Multiple sequence alignment - TraesCS5D01G406500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G406500 chr5D 100.000 3489 0 0 3357 6845 472239128 472242616 0.000000e+00 6444.0
1 TraesCS5D01G406500 chr5D 100.000 3110 0 0 1 3110 472235772 472238881 0.000000e+00 5744.0
2 TraesCS5D01G406500 chr5D 100.000 2202 0 0 7077 9278 472242848 472245049 0.000000e+00 4067.0
3 TraesCS5D01G406500 chr5D 96.429 140 5 0 4059 4198 483459749 483459888 2.010000e-56 231.0
4 TraesCS5D01G406500 chr5D 95.205 146 6 1 4058 4202 558662083 558662228 7.250000e-56 230.0
5 TraesCS5D01G406500 chr5D 92.500 160 9 3 4039 4197 201236983 201236826 9.370000e-55 226.0
6 TraesCS5D01G406500 chr5D 84.848 99 15 0 4609 4707 266338120 266338022 5.930000e-17 100.0
7 TraesCS5D01G406500 chr5B 94.768 2026 91 9 7262 9277 578547077 578549097 0.000000e+00 3140.0
8 TraesCS5D01G406500 chr5B 90.836 1626 80 33 1468 3067 578540117 578541699 0.000000e+00 2113.0
9 TraesCS5D01G406500 chr5B 93.453 779 45 2 4198 4975 578544977 578545750 0.000000e+00 1151.0
10 TraesCS5D01G406500 chr5B 91.927 768 39 10 5240 5987 578546311 578547075 0.000000e+00 1053.0
11 TraesCS5D01G406500 chr5B 95.895 609 21 4 6240 6845 509461365 509461972 0.000000e+00 983.0
12 TraesCS5D01G406500 chr5B 92.525 602 42 2 3357 3956 578544328 578544928 0.000000e+00 859.0
13 TraesCS5D01G406500 chr5B 83.289 754 49 21 715 1406 578539366 578540104 2.850000e-174 623.0
14 TraesCS5D01G406500 chr5B 89.178 499 25 14 2 494 578538456 578538931 6.200000e-166 595.0
15 TraesCS5D01G406500 chr5B 94.427 323 14 2 5988 6307 468002091 468001770 2.330000e-135 494.0
16 TraesCS5D01G406500 chr5B 94.688 320 10 3 5988 6301 509461145 509461463 3.010000e-134 490.0
17 TraesCS5D01G406500 chr5B 92.963 270 15 3 4974 5242 578545884 578546150 3.140000e-104 390.0
18 TraesCS5D01G406500 chr5B 89.529 191 11 3 7078 7260 38701759 38701948 5.600000e-57 233.0
19 TraesCS5D01G406500 chr5B 89.119 193 13 2 7077 7261 509462012 509462204 5.600000e-57 233.0
20 TraesCS5D01G406500 chr5B 93.590 156 8 2 4059 4213 486829678 486829524 2.010000e-56 231.0
21 TraesCS5D01G406500 chr5B 92.025 163 13 0 7099 7261 411230079 411230241 7.250000e-56 230.0
22 TraesCS5D01G406500 chr5B 93.458 107 7 0 531 637 578538943 578539049 9.640000e-35 159.0
23 TraesCS5D01G406500 chr5B 97.778 45 0 1 3064 3107 578544234 578544278 9.990000e-10 76.8
24 TraesCS5D01G406500 chr5B 96.970 33 0 1 2248 2279 499849775 499849743 5.000000e-03 54.7
25 TraesCS5D01G406500 chr5A 89.655 1595 127 19 7370 8943 591445743 591447320 0.000000e+00 1997.0
26 TraesCS5D01G406500 chr5A 94.132 1210 47 8 1565 2755 591443325 591444529 0.000000e+00 1820.0
27 TraesCS5D01G406500 chr5A 90.219 869 57 8 5988 6845 700785073 700784222 0.000000e+00 1109.0
28 TraesCS5D01G406500 chr5A 85.665 579 34 11 997 1532 591442760 591443332 1.750000e-156 564.0
29 TraesCS5D01G406500 chr5A 84.286 560 77 9 4374 4928 591445186 591445739 3.810000e-148 536.0
30 TraesCS5D01G406500 chr7B 93.852 862 29 17 5988 6845 43563535 43564376 0.000000e+00 1277.0
31 TraesCS5D01G406500 chr7B 94.719 606 30 2 6240 6845 202772385 202772988 0.000000e+00 941.0
32 TraesCS5D01G406500 chr7B 85.379 554 70 9 4198 4748 628461368 628461913 1.750000e-156 564.0
33 TraesCS5D01G406500 chr7B 90.104 192 12 1 7077 7261 56815466 56815275 9.310000e-60 243.0
34 TraesCS5D01G406500 chr7B 90.155 193 10 2 7078 7261 577233665 577233473 9.310000e-60 243.0
35 TraesCS5D01G406500 chr4B 93.155 862 26 23 5988 6845 57802302 57803134 0.000000e+00 1234.0
36 TraesCS5D01G406500 chr4B 92.503 867 26 18 5984 6845 75441217 75440385 0.000000e+00 1205.0
37 TraesCS5D01G406500 chr4B 92.148 866 45 15 5988 6845 599369073 599368223 0.000000e+00 1201.0
38 TraesCS5D01G406500 chr4B 90.104 192 12 3 7077 7261 667485399 667485590 9.310000e-60 243.0
39 TraesCS5D01G406500 chr4B 92.073 164 12 1 7099 7262 619452339 619452177 7.250000e-56 230.0
40 TraesCS5D01G406500 chr4D 91.580 867 45 22 5988 6845 329140657 329141504 0.000000e+00 1171.0
41 TraesCS5D01G406500 chr4D 95.833 144 6 0 4056 4199 297840720 297840863 5.600000e-57 233.0
42 TraesCS5D01G406500 chr4D 88.660 194 13 3 7077 7261 335737050 335736857 2.610000e-55 228.0
43 TraesCS5D01G406500 chr4D 95.714 140 6 0 4061 4200 458248339 458248478 9.370000e-55 226.0
44 TraesCS5D01G406500 chr4D 87.940 199 13 5 7077 7265 448191816 448192013 3.370000e-54 224.0
45 TraesCS5D01G406500 chr4D 93.333 150 9 1 4051 4199 362613184 362613333 4.360000e-53 220.0
46 TraesCS5D01G406500 chr4D 91.720 157 11 2 4059 4213 241368911 241369067 5.640000e-52 217.0
47 TraesCS5D01G406500 chr4D 87.565 193 16 4 7077 7261 266103646 266103454 5.640000e-52 217.0
48 TraesCS5D01G406500 chr4D 86.598 194 17 3 7077 7261 37574364 37574557 1.220000e-48 206.0
49 TraesCS5D01G406500 chr4D 89.571 163 14 3 7099 7260 58633256 58633416 4.390000e-48 204.0
50 TraesCS5D01G406500 chr4D 90.385 156 14 1 7099 7253 310476141 310476296 4.390000e-48 204.0
51 TraesCS5D01G406500 chr4A 91.129 868 54 15 5988 6845 533907667 533906813 0.000000e+00 1155.0
52 TraesCS5D01G406500 chr4A 92.949 156 9 2 4059 4213 323933148 323932994 9.370000e-55 226.0
53 TraesCS5D01G406500 chr4A 92.903 155 9 2 4047 4199 452986228 452986382 3.370000e-54 224.0
54 TraesCS5D01G406500 chr7A 90.899 879 47 19 5977 6845 698746051 698746906 0.000000e+00 1149.0
55 TraesCS5D01G406500 chr7A 89.175 194 12 5 7077 7261 504287073 504286880 5.600000e-57 233.0
56 TraesCS5D01G406500 chr6D 96.296 594 16 5 6252 6845 450350640 450350053 0.000000e+00 970.0
57 TraesCS5D01G406500 chr6D 95.745 141 6 0 4059 4199 73753355 73753215 2.610000e-55 228.0
58 TraesCS5D01G406500 chr6D 95.172 145 6 1 4056 4199 192066890 192067034 2.610000e-55 228.0
59 TraesCS5D01G406500 chr6D 95.775 142 5 1 4060 4201 217860701 217860841 2.610000e-55 228.0
60 TraesCS5D01G406500 chr6D 95.775 142 5 1 4059 4199 256990096 256990237 2.610000e-55 228.0
61 TraesCS5D01G406500 chr6D 95.070 142 7 0 4059 4200 391156111 391156252 3.370000e-54 224.0
62 TraesCS5D01G406500 chr6D 88.660 194 9 6 7077 7261 394214412 394214601 3.370000e-54 224.0
63 TraesCS5D01G406500 chr6D 95.683 139 5 1 4060 4198 144596324 144596461 1.210000e-53 222.0
64 TraesCS5D01G406500 chr6D 94.444 144 8 0 4059 4202 389525484 389525341 1.210000e-53 222.0
65 TraesCS5D01G406500 chr6D 88.083 193 15 2 7077 7261 450350012 450349820 1.210000e-53 222.0
66 TraesCS5D01G406500 chr6D 94.444 144 6 2 4058 4200 456646240 456646382 4.360000e-53 220.0
67 TraesCS5D01G406500 chr6D 86.528 193 18 2 7077 7261 28156841 28156649 1.220000e-48 206.0
68 TraesCS5D01G406500 chr6D 86.224 196 15 5 7077 7261 61767575 61767769 1.580000e-47 202.0
69 TraesCS5D01G406500 chr6D 84.713 157 22 2 7109 7264 143497859 143497704 1.250000e-33 156.0
70 TraesCS5D01G406500 chr3B 95.349 602 25 3 6244 6845 761925402 761924804 0.000000e+00 953.0
71 TraesCS5D01G406500 chr3B 94.711 605 31 1 6242 6845 41795044 41795648 0.000000e+00 939.0
72 TraesCS5D01G406500 chr3B 95.270 148 5 2 4059 4204 153339188 153339041 5.600000e-57 233.0
73 TraesCS5D01G406500 chr3B 92.638 163 11 1 7099 7261 412559245 412559084 5.600000e-57 233.0
74 TraesCS5D01G406500 chr3B 94.631 149 7 1 4058 4205 482578032 482578180 7.250000e-56 230.0
75 TraesCS5D01G406500 chr3B 76.048 167 36 4 2000 2164 597088952 597089116 5.970000e-12 84.2
76 TraesCS5D01G406500 chr6B 91.192 193 9 2 7077 7261 573274667 573274475 1.200000e-63 255.0
77 TraesCS5D01G406500 chr6B 96.454 141 5 0 4059 4199 228607275 228607135 5.600000e-57 233.0
78 TraesCS5D01G406500 chr6B 93.960 149 9 0 4052 4200 233466778 233466630 9.370000e-55 226.0
79 TraesCS5D01G406500 chr2B 90.625 192 10 2 7077 7261 792126371 792126561 2.000000e-61 248.0
80 TraesCS5D01G406500 chr2B 93.865 163 10 0 7099 7261 5220190 5220352 7.200000e-61 246.0
81 TraesCS5D01G406500 chr2B 92.683 164 11 1 7099 7261 96107881 96108044 1.560000e-57 235.0
82 TraesCS5D01G406500 chr2B 93.125 160 9 2 4053 4212 173740805 173740648 5.600000e-57 233.0
83 TraesCS5D01G406500 chr2B 94.156 154 6 3 4055 4206 783007962 783007810 2.010000e-56 231.0
84 TraesCS5D01G406500 chr2B 91.018 167 12 3 4042 4206 782983694 782983529 1.210000e-53 222.0
85 TraesCS5D01G406500 chr2B 88.298 94 11 0 4577 4670 36946897 36946804 7.610000e-21 113.0
86 TraesCS5D01G406500 chr1D 90.625 192 11 1 7077 7261 464379975 464379784 2.000000e-61 248.0
87 TraesCS5D01G406500 chr1D 96.429 140 5 0 4059 4198 161704213 161704074 2.010000e-56 231.0
88 TraesCS5D01G406500 chr1D 95.804 143 5 1 4059 4200 177486904 177487046 7.250000e-56 230.0
89 TraesCS5D01G406500 chr1D 96.429 140 4 1 4062 4200 457285238 457285377 7.250000e-56 230.0
90 TraesCS5D01G406500 chr1D 77.647 170 32 5 2000 2166 391862180 391862346 2.130000e-16 99.0
91 TraesCS5D01G406500 chr1D 83.871 93 15 0 2457 2549 391862645 391862737 1.280000e-13 89.8
92 TraesCS5D01G406500 chr7D 90.104 192 12 1 7077 7261 70148624 70148433 9.310000e-60 243.0
93 TraesCS5D01G406500 chr7D 97.163 141 4 0 4059 4199 625517531 625517671 1.200000e-58 239.0
94 TraesCS5D01G406500 chr7D 95.302 149 6 1 4053 4200 74217679 74217827 1.560000e-57 235.0
95 TraesCS5D01G406500 chr6A 97.183 142 4 0 4059 4200 75370140 75370281 3.350000e-59 241.0
96 TraesCS5D01G406500 chr6A 89.119 193 13 2 7077 7261 371705116 371705308 5.600000e-57 233.0
97 TraesCS5D01G406500 chr6A 96.429 140 5 0 4059 4198 79952359 79952220 2.010000e-56 231.0
