223 224 7.989416 TTTTTAAAATAGACACGGACAGGAT 57.011 32.000 0.55 0.00 0.00 3.24
224 225 6.978343 TTTAAAATAGACACGGACAGGATG 57.022 37.500 0.00 0.00 46.00 3.51
225 226 3.543680 AAATAGACACGGACAGGATGG 57.456 47.619 0.00 0.00 43.62 3.51
226 227 1.414158 ATAGACACGGACAGGATGGG 58.586 55.000 0.00 0.00 43.62 4.00
227 228 0.686441 TAGACACGGACAGGATGGGG 60.686 60.000 0.00 0.00 43.62 4.96
228 229 3.682292 GACACGGACAGGATGGGGC 62.682 68.421 0.00 0.00 43.62 5.80
229 230 3.716195 CACGGACAGGATGGGGCA 61.716 66.667 0.00 0.00 43.62 5.36
230 231 3.717294 ACGGACAGGATGGGGCAC 61.717 66.667 0.00 0.00 43.62 5.01
231 232 4.838152 CGGACAGGATGGGGCACG 62.838 72.222 0.00 0.00 43.62 5.34
254 255 4.082523 CAGGGCACGTCCGGACAT 62.083 66.667 32.80 17.77 34.94 3.06
255 256 4.082523 AGGGCACGTCCGGACATG 62.083 66.667 32.80 29.42 34.94 3.21
256 257 4.077184 GGGCACGTCCGGACATGA 62.077 66.667 33.27 0.00 34.94 3.07
257 258 2.813908 GGCACGTCCGGACATGAC 60.814 66.667 33.27 28.30 0.00 3.06
258 259 2.813908 GCACGTCCGGACATGACC 60.814 66.667 33.27 13.51 0.00 4.02
259 260 2.125673 CACGTCCGGACATGACCC 60.126 66.667 32.80 5.61 0.00 4.46
260 261 3.387947 ACGTCCGGACATGACCCC 61.388 66.667 32.80 4.81 0.00 4.95
261 262 3.387091 CGTCCGGACATGACCCCA 61.387 66.667 32.80 0.00 0.00 4.96
262 263 2.731571 CGTCCGGACATGACCCCAT 61.732 63.158 32.80 0.00 0.00 4.00
263 264 1.607612 GTCCGGACATGACCCCATT 59.392 57.895 29.75 0.00 0.00 3.16
264 265 0.748005 GTCCGGACATGACCCCATTG 60.748 60.000 29.75 0.00 0.00 2.82
265 266 2.120909 CCGGACATGACCCCATTGC 61.121 63.158 8.69 0.00 0.00 3.56
266 267 2.120909 CGGACATGACCCCATTGCC 61.121 63.158 8.69 0.00 0.00 4.52
267 268 1.758122 GGACATGACCCCATTGCCC 60.758 63.158 0.00 0.00 0.00 5.36
268 269 1.307647 GACATGACCCCATTGCCCT 59.692 57.895 0.00 0.00 0.00 5.19
269 270 0.550914 GACATGACCCCATTGCCCTA 59.449 55.000 0.00 0.00 0.00 3.53
270 271 1.145738 GACATGACCCCATTGCCCTAT 59.854 52.381 0.00 0.00 0.00 2.57
271 272 1.145738 ACATGACCCCATTGCCCTATC 59.854 52.381 0.00 0.00 0.00 2.08
272 273 0.779997 ATGACCCCATTGCCCTATCC 59.220 55.000 0.00 0.00 0.00 2.59
273 274 0.625980 TGACCCCATTGCCCTATCCA 60.626 55.000 0.00 0.00 0.00 3.41
274 275 0.555769 GACCCCATTGCCCTATCCAA 59.444 55.000 0.00 0.00 0.00 3.53
275 276 1.014804 ACCCCATTGCCCTATCCAAA 58.985 50.000 0.00 0.00 0.00 3.28
276 277 1.342975 ACCCCATTGCCCTATCCAAAC 60.343 52.381 0.00 0.00 0.00 2.93
277 278 1.032014 CCCATTGCCCTATCCAAACG 58.968 55.000 0.00 0.00 0.00 3.60
278 279 1.032014 CCATTGCCCTATCCAAACGG 58.968 55.000 0.00 0.00 0.00 4.44
279 280 1.409521 CCATTGCCCTATCCAAACGGA 60.410 52.381 0.00 0.00 36.85 4.69
280 281 1.676006 CATTGCCCTATCCAAACGGAC 59.324 52.381 0.00 0.00 34.62 4.79
281 282 0.693622 TTGCCCTATCCAAACGGACA 59.306 50.000 0.00 0.00 34.62 4.02
282 283 0.251916 TGCCCTATCCAAACGGACAG 59.748 55.000 0.00 0.00 34.62 3.51
283 284 0.539986 GCCCTATCCAAACGGACAGA 59.460 55.000 0.00 0.00 34.62 3.41
284 285 1.065709 GCCCTATCCAAACGGACAGAA 60.066 52.381 0.00 0.00 34.62 3.02
285 286 2.421529 GCCCTATCCAAACGGACAGAAT 60.422 50.000 0.00 0.00 34.62 2.40
286 287 3.467803 CCCTATCCAAACGGACAGAATC 58.532 50.000 0.00 0.00 34.62 2.52
287 288 3.467803 CCTATCCAAACGGACAGAATCC 58.532 50.000 0.00 0.00 45.20 3.01
314 315 3.838468 GACGTCCGTTTGAGGTCG 58.162 61.111 3.51 1.55 45.71 4.79
315 316 2.355481 ACGTCCGTTTGAGGTCGC 60.355 61.111 2.89 0.00 44.45 5.19
316 317 2.355363 CGTCCGTTTGAGGTCGCA 60.355 61.111 0.00 0.00 36.21 5.10
317 318 1.736645 CGTCCGTTTGAGGTCGCAT 60.737 57.895 0.00 0.00 36.21 4.73
318 319 1.787847 GTCCGTTTGAGGTCGCATG 59.212 57.895 0.00 0.00 0.00 4.06
319 320 1.375396 TCCGTTTGAGGTCGCATGG 60.375 57.895 0.00 0.00 0.00 3.66
320 321 1.671054 CCGTTTGAGGTCGCATGGT 60.671 57.895 0.00 0.00 0.00 3.55
321 322 1.497278 CGTTTGAGGTCGCATGGTG 59.503 57.895 0.00 0.00 0.00 4.17
322 323 1.875963 GTTTGAGGTCGCATGGTGG 59.124 57.895 0.00 0.00 0.00 4.61
323 324 0.605319 GTTTGAGGTCGCATGGTGGA 60.605 55.000 0.00 0.00 0.00 4.02
324 325 0.321564 TTTGAGGTCGCATGGTGGAG 60.322 55.000 0.00 0.00 0.00 3.86
325 326 1.480212 TTGAGGTCGCATGGTGGAGT 61.480 55.000 0.00 0.00 0.00 3.85
326 327 1.296715 GAGGTCGCATGGTGGAGTT 59.703 57.895 0.00 0.00 0.00 3.01
327 328 1.003355 AGGTCGCATGGTGGAGTTG 60.003 57.895 0.00 0.00 0.00 3.16
328 329 2.040544 GGTCGCATGGTGGAGTTGG 61.041 63.158 0.00 0.00 0.00 3.77
329 330 2.359850 TCGCATGGTGGAGTTGGC 60.360 61.111 0.00 0.00 0.00 4.52
330 331 3.443045 CGCATGGTGGAGTTGGCC 61.443 66.667 0.00 0.00 0.00 5.36
420 421 2.386661 ATTAACTCGGTCAGCTGTGG 57.613 50.000 14.67 4.35 0.00 4.17
426 427 1.080230 CGGTCAGCTGTGGAGACTG 60.080 63.158 14.67 5.23 32.98 3.51
427 428 1.294780 GGTCAGCTGTGGAGACTGG 59.705 63.158 14.67 0.00 32.98 4.00
483 490 4.767255 CCTCTGTGTGGGGCTCGC 62.767 72.222 0.00 0.00 0.00 5.03
500 507 1.301165 GCTTTTGGTTGGCTGGCTG 60.301 57.895 2.00 0.00 0.00 4.85
501 508 1.368579 CTTTTGGTTGGCTGGCTGG 59.631 57.895 2.00 0.00 0.00 4.85
709 2594 5.869753 ATCCATCAGAGTTTCTTGTTTCG 57.130 39.130 0.00 0.00 0.00 3.46
710 2595 4.065088 TCCATCAGAGTTTCTTGTTTCGG 58.935 43.478 0.00 0.00 0.00 4.30
711 2596 4.065088 CCATCAGAGTTTCTTGTTTCGGA 58.935 43.478 0.00 0.00 0.00 4.55
712 2597 4.515191 CCATCAGAGTTTCTTGTTTCGGAA 59.485 41.667 0.00 0.00 0.00 4.30
816 2702 0.680921 CGGGGAACAAGACATGGCAT 60.681 55.000 0.00 0.00 0.00 4.40
849 2759 8.738645 AATTCTATCATCAGTTCTAACCAACC 57.261 34.615 0.00 0.00 0.00 3.77
850 2760 7.496346 TTCTATCATCAGTTCTAACCAACCT 57.504 36.000 0.00 0.00 0.00 3.50
851 2761 6.878317 TCTATCATCAGTTCTAACCAACCTG 58.122 40.000 0.00 0.00 0.00 4.00
852 2762 4.286297 TCATCAGTTCTAACCAACCTGG 57.714 45.455 0.00 0.00 45.02 4.45
853 2763 2.561478 TCAGTTCTAACCAACCTGGC 57.439 50.000 0.00 0.00 42.67 4.85
854 2764 1.771854 TCAGTTCTAACCAACCTGGCA 59.228 47.619 0.00 0.00 42.67 4.92
855 2765 2.375174 TCAGTTCTAACCAACCTGGCAT 59.625 45.455 0.00 0.00 42.67 4.40
856 2766 2.489329 CAGTTCTAACCAACCTGGCATG 59.511 50.000 0.00 0.00 42.67 4.06
857 2767 1.818674 GTTCTAACCAACCTGGCATGG 59.181 52.381 15.50 15.50 42.67 3.66
858 2768 0.331278 TCTAACCAACCTGGCATGGG 59.669 55.000 19.76 7.78 42.67 4.00
859 2769 0.039618 CTAACCAACCTGGCATGGGT 59.960 55.000 19.76 16.81 42.67 4.51
887 2797 2.202932 ATCGCCATGGACGTCAGC 60.203 61.111 18.40 12.88 0.00 4.26
985 2900 1.200760 ATATAGGCCCGCCATGCAGA 61.201 55.000 8.74 0.00 38.92 4.26
986 2901 1.414866 TATAGGCCCGCCATGCAGAA 61.415 55.000 8.74 0.00 38.92 3.02
988 2903 2.963928 TAGGCCCGCCATGCAGAATG 62.964 60.000 8.74 0.00 38.92 2.67
1008 2923 3.544684 TGCACATACATCCAATCAGTCC 58.455 45.455 0.00 0.00 0.00 3.85
1011 2926 1.794701 CATACATCCAATCAGTCCGCG 59.205 52.381 0.00 0.00 0.00 6.46
1035 2950 3.368220 CCTCAAGACAGACACATCAGAGG 60.368 52.174 0.00 0.00 34.88 3.69
1036 2951 2.028658 TCAAGACAGACACATCAGAGGC 60.029 50.000 0.00 0.00 0.00 4.70
1037 2952 1.935799 AGACAGACACATCAGAGGCT 58.064 50.000 0.00 0.00 0.00 4.58
1038 2953 1.824230 AGACAGACACATCAGAGGCTC 59.176 52.381 6.34 6.34 0.00 4.70
1039 2954 1.547820 GACAGACACATCAGAGGCTCA 59.452 52.381 18.26 0.00 0.00 4.26
1040 2955 1.549620 ACAGACACATCAGAGGCTCAG 59.450 52.381 18.26 9.22 0.00 3.35
1041 2956 1.823610 CAGACACATCAGAGGCTCAGA 59.176 52.381 18.26 15.17 0.00 3.27
1042 2957 2.101783 AGACACATCAGAGGCTCAGAG 58.898 52.381 18.26 10.44 0.00 3.35
1147 3063 1.745141 GCTCCACTACATTCTGGGCAG 60.745 57.143 0.00 0.00 0.00 4.85
1637 3559 2.507992 CGGAGCCTGTTCGAGCTG 60.508 66.667 1.10 0.00 40.11 4.24
1643 3565 1.079543 CCTGTTCGAGCTGTCCCTG 60.080 63.158 0.00 0.00 0.00 4.45
2032 3960 1.305381 CGGTGAGTCCCTCCCTCTT 60.305 63.158 0.00 0.00 0.00 2.85
2033 3961 0.905337 CGGTGAGTCCCTCCCTCTTT 60.905 60.000 0.00 0.00 0.00 2.52
2036 3964 2.537143 GTGAGTCCCTCCCTCTTTACA 58.463 52.381 0.00 0.00 0.00 2.41
2037 3965 2.234168 GTGAGTCCCTCCCTCTTTACAC 59.766 54.545 0.00 0.00 0.00 2.90
2038 3966 2.111972 TGAGTCCCTCCCTCTTTACACT 59.888 50.000 0.00 0.00 0.00 3.55
2039 3967 3.174779 GAGTCCCTCCCTCTTTACACTT 58.825 50.000 0.00 0.00 0.00 3.16
2067 4734 3.390135 TGCTTCTCACAAAACCGAGTAG 58.610 45.455 0.00 0.00 31.79 2.57
2070 4737 4.272748 GCTTCTCACAAAACCGAGTAGTTT 59.727 41.667 0.00 0.00 41.67 2.66
2071 4738 5.728351 TTCTCACAAAACCGAGTAGTTTG 57.272 39.130 0.00 0.00 39.83 2.93
2073 4740 5.607477 TCTCACAAAACCGAGTAGTTTGAT 58.393 37.500 2.61 0.00 39.83 2.57
2124 4791 5.505324 GCAATTTGGCATCATCTCAGTAGAC 60.505 44.000 0.00 0.00 33.57 2.59
2127 4794 4.597404 TGGCATCATCTCAGTAGACATC 57.403 45.455 0.00 0.00 33.57 3.06
2128 4795 4.221530 TGGCATCATCTCAGTAGACATCT 58.778 43.478 0.00 0.00 33.57 2.90
2129 4796 4.280425 TGGCATCATCTCAGTAGACATCTC 59.720 45.833 0.00 0.00 33.57 2.75
2144 4829 5.462405 AGACATCTCACTCGTTTAAGTCAC 58.538 41.667 0.00 0.00 0.00 3.67
2198 4883 5.465724 GTGTTAGTCCAGTACTCCACTTTTG 59.534 44.000 8.26 0.00 39.80 2.44
2199 4884 5.364446 TGTTAGTCCAGTACTCCACTTTTGA 59.636 40.000 8.26 0.00 39.80 2.69
2200 4885 6.042781 TGTTAGTCCAGTACTCCACTTTTGAT 59.957 38.462 8.26 0.00 39.80 2.57
2248 4937 3.695060 AGATAGTGGTCACTCAACGTAGG 59.305 47.826 6.91 0.00 42.54 3.18
2249 4938 1.991121 AGTGGTCACTCAACGTAGGA 58.009 50.000 0.00 0.00 36.92 2.94
2250 4939 1.887198 AGTGGTCACTCAACGTAGGAG 59.113 52.381 13.82 13.82 36.92 3.69
2251 4940 1.067776 GTGGTCACTCAACGTAGGAGG 60.068 57.143 18.14 9.51 36.70 4.30
2252 4941 1.254954 GGTCACTCAACGTAGGAGGT 58.745 55.000 18.14 4.87 36.70 3.85
2253 4942 2.224843 TGGTCACTCAACGTAGGAGGTA 60.225 50.000 18.14 6.04 36.70 3.08
2254 4943 2.422832 GGTCACTCAACGTAGGAGGTAG 59.577 54.545 18.14 9.79 36.70 3.18
2255 4944 2.422832 GTCACTCAACGTAGGAGGTAGG 59.577 54.545 18.14 7.64 36.70 3.18
2256 4945 2.040813 TCACTCAACGTAGGAGGTAGGT 59.959 50.000 18.14 0.00 36.70 3.08
2257 4946 3.264193 TCACTCAACGTAGGAGGTAGGTA 59.736 47.826 18.14 0.00 36.70 3.08
2258 4947 3.626670 CACTCAACGTAGGAGGTAGGTAG 59.373 52.174 18.14 0.00 36.70 3.18
2259 4948 3.212685 CTCAACGTAGGAGGTAGGTAGG 58.787 54.545 8.82 0.00 0.00 3.18
2260 4949 2.846206 TCAACGTAGGAGGTAGGTAGGA 59.154 50.000 0.00 0.00 0.00 2.94
2261 4950 2.948315 CAACGTAGGAGGTAGGTAGGAC 59.052 54.545 0.00 0.00 0.00 3.85
2262 4951 2.200081 ACGTAGGAGGTAGGTAGGACA 58.800 52.381 0.00 0.00 0.00 4.02
2263 4952 2.578021 ACGTAGGAGGTAGGTAGGACAA 59.422 50.000 0.00 0.00 0.00 3.18
2264 4953 3.212685 CGTAGGAGGTAGGTAGGACAAG 58.787 54.545 0.00 0.00 0.00 3.16
2265 4954 2.850695 AGGAGGTAGGTAGGACAAGG 57.149 55.000 0.00 0.00 0.00 3.61
2266 4955 1.121378 GGAGGTAGGTAGGACAAGGC 58.879 60.000 0.00 0.00 0.00 4.35
2267 4956 1.621622 GGAGGTAGGTAGGACAAGGCA 60.622 57.143 0.00 0.00 0.00 4.75
2268 4957 1.481363 GAGGTAGGTAGGACAAGGCAC 59.519 57.143 0.00 0.00 0.00 5.01
2270 4959 1.207329 GGTAGGTAGGACAAGGCACTG 59.793 57.143 0.00 0.00 40.86 3.66
2271 4960 1.207329 GTAGGTAGGACAAGGCACTGG 59.793 57.143 0.00 0.00 40.86 4.00
2272 4961 1.377333 GGTAGGACAAGGCACTGGC 60.377 63.158 0.00 0.00 40.86 4.85