98 TraesCS5D01G406500 chr6A 95.804 143 6 0 4058 4200 216183474 216183616 2.010000e-56 231.0
99 TraesCS5D01G406500 chr6A 89.005 191 13 2 7079 7261 158063115 158063305 7.250000e-56 230.0
100 TraesCS5D01G406500 chr6A 94.000 150 7 2 4059 4206 484161776 484161925 9.370000e-55 226.0
101 TraesCS5D01G406500 chr2D 95.918 147 5 1 4055 4200 161767953 161767807 4.330000e-58 237.0
102 TraesCS5D01G406500 chr2D 97.143 140 4 0 4059 4198 440953389 440953250 4.330000e-58 237.0
103 TraesCS5D01G406500 chr2D 92.638 163 11 1 7099 7261 598652564 598652403 5.600000e-57 233.0
104 TraesCS5D01G406500 chr2D 100.000 31 0 0 3645 3675 357975112 357975142 3.620000e-04 58.4
105 TraesCS5D01G406500 chr1B 92.121 165 9 3 7099 7261 218726961 218727123 7.250000e-56 230.0
106 TraesCS5D01G406500 chr1B 88.542 192 15 1 7077 7261 571977300 571977109 9.370000e-55 226.0
107 TraesCS5D01G406500 chr1B 88.482 191 15 1 7077 7260 69369454 69369644 3.370000e-54 224.0
108 TraesCS5D01G406500 chr1B 93.421 152 9 1 4054 4204 655142915 655142764 3.370000e-54 224.0
109 TraesCS5D01G406500 chr1B 78.235 170 31 5 2000 2166 530779773 530779607 4.580000e-18 104.0
110 TraesCS5D01G406500 chr1B 90.909 66 6 0 2484 2549 530779281 530779216 1.280000e-13 89.8
111 TraesCS5D01G406500 chr1A 88.265 196 15 2 7077 7264 418173270 418173075 2.610000e-55 228.0
112 TraesCS5D01G406500 chr1A 88.265 196 15 2 7077 7264 418221133 418220938 2.610000e-55 228.0
113 TraesCS5D01G406500 chr1A 88.144 194 15 2 7077 7262 139917928 139918121 3.370000e-54 224.0
114 TraesCS5D01G406500 chr1A 93.960 149 8 1 4052 4200 263602041 263602188 3.370000e-54 224.0
115 TraesCS5D01G406500 chr1A 88.083 193 15 2 7077 7261 101280198 101280390 1.210000e-53 222.0
116 TraesCS5D01G406500 chr1A 92.810 153 9 2 4046 4198 370568131 370567981 4.360000e-53 220.0
117 TraesCS5D01G406500 chr1A 78.363 171 29 7 2000 2166 493501993 493501827 4.580000e-18 104.0
118 TraesCS5D01G406500 chrUn 94.521 146 7 1 4059 4203 110368676 110368531 3.370000e-54 224.0
119 TraesCS5D01G406500 chrUn 94.964 139 7 0 4059 4197 70911451 70911589 1.570000e-52 219.0
120 TraesCS5D01G406500 chrUn 94.964 139 7 0 4059 4197 70914840 70914978 1.570000e-52 219.0
121 TraesCS5D01G406500 chrUn 92.763 152 9 2 4060 4210 94488767 94488617 1.570000e-52 219.0
122 TraesCS5D01G406500 chrUn 94.326 141 8 0 4059 4199 69251882 69252022 5.640000e-52 217.0
123 TraesCS5D01G406500 chrUn 90.798 163 14 1 7099 7261 472759551 472759390 5.640000e-52 217.0
124 TraesCS5D01G406500 chrUn 93.662 142 9 0 4058 4199 69267811 69267670 7.300000e-51 213.0
125 TraesCS5D01G406500 chrUn 92.466 146 11 0 4054 4199 476277065 476276920 9.440000e-50 209.0
126 TraesCS5D01G406500 chrUn 93.571 140 8 1 4061 4199 85076935 85076796 3.400000e-49 207.0
127 TraesCS5D01G406500 chrUn 93.571 140 8 1 4061 4199 282310537 282310676 3.400000e-49 207.0
128 TraesCS5D01G406500 chrUn 89.571 163 16 1 4047 4208 79011867 79012029 1.220000e-48 206.0
129 TraesCS5D01G406500 chrUn 91.837 147 12 0 4054 4200 98512060 98511914 1.220000e-48 206.0
130 TraesCS5D01G406500 chrUn 89.032 155 16 1 7099 7252 233049326 233049480 3.420000e-44 191.0
131 TraesCS5D01G406500 chrUn 87.421 159 19 1 7099 7256 391659493 391659651 2.060000e-41 182.0
132 TraesCS5D01G406500 chrUn 83.036 112 11 2 7077 7180 441950645 441950756 2.760000e-15 95.3
133 TraesCS5D01G406500 chrUn 87.143 70 6 3 7194 7261 479636401 479636469 9.990000e-10 76.8
134 TraesCS5D01G406500 chrUn 95.652 46 2 0 7216 7261 65858977 65859022 3.590000e-09 75.0
135 TraesCS5D01G406500 chrUn 95.652 46 2 0 7216 7261 65982139 65982184 3.590000e-09 75.0
136 TraesCS5D01G406500 chr3D 77.011 174 31 8 4581 4748 487769807 487769977 3.570000e-14 91.6
137 TraesCS5D01G406500 chr3D 76.048 167 36 4 2000 2164 454509446 454509610 5.970000e-12 84.2
138 TraesCS5D01G406500 chr3A 76.506 166 37 2 2000 2164 596514863 596515027 1.280000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G406500 chr5D 472235772 472245049 9277 False 5418.333333 6444 100.0000 1 9278 3 chr5D.!!$F3 9277
1 TraesCS5D01G406500 chr5B 578538456 578549097 10641 False 1015.980000 3140 92.0175 2 9277 10 chr5B.!!$F4 9275
2 TraesCS5D01G406500 chr5B 509461145 509462204 1059 False 568.666667 983 93.2340 5988 7261 3 chr5B.!!$F3 1273
3 TraesCS5D01G406500 chr5A 591442760 591447320 4560 False 1229.250000 1997 88.4345 997 8943 4 chr5A.!!$F1 7946
4 TraesCS5D01G406500 chr5A 700784222 700785073 851 True 1109.000000 1109 90.2190 5988 6845 1 chr5A.!!$R1 857
5 TraesCS5D01G406500 chr7B 43563535 43564376 841 False 1277.000000 1277 93.8520 5988 6845 1 chr7B.!!$F1 857
6 TraesCS5D01G406500 chr7B 202772385 202772988 603 False 941.000000 941 94.7190 6240 6845 1 chr7B.!!$F2 605
7 TraesCS5D01G406500 chr7B 628461368 628461913 545 False 564.000000 564 85.3790 4198 4748 1 chr7B.!!$F3 550
8 TraesCS5D01G406500 chr4B 57802302 57803134 832 False 1234.000000 1234 93.1550 5988 6845 1 chr4B.!!$F1 857
9 TraesCS5D01G406500 chr4B 75440385 75441217 832 True 1205.000000 1205 92.5030 5984 6845 1 chr4B.!!$R1 861
10 TraesCS5D01G406500 chr4B 599368223 599369073 850 True 1201.000000 1201 92.1480 5988 6845 1 chr4B.!!$R2 857
11 TraesCS5D01G406500 chr4D 329140657 329141504 847 False 1171.000000 1171 91.5800 5988 6845 1 chr4D.!!$F6 857
12 TraesCS5D01G406500 chr4A 533906813 533907667 854 True 1155.000000 1155 91.1290 5988 6845 1 chr4A.!!$R2 857
13 TraesCS5D01G406500 chr7A 698746051 698746906 855 False 1149.000000 1149 90.8990 5977 6845 1 chr7A.!!$F1 868
14 TraesCS5D01G406500 chr6D 450349820 450350640 820 True 596.000000 970 92.1895 6252 7261 2 chr6D.!!$R5 1009
15 TraesCS5D01G406500 chr3B 761924804 761925402 598 True 953.000000 953 95.3490 6244 6845 1 chr3B.!!$R3 601
16 TraesCS5D01G406500 chr3B 41795044 41795648 604 False 939.000000 939 94.7110 6242 6845 1 chr3B.!!$F1 603
17 TraesCS5D01G406500 chrUn 70911451 70914978 3527 False 219.000000 219 94.9640 4059 4197 2 chrUn.!!$F10 138

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 1153 0.173708 GTGTCCCTCGCCTCTAGTTG 59.826 60.0 0.00 0.00 0.00 3.16 F
2552 2926 0.468771 CCCCCGTCCGAGGTACTATT 60.469 60.0 0.00 0.00 41.55 1.73 F
2861 3250 0.106167 TGGGGACGGAGGAGTATCTG 60.106 60.0 0.00 0.00 33.73 2.90 F
4050 6981 0.096976 GGCGATCCATCAACGTTGTG 59.903 55.0 26.47 21.68 0.00 3.33 F
4127 7058 0.251297 CACCCAGGTTCAAGGCATGA 60.251 55.0 0.00 0.00 35.85 3.07 F
5929 11272 0.663568 CGTTCGAGCTGACCGAGTTT 60.664 55.0 0.00 0.00 33.85 2.66 F
7296 12835 1.319614 CGCCCCCGTCCATGAAAATT 61.320 55.0 0.00 0.00 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2772 3153 0.104356 TTTGGGGGACAGTGGGAGTA 60.104 55.0 0.00 0.0 0.00 2.59 R
4031 6962 0.096976 CACAACGTTGATGGATCGCC 59.903 55.0 33.66 0.0 0.00 5.54 R
4054 6985 0.390860 CTATGCCTTAGTCTGCGCCT 59.609 55.0 4.18 0.0 0.00 5.52 R
5710 11051 0.106519 AAGGCCACCATGCACCTATC 60.107 55.0 5.01 0.0 0.00 2.08 R
5952 11296 0.387565 GGATTTGGTTGTGGTTGCGT 59.612 50.0 0.00 0.0 0.00 5.24 R
7374 12913 1.276622 AGGACAACCCTCGCTTGTAT 58.723 50.0 0.00 0.0 43.31 2.29 R
8941 14496 0.953727 TGTGCACACTCATGAAAGGC 59.046 50.0 17.42 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 2.039879 AGCCATCGTTGTTCTAGGGTTT 59.960 45.455 0.00 0.00 0.00 3.27
83 84 2.161609 CCATCGTTGTTCTAGGGTTTGC 59.838 50.000 0.00 0.00 0.00 3.68
115 116 7.417612 TGAATTGAAGAAACTCACACTTAAGC 58.582 34.615 1.29 0.00 0.00 3.09
198 199 6.769822 CCAGGAATATCTTGCTCAACATTACT 59.230 38.462 0.00 0.00 29.43 2.24
199 200 7.255035 CCAGGAATATCTTGCTCAACATTACTG 60.255 40.741 0.00 0.00 35.17 2.74
215 218 7.713764 ACATTACTGCTTCCATTTTGTTTTC 57.286 32.000 0.00 0.00 0.00 2.29
216 219 6.420604 ACATTACTGCTTCCATTTTGTTTTCG 59.579 34.615 0.00 0.00 0.00 3.46
219 222 4.803613 ACTGCTTCCATTTTGTTTTCGTTC 59.196 37.500 0.00 0.00 0.00 3.95
221 224 5.415221 TGCTTCCATTTTGTTTTCGTTCTT 58.585 33.333 0.00 0.00 0.00 2.52
222 225 5.518487 TGCTTCCATTTTGTTTTCGTTCTTC 59.482 36.000 0.00 0.00 0.00 2.87
224 227 6.035542 GCTTCCATTTTGTTTTCGTTCTTCAA 59.964 34.615 0.00 0.00 0.00 2.69
241 246 8.122952 CGTTCTTCAATTATAATGAACAGGGAC 58.877 37.037 18.85 9.68 35.07 4.46
242 247 9.178758 GTTCTTCAATTATAATGAACAGGGACT 57.821 33.333 16.03 0.00 33.68 3.85
255 260 1.859302 AGGGACTGACAGCTAGAAGG 58.141 55.000 1.25 0.00 37.18 3.46
256 261 1.077993 AGGGACTGACAGCTAGAAGGT 59.922 52.381 1.25 0.00 37.18 3.50
257 262 3.150067 AGGGACTGACAGCTAGAAGGTG 61.150 54.545 1.25 4.65 43.74 4.00
258 263 2.171840 GGACTGACAGCTAGAAGGTGA 58.828 52.381 12.68 0.00 45.98 4.02
259 264 2.763448 GGACTGACAGCTAGAAGGTGAT 59.237 50.000 12.68 0.00 45.98 3.06
260 265 3.196685 GGACTGACAGCTAGAAGGTGATT 59.803 47.826 12.68 0.00 45.98 2.57
261 266 4.402793 GGACTGACAGCTAGAAGGTGATTA 59.597 45.833 12.68 0.00 45.98 1.75
262 267 5.105310 GGACTGACAGCTAGAAGGTGATTAA 60.105 44.000 12.68 0.00 45.98 1.40
263 268 6.360370 ACTGACAGCTAGAAGGTGATTAAA 57.640 37.500 12.68 0.00 45.98 1.52
264 269 6.769512 ACTGACAGCTAGAAGGTGATTAAAA 58.230 36.000 12.68 0.00 45.98 1.52
272 277 8.041919 AGCTAGAAGGTGATTAAAAACTAGGAC 58.958 37.037 0.00 0.00 0.00 3.85
275 280 7.974504 AGAAGGTGATTAAAAACTAGGACTCA 58.025 34.615 0.00 0.00 0.00 3.41
319 327 6.535508 AGATTGAGCGTAAGTCTTGTTTATCC 59.464 38.462 0.00 0.00 41.68 2.59
419 427 6.748333 ATTGATGTTTATATCATCTGGCCG 57.252 37.500 14.95 0.00 41.30 6.13
421 429 5.620206 TGATGTTTATATCATCTGGCCGTT 58.380 37.500 14.95 0.00 41.30 4.44