2273 4962 1.374947 GTAGGACAAGGCACTGGCA 59.625 57.895 5.25 0.00 40.86 4.92
2274 4963 0.250727 GTAGGACAAGGCACTGGCAA 60.251 55.000 5.25 0.00 40.86 4.52
2275 4964 0.036732 TAGGACAAGGCACTGGCAAG 59.963 55.000 5.25 0.00 40.86 4.01
2330 5019 2.765689 TCCCACTTCCCACATGTTTT 57.234 45.000 0.00 0.00 0.00 2.43
2333 5022 4.085733 TCCCACTTCCCACATGTTTTATG 58.914 43.478 0.00 0.00 0.00 1.90
2365 5059 0.673956 GGCCTTTTCCCACTCTCGAC 60.674 60.000 0.00 0.00 0.00 4.20
2377 5072 4.477780 CCACTCTCGACTACTTGAAGTTC 58.522 47.826 1.97 0.00 0.00 3.01
2423 5187 8.364142 AGGATCTGTGCAGTATTCTACTAAATC 58.636 37.037 0.00 0.00 37.23 2.17
2466 5231 1.560923 ATCTCGAGCGTTCGGAATTG 58.439 50.000 21.60 7.37 46.67 2.32
2475 5240 2.095213 GCGTTCGGAATTGAAGCATGTA 59.905 45.455 0.00 0.00 0.00 2.29
2476 5241 3.242739 GCGTTCGGAATTGAAGCATGTAT 60.243 43.478 0.00 0.00 0.00 2.29
2477 5242 4.518217 CGTTCGGAATTGAAGCATGTATC 58.482 43.478 0.00 0.00 0.00 2.24
2480 5245 2.224079 CGGAATTGAAGCATGTATCCCG 59.776 50.000 0.00 0.00 0.00 5.14
2518 5284 1.070134 ACTTTAGTTGCTGCGAGGTGA 59.930 47.619 0.00 0.00 0.00 4.02
2522 5288 1.160329 AGTTGCTGCGAGGTGACAAC 61.160 55.000 0.00 0.00 40.65 3.32
2558 5324 5.420739 ACACATAACAACTTTGTCCCAGTTT 59.579 36.000 0.00 0.00 41.31 2.66
2610 5376 6.134061 GTCAACCTCGCTTTAACTAAAGTTG 58.866 40.000 5.62 7.61 43.43 3.16
2611 5377 4.744136 ACCTCGCTTTAACTAAAGTTGC 57.256 40.909 5.62 0.23 43.43 4.17
2612 5378 3.501062 ACCTCGCTTTAACTAAAGTTGCC 59.499 43.478 5.62 0.00 43.43 4.52
2615 5381 5.041951 TCGCTTTAACTAAAGTTGCCATG 57.958 39.130 5.62 0.00 43.43 3.66
2616 5382 4.757657 TCGCTTTAACTAAAGTTGCCATGA 59.242 37.500 5.62 0.00 43.43 3.07
2617 5383 5.239744 TCGCTTTAACTAAAGTTGCCATGAA 59.760 36.000 5.62 0.00 43.43 2.57
2618 5384 5.918011 CGCTTTAACTAAAGTTGCCATGAAA 59.082 36.000 5.62 0.00 43.43 2.69
2619 5385 6.419413 CGCTTTAACTAAAGTTGCCATGAAAA 59.581 34.615 5.62 0.00 43.43 2.29
2620 5386 7.358352 CGCTTTAACTAAAGTTGCCATGAAAAG 60.358 37.037 5.62 6.63 43.43 2.27
2621 5387 7.095649 GCTTTAACTAAAGTTGCCATGAAAAGG 60.096 37.037 5.62 0.00 43.43 3.11
2622 5388 4.871933 ACTAAAGTTGCCATGAAAAGGG 57.128 40.909 0.00 0.00 0.00 3.95
2623 5389 4.223144 ACTAAAGTTGCCATGAAAAGGGT 58.777 39.130 0.00 0.00 0.00 4.34
2624 5390 4.653801 ACTAAAGTTGCCATGAAAAGGGTT 59.346 37.500 0.00 0.00 0.00 4.11
2625 5391 3.751479 AAGTTGCCATGAAAAGGGTTC 57.249 42.857 0.00 0.00 0.00 3.62
2626 5392 1.613437 AGTTGCCATGAAAAGGGTTCG 59.387 47.619 0.00 0.00 0.00 3.95
2627 5393 1.611491 GTTGCCATGAAAAGGGTTCGA 59.389 47.619 0.00 0.00 0.00 3.71
2628 5394 1.988293 TGCCATGAAAAGGGTTCGAA 58.012 45.000 0.00 0.00 0.00 3.71
2629 5395 2.524306 TGCCATGAAAAGGGTTCGAAT 58.476 42.857 0.00 0.00 0.00 3.34
2630 5396 2.896685 TGCCATGAAAAGGGTTCGAATT 59.103 40.909 0.00 0.00 0.00 2.17
2631 5397 4.082845 TGCCATGAAAAGGGTTCGAATTA 58.917 39.130 0.00 0.00 0.00 1.40
2632 5398 4.709397 TGCCATGAAAAGGGTTCGAATTAT 59.291 37.500 0.00 0.00 0.00 1.28
2633 5399 5.888724 TGCCATGAAAAGGGTTCGAATTATA 59.111 36.000 0.00 0.00 0.00 0.98
2638 5404 9.062524 CATGAAAAGGGTTCGAATTATACCATA 57.937 33.333 0.00 0.00 33.51 2.74
3301 6093 1.307647 GGGATCACCATGCCCAAGT 59.692 57.895 0.00 0.00 41.64 3.16
3474 6350 3.833061 CGAATAAACTTGTTGCGACTTCG 59.167 43.478 5.50 6.80 43.27 3.79
3498 6374 5.539955 GGACCATAATAACCTTGCCATCATT 59.460 40.000 0.00 0.00 0.00 2.57
3500 6376 7.054491 ACCATAATAACCTTGCCATCATTTC 57.946 36.000 0.00 0.00 0.00 2.17
3506 6382 4.730949 ACCTTGCCATCATTTCTGATTG 57.269 40.909 0.00 0.00 40.20 2.67
3507 6383 4.346730 ACCTTGCCATCATTTCTGATTGA 58.653 39.130 0.00 0.00 40.20 2.57
3566 6444 6.349300 TGATTATCCTTAGAGCAACTCCAAC 58.651 40.000 0.00 0.00 0.00 3.77
3576 6455 1.885850 AACTCCAACGCACGACACC 60.886 57.895 0.00 0.00 0.00 4.16
3587 6466 1.736645 ACGACACCTTTGATCCGCG 60.737 57.895 0.00 0.00 0.00 6.46
3592 6471 2.025156 CCTTTGATCCGCGCATGC 59.975 61.111 7.91 7.91 37.91 4.06
3642 6521 4.742438 GACGCAAAGTCCAAATCACTTA 57.258 40.909 0.00 0.00 43.95 2.24
3643 6522 5.296813 GACGCAAAGTCCAAATCACTTAT 57.703 39.130 0.00 0.00 43.95 1.73
3688 6567 5.685520 TTTTCAGCCCAAACTTACCTTTT 57.314 34.783 0.00 0.00 0.00 2.27
3698 6577 6.478673 CCCAAACTTACCTTTTGATTTGTGTC 59.521 38.462 0.00 0.00 36.24 3.67
3703 6582 8.514330 ACTTACCTTTTGATTTGTGTCTACAA 57.486 30.769 0.00 0.00 44.66 2.41
3704 6583 8.621286 ACTTACCTTTTGATTTGTGTCTACAAG 58.379 33.333 0.00 0.00 46.63 3.16
3705 6584 6.391227 ACCTTTTGATTTGTGTCTACAAGG 57.609 37.500 0.00 0.00 46.63 3.61
3727 6606 1.202973 GACATGAGATGGACGCGTCG 61.203 60.000 30.99 17.66 33.60 5.12
3770 6649 2.637025 GCACGCGTGTTGGTCAAT 59.363 55.556 36.80 0.00 0.00 2.57
3814 6693 1.228552 AACGGCAGCCACTGGAATT 60.229 52.632 13.30 0.00 31.21 2.17
3889 6768 4.104738 TCACCCATTTCTCCTTTCTCACTT 59.895 41.667 0.00 0.00 0.00 3.16
3895 6774 4.608948 TTCTCCTTTCTCACTTCAGTCC 57.391 45.455 0.00 0.00 0.00 3.85
3907 6786 2.909006 ACTTCAGTCCACATCTGACCAT 59.091 45.455 0.00 0.00 40.90 3.55
3919 6798 0.606401 CTGACCATGCGTGTTCCCTT 60.606 55.000 4.96 0.00 0.00 3.95
3921 6800 1.586154 GACCATGCGTGTTCCCTTGG 61.586 60.000 4.96 0.00 33.74 3.61
3952 6831 1.575419 AACCCTAGTCCGCCAACATA 58.425 50.000 0.00 0.00 0.00 2.29
3997 6876 0.672401 GCAAGCATGGCAAGCACAAT 60.672 50.000 17.75 0.00 32.79 2.71
4047 6931 0.033601 AACTTCACCTTGGCACCACA 60.034 50.000 0.00 0.00 0.00 4.17
4052 6936 1.176527 CACCTTGGCACCACAATAGG 58.823 55.000 3.96 3.96 0.00 2.57
4055 6939 0.684153 CTTGGCACCACAATAGGGGG 60.684 60.000 0.00 0.00 30.71 5.40
4068 6952 1.532894 TAGGGGGAGGGGACATCACA 61.533 60.000 0.00 0.00 0.00 3.58
4075 6966 3.127533 GGGACATCACAGCCACGC 61.128 66.667 0.00 0.00 0.00 5.34
4126 7017 0.613012 GGTACCACTGGGAGTACCGT 60.613 60.000 7.15 0.00 46.60 4.83
4136 7027 2.599578 AGTACCGTGTCCCGCTGT 60.600 61.111 0.00 0.00 34.38 4.40
4150 7041 4.657824 CTGTCGTGGCCGGACGTT 62.658 66.667 18.56 0.00 40.34 3.99
4165 7056 1.454653 GACGTTAACCTCTTGCACGAC 59.545 52.381 0.00 0.00 34.90 4.34
4218 7109 3.120385 CGTGCCGCAATCTGAGCA 61.120 61.111 0.00 0.00 0.00 4.26
4287 7178 2.954868 GCCGTGATCCAGCGTACG 60.955 66.667 11.84 11.84 36.39 3.67
4315 7206 3.515502 CACTCCTTGAACTGGGATGTCTA 59.484 47.826 0.00 0.00 0.00 2.59
4329 7220 0.803117 TGTCTAGTTCGCGACTGAGG 59.197 55.000 9.15 5.28 39.48 3.86
4339 7230 1.212751 CGACTGAGGATGACGTGCA 59.787 57.895 0.00 0.00 0.00 4.57
4371 7262 4.329545 GACGCTTGCCCTCCACCA 62.330 66.667 0.00 0.00 0.00 4.17
4375 7266 2.282462 CTTGCCCTCCACCACCAC 60.282 66.667 0.00 0.00 0.00 4.16
4376 7267 2.776526 TTGCCCTCCACCACCACT 60.777 61.111 0.00 0.00 0.00 4.00
4398 7289 2.507944 GCGGTGAGGCATCAGGAT 59.492 61.111 0.00 0.00 35.66 3.24
4413 7306 0.831288 AGGATGAGGATGAGGAGGCG 60.831 60.000 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.532794 AGCCGGCCACCAAAATGAA 60.533 52.632 26.15 0.00 0.00 2.57
1 2 2.117206 AGCCGGCCACCAAAATGA 59.883 55.556 26.15 0.00 0.00 2.57
2 3 2.262292 CAGCCGGCCACCAAAATG 59.738 61.111 26.15 8.46 0.00 2.32
3 4 2.203625 ACAGCCGGCCACCAAAAT 60.204 55.556 26.15 0.00 0.00 1.82
4 5 3.222855 CACAGCCGGCCACCAAAA 61.223 61.111 26.15 0.00 0.00 2.44
5 6 4.514585 ACACAGCCGGCCACCAAA 62.515 61.111 26.15 0.00 0.00 3.28
6 7 4.514585 AACACAGCCGGCCACCAA 62.515 61.111 26.15 0.00 0.00 3.67
26 27 4.688419 CAACACAGCAAGCGGCCG 62.688 66.667 24.05 24.05 46.50 6.13
29 30 4.688419 CGGCAACACAGCAAGCGG 62.688 66.667 0.00 0.00 35.83 5.52
30 31 4.688419 CCGGCAACACAGCAAGCG 62.688 66.667 0.00 0.00 35.83 4.68
32 33 4.688419 CGCCGGCAACACAGCAAG 62.688 66.667 28.98 0.98 35.83 4.01
36 37 4.680237 TCCTCGCCGGCAACACAG 62.680 66.667 28.98 12.94 0.00 3.66
37 38 4.980805 GTCCTCGCCGGCAACACA 62.981 66.667 28.98 2.06 0.00 3.72
38 39 4.980805 TGTCCTCGCCGGCAACAC 62.981 66.667 28.98 16.94 0.00 3.32
39 40 4.243008 TTGTCCTCGCCGGCAACA 62.243 61.111 28.98 20.72 0.00 3.33
40 41 2.775032 TAGTTGTCCTCGCCGGCAAC 62.775 60.000 28.98 21.22 43.78 4.17
41 42 1.895020 ATAGTTGTCCTCGCCGGCAA 61.895 55.000 28.98 7.25 0.00 4.52
42 43 1.895020 AATAGTTGTCCTCGCCGGCA 61.895 55.000 28.98 12.94 0.00 5.69
43 44 1.152383 GAATAGTTGTCCTCGCCGGC 61.152 60.000 19.07 19.07 0.00 6.13
44 45 0.870307 CGAATAGTTGTCCTCGCCGG 60.870 60.000 0.00 0.00 0.00 6.13
45 46 0.179145 ACGAATAGTTGTCCTCGCCG 60.179 55.000 0.00 0.00 34.70 6.46
46 47 2.005971 AACGAATAGTTGTCCTCGCC 57.994 50.000 0.00 0.00 42.39 5.54
47 48 3.424433 CCAAAACGAATAGTTGTCCTCGC 60.424 47.826 0.00 0.00 43.37 5.03
48 49 3.991773 TCCAAAACGAATAGTTGTCCTCG 59.008 43.478 0.00 0.00 43.37 4.63
49 50 4.392138 CCTCCAAAACGAATAGTTGTCCTC 59.608 45.833 0.00 0.00 43.37 3.71
50 51 4.324267 CCTCCAAAACGAATAGTTGTCCT 58.676 43.478 0.00 0.00 43.37 3.85
51 52 3.119955 GCCTCCAAAACGAATAGTTGTCC 60.120 47.826 0.00 0.00 43.37 4.02
52 53 3.751698 AGCCTCCAAAACGAATAGTTGTC 59.248 43.478 0.00 0.00 43.37 3.18
53 54 3.502211 CAGCCTCCAAAACGAATAGTTGT 59.498 43.478 0.00 0.00 43.37 3.32
54 55 3.119849 CCAGCCTCCAAAACGAATAGTTG 60.120 47.826 0.00 0.00 43.37 3.16
55 56 3.081804 CCAGCCTCCAAAACGAATAGTT 58.918 45.455 0.00 0.00 46.76 2.24
56 57 2.711542 CCAGCCTCCAAAACGAATAGT 58.288 47.619 0.00 0.00 0.00 2.12
57 58 1.401905 GCCAGCCTCCAAAACGAATAG 59.598 52.381 0.00 0.00 0.00 1.73
58 59 1.004277 AGCCAGCCTCCAAAACGAATA 59.996 47.619 0.00 0.00 0.00 1.75
59 60 0.251341 AGCCAGCCTCCAAAACGAAT 60.251 50.000 0.00 0.00 0.00 3.34
60 61 1.150536 AGCCAGCCTCCAAAACGAA 59.849 52.632 0.00 0.00 0.00 3.85
61 62 1.600636 CAGCCAGCCTCCAAAACGA 60.601 57.895 0.00 0.00 0.00 3.85
62 63 1.898574 ACAGCCAGCCTCCAAAACG 60.899 57.895 0.00 0.00 0.00 3.60
63 64 1.109323 ACACAGCCAGCCTCCAAAAC 61.109 55.000 0.00 0.00 0.00 2.43
64 65 0.396974 AACACAGCCAGCCTCCAAAA 60.397 50.000 0.00 0.00 0.00 2.44
65 66 1.108727 CAACACAGCCAGCCTCCAAA 61.109 55.000 0.00 0.00 0.00 3.28
66 67 1.529010 CAACACAGCCAGCCTCCAA 60.529 57.895 0.00 0.00 0.00 3.53
67 68 2.113774 CAACACAGCCAGCCTCCA 59.886 61.111 0.00 0.00 0.00 3.86
68 69 3.368571 GCAACACAGCCAGCCTCC 61.369 66.667 0.00 0.00 0.00 4.30
95 96 2.896854 TTCATCGCCGGCATCAGC 60.897 61.111 28.98 0.00 41.10 4.26
96 97 2.874694 CGTTCATCGCCGGCATCAG 61.875 63.158 28.98 13.11 0.00 2.90
97 98 2.889988 CGTTCATCGCCGGCATCA 60.890 61.111 28.98 10.08 0.00 3.07
98 99 2.890474 ACGTTCATCGCCGGCATC 60.890 61.111 28.98 4.79 44.19 3.91
99 100 2.566057 TACACGTTCATCGCCGGCAT 62.566 55.000 28.98 16.24 44.19 4.40
100 101 3.284133 TACACGTTCATCGCCGGCA 62.284 57.895 28.98 14.46 44.19 5.69
101 102 2.507547 TACACGTTCATCGCCGGC 60.508 61.111 19.07 19.07 44.19 6.13
102 103 1.138036 TCTACACGTTCATCGCCGG 59.862 57.895 0.00 0.00 44.19 6.13
103 104 1.138047 GGTCTACACGTTCATCGCCG 61.138 60.000 0.00 0.00 44.19 6.46
104 105 1.138047 CGGTCTACACGTTCATCGCC 61.138 60.000 0.00 0.00 44.19 5.54
105 106 1.740043 GCGGTCTACACGTTCATCGC 61.740 60.000 0.00 0.00 44.19 4.58
106 107 0.179171 AGCGGTCTACACGTTCATCG 60.179 55.000 0.00 0.00 46.00 3.84
107 108 1.269166 CAGCGGTCTACACGTTCATC 58.731 55.000 0.00 0.00 0.00 2.92