423 431 7.220740 TGATGTTTATATCATCTGGCCGTTAA 58.779 34.615 14.95 0.00 41.30 2.01
424 432 6.854496 TGTTTATATCATCTGGCCGTTAAC 57.146 37.500 0.00 0.00 0.00 2.01
437 445 2.221799 CGTTAACGGCTGCAAAGTAC 57.778 50.000 20.24 0.00 35.37 2.73
438 446 1.136169 CGTTAACGGCTGCAAAGTACC 60.136 52.381 20.24 0.00 35.37 3.34
439 447 1.198408 GTTAACGGCTGCAAAGTACCC 59.802 52.381 0.50 0.00 0.00 3.69
441 449 0.605589 AACGGCTGCAAAGTACCCTC 60.606 55.000 0.50 0.00 0.00 4.30
442 450 2.100631 CGGCTGCAAAGTACCCTCG 61.101 63.158 0.50 0.00 0.00 4.63
456 464 4.711949 CTCGGCCAGCAGCTTGGT 62.712 66.667 2.24 0.00 43.05 3.67
462 470 1.451028 CCAGCAGCTTGGTAGAGGC 60.451 63.158 0.00 0.00 33.38 4.70
474 482 6.044871 AGCTTGGTAGAGGCCTGAAATATTAT 59.955 38.462 12.00 0.00 0.00 1.28
476 484 7.308830 GCTTGGTAGAGGCCTGAAATATTATTG 60.309 40.741 12.00 0.00 0.00 1.90
478 486 6.102615 TGGTAGAGGCCTGAAATATTATTGGT 59.897 38.462 12.00 0.00 0.00 3.67
480 488 7.824779 GGTAGAGGCCTGAAATATTATTGGTAG 59.175 40.741 12.00 0.00 0.00 3.18
483 491 8.673251 AGAGGCCTGAAATATTATTGGTAGAAT 58.327 33.333 12.00 0.00 0.00 2.40
540 548 7.562454 TGAAACGAGAACTTGGTTATCTTTT 57.438 32.000 8.47 8.47 37.71 2.27
553 561 7.687941 TGGTTATCTTTTGATTCAAGGACTC 57.312 36.000 0.00 0.00 40.19 3.36
581 589 1.626654 GCAGGGTCACAACGTCATCG 61.627 60.000 0.00 0.00 43.34 3.84
584 592 2.726691 GGTCACAACGTCATCGCCG 61.727 63.158 0.00 0.00 41.18 6.46
586 594 4.147322 CACAACGTCATCGCCGCC 62.147 66.667 0.00 0.00 41.18 6.13
589 597 4.814294 AACGTCATCGCCGCCTCC 62.814 66.667 0.00 0.00 41.18 4.30
627 635 4.025813 TCCACGTAAACTAGAACAAAACGC 60.026 41.667 0.00 0.00 32.42 4.84
637 645 2.051345 CAAAACGCTGGTCCACGC 60.051 61.111 12.07 8.10 0.00 5.34
647 655 4.659874 GTCCACGCGCGTTGTTGG 62.660 66.667 35.90 30.19 0.00 3.77
654 662 4.639171 CGCGTTGTTGGGGGCAAC 62.639 66.667 0.00 0.00 41.81 4.17
656 664 3.039134 CGTTGTTGGGGGCAACTC 58.961 61.111 0.00 0.00 42.73 3.01
664 672 4.167597 GGGGCAACTCCGTTTTGA 57.832 55.556 0.00 0.00 34.94 2.69
687 906 2.957402 TGATAATGCCCCTCCATGAC 57.043 50.000 0.00 0.00 0.00 3.06
698 917 4.067896 CCCCTCCATGACAATTAGAATCG 58.932 47.826 0.00 0.00 0.00 3.34
707 926 7.276218 CCATGACAATTAGAATCGCAAATGTTT 59.724 33.333 0.00 0.00 0.00 2.83
710 929 8.028354 TGACAATTAGAATCGCAAATGTTTGAT 58.972 29.630 9.53 0.00 40.55 2.57
712 931 6.817270 ATTAGAATCGCAAATGTTTGATGC 57.183 33.333 9.53 0.00 40.55 3.91
765 1012 5.578336 GCTTGGATCCACTTAGCAAATTTTC 59.422 40.000 25.56 0.46 0.00 2.29
770 1017 6.038714 GGATCCACTTAGCAAATTTTCGAGAT 59.961 38.462 6.95 0.00 0.00 2.75
780 1027 7.196331 AGCAAATTTTCGAGATAATTAGCCAC 58.804 34.615 0.00 0.00 0.00 5.01
783 1030 6.619801 ATTTTCGAGATAATTAGCCACCAC 57.380 37.500 0.00 0.00 0.00 4.16
790 1038 2.632987 AATTAGCCACCACCGTATCC 57.367 50.000 0.00 0.00 0.00 2.59
792 1040 0.683828 TTAGCCACCACCGTATCCGA 60.684 55.000 0.00 0.00 35.63 4.55
804 1052 6.660521 ACCACCGTATCCGATATAATGAACTA 59.339 38.462 0.00 0.00 35.63 2.24
806 1054 8.195436 CCACCGTATCCGATATAATGAACTAAT 58.805 37.037 0.00 0.00 35.63 1.73
849 1097 1.006220 CACGGCTCACACACAGCTA 60.006 57.895 0.00 0.00 37.05 3.32
851 1099 2.097038 CGGCTCACACACAGCTAGC 61.097 63.158 6.62 6.62 37.05 3.42
852 1100 1.294780 GGCTCACACACAGCTAGCT 59.705 57.895 12.68 12.68 37.05 3.32
859 1107 1.023513 CACACAGCTAGCTTGGAGGC 61.024 60.000 16.46 0.00 0.00 4.70
862 1110 1.153208 CAGCTAGCTTGGAGGCAGG 60.153 63.158 16.46 0.00 34.17 4.85
863 1111 2.191641 GCTAGCTTGGAGGCAGGG 59.808 66.667 7.70 0.00 34.17 4.45
864 1112 2.370445 GCTAGCTTGGAGGCAGGGA 61.370 63.158 7.70 0.00 34.17 4.20
865 1113 1.828768 CTAGCTTGGAGGCAGGGAG 59.171 63.158 0.00 0.00 34.17 4.30
866 1114 0.980231 CTAGCTTGGAGGCAGGGAGT 60.980 60.000 0.00 0.00 34.17 3.85
867 1115 0.338467 TAGCTTGGAGGCAGGGAGTA 59.662 55.000 0.00 0.00 34.17 2.59
901 1152 0.971447 GGTGTCCCTCGCCTCTAGTT 60.971 60.000 0.00 0.00 42.91 2.24
902 1153 0.173708 GTGTCCCTCGCCTCTAGTTG 59.826 60.000 0.00 0.00 0.00 3.16
904 1155 1.005097 TGTCCCTCGCCTCTAGTTGTA 59.995 52.381 0.00 0.00 0.00 2.41
905 1156 2.308690 GTCCCTCGCCTCTAGTTGTAT 58.691 52.381 0.00 0.00 0.00 2.29
906 1157 2.694109 GTCCCTCGCCTCTAGTTGTATT 59.306 50.000 0.00 0.00 0.00 1.89
908 1159 3.383825 TCCCTCGCCTCTAGTTGTATTTC 59.616 47.826 0.00 0.00 0.00 2.17
910 1161 3.492829 CCTCGCCTCTAGTTGTATTTCCC 60.493 52.174 0.00 0.00 0.00 3.97
911 1162 3.371965 TCGCCTCTAGTTGTATTTCCCT 58.628 45.455 0.00 0.00 0.00 4.20
912 1163 3.383825 TCGCCTCTAGTTGTATTTCCCTC 59.616 47.826 0.00 0.00 0.00 4.30
913 1164 3.132289 CGCCTCTAGTTGTATTTCCCTCA 59.868 47.826 0.00 0.00 0.00 3.86
914 1165 4.698575 GCCTCTAGTTGTATTTCCCTCAG 58.301 47.826 0.00 0.00 0.00 3.35
915 1166 4.698575 CCTCTAGTTGTATTTCCCTCAGC 58.301 47.826 0.00 0.00 0.00 4.26
916 1167 4.407296 CCTCTAGTTGTATTTCCCTCAGCT 59.593 45.833 0.00 0.00 0.00 4.24
917 1168 5.344743 TCTAGTTGTATTTCCCTCAGCTG 57.655 43.478 7.63 7.63 0.00 4.24
949 1200 3.681835 GTCCCTGTCGCACGGTCT 61.682 66.667 0.00 0.00 0.00 3.85
951 1202 2.432628 CCCTGTCGCACGGTCTTC 60.433 66.667 0.00 0.00 0.00 2.87
952 1203 2.651361 CCTGTCGCACGGTCTTCT 59.349 61.111 0.00 0.00 0.00 2.85
953 1204 1.444553 CCTGTCGCACGGTCTTCTC 60.445 63.158 0.00 0.00 0.00 2.87
958 1213 2.579738 GCACGGTCTTCTCCCTCC 59.420 66.667 0.00 0.00 0.00 4.30
982 1237 2.818714 CGAGAAGCAGCAGCAGGG 60.819 66.667 3.17 0.00 45.49 4.45
983 1238 2.438075 GAGAAGCAGCAGCAGGGG 60.438 66.667 3.17 0.00 45.49 4.79
1132 1400 2.371179 ACTGCTGGATCATCCTACATGG 59.629 50.000 4.96 0.00 37.46 3.66
1209 1477 2.987547 GTCGACGAGGTGACCCCA 60.988 66.667 0.00 0.00 34.66 4.96
1282 1564 4.980805 TGGTGTTGGTCTCGCCGC 62.981 66.667 0.00 0.00 41.21 6.53
1295 1577 2.505557 GCCGCTGCAAGTCAATGC 60.506 61.111 0.00 0.00 46.58 3.56
1355 1661 6.611381 TGCTAATTTCTTGAAACAGGAATCG 58.389 36.000 0.00 0.00 30.01 3.34
1365 1671 2.550830 ACAGGAATCGCCCATGATAC 57.449 50.000 0.00 0.00 37.37 2.24
1414 1720 9.787532 TTTTTGTGCATTAATATAGACTCTTGC 57.212 29.630 0.00 0.00 0.00 4.01
1424 1730 6.723298 ATATAGACTCTTGCTACTGTTGCT 57.277 37.500 14.81 0.00 0.00 3.91
1433 1739 3.664107 TGCTACTGTTGCTAGTCTTTGG 58.336 45.455 14.81 0.00 32.19 3.28
1440 1746 1.919240 TGCTAGTCTTTGGTCGAGGA 58.081 50.000 0.00 0.00 0.00 3.71
1446 1752 2.840651 AGTCTTTGGTCGAGGATTCCAT 59.159 45.455 5.29 0.00 0.00 3.41
1455 1761 2.154462 CGAGGATTCCATTACATGCCC 58.846 52.381 5.29 0.00 0.00 5.36
1459 1765 2.242043 GATTCCATTACATGCCCTGGG 58.758 52.381 8.86 8.86 0.00 4.45
1466 1772 3.918294 TTACATGCCCTGGGTTACTAC 57.082 47.619 15.56 0.00 0.00 2.73
1484 1790 7.873505 GGTTACTACCTCCATAGAATGAATGAC 59.126 40.741 0.00 0.00 41.53 3.06
1501 1807 9.793252 AATGAATGACAATCTTAGTGCAAATAC 57.207 29.630 0.00 0.00 0.00 1.89
1511 1817 8.757982 ATCTTAGTGCAAATACAAGATCCATT 57.242 30.769 0.00 0.00 31.91 3.16
1544 1850 6.709018 TTTTTCTTTCTGGGAACGAGATTT 57.291 33.333 0.00 0.00 0.00 2.17
1545 1851 7.811117 TTTTTCTTTCTGGGAACGAGATTTA 57.189 32.000 0.00 0.00 0.00 1.40
1546 1852 6.796705 TTTCTTTCTGGGAACGAGATTTAC 57.203 37.500 0.00 0.00 0.00 2.01
1547 1853 4.828829 TCTTTCTGGGAACGAGATTTACC 58.171 43.478 0.00 0.00 0.00 2.85
1548 1854 2.953466 TCTGGGAACGAGATTTACCG 57.047 50.000 0.00 0.00 0.00 4.02
1549 1855 2.173519 TCTGGGAACGAGATTTACCGT 58.826 47.619 0.00 0.00 41.14 4.83
1550 1856 3.355378 TCTGGGAACGAGATTTACCGTA 58.645 45.455 0.00 0.00 38.13 4.02
1551 1857 3.379372 TCTGGGAACGAGATTTACCGTAG 59.621 47.826 0.00 0.00 38.13 3.51
1552 1858 2.159198 TGGGAACGAGATTTACCGTAGC 60.159 50.000 0.00 0.00 38.13 3.58
1553 1859 2.114825 GGAACGAGATTTACCGTAGCG 58.885 52.381 0.00 0.00 38.13 4.26
1554 1860 2.478539 GGAACGAGATTTACCGTAGCGT 60.479 50.000 0.00 0.00 38.13 5.07
1555 1861 2.927553 ACGAGATTTACCGTAGCGTT 57.072 45.000 0.00 0.00 37.23 4.84
1556 1862 3.221964 ACGAGATTTACCGTAGCGTTT 57.778 42.857 0.00 0.00 37.23 3.60
1557 1863 4.355543 ACGAGATTTACCGTAGCGTTTA 57.644 40.909 0.00 0.00 37.23 2.01
1558 1864 4.732784 ACGAGATTTACCGTAGCGTTTAA 58.267 39.130 0.00 0.00 37.23 1.52
1559 1865 4.558860 ACGAGATTTACCGTAGCGTTTAAC 59.441 41.667 0.00 0.00 37.23 2.01
1560 1866 4.795278 CGAGATTTACCGTAGCGTTTAACT 59.205 41.667 0.00 0.00 0.00 2.24
1561 1867 5.275602 CGAGATTTACCGTAGCGTTTAACTG 60.276 44.000 0.00 0.00 0.00 3.16
1562 1868 4.328169 AGATTTACCGTAGCGTTTAACTGC 59.672 41.667 4.33 4.33 0.00 4.40
1563 1869 2.721274 TACCGTAGCGTTTAACTGCA 57.279 45.000 12.53 0.00 0.00 4.41
1564 1870 2.088950 ACCGTAGCGTTTAACTGCAT 57.911 45.000 12.53 3.37 0.00 3.96
1568 1874 3.241995 CCGTAGCGTTTAACTGCATCTTC 60.242 47.826 12.53 1.08 0.00 2.87
1663 2007 5.376854 ACACATTGAGATAAAACTGCACC 57.623 39.130 0.00 0.00 0.00 5.01
1670 2014 4.215399 TGAGATAAAACTGCACCCTTTTCG 59.785 41.667 0.00 0.00 0.00 3.46
1723 2073 1.877576 CTACCAGCAGCACCAGACGA 61.878 60.000 0.00 0.00 0.00 4.20
1737 2087 4.891566 ACGACTGCATCCTTCGTC 57.108 55.556 6.91 0.10 42.11 4.20
1738 2088 2.268022 ACGACTGCATCCTTCGTCT 58.732 52.632 6.91 0.00 42.11 4.18
1779 2129 3.869272 CCCTACCCGTCGTCGTCG 61.869 72.222 4.87 4.87 38.55 5.12
1780 2130 3.121030 CCTACCCGTCGTCGTCGT 61.121 66.667 10.76 0.00 38.33 4.34
1781 2131 2.397252 CTACCCGTCGTCGTCGTC 59.603 66.667 10.76 0.00 38.33 4.20
2142 2501 1.134159 GGCTGCATCAAGGAGATCACT 60.134 52.381 0.50 0.00 38.04 3.41
2552 2926 0.468771 CCCCCGTCCGAGGTACTATT 60.469 60.000 0.00 0.00 41.55 1.73
2553 2927 1.202927 CCCCCGTCCGAGGTACTATTA 60.203 57.143 0.00 0.00 41.55 0.98
2634 3011 2.002505 ACTGAGTACCTGCAGACACT 57.997 50.000 17.39 17.19 36.07 3.55