108 109 0.108804 CCAGCGGTCTACACGTTCAT 60.109 55.000 0.00 0.00 0.00 2.57
109 110 1.287815 CCAGCGGTCTACACGTTCA 59.712 57.895 0.00 0.00 0.00 3.18
110 111 2.092882 GCCAGCGGTCTACACGTTC 61.093 63.158 0.00 0.00 0.00 3.95
111 112 2.048503 GCCAGCGGTCTACACGTT 60.049 61.111 0.00 0.00 0.00 3.99
112 113 2.989824 AGCCAGCGGTCTACACGT 60.990 61.111 0.00 0.00 0.00 4.49
113 114 2.202623 GAGCCAGCGGTCTACACG 60.203 66.667 0.00 0.00 33.54 4.49
114 115 1.153745 CAGAGCCAGCGGTCTACAC 60.154 63.158 0.00 0.00 45.07 2.90
115 116 1.185618 AACAGAGCCAGCGGTCTACA 61.186 55.000 0.00 0.00 45.07 2.74
116 117 0.737715 CAACAGAGCCAGCGGTCTAC 60.738 60.000 0.00 0.00 45.07 2.59
117 118 1.591703 CAACAGAGCCAGCGGTCTA 59.408 57.895 0.00 0.00 45.07 2.59
119 120 3.426568 GCAACAGAGCCAGCGGTC 61.427 66.667 0.00 0.00 36.73 4.79
127 128 2.117156 ATCATGCCGGCAACAGAGC 61.117 57.895 36.33 0.00 0.00 4.09
128 129 0.745486 TCATCATGCCGGCAACAGAG 60.745 55.000 36.33 21.77 0.00 3.35
129 130 0.322366 TTCATCATGCCGGCAACAGA 60.322 50.000 36.33 29.72 0.00 3.41
130 131 0.179156 GTTCATCATGCCGGCAACAG 60.179 55.000 36.33 25.52 0.00 3.16
131 132 0.608856 AGTTCATCATGCCGGCAACA 60.609 50.000 36.33 23.50 0.00 3.33
132 133 0.179156 CAGTTCATCATGCCGGCAAC 60.179 55.000 36.33 25.52 0.00 4.17
133 134 1.314534 CCAGTTCATCATGCCGGCAA 61.315 55.000 36.33 19.92 0.00 4.52
134 135 1.750018 CCAGTTCATCATGCCGGCA 60.750 57.895 34.80 34.80 0.00 5.69
135 136 2.484062 CCCAGTTCATCATGCCGGC 61.484 63.158 22.73 22.73 0.00 6.13
136 137 2.484062 GCCCAGTTCATCATGCCGG 61.484 63.158 0.00 0.00 0.00 6.13
137 138 2.484062 GGCCCAGTTCATCATGCCG 61.484 63.158 0.00 0.00 0.00 5.69
138 139 2.484062 CGGCCCAGTTCATCATGCC 61.484 63.158 0.00 0.00 35.55 4.40
139 140 3.113745 CGGCCCAGTTCATCATGC 58.886 61.111 0.00 0.00 0.00 4.06
140 141 1.452651 AGCGGCCCAGTTCATCATG 60.453 57.895 0.00 0.00 0.00 3.07
141 142 1.452651 CAGCGGCCCAGTTCATCAT 60.453 57.895 0.00 0.00 0.00 2.45
142 143 2.046023 CAGCGGCCCAGTTCATCA 60.046 61.111 0.00 0.00 0.00 3.07
143 144 2.825836 CCAGCGGCCCAGTTCATC 60.826 66.667 0.00 0.00 0.00 2.92
154 155 0.531532 CTAGTTCATCAGGCCAGCGG 60.532 60.000 5.01 0.00 0.00 5.52
155 156 0.531532 CCTAGTTCATCAGGCCAGCG 60.532 60.000 5.01 0.00 0.00 5.18
156 157 0.179034 CCCTAGTTCATCAGGCCAGC 60.179 60.000 5.01 0.00 0.00 4.85
157 158 0.179034 GCCCTAGTTCATCAGGCCAG 60.179 60.000 5.01 0.00 37.66 4.85
158 159 0.621571 AGCCCTAGTTCATCAGGCCA 60.622 55.000 5.01 0.00 45.00 5.36
159 160 0.548510 AAGCCCTAGTTCATCAGGCC 59.451 55.000 0.00 0.00 45.00 5.19
160 161 1.673168 CAAGCCCTAGTTCATCAGGC 58.327 55.000 0.00 0.00 44.20 4.85
161 162 1.748591 GCCAAGCCCTAGTTCATCAGG 60.749 57.143 0.00 0.00 0.00 3.86
162 163 1.065199 TGCCAAGCCCTAGTTCATCAG 60.065 52.381 0.00 0.00 0.00 2.90
163 164 0.991146 TGCCAAGCCCTAGTTCATCA 59.009 50.000 0.00 0.00 0.00 3.07
164 165 2.355010 ATGCCAAGCCCTAGTTCATC 57.645 50.000 0.00 0.00 0.00 2.92
165 166 2.834638 AATGCCAAGCCCTAGTTCAT 57.165 45.000 0.00 0.00 0.00 2.57
166 167 2.603075 AAATGCCAAGCCCTAGTTCA 57.397 45.000 0.00 0.00 0.00 3.18
167 168 5.047306 ACTTTTAAATGCCAAGCCCTAGTTC 60.047 40.000 1.19 0.00 0.00 3.01
168 169 4.838423 ACTTTTAAATGCCAAGCCCTAGTT 59.162 37.500 1.19 0.00 0.00 2.24
169 170 4.416516 ACTTTTAAATGCCAAGCCCTAGT 58.583 39.130 1.19 0.00 0.00 2.57
170 171 5.170748 CAACTTTTAAATGCCAAGCCCTAG 58.829 41.667 1.19 0.00 0.00 3.02
171 172 4.591072 ACAACTTTTAAATGCCAAGCCCTA 59.409 37.500 1.19 0.00 0.00 3.53
172 173 3.390967 ACAACTTTTAAATGCCAAGCCCT 59.609 39.130 1.19 0.00 0.00 5.19
173 174 3.738982 ACAACTTTTAAATGCCAAGCCC 58.261 40.909 1.19 0.00 0.00 5.19
174 175 4.213270 GGAACAACTTTTAAATGCCAAGCC 59.787 41.667 1.19 0.00 0.00 4.35
175 176 5.056480 AGGAACAACTTTTAAATGCCAAGC 58.944 37.500 1.19 0.00 0.00 4.01
176 177 7.552458 AAAGGAACAACTTTTAAATGCCAAG 57.448 32.000 1.19 0.00 37.39 3.61
177 178 7.929941 AAAAGGAACAACTTTTAAATGCCAA 57.070 28.000 2.39 0.00 45.88 4.52
178 179 7.929941 AAAAAGGAACAACTTTTAAATGCCA 57.070 28.000 4.57 0.00 46.73 4.92
199 200 7.094549 CCATCCTGTCCGTGTCTATTTTAAAAA 60.095 37.037 4.44 0.00 0.00 1.94
200 201 6.373216 CCATCCTGTCCGTGTCTATTTTAAAA 59.627 38.462 2.51 2.51 0.00 1.52
201 202 5.878116 CCATCCTGTCCGTGTCTATTTTAAA 59.122 40.000 0.00 0.00 0.00 1.52
202 203 5.424757 CCATCCTGTCCGTGTCTATTTTAA 58.575 41.667 0.00 0.00 0.00 1.52
203 204 4.141801 CCCATCCTGTCCGTGTCTATTTTA 60.142 45.833 0.00 0.00 0.00 1.52
204 205 3.370527 CCCATCCTGTCCGTGTCTATTTT 60.371 47.826 0.00 0.00 0.00 1.82
205 206 2.170607 CCCATCCTGTCCGTGTCTATTT 59.829 50.000 0.00 0.00 0.00 1.40
206 207 1.762957 CCCATCCTGTCCGTGTCTATT 59.237 52.381 0.00 0.00 0.00 1.73
207 208 1.414158 CCCATCCTGTCCGTGTCTAT 58.586 55.000 0.00 0.00 0.00 1.98
208 209 0.686441 CCCCATCCTGTCCGTGTCTA 60.686 60.000 0.00 0.00 0.00 2.59
209 210 1.990060 CCCCATCCTGTCCGTGTCT 60.990 63.158 0.00 0.00 0.00 3.41
210 211 2.584608 CCCCATCCTGTCCGTGTC 59.415 66.667 0.00 0.00 0.00 3.67
211 212 3.717294 GCCCCATCCTGTCCGTGT 61.717 66.667 0.00 0.00 0.00 4.49
212 213 3.716195 TGCCCCATCCTGTCCGTG 61.716 66.667 0.00 0.00 0.00 4.94
213 214 3.717294 GTGCCCCATCCTGTCCGT 61.717 66.667 0.00 0.00 0.00 4.69
214 215 4.838152 CGTGCCCCATCCTGTCCG 62.838 72.222 0.00 0.00 0.00 4.79
216 217 3.704231 ATGCGTGCCCCATCCTGTC 62.704 63.158 0.00 0.00 0.00 3.51
217 218 3.704231 GATGCGTGCCCCATCCTGT 62.704 63.158 0.00 0.00 34.43 4.00