2749 3130 9.513906 TTCTCGATCAACATCTCTATCTCTATT 57.486 33.333 0.00 0.00 0.00 1.73
2777 3158 9.778741 CTATCTGTCTATCCATCTATCTACTCC 57.221 40.741 0.00 0.00 0.00 3.85
2778 3159 6.964464 TCTGTCTATCCATCTATCTACTCCC 58.036 44.000 0.00 0.00 0.00 4.30
2779 3160 6.505700 TCTGTCTATCCATCTATCTACTCCCA 59.494 42.308 0.00 0.00 0.00 4.37
2780 3161 6.486056 TGTCTATCCATCTATCTACTCCCAC 58.514 44.000 0.00 0.00 0.00 4.61
2781 3162 6.275855 TGTCTATCCATCTATCTACTCCCACT 59.724 42.308 0.00 0.00 0.00 4.00
2782 3163 6.601613 GTCTATCCATCTATCTACTCCCACTG 59.398 46.154 0.00 0.00 0.00 3.66
2783 3164 4.816048 TCCATCTATCTACTCCCACTGT 57.184 45.455 0.00 0.00 0.00 3.55
2784 3165 4.730966 TCCATCTATCTACTCCCACTGTC 58.269 47.826 0.00 0.00 0.00 3.51
2785 3166 3.829601 CCATCTATCTACTCCCACTGTCC 59.170 52.174 0.00 0.00 0.00 4.02
2805 3186 2.094752 CCCCCAAAATGTAAGACGCTTG 60.095 50.000 2.86 0.00 0.00 4.01
2808 3189 3.980775 CCCAAAATGTAAGACGCTTGTTG 59.019 43.478 2.86 0.00 0.00 3.33
2848 3236 4.316205 AAAACGTCTTTCATTTGGGGAC 57.684 40.909 0.00 0.00 0.00 4.46
2861 3250 0.106167 TGGGGACGGAGGAGTATCTG 60.106 60.000 0.00 0.00 33.73 2.90
2931 3320 1.068474 CGTTCGCTTCCATCGTTTCT 58.932 50.000 0.00 0.00 0.00 2.52
2961 3350 2.539302 CCATCAATTCACACCCCCTTT 58.461 47.619 0.00 0.00 0.00 3.11
2967 3356 0.184933 TTCACACCCCCTTTCACTGG 59.815 55.000 0.00 0.00 0.00 4.00
2978 3367 6.616137 ACCCCCTTTCACTGGTTTATTTTAAA 59.384 34.615 0.00 0.00 0.00 1.52
2979 3368 7.127493 ACCCCCTTTCACTGGTTTATTTTAAAA 59.873 33.333 2.51 2.51 0.00 1.52
2980 3369 7.993758 CCCCCTTTCACTGGTTTATTTTAAAAA 59.006 33.333 4.44 0.00 0.00 1.94
3004 3393 3.825143 AAATAGATTGCATGGCCCAAC 57.175 42.857 0.00 0.00 0.00 3.77
3005 3394 2.457813 ATAGATTGCATGGCCCAACA 57.542 45.000 0.00 0.00 0.00 3.33
3007 3396 1.575419 AGATTGCATGGCCCAACATT 58.425 45.000 0.00 0.00 0.00 2.71
3017 3406 1.378514 CCCAACATTAGCAGGCCGT 60.379 57.895 0.00 0.00 0.00 5.68
3033 3422 2.047560 GTCTCCCCAACCGTTCGG 60.048 66.667 9.81 9.81 0.00 4.30
3042 3431 0.318107 CAACCGTTCGGTCTACGTGT 60.318 55.000 17.19 0.00 44.69 4.49
3107 6036 1.276989 TCGCCGTCTTCCCTTGTAATT 59.723 47.619 0.00 0.00 0.00 1.40
3108 6037 2.496871 TCGCCGTCTTCCCTTGTAATTA 59.503 45.455 0.00 0.00 0.00 1.40
3109 6038 2.864343 CGCCGTCTTCCCTTGTAATTAG 59.136 50.000 0.00 0.00 0.00 1.73
3383 6312 0.805322 CTGCAGCAGGTCTCGTCATC 60.805 60.000 15.35 0.00 0.00 2.92
3445 6374 1.068610 CACCATTACAACACGCCTTGG 60.069 52.381 0.00 0.00 0.00 3.61
3453 6382 0.968405 AACACGCCTTGGCATCAAAT 59.032 45.000 12.45 0.00 31.77 2.32
3473 6402 3.403277 GCAGCGAGCGATCATTGT 58.597 55.556 0.00 0.00 0.00 2.71
3497 6426 4.208686 CCCCTGCCGTCTCGTAGC 62.209 72.222 0.00 0.00 0.00 3.58
3531 6460 3.419828 CAAGTCGTTGCAGCACCA 58.580 55.556 0.00 0.00 0.00 4.17
3613 6544 1.139095 CCTGGTCGCTACTTCCGTC 59.861 63.158 0.00 0.00 0.00 4.79
3623 6554 2.735762 GCTACTTCCGTCTGTCACCATC 60.736 54.545 0.00 0.00 0.00 3.51
3657 6588 1.336755 CTTGCCGGTTGTAGCTTTTGT 59.663 47.619 1.90 0.00 0.00 2.83
3663 6594 2.098443 CGGTTGTAGCTTTTGTGGTTGT 59.902 45.455 0.00 0.00 0.00 3.32
3680 6611 2.772568 TGTCGGTTGCAACAAATCAG 57.227 45.000 29.55 13.45 0.00 2.90
3687 6618 3.674753 GGTTGCAACAAATCAGGATTTCG 59.325 43.478 29.55 4.14 38.84 3.46
3693 6624 5.385617 CAACAAATCAGGATTTCGTCTGTC 58.614 41.667 4.34 0.00 38.84 3.51
3757 6688 1.000394 GGTAGCCGGTTGCAACAAATT 60.000 47.619 29.55 14.95 44.83 1.82
3768 6699 6.912591 CGGTTGCAACAAATTAGGATTCTATC 59.087 38.462 29.55 6.23 0.00 2.08
3779 6710 0.663568 GATTCTATCCGTCACCGCCG 60.664 60.000 0.00 0.00 0.00 6.46
3793 6724 2.642254 CGCCGTAGAGAACACCCCA 61.642 63.158 0.00 0.00 0.00 4.96
3795 6726 1.255667 GCCGTAGAGAACACCCCAGA 61.256 60.000 0.00 0.00 0.00 3.86
3823 6754 4.535526 AGCAAAAACAGTTGTTGGTTCT 57.464 36.364 14.17 2.63 35.02 3.01
3828 6759 5.500645 AAAACAGTTGTTGGTTCTAGCTC 57.499 39.130 0.00 0.00 35.02 4.09
3829 6760 4.423625 AACAGTTGTTGGTTCTAGCTCT 57.576 40.909 0.00 0.00 36.80 4.09
3849 6780 1.427020 GCTTCAGTCGATTGCAGCC 59.573 57.895 19.18 4.23 32.23 4.85
3910 6841 2.289945 CCCATATGCTGGTTCTAGCTCC 60.290 54.545 9.35 0.00 44.30 4.70
3911 6842 2.611473 CCATATGCTGGTTCTAGCTCCG 60.611 54.545 9.35 0.00 44.01 4.63
3943 6874 2.346766 TCCAGCATTTGTGACACACT 57.653 45.000 8.05 0.00 35.11 3.55
3944 6875 3.483808 TCCAGCATTTGTGACACACTA 57.516 42.857 8.05 0.00 35.11 2.74
3955 6886 4.314961 TGTGACACACTATTGTAGCAAGG 58.685 43.478 3.56 0.00 35.11 3.61
3956 6887 3.684788 GTGACACACTATTGTAGCAAGGG 59.315 47.826 0.00 0.00 33.30 3.95
3957 6888 2.678336 GACACACTATTGTAGCAAGGGC 59.322 50.000 0.00 0.00 34.96 5.19
3967 6898 3.787001 GCAAGGGCTCTAGGCGGT 61.787 66.667 0.00 0.00 42.94 5.68
3968 6899 2.501610 CAAGGGCTCTAGGCGGTC 59.498 66.667 0.00 0.00 42.94 4.79
3969 6900 3.148279 AAGGGCTCTAGGCGGTCG 61.148 66.667 0.00 0.00 42.94 4.79
3972 6903 4.577246 GGCTCTAGGCGGTCGCAG 62.577 72.222 17.21 6.99 44.11 5.18
3974 6905 3.826754 CTCTAGGCGGTCGCAGCA 61.827 66.667 17.21 0.63 44.11 4.41
3975 6906 3.144120 CTCTAGGCGGTCGCAGCAT 62.144 63.158 17.21 2.73 44.11 3.79
3976 6907 2.202932 CTAGGCGGTCGCAGCATT 60.203 61.111 17.21 0.15 44.11 3.56
3977 6908 2.202878 TAGGCGGTCGCAGCATTC 60.203 61.111 17.21 0.00 44.11 2.67
3996 6927 3.463505 CGTCACGCGCTTCTGATT 58.536 55.556 5.73 0.00 0.00 2.57
3997 6928 2.648972 CGTCACGCGCTTCTGATTA 58.351 52.632 5.73 0.00 0.00 1.75
4030 6961 1.823169 TACGAGTGTGTCCAAGCCCC 61.823 60.000 0.00 0.00 0.00 5.80
4031 6962 2.358737 GAGTGTGTCCAAGCCCCG 60.359 66.667 0.00 0.00 0.00 5.73
4043 6974 4.562425 GCCCCGGCGATCCATCAA 62.562 66.667 9.30 0.00 0.00 2.57
4044 6975 2.591715 CCCCGGCGATCCATCAAC 60.592 66.667 9.30 0.00 0.00 3.18
4045 6976 2.967076 CCCGGCGATCCATCAACG 60.967 66.667 9.30 0.00 0.00 4.10
4046 6977 2.202878 CCGGCGATCCATCAACGT 60.203 61.111 9.30 0.00 0.00 3.99
4047 6978 1.813753 CCGGCGATCCATCAACGTT 60.814 57.895 9.30 0.00 0.00 3.99
4048 6979 1.348250 CGGCGATCCATCAACGTTG 59.652 57.895 22.35 22.35 0.00 4.10
4049 6980 1.358725 CGGCGATCCATCAACGTTGT 61.359 55.000 26.47 12.26 0.00 3.32
4050 6981 0.096976 GGCGATCCATCAACGTTGTG 59.903 55.000 26.47 21.68 0.00 3.33
4051 6982 1.075542 GCGATCCATCAACGTTGTGA 58.924 50.000 26.47 20.55 0.00 3.58
4052 6983 1.061131 GCGATCCATCAACGTTGTGAG 59.939 52.381 26.47 16.88 0.00 3.51
4053 6984 2.606108 CGATCCATCAACGTTGTGAGA 58.394 47.619 26.47 20.20 0.00 3.27
4054 6985 2.993220 CGATCCATCAACGTTGTGAGAA 59.007 45.455 26.47 8.62 0.00 2.87
4055 6986 3.061295 CGATCCATCAACGTTGTGAGAAG 59.939 47.826 26.47 14.99 0.00 2.85
4056 6987 2.766313 TCCATCAACGTTGTGAGAAGG 58.234 47.619 26.47 18.59 0.00 3.46
4057 6988 1.197721 CCATCAACGTTGTGAGAAGGC 59.802 52.381 26.47 0.00 0.00 4.35
4086 7017 0.326264 GGCATAGCCTAGTGATGGGG 59.674 60.000 0.00 0.00 46.69 4.96
4127 7058 0.251297 CACCCAGGTTCAAGGCATGA 60.251 55.000 0.00 0.00 35.85 3.07
4163 7094 5.167845 GGGTTTGTTGCACCAATTATACTG 58.832 41.667 0.00 0.00 35.80 2.74
4166 7097 7.363443 GGGTTTGTTGCACCAATTATACTGTAT 60.363 37.037 0.00 5.53 35.80 2.29
4170 7101 5.381184 TGCACCAATTATACTGTATGGGT 57.619 39.130 10.51 9.32 35.44 4.51
4225 7173 5.559770 TGTGAGAAGGCAAATGTTCTATGA 58.440 37.500 0.00 0.00 33.04 2.15
4232 7180 4.081476 AGGCAAATGTTCTATGAAAAGGCC 60.081 41.667 0.00 0.00 36.81 5.19
4234 7182 5.237048 GCAAATGTTCTATGAAAAGGCCAA 58.763 37.500 5.01 0.00 0.00 4.52
4314 7262 4.753610 GGTTATCCGAGCATTTAACTACCC 59.246 45.833 0.00 0.00 0.00 3.69
4492 7442 2.512692 TTTGTCCTACTGCCATGCAT 57.487 45.000 0.00 0.00 38.13 3.96
4530 7480 3.605692 CGGCGACCTCTTACGTATAGTTC 60.606 52.174 0.00 0.00 0.00 3.01
4561 7511 9.710979 TTCCTTCTTAAAATTTTCGCATATACG 57.289 29.630 6.72 0.00 0.00 3.06
4627 9277 1.955778 CAGTGGAAGTGGAATTGTGCA 59.044 47.619 0.00 0.00 32.25 4.57
4854 9881 8.761575 TTTCAAATTCCTCTGAAAATACATGC 57.238 30.769 0.00 0.00 38.32 4.06
4906 9933 9.143155 ACTTAAAATGGTTGATGTTTCTTAGGT 57.857 29.630 0.00 0.00 0.00 3.08
4907 9934 9.410556 CTTAAAATGGTTGATGTTTCTTAGGTG 57.589 33.333 0.00 0.00 0.00 4.00
4946 9973 4.900635 AAATTGATGGTCCTTCGTATGC 57.099 40.909 0.61 0.00 0.00 3.14
4965 9992 2.315011 GCGTTTTTCACATTCGCATCA 58.685 42.857 0.00 0.00 45.01 3.07
4977 10139 7.909267 TCACATTCGCATCATAAAAACTAGAG 58.091 34.615 0.00 0.00 0.00 2.43
5013 10175 1.314730 AACACACGCCAAACCCTAAG 58.685 50.000 0.00 0.00 0.00 2.18
5065 10227 4.829064 TTCCATGCTGAAAGTTGTGTAC 57.171 40.909 0.00 0.00 35.30 2.90
5079 10241 6.605471 AGTTGTGTACTATTGAGGATCACA 57.395 37.500 0.00 0.00 39.56 3.58
5118 10280 4.458397 CTGAAGCATGACATGGAATAGGT 58.542 43.478 17.03 0.00 0.00 3.08
5119 10281 4.858850 TGAAGCATGACATGGAATAGGTT 58.141 39.130 17.03 1.70 0.00 3.50
5126 10288 4.850680 TGACATGGAATAGGTTGGGTAAC 58.149 43.478 0.00 0.00 36.04 2.50
5127 10289 4.289934 TGACATGGAATAGGTTGGGTAACA 59.710 41.667 0.00 0.00 38.58 2.41
5275 10600 6.094881 GCATGCCTTGGTACTTTTCTTACATA 59.905 38.462 6.36 0.00 0.00 2.29
5281 10606 8.311836 CCTTGGTACTTTTCTTACATAGACTCA 58.688 37.037 0.00 0.00 30.90 3.41
5282 10607 9.877178 CTTGGTACTTTTCTTACATAGACTCAT 57.123 33.333 0.00 0.00 30.90 2.90
5315 10640 8.611757 CACATTAAGTGTCGATTTGATCCATTA 58.388 33.333 0.00 0.00 43.40 1.90
5321 10646 6.703607 AGTGTCGATTTGATCCATTATGAGTC 59.296 38.462 0.00 0.00 0.00 3.36
5356 10681 9.695526 CACCTCATGTTGAAATTTATGAAAGAA 57.304 29.630 3.61 0.00 0.00 2.52
5375 10700 4.016444 AGAATTTCTCCTGGCGCATAAAA 58.984 39.130 10.83 0.75 0.00 1.52
5410 10744 1.561769 ATTGGTGATGCCCTCCGACA 61.562 55.000 0.00 0.00 36.04 4.35
5445 10779 3.738982 ACAACAGACGGACATCATCAAA 58.261 40.909 0.00 0.00 0.00 2.69
5447 10781 5.487433 ACAACAGACGGACATCATCAAATA 58.513 37.500 0.00 0.00 0.00 1.40
5473 10809 0.817229 GCTTCACTATGGGAGCAGGC 60.817 60.000 0.00 0.00 0.00 4.85
5509 10847 7.178983 TGGATGCCACTCAAATTTTCTAAGATT 59.821 33.333 0.00 0.00 0.00 2.40
5510 10848 8.037166 GGATGCCACTCAAATTTTCTAAGATTT 58.963 33.333 0.00 0.00 0.00 2.17
5511 10849 9.428097 GATGCCACTCAAATTTTCTAAGATTTT 57.572 29.630 0.00 0.00 0.00 1.82
5524 10862 8.773404 TTTCTAAGATTTTCCTCGTCTTTAGG 57.227 34.615 0.00 0.00 34.33 2.69
5529 10867 6.350103 AGATTTTCCTCGTCTTTAGGATTCC 58.650 40.000 0.00 0.00 42.69 3.01
5530 10868 3.795623 TTCCTCGTCTTTAGGATTCCG 57.204 47.619 0.00 0.00 42.69 4.30
5547 10885 3.712016 TCCGGATGATCCTTTTGTTGA 57.288 42.857 10.18 0.00 33.30 3.18
5630 10971 5.337491 GCCTTTGCTTCCATTTCCTTGATTA 60.337 40.000 0.00 0.00 33.53 1.75
5637 10978 4.671831 TCCATTTCCTTGATTAAGTGCCA 58.328 39.130 0.00 0.00 31.80 4.92
5669 11010 2.385013 TGTCCAACACGAGGATGATG 57.615 50.000 0.00 0.00 37.52 3.07
5710 11051 2.338577 AATGGCGATCAAGAAGAGGG 57.661 50.000 0.00 0.00 0.00 4.30
5726 11067 1.529244 GGGATAGGTGCATGGTGGC 60.529 63.158 0.00 0.00 0.00 5.01
5806 11149 0.901114 TGGCGTGGAGGCTAACAGTA 60.901 55.000 0.00 0.00 46.88 2.74
5811 11154 3.439129 GCGTGGAGGCTAACAGTAAAAAT 59.561 43.478 0.00 0.00 0.00 1.82
5812 11155 4.436986 GCGTGGAGGCTAACAGTAAAAATC 60.437 45.833 0.00 0.00 0.00 2.17
5813 11156 4.693566 CGTGGAGGCTAACAGTAAAAATCA 59.306 41.667 0.00 0.00 0.00 2.57
5814 11157 5.163854 CGTGGAGGCTAACAGTAAAAATCAG 60.164 44.000 0.00 0.00 0.00 2.90
5837 11180 2.159379 GGGGTTAGCTTGAAAATCTGCG 60.159 50.000 0.00 0.00 0.00 5.18
5858 11201 3.502595 CGAGAGATTAGTGCGGATAAGGA 59.497 47.826 0.00 0.00 0.00 3.36
5877 11220 6.859112 AAGGACACATACATCTGTAAGTCT 57.141 37.500 14.79 0.00 34.37 3.24
5879 11222 7.956328 AGGACACATACATCTGTAAGTCTAA 57.044 36.000 14.79 0.00 34.37 2.10
5880 11223 8.540507 AGGACACATACATCTGTAAGTCTAAT 57.459 34.615 14.79 5.41 34.37 1.73
5911 11254 9.477484 AGCAATACAACCTATAAATCTAGAACG 57.523 33.333 0.00 0.00 0.00 3.95
5929 11272 0.663568 CGTTCGAGCTGACCGAGTTT 60.664 55.000 0.00 0.00 33.85 2.66
5963 11307 2.412870 CTCTGACATACGCAACCACAA 58.587 47.619 0.00 0.00 0.00 3.33
6307 11766 2.363680 CTCTCTCTCTCTCTCTCTCGCT 59.636 54.545 0.00 0.00 0.00 4.93
6308 11767 2.766263 TCTCTCTCTCTCTCTCTCGCTT 59.234 50.000 0.00 0.00 0.00 4.68
6309 11768 3.197766 TCTCTCTCTCTCTCTCTCGCTTT 59.802 47.826 0.00 0.00 0.00 3.51
6310 11769 3.531538 TCTCTCTCTCTCTCTCGCTTTC 58.468 50.000 0.00 0.00 0.00 2.62
6311 11770 3.197766 TCTCTCTCTCTCTCTCGCTTTCT 59.802 47.826 0.00 0.00 0.00 2.52
6312 11771 3.531538 TCTCTCTCTCTCTCGCTTTCTC 58.468 50.000 0.00 0.00 0.00 2.87
6313 11772 3.197766 TCTCTCTCTCTCTCGCTTTCTCT 59.802 47.826 0.00 0.00 0.00 3.10
6314 11773 3.531538 TCTCTCTCTCTCGCTTTCTCTC 58.468 50.000 0.00 0.00 0.00 3.20
6315 11774 3.055458 TCTCTCTCTCTCGCTTTCTCTCA 60.055 47.826 0.00 0.00 0.00 3.27
6316 11775 3.006940 TCTCTCTCTCGCTTTCTCTCAC 58.993 50.000 0.00 0.00 0.00 3.51
6317 11776 3.009723 CTCTCTCTCGCTTTCTCTCACT 58.990 50.000 0.00 0.00 0.00 3.41
6318 11777 3.006940 TCTCTCTCGCTTTCTCTCACTC 58.993 50.000 0.00 0.00 0.00 3.51
6399 11858 6.323739 TCAGAGGTATGCATGTGTAGTTATCA 59.676 38.462 10.16 0.00 0.00 2.15
6515 11981 6.584185 ATTATAAGTTTGCTCCCAAAACGT 57.416 33.333 0.00 0.00 42.19 3.99
7127 12664 4.882842 ACAAAACACAGGGACTTTTGTT 57.117 36.364 0.00 0.00 42.65 2.83
7175 12714 3.049708 ACTTAAAACAGGACTACGGGC 57.950 47.619 0.00 0.00 0.00 6.13
7192 12731 5.041191 ACGGGCTGAATTCTCTGAAATAT 57.959 39.130 7.05 0.00 0.00 1.28
7195 12734 6.042093 ACGGGCTGAATTCTCTGAAATATAGA 59.958 38.462 7.05 0.00 0.00 1.98
7197 12736 6.878389 GGGCTGAATTCTCTGAAATATAGAGG 59.122 42.308 7.05 0.00 41.54 3.69
7224 12763 1.543802 TGAAAAATGCCATGACGGACC 59.456 47.619 0.00 0.00 36.56 4.46
7240 12779 4.216708 ACGGACCAAAGAAACCCAATTTA 58.783 39.130 0.00 0.00 0.00 1.40
7282 12821 2.615227 ATCTTCACAGCCATCGCCCC 62.615 60.000 0.00 0.00 34.57 5.80
7283 12822 4.424711 TTCACAGCCATCGCCCCC 62.425 66.667 0.00 0.00 34.57 5.40
7296 12835 1.319614 CGCCCCCGTCCATGAAAATT 61.320 55.000 0.00 0.00 0.00 1.82
7316 12855 6.973229 AATTGGTTAGATTTTCTTGCATGC 57.027 33.333 11.82 11.82 0.00 4.06
7374 12913 9.745018 AATGAAAGAATCCTTATGAGAGTCAAA 57.255 29.630 0.00 0.00 30.90 2.69
7381 12920 8.443953 AATCCTTATGAGAGTCAAATACAAGC 57.556 34.615 0.00 0.00 0.00 4.01
7410 12949 6.854381 GGTTGTCCTTTAAAGTAACAATCACG 59.146 38.462 24.83 6.72 34.05 4.35
7479 13018 7.276438 TCGTGTAGAGATGACAATGAAAGAATG 59.724 37.037 0.00 0.00 0.00 2.67
7582 13122 9.874215 AGTGAGTAAATTTTAGTTAGAAAACGC 57.126 29.630 0.00 0.00 40.73 4.84
7597 13137 2.279582 AACGCGTGACTAAGAGATGG 57.720 50.000 14.98 0.00 0.00 3.51
7643 13183 1.831580 GCATGTTTTGCCTCCTCTCT 58.168 50.000 0.00 0.00 46.15 3.10
7709 13253 1.178276 GTGTGTGGTGGTTTGGAACA 58.822 50.000 0.00 0.00 0.00 3.18
7837 13381 9.936759 AATAGTTCTGAAAGGTTTGTTCAAAAA 57.063 25.926 0.00 0.00 34.68 1.94
7922 13466 8.556213 AGAAGACCTAAGTTATCTATCTAGCG 57.444 38.462 0.00 0.00 0.00 4.26
7980 13524 5.479027 ACTGGTGGTTCAAAACTTAAGTGTT 59.521 36.000 9.34 7.10 0.00 3.32
8073 13618 1.227497 CAAGCAGATCGAGAGGGCC 60.227 63.158 0.00 0.00 0.00 5.80
8094 13639 4.633547 ACCGACCCTAGGTGTGTT 57.366 55.556 8.29 0.00 41.10 3.32
8197 13742 1.075970 TCCTCCTCTGATCCCGTGG 60.076 63.158 0.00 0.00 0.00 4.94
8216 13761 1.671054 CATCCGCAGTGAACCCGTT 60.671 57.895 0.00 0.00 0.00 4.44
8267 13812 4.468765 TTCATCAGCTGAAAGAGGAGAG 57.531 45.455 22.50 2.70 40.92 3.20
8502 14048 8.528917 TGAGATATACATTTGTATGTTACGCC 57.471 34.615 12.41 0.00 42.29 5.68
8544 14090 3.719268 TGGTTATCCTCACTGTTGCAT 57.281 42.857 0.00 0.00 34.23 3.96
8631 14184 5.183228 GGTTCTATTCTCGTCCATTTTCCA 58.817 41.667 0.00 0.00 0.00 3.53
8634 14187 4.816385 TCTATTCTCGTCCATTTTCCATGC 59.184 41.667 0.00 0.00 0.00 4.06
8648 14201 7.498900 CCATTTTCCATGCACTACTACTATTGA 59.501 37.037 0.00 0.00 0.00 2.57
8737 14290 0.953960 ATTTCTGACGGCCGAACACC 60.954 55.000 35.90 15.09 0.00 4.16
8738 14291 2.035237 TTTCTGACGGCCGAACACCT 62.035 55.000 35.90 8.10 0.00 4.00
8778 14333 5.620206 ACTACAATGATGTTGTGTTCTCCA 58.380 37.500 3.83 0.00 42.61 3.86
8828 14383 7.484959 GTGTACCAATAATTGCTTGCTTAGTTC 59.515 37.037 0.00 0.00 0.00 3.01
8955 14510 2.254546 TGTTCGCCTTTCATGAGTGT 57.745 45.000 0.00 0.00 0.00 3.55
8961 14516 1.068748 GCCTTTCATGAGTGTGCACAG 60.069 52.381 22.40 8.38 0.00 3.66
8974 14529 6.714810 TGAGTGTGCACAGGAAATAAACTAAT 59.285 34.615 22.40 0.00 0.00 1.73
8977 14532 8.730680 AGTGTGCACAGGAAATAAACTAATTAG 58.269 33.333 22.40 11.05 0.00 1.73
9074 14629 2.905736 TGGAACACTGATGGAGTCATGA 59.094 45.455 0.00 0.00 35.97 3.07
9085 14640 7.043961 TGATGGAGTCATGAGTAATCTACAC 57.956 40.000 19.26 7.31 32.98 2.90
9107 14667 5.345741 CACAAAATAAAGTTCGCCATTCCAG 59.654 40.000 0.00 0.00 0.00 3.86
9135 14695 3.988379 TGCTTCTTTTAGTGCTTGGTG 57.012 42.857 0.00 0.00 0.00 4.17
9195 14755 9.206870 CAAGCAATACACAAATTAAGTCCAAAT 57.793 29.630 0.00 0.00 0.00 2.32
9204 14764 7.167968 CACAAATTAAGTCCAAATGTGTCAGTG 59.832 37.037 0.00 0.00 33.44 3.66
9251 14811 5.715439 AGTGGTTGAGGAAATCATATGGA 57.285 39.130 2.13 0.00 37.89 3.41
9252 14812 6.078456 AGTGGTTGAGGAAATCATATGGAA 57.922 37.500 2.13 0.00 37.89 3.53
9254 14814 7.128077 AGTGGTTGAGGAAATCATATGGAAAT 58.872 34.615 2.13 0.00 37.89 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.104043 TGGAATTCAAGCTCCTGATTTTATG 57.896 36.000 7.93 0.00 32.51 1.90
81 82 4.759693 AGTTTCTTCAATTCATACCACGCA 59.240 37.500 0.00 0.00 0.00 5.24
83 84 6.073276 TGTGAGTTTCTTCAATTCATACCACG 60.073 38.462 0.00 0.00 33.94 4.94
198 199 5.004922 AGAACGAAAACAAAATGGAAGCA 57.995 34.783 0.00 0.00 0.00 3.91
199 200 5.518487 TGAAGAACGAAAACAAAATGGAAGC 59.482 36.000 0.00 0.00 0.00 3.86
215 218 8.122952 GTCCCTGTTCATTATAATTGAAGAACG 58.877 37.037 15.89 12.24 38.46 3.95
216 219 9.178758 AGTCCCTGTTCATTATAATTGAAGAAC 57.821 33.333 14.84 14.84 36.73 3.01
219 222 8.616076 GTCAGTCCCTGTTCATTATAATTGAAG 58.384 37.037 0.00 0.00 32.61 3.02
221 224 7.629157 TGTCAGTCCCTGTTCATTATAATTGA 58.371 34.615 0.00 0.00 32.61 2.57
222 225 7.467811 GCTGTCAGTCCCTGTTCATTATAATTG 60.468 40.741 0.93 0.00 32.61 2.32
224 227 6.058183 GCTGTCAGTCCCTGTTCATTATAAT 58.942 40.000 0.93 0.00 32.61 1.28
241 246 7.389053 AGTTTTTAATCACCTTCTAGCTGTCAG 59.611 37.037 0.00 0.00 0.00 3.51
242 247 7.224297 AGTTTTTAATCACCTTCTAGCTGTCA 58.776 34.615 0.00 0.00 0.00 3.58
243 248 7.674471 AGTTTTTAATCACCTTCTAGCTGTC 57.326 36.000 0.00 0.00 0.00 3.51
244 249 7.824779 CCTAGTTTTTAATCACCTTCTAGCTGT 59.175 37.037 0.00 0.00 0.00 4.40
245 250 8.041323 TCCTAGTTTTTAATCACCTTCTAGCTG 58.959 37.037 0.00 0.00 0.00 4.24
246 251 8.041919 GTCCTAGTTTTTAATCACCTTCTAGCT 58.958 37.037 0.00 0.00 0.00 3.32
247 252 8.041919 AGTCCTAGTTTTTAATCACCTTCTAGC 58.958 37.037 0.00 0.00 0.00 3.42
248 253 9.589111 GAGTCCTAGTTTTTAATCACCTTCTAG 57.411 37.037 0.00 0.00 0.00 2.43
249 254 9.096823 TGAGTCCTAGTTTTTAATCACCTTCTA 57.903 33.333 0.00 0.00 0.00 2.10
250 255 7.974504 TGAGTCCTAGTTTTTAATCACCTTCT 58.025 34.615 0.00 0.00 0.00 2.85
251 256 8.794335 ATGAGTCCTAGTTTTTAATCACCTTC 57.206 34.615 0.00 0.00 0.00 3.46
253 258 9.838339 CATATGAGTCCTAGTTTTTAATCACCT 57.162 33.333 0.00 0.00 0.00 4.00
254 259 9.057089 CCATATGAGTCCTAGTTTTTAATCACC 57.943 37.037 3.65 0.00 0.00 4.02
255 260 9.832445 TCCATATGAGTCCTAGTTTTTAATCAC 57.168 33.333 3.65 0.00 0.00 3.06