218 219 2.903855 GATGCGTGCCCCATCCTG 60.904 66.667 0.00 0.00 34.43 3.86
219 220 4.552365 CGATGCGTGCCCCATCCT 62.552 66.667 0.00 0.00 36.58 3.24
237 238 4.082523 ATGTCCGGACGTGCCCTG 62.083 66.667 28.38 0.00 0.00 4.45
238 239 4.082523 CATGTCCGGACGTGCCCT 62.083 66.667 36.83 12.79 40.88 5.19
239 240 4.077184 TCATGTCCGGACGTGCCC 62.077 66.667 40.27 15.48 45.44 5.36
240 241 2.813908 GTCATGTCCGGACGTGCC 60.814 66.667 40.27 31.69 45.44 5.01
241 242 2.813908 GGTCATGTCCGGACGTGC 60.814 66.667 40.27 33.81 45.44 5.34
242 243 2.125673 GGGTCATGTCCGGACGTG 60.126 66.667 39.73 39.73 46.78 4.49
243 244 3.387947 GGGGTCATGTCCGGACGT 61.388 66.667 28.70 26.41 36.12 4.34
244 245 2.252072 AATGGGGTCATGTCCGGACG 62.252 60.000 28.70 16.15 36.12 4.79
245 246 0.748005 CAATGGGGTCATGTCCGGAC 60.748 60.000 28.17 28.17 33.18 4.79
246 247 1.607071 CAATGGGGTCATGTCCGGA 59.393 57.895 0.00 0.00 33.18 5.14
247 248 2.120909 GCAATGGGGTCATGTCCGG 61.121 63.158 0.00 0.00 33.18 5.14
248 249 2.120909 GGCAATGGGGTCATGTCCG 61.121 63.158 2.78 0.00 33.18 4.79
249 250 1.758122 GGGCAATGGGGTCATGTCC 60.758 63.158 0.00 0.00 33.18 4.02
250 251 0.550914 TAGGGCAATGGGGTCATGTC 59.449 55.000 0.00 0.00 33.18 3.06
251 252 1.145738 GATAGGGCAATGGGGTCATGT 59.854 52.381 0.00 0.00 33.18 3.21
252 253 1.548582 GGATAGGGCAATGGGGTCATG 60.549 57.143 0.00 0.00 33.18 3.07
253 254 0.779997 GGATAGGGCAATGGGGTCAT 59.220 55.000 0.00 0.00 34.56 3.06
254 255 0.625980 TGGATAGGGCAATGGGGTCA 60.626 55.000 0.00 0.00 0.00 4.02
255 256 0.555769 TTGGATAGGGCAATGGGGTC 59.444 55.000 0.00 0.00 0.00 4.46
256 257 1.014804 TTTGGATAGGGCAATGGGGT 58.985 50.000 0.00 0.00 0.00 4.95
257 258 1.413118 GTTTGGATAGGGCAATGGGG 58.587 55.000 0.00 0.00 0.00 4.96
258 259 1.032014 CGTTTGGATAGGGCAATGGG 58.968 55.000 0.00 0.00 0.00 4.00
259 260 1.032014 CCGTTTGGATAGGGCAATGG 58.968 55.000 0.00 0.00 37.49 3.16
260 261 2.051334 TCCGTTTGGATAGGGCAATG 57.949 50.000 0.00 0.00 40.17 2.82
296 297 1.731969 CGACCTCAAACGGACGTCC 60.732 63.158 25.28 25.28 37.43 4.79
297 298 2.370393 GCGACCTCAAACGGACGTC 61.370 63.158 7.13 7.13 42.68 4.34
298 299 2.355481 GCGACCTCAAACGGACGT 60.355 61.111 0.00 0.00 42.68 4.34
299 300 1.736645 ATGCGACCTCAAACGGACG 60.737 57.895 0.00 0.00 43.37 4.79
300 301 1.635663 CCATGCGACCTCAAACGGAC 61.636 60.000 0.00 0.00 32.29 4.79
301 302 1.375396 CCATGCGACCTCAAACGGA 60.375 57.895 0.00 0.00 0.00 4.69
302 303 1.671054 ACCATGCGACCTCAAACGG 60.671 57.895 0.00 0.00 0.00 4.44
303 304 1.497278 CACCATGCGACCTCAAACG 59.503 57.895 0.00 0.00 0.00 3.60
304 305 0.605319 TCCACCATGCGACCTCAAAC 60.605 55.000 0.00 0.00 0.00 2.93
305 306 0.321564 CTCCACCATGCGACCTCAAA 60.322 55.000 0.00 0.00 0.00 2.69
306 307 1.296392 CTCCACCATGCGACCTCAA 59.704 57.895 0.00 0.00 0.00 3.02
307 308 1.480212 AACTCCACCATGCGACCTCA 61.480 55.000 0.00 0.00 0.00 3.86
308 309 1.021390 CAACTCCACCATGCGACCTC 61.021 60.000 0.00 0.00 0.00 3.85
309 310 1.003355 CAACTCCACCATGCGACCT 60.003 57.895 0.00 0.00 0.00 3.85
310 311 2.040544 CCAACTCCACCATGCGACC 61.041 63.158 0.00 0.00 0.00 4.79
311 312 2.690778 GCCAACTCCACCATGCGAC 61.691 63.158 0.00 0.00 0.00 5.19
312 313 2.359850 GCCAACTCCACCATGCGA 60.360 61.111 0.00 0.00 0.00 5.10
313 314 2.535485 TAGGCCAACTCCACCATGCG 62.535 60.000 5.01 0.00 0.00 4.73
314 315 0.323360 TTAGGCCAACTCCACCATGC 60.323 55.000 5.01 0.00 0.00 4.06
315 316 1.004745 ACTTAGGCCAACTCCACCATG 59.995 52.381 5.01 0.00 0.00 3.66
316 317 1.282157 GACTTAGGCCAACTCCACCAT 59.718 52.381 5.01 0.00 0.00 3.55
317 318 0.690762 GACTTAGGCCAACTCCACCA 59.309 55.000 5.01 0.00 0.00 4.17
318 319 0.984995 AGACTTAGGCCAACTCCACC 59.015 55.000 5.01 0.00 0.00 4.61
319 320 1.066071 GGAGACTTAGGCCAACTCCAC 60.066 57.143 20.62 3.69 44.31 4.02
320 321 1.276622 GGAGACTTAGGCCAACTCCA 58.723 55.000 20.62 0.00 44.31 3.86
321 322 0.542333 GGGAGACTTAGGCCAACTCC 59.458 60.000 18.66 18.66 44.21 3.85
322 323 0.175989 CGGGAGACTTAGGCCAACTC 59.824 60.000 5.01 5.84 0.00 3.01
323 324 0.252103 TCGGGAGACTTAGGCCAACT 60.252 55.000 5.01 0.00 0.00 3.16
324 325 2.283824 TCGGGAGACTTAGGCCAAC 58.716 57.895 5.01 0.00 0.00 3.77
325 326 4.878987 TCGGGAGACTTAGGCCAA 57.121 55.556 5.01 0.00 0.00 4.52
426 427 1.414550 GGGACTCAATCTCTGGCTACC 59.585 57.143 0.00 0.00 0.00 3.18
427 428 2.111384 TGGGACTCAATCTCTGGCTAC 58.889 52.381 0.00 0.00 0.00 3.58
483 490 1.368579 CCAGCCAGCCAACCAAAAG 59.631 57.895 0.00 0.00 0.00 2.27
500 507 1.578206 GGACAGCTTTTCTCGTGCCC 61.578 60.000 0.00 0.00 0.00 5.36
501 508 0.884704 TGGACAGCTTTTCTCGTGCC 60.885 55.000 0.00 0.00 0.00 5.01
505 512 1.129998 CTGCATGGACAGCTTTTCTCG 59.870 52.381 0.00 0.00 0.00 4.04
542 553 9.784531 ATCACTTCCCATCTGTAATTGTATAAG 57.215 33.333 0.00 0.00 0.00 1.73
709 2594 0.036306 TGCGACCTTTCCTTCCTTCC 59.964 55.000 0.00 0.00 0.00 3.46
710 2595 1.807142 CTTGCGACCTTTCCTTCCTTC 59.193 52.381 0.00 0.00 0.00 3.46
711 2596 1.420138 TCTTGCGACCTTTCCTTCCTT 59.580 47.619 0.00 0.00 0.00 3.36
712 2597 1.056660 TCTTGCGACCTTTCCTTCCT 58.943 50.000 0.00 0.00 0.00 3.36
816 2702 8.985315 AGAACTGATGATAGAATTATTTGGCA 57.015 30.769 0.00 0.00 0.00 4.92
830 2740 4.848357 CCAGGTTGGTTAGAACTGATGAT 58.152 43.478 0.00 0.00 31.35 2.45
844 2754 3.384532 GCACCCATGCCAGGTTGG 61.385 66.667 4.01 4.01 46.97 3.77
853 2763 1.942657 CGATGGAGTTTAGCACCCATG 59.057 52.381 0.00 0.00 36.87 3.66
854 2764 1.747206 GCGATGGAGTTTAGCACCCAT 60.747 52.381 0.00 0.00 38.48 4.00
855 2765 0.392461 GCGATGGAGTTTAGCACCCA 60.392 55.000 0.00 0.00 32.21 4.51