419 427 1.198408 GGGTACTTTGCAGCCGTTAAC 59.802 52.381 0.00 0.00 0.00 2.01
421 429 0.688487 AGGGTACTTTGCAGCCGTTA 59.312 50.000 0.00 0.00 38.62 3.18
423 431 1.003718 GAGGGTACTTTGCAGCCGT 60.004 57.895 0.00 0.00 38.62 5.68
424 432 2.100631 CGAGGGTACTTTGCAGCCG 61.101 63.158 0.00 0.00 38.62 5.52
426 434 2.399356 GCCGAGGGTACTTTGCAGC 61.399 63.158 0.00 0.00 0.00 5.25
427 435 1.745489 GGCCGAGGGTACTTTGCAG 60.745 63.158 0.00 0.00 0.00 4.41
428 436 2.349755 GGCCGAGGGTACTTTGCA 59.650 61.111 0.00 0.00 0.00 4.08
429 437 1.745489 CTGGCCGAGGGTACTTTGC 60.745 63.158 0.00 0.00 0.00 3.68
430 438 1.745489 GCTGGCCGAGGGTACTTTG 60.745 63.158 0.00 0.00 0.00 2.77
433 441 3.077556 CTGCTGGCCGAGGGTACT 61.078 66.667 0.00 0.00 0.00 2.73
434 442 4.840005 GCTGCTGGCCGAGGGTAC 62.840 72.222 0.00 0.00 34.27 3.34
439 447 3.315142 TACCAAGCTGCTGGCCGAG 62.315 63.158 1.35 0.00 40.45 4.63
441 449 2.821366 CTACCAAGCTGCTGGCCG 60.821 66.667 1.35 0.00 40.45 6.13
442 450 1.451028 CTCTACCAAGCTGCTGGCC 60.451 63.158 1.35 0.00 40.45 5.36
456 464 8.736097 TCTACCAATAATATTTCAGGCCTCTA 57.264 34.615 0.00 0.00 0.00 2.43
512 520 7.992008 AGATAACCAAGTTCTCGTTTCAAAAA 58.008 30.769 0.00 0.00 0.00 1.94
513 521 7.562454 AGATAACCAAGTTCTCGTTTCAAAA 57.438 32.000 0.00 0.00 0.00 2.44
514 522 7.562454 AAGATAACCAAGTTCTCGTTTCAAA 57.438 32.000 0.00 0.00 0.00 2.69
515 523 7.562454 AAAGATAACCAAGTTCTCGTTTCAA 57.438 32.000 0.00 0.00 0.00 2.69
516 524 7.281324 TCAAAAGATAACCAAGTTCTCGTTTCA 59.719 33.333 4.61 0.00 32.06 2.69
517 525 7.636326 TCAAAAGATAACCAAGTTCTCGTTTC 58.364 34.615 4.61 0.00 32.06 2.78
518 526 7.562454 TCAAAAGATAACCAAGTTCTCGTTT 57.438 32.000 2.54 2.54 33.54 3.60
519 527 7.745620 ATCAAAAGATAACCAAGTTCTCGTT 57.254 32.000 0.00 0.00 0.00 3.85
520 528 7.444183 TGAATCAAAAGATAACCAAGTTCTCGT 59.556 33.333 0.00 0.00 0.00 4.18
521 529 7.806690 TGAATCAAAAGATAACCAAGTTCTCG 58.193 34.615 0.00 0.00 0.00 4.04
522 530 9.617975 CTTGAATCAAAAGATAACCAAGTTCTC 57.382 33.333 0.00 0.00 0.00 2.87
523 531 8.579863 CCTTGAATCAAAAGATAACCAAGTTCT 58.420 33.333 0.00 0.00 0.00 3.01
524 532 8.576442 TCCTTGAATCAAAAGATAACCAAGTTC 58.424 33.333 0.00 0.00 0.00 3.01
525 533 8.360390 GTCCTTGAATCAAAAGATAACCAAGTT 58.640 33.333 0.00 0.00 0.00 2.66
526 534 7.725844 AGTCCTTGAATCAAAAGATAACCAAGT 59.274 33.333 0.00 0.00 0.00 3.16
527 535 8.115490 AGTCCTTGAATCAAAAGATAACCAAG 57.885 34.615 0.00 0.00 0.00 3.61
528 536 7.094805 CGAGTCCTTGAATCAAAAGATAACCAA 60.095 37.037 0.00 0.00 0.00 3.67
529 537 6.371548 CGAGTCCTTGAATCAAAAGATAACCA 59.628 38.462 0.00 0.00 0.00 3.67
540 548 3.611766 CGTCAGTTCGAGTCCTTGAATCA 60.612 47.826 0.48 0.00 35.61 2.57
553 561 2.338620 TGACCCTGCGTCAGTTCG 59.661 61.111 6.19 0.00 46.80 3.95
584 592 2.116125 AAACCTGGCTGTGGAGGC 59.884 61.111 0.00 0.00 45.19 4.70
586 594 4.085876 CCAAACCTGGCTGTGGAG 57.914 61.111 5.21 0.00 35.39 3.86
654 662 5.519927 GGGCATTATCAAAATCAAAACGGAG 59.480 40.000 0.00 0.00 0.00 4.63
656 664 4.570369 GGGGCATTATCAAAATCAAAACGG 59.430 41.667 0.00 0.00 0.00 4.44
657 665 5.418676 AGGGGCATTATCAAAATCAAAACG 58.581 37.500 0.00 0.00 0.00 3.60
659 667 5.486775 TGGAGGGGCATTATCAAAATCAAAA 59.513 36.000 0.00 0.00 0.00 2.44
660 668 5.028802 TGGAGGGGCATTATCAAAATCAAA 58.971 37.500 0.00 0.00 0.00 2.69
661 669 4.618635 TGGAGGGGCATTATCAAAATCAA 58.381 39.130 0.00 0.00 0.00 2.57
662 670 4.262891 TGGAGGGGCATTATCAAAATCA 57.737 40.909 0.00 0.00 0.00 2.57
663 671 4.834496 TCATGGAGGGGCATTATCAAAATC 59.166 41.667 0.00 0.00 0.00 2.17
664 672 4.590222 GTCATGGAGGGGCATTATCAAAAT 59.410 41.667 0.00 0.00 0.00 1.82
687 906 7.009815 AGCATCAAACATTTGCGATTCTAATTG 59.990 33.333 0.00 0.00 41.22 2.32
698 917 3.482923 CGCATCAAGCATCAAACATTTGC 60.483 43.478 0.00 0.00 46.13 3.68
707 926 0.178767 ACTAGCCGCATCAAGCATCA 59.821 50.000 0.00 0.00 46.13 3.07
710 929 0.321564 ACAACTAGCCGCATCAAGCA 60.322 50.000 0.00 0.00 46.13 3.91
712 931 2.860735 GTCTACAACTAGCCGCATCAAG 59.139 50.000 0.00 0.00 0.00 3.02
743 990 5.475220 TCGAAAATTTGCTAAGTGGATCCAA 59.525 36.000 18.20 0.00 0.00 3.53
744 991 5.007034 TCGAAAATTTGCTAAGTGGATCCA 58.993 37.500 11.44 11.44 0.00 3.41
765 1012 2.223971 ACGGTGGTGGCTAATTATCTCG 60.224 50.000 0.00 0.00 0.00 4.04
770 1017 3.756933 GGATACGGTGGTGGCTAATTA 57.243 47.619 0.00 0.00 0.00 1.40
818 1066 2.004733 GAGCCGTGCCGTTAACTATTT 58.995 47.619 3.71 0.00 0.00 1.40
819 1067 1.066716 TGAGCCGTGCCGTTAACTATT 60.067 47.619 3.71 0.00 0.00 1.73
840 1088 1.023513 GCCTCCAAGCTAGCTGTGTG 61.024 60.000 20.16 13.06 0.00 3.82
841 1089 1.298014 GCCTCCAAGCTAGCTGTGT 59.702 57.895 20.16 0.00 0.00 3.72
849 1097 0.980231 CTACTCCCTGCCTCCAAGCT 60.980 60.000 0.00 0.00 0.00 3.74
851 1099 0.827368 GACTACTCCCTGCCTCCAAG 59.173 60.000 0.00 0.00 0.00 3.61
852 1100 0.413832 AGACTACTCCCTGCCTCCAA 59.586 55.000 0.00 0.00 0.00 3.53
863 1111 2.025699 ACCTGGAGAGTGGAGACTACTC 60.026 54.545 0.00 7.08 43.77 2.59
864 1112 1.997040 ACCTGGAGAGTGGAGACTACT 59.003 52.381 0.00 0.00 30.16 2.57
865 1113 2.096248 CACCTGGAGAGTGGAGACTAC 58.904 57.143 0.00 0.00 30.16 2.73
866 1114 1.711375 ACACCTGGAGAGTGGAGACTA 59.289 52.381 0.00 0.00 39.63 2.59
867 1115 0.485099 ACACCTGGAGAGTGGAGACT 59.515 55.000 0.00 0.00 39.63 3.24
901 1152 1.207089 CGACCAGCTGAGGGAAATACA 59.793 52.381 17.39 0.00 0.00 2.29
902 1153 1.473434 CCGACCAGCTGAGGGAAATAC 60.473 57.143 17.39 0.00 0.00 1.89
904 1155 1.201429 ACCGACCAGCTGAGGGAAAT 61.201 55.000 17.39 0.00 0.00 2.17
905 1156 1.827399 GACCGACCAGCTGAGGGAAA 61.827 60.000 17.39 0.00 0.00 3.13
906 1157 2.203788 ACCGACCAGCTGAGGGAA 60.204 61.111 17.39 0.00 0.00 3.97
908 1159 4.135153 CGACCGACCAGCTGAGGG 62.135 72.222 17.39 15.23 0.00 4.30
910 1161 4.803426 GCCGACCGACCAGCTGAG 62.803 72.222 17.39 8.04 0.00 3.35
941 1192 1.545706 AAGGAGGGAGAAGACCGTGC 61.546 60.000 0.00 0.00 36.63 5.34
943 1194 0.178929 ACAAGGAGGGAGAAGACCGT 60.179 55.000 0.00 0.00 0.00 4.83
945 1196 1.832366 GGTACAAGGAGGGAGAAGACC 59.168 57.143 0.00 0.00 0.00 3.85
947 1198 1.356738 TCGGTACAAGGAGGGAGAAGA 59.643 52.381 0.00 0.00 0.00 2.87
948 1199 1.751924 CTCGGTACAAGGAGGGAGAAG 59.248 57.143 0.00 0.00 0.00 2.85
949 1200 1.356738 TCTCGGTACAAGGAGGGAGAA 59.643 52.381 0.00 0.00 0.00 2.87
951 1202 1.751924 CTTCTCGGTACAAGGAGGGAG 59.248 57.143 0.00 0.00 0.00 4.30
952 1203 1.848652 CTTCTCGGTACAAGGAGGGA 58.151 55.000 0.00 0.00 0.00 4.20
953 1204 0.175989 GCTTCTCGGTACAAGGAGGG 59.824 60.000 0.00 0.00 0.00 4.30
958 1213 1.354040 CTGCTGCTTCTCGGTACAAG 58.646 55.000 0.00 0.00 0.00 3.16
1111 1379 2.371179 CCATGTAGGATGATCCAGCAGT 59.629 50.000 14.90 0.00 39.61 4.40
1112 1380 2.874861 GCCATGTAGGATGATCCAGCAG 60.875 54.545 14.90 2.77 39.61 4.24
1113 1381 1.072806 GCCATGTAGGATGATCCAGCA 59.927 52.381 14.90 11.94 39.61 4.41
1114 1382 1.818642 GCCATGTAGGATGATCCAGC 58.181 55.000 14.90 6.31 39.61 4.85
1204 1472 0.976073 AGATTGATCGTCGGTGGGGT 60.976 55.000 0.00 0.00 0.00 4.95
1209 1477 1.405821 GGAGTGAGATTGATCGTCGGT 59.594 52.381 0.00 0.00 0.00 4.69
1295 1577 6.438763 GTTTCACACAAAACCCTCTCTATTG 58.561 40.000 0.00 0.00 33.86 1.90
1365 1671 3.987220 CAGCAAGGATAAAACAAAACCCG 59.013 43.478 0.00 0.00 0.00 5.28
1414 1720 3.921021 CGACCAAAGACTAGCAACAGTAG 59.079 47.826 0.00 0.00 0.00 2.57
1424 1730 3.437213 TGGAATCCTCGACCAAAGACTA 58.563 45.455 0.00 0.00 0.00 2.59
1433 1739 2.808543 GGCATGTAATGGAATCCTCGAC 59.191 50.000 0.00 0.00 46.86 4.20
1440 1746 1.575304 ACCCAGGGCATGTAATGGAAT 59.425 47.619 4.91 0.41 46.86 3.01
1446 1752 2.506644 GGTAGTAACCCAGGGCATGTAA 59.493 50.000 4.91 0.00 40.21 2.41
1459 1765 8.421784 TGTCATTCATTCTATGGAGGTAGTAAC 58.578 37.037 0.00 0.00 0.00 2.50
1466 1772 9.217278 CTAAGATTGTCATTCATTCTATGGAGG 57.783 37.037 0.00 0.00 36.24 4.30
1484 1790 7.988737 TGGATCTTGTATTTGCACTAAGATTG 58.011 34.615 9.86 0.00 37.99 2.67
1501 1807 5.990120 AAAAGGACCTGAAATGGATCTTG 57.010 39.130 0.00 0.00 0.00 3.02
1525 1831 4.619863 CGGTAAATCTCGTTCCCAGAAAGA 60.620 45.833 0.00 0.00 0.00 2.52
1526 1832 3.617263 CGGTAAATCTCGTTCCCAGAAAG 59.383 47.826 0.00 0.00 0.00 2.62
1527 1833 3.007182 ACGGTAAATCTCGTTCCCAGAAA 59.993 43.478 0.00 0.00 36.04 2.52
1528 1834 2.564062 ACGGTAAATCTCGTTCCCAGAA 59.436 45.455 0.00 0.00 36.04 3.02
1529 1835 2.173519 ACGGTAAATCTCGTTCCCAGA 58.826 47.619 0.00 0.00 36.04 3.86
1530 1836 2.667473 ACGGTAAATCTCGTTCCCAG 57.333 50.000 0.00 0.00 36.04 4.45
1531 1837 2.159198 GCTACGGTAAATCTCGTTCCCA 60.159 50.000 0.00 0.00 40.31 4.37
1532 1838 2.467838 GCTACGGTAAATCTCGTTCCC 58.532 52.381 0.00 0.00 40.31 3.97
1533 1839 2.114825 CGCTACGGTAAATCTCGTTCC 58.885 52.381 0.00 0.00 40.31 3.62
1534 1840 2.790387 ACGCTACGGTAAATCTCGTTC 58.210 47.619 0.00 0.00 40.31 3.95
1535 1841 2.927553 ACGCTACGGTAAATCTCGTT 57.072 45.000 0.00 0.00 40.31 3.85
1536 1842 2.927553 AACGCTACGGTAAATCTCGT 57.072 45.000 0.00 0.00 42.55 4.18
1537 1843 4.795278 AGTTAAACGCTACGGTAAATCTCG 59.205 41.667 0.00 0.00 0.00 4.04
1538 1844 5.499812 GCAGTTAAACGCTACGGTAAATCTC 60.500 44.000 0.00 0.00 0.00 2.75
1539 1845 4.328169 GCAGTTAAACGCTACGGTAAATCT 59.672 41.667 0.00 0.00 0.00 2.40
1540 1846 4.091800 TGCAGTTAAACGCTACGGTAAATC 59.908 41.667 0.00 0.00 0.00 2.17
1541 1847 3.995705 TGCAGTTAAACGCTACGGTAAAT 59.004 39.130 0.00 0.00 0.00 1.40
1542 1848 3.388308 TGCAGTTAAACGCTACGGTAAA 58.612 40.909 0.00 0.00 0.00 2.01
1543 1849 3.023946 TGCAGTTAAACGCTACGGTAA 57.976 42.857 0.00 0.00 0.00 2.85
1544 1850 2.721274 TGCAGTTAAACGCTACGGTA 57.279 45.000 0.00 0.00 0.00 4.02
1545 1851 1.997606 GATGCAGTTAAACGCTACGGT 59.002 47.619 0.00 0.00 0.00 4.83
1546 1852 2.268298 AGATGCAGTTAAACGCTACGG 58.732 47.619 0.00 0.00 0.00 4.02
1547 1853 3.612860 AGAAGATGCAGTTAAACGCTACG 59.387 43.478 0.00 0.00 0.00 3.51
1548 1854 4.865365 AGAGAAGATGCAGTTAAACGCTAC 59.135 41.667 0.00 0.00 0.00 3.58
1549 1855 4.864806 CAGAGAAGATGCAGTTAAACGCTA 59.135 41.667 0.00 0.00 0.00 4.26
1550 1856 3.681897 CAGAGAAGATGCAGTTAAACGCT 59.318 43.478 0.00 0.00 0.00 5.07
1551 1857 3.181516 CCAGAGAAGATGCAGTTAAACGC 60.182 47.826 0.00 0.00 0.00 4.84
1552 1858 3.181516 GCCAGAGAAGATGCAGTTAAACG 60.182 47.826 0.00 0.00 0.00 3.60
1553 1859 4.006319 AGCCAGAGAAGATGCAGTTAAAC 58.994 43.478 0.00 0.00 0.00 2.01
1554 1860 4.292186 AGCCAGAGAAGATGCAGTTAAA 57.708 40.909 0.00 0.00 0.00 1.52
1555 1861 3.988976 AGCCAGAGAAGATGCAGTTAA 57.011 42.857 0.00 0.00 0.00 2.01
1556 1862 6.731292 TTATAGCCAGAGAAGATGCAGTTA 57.269 37.500 0.00 0.00 0.00 2.24
1557 1863 5.620738 TTATAGCCAGAGAAGATGCAGTT 57.379 39.130 0.00 0.00 0.00 3.16
1558 1864 5.306419 TCATTATAGCCAGAGAAGATGCAGT 59.694 40.000 0.00 0.00 0.00 4.40
1559 1865 5.791666 TCATTATAGCCAGAGAAGATGCAG 58.208 41.667 0.00 0.00 0.00 4.41
1560 1866 5.813513 TCATTATAGCCAGAGAAGATGCA 57.186 39.130 0.00 0.00 0.00 3.96
1561 1867 6.404708 TGATCATTATAGCCAGAGAAGATGC 58.595 40.000 0.00 0.00 0.00 3.91
1646 1990 5.278266 CGAAAAGGGTGCAGTTTTATCTCAA 60.278 40.000 0.00 0.00 0.00 3.02
1670 2014 2.805845 CATAGTTTGCCTGCATGAAGC 58.194 47.619 0.00 0.00 45.96 3.86
1723 2073 0.247736 GGTGAGACGAAGGATGCAGT 59.752 55.000 0.00 0.00 0.00 4.40
1779 2129 0.450983 CCTGGAAGTAGGACGACGAC 59.549 60.000 0.00 0.00 40.42 4.34
1780 2130 1.310933 GCCTGGAAGTAGGACGACGA 61.311 60.000 0.00 0.00 40.42 4.20
1781 2131 1.139095 GCCTGGAAGTAGGACGACG 59.861 63.158 0.00 0.00 40.42 5.12
2142 2501 2.281900 GTGTGCCGGCCCTTGTAA 60.282 61.111 26.77 0.00 0.00 2.41
2223 2591 4.193334 TCCTGATGAGCGCCGACG 62.193 66.667 2.29 0.00 44.07 5.12
2224 2592 2.279120 CTCCTGATGAGCGCCGAC 60.279 66.667 2.29 0.00 33.47 4.79
2225 2593 3.531207 CCTCCTGATGAGCGCCGA 61.531 66.667 2.29 0.00 39.98 5.54
2226 2594 3.531207 TCCTCCTGATGAGCGCCG 61.531 66.667 2.29 0.00 39.98 6.46
2227 2595 2.107953 GTCCTCCTGATGAGCGCC 59.892 66.667 2.29 0.00 39.98 6.53
2228 2596 2.279120 CGTCCTCCTGATGAGCGC 60.279 66.667 0.00 0.00 39.98 5.92
2229 2597 3.514417 TCGTCCTCCTGATGAGCG 58.486 61.111 0.00 0.00 39.98 5.03
2339 2713 9.657419 AAGTTTCATTGACTGAAGAACAAAATT 57.343 25.926 0.00 0.00 44.48 1.82
2634 3011 4.529897 AGATGCATGGTTGAAAGCAGATA 58.470 39.130 2.46 0.00 40.71 1.98
2757 3138 6.601613 CAGTGGGAGTAGATAGATGGATAGAC 59.398 46.154 0.00 0.00 0.00 2.59
2764 3145 3.829601 GGGACAGTGGGAGTAGATAGATG 59.170 52.174 0.00 0.00 0.00 2.90
2766 3147 2.177233 GGGGACAGTGGGAGTAGATAGA 59.823 54.545 0.00 0.00 0.00 1.98
2767 3148 2.599677 GGGGACAGTGGGAGTAGATAG 58.400 57.143 0.00 0.00 0.00 2.08
2768 3149 1.219724 GGGGGACAGTGGGAGTAGATA 59.780 57.143 0.00 0.00 0.00 1.98
2770 3151 1.390926 GGGGGACAGTGGGAGTAGA 59.609 63.158 0.00 0.00 0.00 2.59
2771 3152 0.546747 TTGGGGGACAGTGGGAGTAG 60.547 60.000 0.00 0.00 0.00 2.57
2772 3153 0.104356 TTTGGGGGACAGTGGGAGTA 60.104 55.000 0.00 0.00 0.00 2.59
2773 3154 0.996762 TTTTGGGGGACAGTGGGAGT 60.997 55.000 0.00 0.00 0.00 3.85
2774 3155 0.409484 ATTTTGGGGGACAGTGGGAG 59.591 55.000 0.00 0.00 0.00 4.30
2776 3157 0.178935 ACATTTTGGGGGACAGTGGG 60.179 55.000 0.00 0.00 0.00 4.61
2777 3158 2.595750 TACATTTTGGGGGACAGTGG 57.404 50.000 0.00 0.00 0.00 4.00
2778 3159 3.506067 GTCTTACATTTTGGGGGACAGTG 59.494 47.826 0.00 0.00 0.00 3.66
2779 3160 3.763057 GTCTTACATTTTGGGGGACAGT 58.237 45.455 0.00 0.00 0.00 3.55
2780 3161 2.747446 CGTCTTACATTTTGGGGGACAG 59.253 50.000 0.00 0.00 0.00 3.51
2781 3162 2.785562 CGTCTTACATTTTGGGGGACA 58.214 47.619 0.00 0.00 0.00 4.02
2782 3163 1.471287 GCGTCTTACATTTTGGGGGAC 59.529 52.381 0.00 0.00 0.00 4.46
2783 3164 1.353022 AGCGTCTTACATTTTGGGGGA 59.647 47.619 0.00 0.00 0.00 4.81
2784 3165 1.834188 AGCGTCTTACATTTTGGGGG 58.166 50.000 0.00 0.00 0.00 5.40
2785 3166 2.556622 ACAAGCGTCTTACATTTTGGGG 59.443 45.455 0.00 0.00 0.00 4.96
2837 3225 0.546747 ACTCCTCCGTCCCCAAATGA 60.547 55.000 0.00 0.00 0.00 2.57
2843 3231 0.106116 ACAGATACTCCTCCGTCCCC 60.106 60.000 0.00 0.00 0.00 4.81
2897 3286 2.363683 CGAACGGACCTACTAACTCCT 58.636 52.381 0.00 0.00 0.00 3.69
2904 3293 0.896940 TGGAAGCGAACGGACCTACT 60.897 55.000 0.00 0.00 0.00 2.57
2931 3320 5.652014 GGTGTGAATTGATGGGAAATGAGTA 59.348 40.000 0.00 0.00 0.00 2.59
2978 3367 6.897986 TGGGCCATGCAATCTATTTATTTTT 58.102 32.000 0.00 0.00 0.00 1.94
2979 3368 6.497624 TGGGCCATGCAATCTATTTATTTT 57.502 33.333 0.00 0.00 0.00 1.82
2980 3369 6.126825 TGTTGGGCCATGCAATCTATTTATTT 60.127 34.615 7.26 0.00 0.00 1.40
2981 3370 5.366186 TGTTGGGCCATGCAATCTATTTATT 59.634 36.000 7.26 0.00 0.00 1.40
2984 3373 3.106054 TGTTGGGCCATGCAATCTATTT 58.894 40.909 7.26 0.00 0.00 1.40
2987 3376 2.457813 ATGTTGGGCCATGCAATCTA 57.542 45.000 7.26 0.00 0.00 1.98
2995 3384 1.044790 GCCTGCTAATGTTGGGCCAT 61.045 55.000 7.26 0.00 37.12 4.40
3001 3390 1.009829 GAGACGGCCTGCTAATGTTG 58.990 55.000 0.00 0.00 0.00 3.33
3004 3393 1.227674 GGGAGACGGCCTGCTAATG 60.228 63.158 0.00 0.00 33.27 1.90
3005 3394 2.444256 GGGGAGACGGCCTGCTAAT 61.444 63.158 0.00 0.00 33.27 1.73
3007 3396 3.916438 TTGGGGAGACGGCCTGCTA 62.916 63.158 0.00 0.00 33.27 3.49
3026 3415 2.549633 ATTACACGTAGACCGAACGG 57.450 50.000 11.83 11.83 44.48 4.44
3364 6293 0.805322 GATGACGAGACCTGCTGCAG 60.805 60.000 22.44 22.44 0.00 4.41
3378 6307 0.739813 GTGGTGCCACTACCGATGAC 60.740 60.000 13.68 0.00 43.87 3.06
3445 6374 0.643820 GCTCGCTGCAAATTTGATGC 59.356 50.000 22.31 20.52 44.08 3.91
3453 6382 0.097499 CAATGATCGCTCGCTGCAAA 59.903 50.000 0.00 0.00 43.06 3.68
3469 6398 4.778143 GCAGGGGGCGACGACAAT 62.778 66.667 1.63 0.00 0.00 2.71
3580 6511 1.077930 CAGGAGATGGTGGTGCTGG 60.078 63.158 0.00 0.00 0.00 4.85
3602 6533 0.601558 TGGTGACAGACGGAAGTAGC 59.398 55.000 0.00 0.00 39.81 3.58
3636 6567 1.336755 CAAAAGCTACAACCGGCAAGT 59.663 47.619 0.00 0.00 0.00 3.16
3643 6574 3.702330 GACAACCACAAAAGCTACAACC 58.298 45.455 0.00 0.00 0.00 3.77
3657 6588 0.888619 TTTGTTGCAACCGACAACCA 59.111 45.000 26.14 2.40 45.42 3.67
3663 6594 1.974265 TCCTGATTTGTTGCAACCGA 58.026 45.000 26.14 15.02 0.00 4.69
3680 6611 4.590487 TGGCGACAGACGAAATCC 57.410 55.556 0.00 0.00 45.77 3.01
3693 6624 4.084589 GGTTTTTGTTTTGCTTCTATGGCG 60.085 41.667 0.00 0.00 0.00 5.69
3730 6661 1.209127 CAACCGGCTACCGCAAAAG 59.791 57.895 0.00 0.00 46.86 2.27
3779 6710 1.939980 AGGTCTGGGGTGTTCTCTAC 58.060 55.000 0.00 0.00 0.00 2.59
3793 6724 4.705023 ACAACTGTTTTTGCTACAAGGTCT 59.295 37.500 0.00 0.00 0.00 3.85
3795 6726 5.167845 CAACAACTGTTTTTGCTACAAGGT 58.832 37.500 6.50 0.00 35.83 3.50
3828 6759 0.725686 CTGCAATCGACTGAAGCCAG 59.274 55.000 0.00 0.00 45.76 4.85
3829 6760 1.300971 GCTGCAATCGACTGAAGCCA 61.301 55.000 16.15 0.00 41.56 4.75
3910 6841 1.738099 CTGGAACCGACAGAAGCCG 60.738 63.158 0.00 0.00 38.20 5.52
3911 6842 2.035442 GCTGGAACCGACAGAAGCC 61.035 63.158 0.00 0.00 38.20 4.35
3955 6886 4.577246 CTGCGACCGCCTAGAGCC 62.577 72.222 12.08 0.00 41.09 4.70
3957 6888 2.635229 AATGCTGCGACCGCCTAGAG 62.635 60.000 12.08 3.68 41.09 2.43
3958 6889 2.629050 GAATGCTGCGACCGCCTAGA 62.629 60.000 12.08 0.00 41.09 2.43
3959 6890 2.202932 AATGCTGCGACCGCCTAG 60.203 61.111 12.08 4.75 41.09 3.02
3960 6891 2.202878 GAATGCTGCGACCGCCTA 60.203 61.111 12.08 0.00 41.09 3.93
3980 6911 3.372954 AGTATAATCAGAAGCGCGTGAC 58.627 45.455 8.43 0.00 0.00 3.67
3981 6912 3.710326 AGTATAATCAGAAGCGCGTGA 57.290 42.857 8.43 6.59 0.00 4.35
3982 6913 5.883328 TTTAGTATAATCAGAAGCGCGTG 57.117 39.130 8.43 0.00 0.00 5.34
3983 6914 6.448006 AGATTTAGTATAATCAGAAGCGCGT 58.552 36.000 8.43 0.00 37.06 6.01
3984 6915 6.936222 AGATTTAGTATAATCAGAAGCGCG 57.064 37.500 0.00 0.00 37.06 6.86
3985 6916 8.527567 AGAAGATTTAGTATAATCAGAAGCGC 57.472 34.615 0.00 0.00 37.06 5.92
4030 6961 1.348250 CAACGTTGATGGATCGCCG 59.652 57.895 23.90 0.00 36.79 6.46
4031 6962 0.096976 CACAACGTTGATGGATCGCC 59.903 55.000 33.66 0.00 0.00 5.54
4035 6966 3.338249 CCTTCTCACAACGTTGATGGAT 58.662 45.455 33.66 9.00 0.00 3.41
4036 6967 2.766313 CCTTCTCACAACGTTGATGGA 58.234 47.619 33.66 23.64 0.00 3.41
4037 6968 1.197721 GCCTTCTCACAACGTTGATGG 59.802 52.381 33.66 21.54 0.00 3.51
4038 6969 1.136252 CGCCTTCTCACAACGTTGATG 60.136 52.381 33.66 24.97 0.00 3.07
4039 6970 1.148310 CGCCTTCTCACAACGTTGAT 58.852 50.000 33.66 15.57 0.00 2.57
4040 6971 1.495584 GCGCCTTCTCACAACGTTGA 61.496 55.000 33.66 12.64 0.00 3.18
4041 6972 1.082756 GCGCCTTCTCACAACGTTG 60.083 57.895 26.20 26.20 0.00 4.10
4042 6973 1.498865 CTGCGCCTTCTCACAACGTT 61.499 55.000 4.18 0.00 0.00 3.99
4043 6974 1.956170 CTGCGCCTTCTCACAACGT 60.956 57.895 4.18 0.00 0.00 3.99
4044 6975 1.664649 TCTGCGCCTTCTCACAACG 60.665 57.895 4.18 0.00 0.00 4.10
4045 6976 0.601311 AGTCTGCGCCTTCTCACAAC 60.601 55.000 4.18 0.00 0.00 3.32
4046 6977 0.966179 TAGTCTGCGCCTTCTCACAA 59.034 50.000 4.18 0.00 0.00 3.33
4047 6978 0.966179 TTAGTCTGCGCCTTCTCACA 59.034 50.000 4.18 0.00 0.00 3.58
4048 6979 1.634702 CTTAGTCTGCGCCTTCTCAC 58.365 55.000 4.18 0.00 0.00 3.51
4049 6980 0.532573 CCTTAGTCTGCGCCTTCTCA 59.467 55.000 4.18 0.00 0.00 3.27
4050 6981 0.808060 GCCTTAGTCTGCGCCTTCTC 60.808 60.000 4.18 0.00 0.00 2.87
4051 6982 1.219393 GCCTTAGTCTGCGCCTTCT 59.781 57.895 4.18 2.47 0.00 2.85