856 2766 1.095807 GGCGATGGAGTTTAGCACCC 61.096 60.000 0.00 0.00 0.00 4.61
857 2767 0.392461 TGGCGATGGAGTTTAGCACC 60.392 55.000 0.00 0.00 0.00 5.01
858 2768 1.331756 CATGGCGATGGAGTTTAGCAC 59.668 52.381 0.00 0.00 0.00 4.40
859 2769 1.667236 CATGGCGATGGAGTTTAGCA 58.333 50.000 0.00 0.00 0.00 3.49
887 2797 1.881973 AGCTGCATAAATACGCCATGG 59.118 47.619 7.63 7.63 0.00 3.66
985 2900 4.581824 GGACTGATTGGATGTATGTGCATT 59.418 41.667 0.00 0.00 0.00 3.56
986 2901 4.139786 GGACTGATTGGATGTATGTGCAT 58.860 43.478 0.00 0.00 0.00 3.96
988 2903 2.545526 CGGACTGATTGGATGTATGTGC 59.454 50.000 0.00 0.00 0.00 4.57
989 2904 2.545526 GCGGACTGATTGGATGTATGTG 59.454 50.000 0.00 0.00 0.00 3.21
1008 2923 1.004277 GTGTCTGTCTTGAGGTCGCG 61.004 60.000 0.00 0.00 0.00 5.87
1011 2926 3.256879 TCTGATGTGTCTGTCTTGAGGTC 59.743 47.826 0.00 0.00 0.00 3.85
1035 2950 2.211806 GAAGTGATGGATGCTCTGAGC 58.788 52.381 22.38 22.38 42.82 4.26
1036 2951 2.485124 GGGAAGTGATGGATGCTCTGAG 60.485 54.545 0.00 0.00 0.00 3.35
1037 2952 1.487976 GGGAAGTGATGGATGCTCTGA 59.512 52.381 0.00 0.00 0.00 3.27
1038 2953 1.476471 GGGGAAGTGATGGATGCTCTG 60.476 57.143 0.00 0.00 0.00 3.35
1039 2954 0.842635 GGGGAAGTGATGGATGCTCT 59.157 55.000 0.00 0.00 0.00 4.09
1040 2955 0.548031 TGGGGAAGTGATGGATGCTC 59.452 55.000 0.00 0.00 0.00 4.26
1041 2956 0.257039 GTGGGGAAGTGATGGATGCT 59.743 55.000 0.00 0.00 0.00 3.79
1042 2957 0.034186 TGTGGGGAAGTGATGGATGC 60.034 55.000 0.00 0.00 0.00 3.91
1103 3019 0.333312 AGAGGAAGGCGAAGGAGAGA 59.667 55.000 0.00 0.00 0.00 3.10
1147 3063 0.172803 CTTGCTGCCATTGCTCTTCC 59.827 55.000 0.00 0.00 38.71 3.46
1643 3565 1.520342 GGTCTCCATGAGCACGCTC 60.520 63.158 12.17 12.17 42.34 5.03
1922 3850 0.897621 TCATGCTCTTCTTCTCGCCA 59.102 50.000 0.00 0.00 0.00 5.69
2067 4734 9.185192 CCTTAATGAAGAAACTGACAATCAAAC 57.815 33.333 0.00 0.00 34.25 2.93
2070 4737 7.719193 TGTCCTTAATGAAGAAACTGACAATCA 59.281 33.333 0.00 0.00 34.25 2.57
2071 4738 8.099364 TGTCCTTAATGAAGAAACTGACAATC 57.901 34.615 0.00 0.00 34.25 2.67
2073 4740 8.352201 CAATGTCCTTAATGAAGAAACTGACAA 58.648 33.333 3.74 0.00 34.57 3.18
2116 4783 6.430308 ACTTAAACGAGTGAGATGTCTACTGA 59.570 38.462 0.00 0.00 0.00 3.41
2117 4784 6.613233 ACTTAAACGAGTGAGATGTCTACTG 58.387 40.000 0.00 0.00 0.00 2.74
2124 4791 4.556233 TGGTGACTTAAACGAGTGAGATG 58.444 43.478 0.00 0.00 0.00 2.90
2127 4794 4.238761 TCTGGTGACTTAAACGAGTGAG 57.761 45.455 0.00 0.00 0.00 3.51
2128 4795 4.866508 ATCTGGTGACTTAAACGAGTGA 57.133 40.909 0.00 0.00 0.00 3.41
2129 4796 4.563184 GCTATCTGGTGACTTAAACGAGTG 59.437 45.833 0.00 0.00 0.00 3.51
2144 4829 2.271800 GGTCGAGTTGTTGCTATCTGG 58.728 52.381 0.00 0.00 0.00 3.86
2248 4937 1.481363 GTGCCTTGTCCTACCTACCTC 59.519 57.143 0.00 0.00 0.00 3.85
2249 4938 1.078989 AGTGCCTTGTCCTACCTACCT 59.921 52.381 0.00 0.00 0.00 3.08
2250 4939 1.207329 CAGTGCCTTGTCCTACCTACC 59.793 57.143 0.00 0.00 0.00 3.18
2251 4940 1.207329 CCAGTGCCTTGTCCTACCTAC 59.793 57.143 0.00 0.00 0.00 3.18
2252 4941 1.568504 CCAGTGCCTTGTCCTACCTA 58.431 55.000 0.00 0.00 0.00 3.08
2253 4942 1.842381 GCCAGTGCCTTGTCCTACCT 61.842 60.000 0.00 0.00 0.00 3.08
2254 4943 1.377333 GCCAGTGCCTTGTCCTACC 60.377 63.158 0.00 0.00 0.00 3.18
2255 4944 0.250727 TTGCCAGTGCCTTGTCCTAC 60.251 55.000 0.00 0.00 36.33 3.18
2256 4945 0.036732 CTTGCCAGTGCCTTGTCCTA 59.963 55.000 0.00 0.00 36.33 2.94
2257 4946 1.228367 CTTGCCAGTGCCTTGTCCT 60.228 57.895 0.00 0.00 36.33 3.85
2258 4947 2.270986 CCTTGCCAGTGCCTTGTCC 61.271 63.158 0.00 0.00 36.33 4.02
2259 4948 2.924105 GCCTTGCCAGTGCCTTGTC 61.924 63.158 0.00 0.00 36.33 3.18
2260 4949 2.914097 GCCTTGCCAGTGCCTTGT 60.914 61.111 0.00 0.00 36.33 3.16
2261 4950 4.047059 CGCCTTGCCAGTGCCTTG 62.047 66.667 0.00 0.00 36.33 3.61
2262 4951 4.269523 TCGCCTTGCCAGTGCCTT 62.270 61.111 0.00 0.00 36.33 4.35
2263 4952 4.711949 CTCGCCTTGCCAGTGCCT 62.712 66.667 0.00 0.00 36.33 4.75
2264 4953 3.605749 TACTCGCCTTGCCAGTGCC 62.606 63.158 0.00 0.00 36.33 5.01
2265 4954 1.671054 TTACTCGCCTTGCCAGTGC 60.671 57.895 0.00 0.00 38.26 4.40
2266 4955 0.602638 TGTTACTCGCCTTGCCAGTG 60.603 55.000 0.00 0.00 0.00 3.66
2267 4956 0.602905 GTGTTACTCGCCTTGCCAGT 60.603 55.000 0.00 0.00 0.00 4.00
2268 4957 1.626654 CGTGTTACTCGCCTTGCCAG 61.627 60.000 0.00 0.00 0.00 4.85
2269 4958 1.666553 CGTGTTACTCGCCTTGCCA 60.667 57.895 0.00 0.00 0.00 4.92
2270 4959 2.388232 CCGTGTTACTCGCCTTGCC 61.388 63.158 0.98 0.00 0.00 4.52
2271 4960 3.023591 GCCGTGTTACTCGCCTTGC 62.024 63.158 0.98 0.00 0.00 4.01
2272 4961 2.388232 GGCCGTGTTACTCGCCTTG 61.388 63.158 0.98 0.00 0.00 3.61
2273 4962 2.047560 GGCCGTGTTACTCGCCTT 60.048 61.111 0.98 0.00 0.00 4.35
2274 4963 2.656069 ATGGCCGTGTTACTCGCCT 61.656 57.895 16.28 5.03 0.00 5.52
2275 4964 2.125269 ATGGCCGTGTTACTCGCC 60.125 61.111 0.00 11.26 0.00 5.54
2330 5019 7.340999 GGGAAAAGGCCAAAATTACTAGACATA 59.659 37.037 5.01 0.00 0.00 2.29
2333 5022 5.479027 TGGGAAAAGGCCAAAATTACTAGAC 59.521 40.000 5.01 0.00 0.00 2.59
2365 5059 4.799564 AGAGAGCCTGAACTTCAAGTAG 57.200 45.455 0.00 0.00 0.00 2.57
2454 5219 1.135689 ACATGCTTCAATTCCGAACGC 60.136 47.619 0.00 0.00 0.00 4.84
2466 5231 4.900635 AAACATTCGGGATACATGCTTC 57.099 40.909 0.00 0.00 39.74 3.86
2475 5240 4.196193 TGCTATCGAAAAACATTCGGGAT 58.804 39.130 10.29 1.37 41.78 3.85
2476 5241 3.601435 TGCTATCGAAAAACATTCGGGA 58.399 40.909 10.29 0.00 41.78 5.14
2477 5242 4.095610 GTTGCTATCGAAAAACATTCGGG 58.904 43.478 10.29 3.64 41.78 5.14
2480 5245 8.950403 ACTAAAGTTGCTATCGAAAAACATTC 57.050 30.769 0.00 0.00 0.00 2.67
2536 5302 5.420739 ACAAACTGGGACAAAGTTGTTATGT 59.579 36.000 0.00 0.00 42.43 2.29
2540 5306 4.882842 AACAAACTGGGACAAAGTTGTT 57.117 36.364 0.00 0.00 42.43 2.83
2566 5332 4.051237 GACAAACCTGGCAATTTTCTGAC 58.949 43.478 0.00 0.00 0.00 3.51
2581 5347 8.200258 CTTTAGTTAAAGCGAGGTTGACAAACC 61.200 40.741 0.00 0.00 44.18 3.27
2594 5360 5.041951 TCATGGCAACTTTAGTTAAAGCG 57.958 39.130 10.70 4.92 44.92 4.68
2595 5361 7.095649 CCTTTTCATGGCAACTTTAGTTAAAGC 60.096 37.037 10.70 0.00 44.92 3.51
2596 5362 7.384932 CCCTTTTCATGGCAACTTTAGTTAAAG 59.615 37.037 9.50 9.50 46.12 1.85
2597 5363 7.147637 ACCCTTTTCATGGCAACTTTAGTTAAA 60.148 33.333 0.00 0.00 36.32 1.52
2610 5376 3.592898 AATTCGAACCCTTTTCATGGC 57.407 42.857 0.00 0.00 0.00 4.40
2611 5377 6.320164 TGGTATAATTCGAACCCTTTTCATGG 59.680 38.462 0.00 0.00 31.97 3.66
2612 5378 7.328277 TGGTATAATTCGAACCCTTTTCATG 57.672 36.000 0.00 0.00 31.97 3.07
2615 5381 8.672823 AGTATGGTATAATTCGAACCCTTTTC 57.327 34.615 0.00 0.00 31.97 2.29
2633 5399 9.478768 CCCAAACGTTTAAATTTTAAGTATGGT 57.521 29.630 14.20 0.00 0.00 3.55
2652 5418 4.454504 CCCGGAATAGATAAATCCCAAACG 59.545 45.833 0.73 0.00 0.00 3.60
2727 5500 7.114754 TCTGCAGTGAATTATTGGAGAGAATT 58.885 34.615 14.67 0.00 38.29 2.17
3256 6048 0.834261 TCCGTCATGTCCACCTCCAA 60.834 55.000 0.00 0.00 0.00 3.53
3474 6350 4.469657 TGATGGCAAGGTTATTATGGTCC 58.530 43.478 0.00 0.00 0.00 4.46
3498 6374 4.397103 CCTAGCTTGTGCAATCAATCAGAA 59.603 41.667 0.00 0.00 42.74 3.02
3500 6376 3.066342 CCCTAGCTTGTGCAATCAATCAG 59.934 47.826 0.00 0.00 42.74 2.90
3506 6382 2.409948 AGACCCTAGCTTGTGCAATC 57.590 50.000 0.00 0.00 42.74 2.67
3507 6383 2.821969 CAAAGACCCTAGCTTGTGCAAT 59.178 45.455 0.00 0.00 42.74 3.56
3551 6429 1.508632 GTGCGTTGGAGTTGCTCTAA 58.491 50.000 0.00 0.00 0.00 2.10
3555 6433 2.108157 TCGTGCGTTGGAGTTGCT 59.892 55.556 0.00 0.00 0.00 3.91
3566 6444 1.787847 GGATCAAAGGTGTCGTGCG 59.212 57.895 0.00 0.00 0.00 5.34
3576 6455 2.025156 GGCATGCGCGGATCAAAG 59.975 61.111 11.25 0.00 39.92 2.77
3587 6466 1.503542 CGTTTCTGTCCAGGCATGC 59.496 57.895 9.90 9.90 0.00 4.06
3592 6471 2.328099 GCTGGCGTTTCTGTCCAGG 61.328 63.158 9.26 0.00 45.63 4.45
3629 6508 3.485216 CGCCGAACATAAGTGATTTGGAC 60.485 47.826 0.00 0.00 0.00 4.02
3658 6537 1.035923 TTGGGCTGAAAATGCGTTCA 58.964 45.000 0.00 0.00 36.15 3.18
3688 6567 4.346709 TGTCCTCCTTGTAGACACAAATCA 59.653 41.667 0.00 0.00 43.92 2.57
3698 6577 3.963374 TCCATCTCATGTCCTCCTTGTAG 59.037 47.826 0.00 0.00 0.00 2.74
3703 6582 1.407936 CGTCCATCTCATGTCCTCCT 58.592 55.000 0.00 0.00 0.00 3.69
3704 6583 0.249657 GCGTCCATCTCATGTCCTCC 60.250 60.000 0.00 0.00 0.00 4.30
3705 6584 0.596083 CGCGTCCATCTCATGTCCTC 60.596 60.000 0.00 0.00 0.00 3.71
3727 6606 1.336240 GCAGACACCAAAAGGATGTGC 60.336 52.381 0.00 0.00 33.30 4.57
3796 6675 1.228552 AATTCCAGTGGCTGCCGTT 60.229 52.632 14.98 1.00 0.00 4.44
3814 6693 0.179004 AAAAGGACGTGGCATGGACA 60.179 50.000 12.05 0.00 0.00 4.02
3820 6699 3.651803 CCATTTAAAAAGGACGTGGCA 57.348 42.857 0.00 0.00 0.00 4.92
3826 6705 3.428534 CACGCTTGCCATTTAAAAAGGAC 59.571 43.478 12.75 6.09 0.00 3.85
3889 6768 1.065926 GCATGGTCAGATGTGGACTGA 60.066 52.381 0.00 0.00 41.26 3.41
3895 6774 1.129251 GAACACGCATGGTCAGATGTG 59.871 52.381 0.00 0.00 42.67 3.21
3907 6786 2.594303 CTGCCAAGGGAACACGCA 60.594 61.111 0.00 0.00 0.00 5.24
3919 6798 2.904866 GGTTTGTGTCGGCTGCCA 60.905 61.111 20.29 2.90 0.00 4.92
3921 6800 1.298859 CTAGGGTTTGTGTCGGCTGC 61.299 60.000 0.00 0.00 0.00 5.25
3952 6831 1.188219 TGCTGAAGAAGTCCCTCGCT 61.188 55.000 0.00 0.00 0.00 4.93
3955 6834 2.224646 ACCTTTGCTGAAGAAGTCCCTC 60.225 50.000 2.50 0.00 37.57 4.30
3997 6876 0.389817 CGATGAGCCGACCTTTGTGA 60.390 55.000 0.00 0.00 0.00 3.58
4043 6927 1.005556 TCCCCTCCCCCTATTGTGG 59.994 63.158 0.00 0.00 0.00 4.17
4047 6931 0.653397 TGATGTCCCCTCCCCCTATT 59.347 55.000 0.00 0.00 0.00 1.73
4052 6936 3.049080 GCTGTGATGTCCCCTCCCC 62.049 68.421 0.00 0.00 0.00 4.81
4055 6939 1.078143 GTGGCTGTGATGTCCCCTC 60.078 63.158 0.00 0.00 0.00 4.30
4075 6966 3.834799 GGGAGGTACAGCCGGTCG 61.835 72.222 1.90 0.00 43.70 4.79
4136 7027 2.049248 GTTAACGTCCGGCCACGA 60.049 61.111 21.25 3.86 42.69 4.35
4144 7035 0.788391 CGTGCAAGAGGTTAACGTCC 59.212 55.000 21.47 9.64 0.00 4.79
4150 7041 0.320421 GCCAGTCGTGCAAGAGGTTA 60.320 55.000 1.39 0.00 0.00 2.85
4202 7093 2.482374 GTGCTCAGATTGCGGCAC 59.518 61.111 0.05 0.00 45.93 5.01
4287 7178 3.056328 GTTCAAGGAGTGGGGCGC 61.056 66.667 0.00 0.00 0.00 6.53
4315 7206 0.171455 GTCATCCTCAGTCGCGAACT 59.829 55.000 12.06 8.00 39.44 3.01
4339 7230 3.823330 GTCGATCTGGACGGCGGT 61.823 66.667 13.24 0.00 0.00 5.68
4350 7241 2.586357 GGAGGGCAAGCGTCGATC 60.586 66.667 0.00 0.00 0.00 3.69
4359 7250 2.776526 AGTGGTGGTGGAGGGCAA 60.777 61.111 0.00 0.00 0.00 4.52
4375 7266 4.457496 ATGCCTCACCGCCGACAG 62.457 66.667 0.00 0.00 0.00 3.51
4376 7267 4.451150 GATGCCTCACCGCCGACA 62.451 66.667 0.00 0.00 0.00 4.35
4393 7284 0.686224 GCCTCCTCATCCTCATCCTG 59.314 60.000 0.00 0.00 0.00 3.86
4398 7289 0.397675 ATGTCGCCTCCTCATCCTCA 60.398 55.000 0.00 0.00 0.00 3.86
4404 7295 1.860641 TTAGGAATGTCGCCTCCTCA 58.139 50.000 0.00 0.00 41.33 3.86
4413 7306 3.274288 CTCCAGTGCCTTTAGGAATGTC 58.726 50.000 0.00 0.00 37.39 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.