4052 6983 0.462759 ATGCCTTAGTCTGCGCCTTC 60.463 55.000 4.18 0.00 0.00 3.46
4053 6984 0.830648 TATGCCTTAGTCTGCGCCTT 59.169 50.000 4.18 0.00 0.00 4.35
4054 6985 0.390860 CTATGCCTTAGTCTGCGCCT 59.609 55.000 4.18 0.00 0.00 5.52
4055 6986 1.224722 GCTATGCCTTAGTCTGCGCC 61.225 60.000 4.18 0.00 0.00 6.53
4056 6987 1.224722 GGCTATGCCTTAGTCTGCGC 61.225 60.000 0.00 0.00 46.69 6.09
4057 6988 2.906047 GGCTATGCCTTAGTCTGCG 58.094 57.895 0.73 0.00 46.69 5.18
4081 7012 2.704424 GGCATCAACCCCTCCCCAT 61.704 63.158 0.00 0.00 0.00 4.00
4086 7017 1.076705 GGGAAGGCATCAACCCCTC 60.077 63.158 0.00 0.00 36.65 4.30
4127 7058 4.514816 GCAACAAACCCAAATTGCAAGTAT 59.485 37.500 4.94 0.00 45.38 2.12
4199 7147 3.003689 AGAACATTTGCCTTCTCACAACG 59.996 43.478 0.00 0.00 0.00 4.10
4213 7161 5.010617 ACGTTGGCCTTTTCATAGAACATTT 59.989 36.000 3.32 0.00 0.00 2.32
4225 7173 3.069016 CCCTTCTTAAACGTTGGCCTTTT 59.931 43.478 3.32 0.74 0.00 2.27
4232 7180 4.625972 ACAACACCCTTCTTAAACGTTG 57.374 40.909 0.00 0.00 38.51 4.10
4234 7182 6.756299 TTTTACAACACCCTTCTTAAACGT 57.244 33.333 0.00 0.00 0.00 3.99
4492 7442 2.092592 TCGCCGATATCCATCTAGCCTA 60.093 50.000 0.00 0.00 0.00 3.93
4627 9277 3.461085 ACCTATGTCAATGGCTCATCCTT 59.539 43.478 0.00 0.00 35.26 3.36
4829 9856 8.587608 AGCATGTATTTTCAGAGGAATTTGAAA 58.412 29.630 0.00 0.00 40.46 2.69
4830 9857 8.030692 CAGCATGTATTTTCAGAGGAATTTGAA 58.969 33.333 0.00 0.00 31.93 2.69
4831 9858 7.541162 CAGCATGTATTTTCAGAGGAATTTGA 58.459 34.615 0.00 0.00 31.93 2.69
4832 9859 7.751047 CAGCATGTATTTTCAGAGGAATTTG 57.249 36.000 0.00 0.00 31.93 2.32
4906 9933 4.685169 TTTTGCGCCAATTTGAAAAACA 57.315 31.818 4.18 0.00 0.00 2.83
4907 9934 5.741040 TCAATTTTGCGCCAATTTGAAAAAC 59.259 32.000 21.95 0.00 29.42 2.43
4946 9973 6.609907 TTTATGATGCGAATGTGAAAAACG 57.390 33.333 0.00 0.00 0.00 3.60
4991 10153 0.899019 AGGGTTTGGCGTGTGTTTTT 59.101 45.000 0.00 0.00 0.00 1.94
4992 10154 1.765230 TAGGGTTTGGCGTGTGTTTT 58.235 45.000 0.00 0.00 0.00 2.43
4996 10158 1.579429 GCTTAGGGTTTGGCGTGTG 59.421 57.895 0.00 0.00 0.00 3.82
4998 10160 2.340328 GGGCTTAGGGTTTGGCGTG 61.340 63.158 0.00 0.00 0.00 5.34
5001 10163 0.330267 TGTAGGGCTTAGGGTTTGGC 59.670 55.000 0.00 0.00 0.00 4.52
5003 10165 2.654863 CCATGTAGGGCTTAGGGTTTG 58.345 52.381 0.00 0.00 0.00 2.93
5065 10227 4.872691 GCGGGATTATGTGATCCTCAATAG 59.127 45.833 4.12 0.00 44.17 1.73
5086 10248 3.694058 ATGCTTCAGGCTCCCAGCG 62.694 63.158 5.00 0.00 43.62 5.18
5126 10288 9.696917 AGCCAAAGATGTTCTTATTAAAGTTTG 57.303 29.630 0.00 0.00 35.27 2.93
5127 10289 9.914131 GAGCCAAAGATGTTCTTATTAAAGTTT 57.086 29.630 0.00 0.00 35.27 2.66
5135 10297 8.181904 TCTTTTTGAGCCAAAGATGTTCTTAT 57.818 30.769 1.52 0.00 35.27 1.73
5193 10355 8.697846 TTCACGTATTTAAAGATAGAGTGTGG 57.302 34.615 0.00 0.00 0.00 4.17
5315 10640 1.771255 GAGGTGCCCTAATGGACTCAT 59.229 52.381 0.00 0.00 31.76 2.90
5321 10646 2.026641 CAACATGAGGTGCCCTAATGG 58.973 52.381 18.05 3.31 44.78 3.16
5356 10681 4.016444 TCTTTTTATGCGCCAGGAGAAAT 58.984 39.130 4.18 0.00 29.45 2.17
5364 10689 3.153919 AGAAACCTCTTTTTATGCGCCA 58.846 40.909 4.18 0.00 0.00 5.69
5366 10691 6.639279 TGTTTTAGAAACCTCTTTTTATGCGC 59.361 34.615 0.00 0.00 32.70 6.09
5375 10700 7.661040 CATCACCAATGTTTTAGAAACCTCTT 58.339 34.615 1.53 0.00 32.70 2.85
5410 10744 3.023119 TCTGTTGTTTGTCAAGGCATGT 58.977 40.909 0.00 0.00 36.66 3.21
5445 10779 6.214208 TGCTCCCATAGTGAAGCATCTATTAT 59.786 38.462 0.00 0.00 0.00 1.28
5447 10781 4.349048 TGCTCCCATAGTGAAGCATCTATT 59.651 41.667 0.00 0.00 0.00 1.73
5473 10809 1.066858 AGTGGCATCCAAGTAGTGTCG 60.067 52.381 0.00 0.00 34.18 4.35
5509 10847 3.118884 CCGGAATCCTAAAGACGAGGAAA 60.119 47.826 0.00 0.00 46.19 3.13
5510 10848 2.429610 CCGGAATCCTAAAGACGAGGAA 59.570 50.000 0.00 0.00 46.19 3.36
5524 10862 4.640201 TCAACAAAAGGATCATCCGGAATC 59.360 41.667 9.01 8.08 42.75 2.52
5529 10867 5.627499 TTTCTCAACAAAAGGATCATCCG 57.373 39.130 0.00 0.00 42.75 4.18
5530 10868 8.511604 TCTATTTCTCAACAAAAGGATCATCC 57.488 34.615 0.00 0.00 36.58 3.51
5574 10912 5.424757 CAAATATTCTCGTAAGGTGACCCA 58.575 41.667 0.00 0.00 38.47 4.51
5587 10925 7.413328 GCAAAGGCATTTTGTCCAAATATTCTC 60.413 37.037 12.65 0.00 46.35 2.87
5630 10971 5.358160 GGACAATTAGAGCTTATTGGCACTT 59.642 40.000 18.80 2.75 40.74 3.16
5637 10978 6.170506 TCGTGTTGGACAATTAGAGCTTATT 58.829 36.000 0.00 0.00 0.00 1.40
5669 11010 3.350219 ACATGAGGGTGTGGTAATCAC 57.650 47.619 0.00 0.00 46.23 3.06
5710 11051 0.106519 AAGGCCACCATGCACCTATC 60.107 55.000 5.01 0.00 0.00 2.08
5789 11132 2.088950 TTTACTGTTAGCCTCCACGC 57.911 50.000 0.00 0.00 0.00 5.34
5790 11133 4.693566 TGATTTTTACTGTTAGCCTCCACG 59.306 41.667 0.00 0.00 0.00 4.94
5837 11180 4.278669 TGTCCTTATCCGCACTAATCTCTC 59.721 45.833 0.00 0.00 0.00 3.20
5858 11201 8.306313 TGGATTAGACTTACAGATGTATGTGT 57.694 34.615 14.20 12.83 38.49 3.72
5911 11254 2.342910 TAAACTCGGTCAGCTCGAAC 57.657 50.000 0.00 0.00 36.15 3.95
5936 11279 4.262036 GGTTGCGTATGTCAGAGGATATGA 60.262 45.833 0.00 0.00 0.00 2.15
5937 11280 3.990469 GGTTGCGTATGTCAGAGGATATG 59.010 47.826 0.00 0.00 0.00 1.78
5938 11281 3.641436 TGGTTGCGTATGTCAGAGGATAT 59.359 43.478 0.00 0.00 0.00 1.63
5939 11282 3.028130 TGGTTGCGTATGTCAGAGGATA 58.972 45.455 0.00 0.00 0.00 2.59
5940 11283 1.831106 TGGTTGCGTATGTCAGAGGAT 59.169 47.619 0.00 0.00 0.00 3.24
5941 11284 1.067142 GTGGTTGCGTATGTCAGAGGA 60.067 52.381 0.00 0.00 0.00 3.71
5942 11285 1.337728 TGTGGTTGCGTATGTCAGAGG 60.338 52.381 0.00 0.00 0.00 3.69
5943 11286 2.078849 TGTGGTTGCGTATGTCAGAG 57.921 50.000 0.00 0.00 0.00 3.35
5944 11287 2.139917 GTTGTGGTTGCGTATGTCAGA 58.860 47.619 0.00 0.00 0.00 3.27
5952 11296 0.387565 GGATTTGGTTGTGGTTGCGT 59.612 50.000 0.00 0.00 0.00 5.24
6307 11766 3.823873 AGAGAAAGCGAGAGTGAGAGAAA 59.176 43.478 0.00 0.00 0.00 2.52
6308 11767 3.417101 AGAGAAAGCGAGAGTGAGAGAA 58.583 45.455 0.00 0.00 0.00 2.87
6309 11768 3.006940 GAGAGAAAGCGAGAGTGAGAGA 58.993 50.000 0.00 0.00 0.00 3.10
6310 11769 2.746904 TGAGAGAAAGCGAGAGTGAGAG 59.253 50.000 0.00 0.00 0.00 3.20
6311 11770 2.486203 GTGAGAGAAAGCGAGAGTGAGA 59.514 50.000 0.00 0.00 0.00 3.27
6312 11771 2.487762 AGTGAGAGAAAGCGAGAGTGAG 59.512 50.000 0.00 0.00 0.00 3.51
6313 11772 2.486203 GAGTGAGAGAAAGCGAGAGTGA 59.514 50.000 0.00 0.00 0.00 3.41
6314 11773 2.487762 AGAGTGAGAGAAAGCGAGAGTG 59.512 50.000 0.00 0.00 0.00 3.51
6315 11774 2.747446 GAGAGTGAGAGAAAGCGAGAGT 59.253 50.000 0.00 0.00 0.00 3.24
6316 11775 2.223021 CGAGAGTGAGAGAAAGCGAGAG 60.223 54.545 0.00 0.00 0.00 3.20
6317 11776 1.735018 CGAGAGTGAGAGAAAGCGAGA 59.265 52.381 0.00 0.00 0.00 4.04
6318 11777 1.793714 GCGAGAGTGAGAGAAAGCGAG 60.794 57.143 0.00 0.00 0.00 5.03
7170 12709 2.859165 TTTCAGAGAATTCAGCCCGT 57.141 45.000 8.44 0.00 0.00 5.28
7175 12714 9.558396 AAAGCCTCTATATTTCAGAGAATTCAG 57.442 33.333 8.44 0.00 41.80 3.02
7203 12742 2.029470 GGTCCGTCATGGCATTTTTCAA 60.029 45.455 0.00 0.00 37.80 2.69
7265 12804 2.825836 GGGGCGATGGCTGTGAAG 60.826 66.667 0.00 0.00 39.81 3.02
7282 12821 5.835113 ATCTAACCAATTTTCATGGACGG 57.165 39.130 0.00 0.00 40.56 4.79
7283 12822 8.173321 GAAAATCTAACCAATTTTCATGGACG 57.827 34.615 13.60 0.00 45.77 4.79
7296 12835 7.408756 AATAGCATGCAAGAAAATCTAACCA 57.591 32.000 21.98 0.00 0.00 3.67
7361 12900 6.042777 CCTCGCTTGTATTTGACTCTCATAA 58.957 40.000 0.00 0.00 0.00 1.90
7374 12913 1.276622 AGGACAACCCTCGCTTGTAT 58.723 50.000 0.00 0.00 43.31 2.29
7410 12949 1.868997 CATGACGTGTGCCAAGGTC 59.131 57.895 0.00 2.54 0.00 3.85
7432 12971 7.095187 ACACGAGAATTCTATCTTTTCAACACC 60.095 37.037 8.25 0.00 0.00 4.16
7582 13122 3.724508 AGATGCCATCTCTTAGTCACG 57.275 47.619 0.08 0.00 33.42 4.35
7643 13183 6.261158 CGATAAGGTAACATGAGAGTGAGAGA 59.739 42.308 0.00 0.00 41.41 3.10
7837 13381 8.327941 GTTAAAACGGACCTTTTAGGACTATT 57.672 34.615 0.00 0.00 37.67 1.73
7907 13451 3.170991 TGCCCCGCTAGATAGATAACT 57.829 47.619 0.00 0.00 0.00 2.24
7913 13457 2.158957 TCAAACTTGCCCCGCTAGATAG 60.159 50.000 0.00 0.00 35.20 2.08
7918 13462 2.361789 GTAATCAAACTTGCCCCGCTA 58.638 47.619 0.00 0.00 0.00 4.26
7922 13466 3.692690 TGTAGGTAATCAAACTTGCCCC 58.307 45.455 0.00 0.00 31.82 5.80
8013 13558 2.758979 GGTGCACTTGTAGTAGCTCCTA 59.241 50.000 17.98 0.00 35.28 2.94
8073 13618 3.617368 CACCTAGGGTCGGTGGAG 58.383 66.667 14.81 0.00 46.38 3.86
8094 13639 0.457035 GCCCGGTGTATGTCGTTAGA 59.543 55.000 0.00 0.00 0.00 2.10
8197 13742 3.499737 CGGGTTCACTGCGGATGC 61.500 66.667 0.00 0.00 43.20 3.91
8216 13761 3.364441 GGTGCAATGTGCTGCCGA 61.364 61.111 0.00 0.00 45.31 5.54
8267 13812 5.522097 CCATTAAAAATGTGTTAATCCCGGC 59.478 40.000 0.00 0.00 30.47 6.13
8399 13945 9.807649 ATATGTCAATTCCTCTAAAACAAATGC 57.192 29.630 0.00 0.00 0.00 3.56
8493 14039 2.172851 TCAAAACCTCGGCGTAACAT 57.827 45.000 6.85 0.00 0.00 2.71
8522 14068 3.609853 TGCAACAGTGAGGATAACCATC 58.390 45.455 0.00 0.00 38.94 3.51
8583 14129 4.980590 TGTGCGCAAATTAACCATTCTAG 58.019 39.130 14.00 0.00 0.00 2.43
8648 14201 9.601217 GCGTAGGAATAGGATGTTGAATTATAT 57.399 33.333 0.00 0.00 0.00 0.86
8778 14333 5.245977 CCTACCCAAGTGGAACAAAAATGAT 59.754 40.000 0.00 0.00 44.16 2.45
8828 14383 4.621991 AGTGCTTATGTAGGATAGTTGCG 58.378 43.478 0.00 0.00 0.00 4.85
8941 14496 0.953727 TGTGCACACTCATGAAAGGC 59.046 50.000 17.42 0.00 0.00 4.35
8955 14510 7.065324 CCGACTAATTAGTTTATTTCCTGTGCA 59.935 37.037 18.96 0.00 36.50 4.57
8961 14516 8.496707 TGAACCCGACTAATTAGTTTATTTCC 57.503 34.615 18.96 4.14 36.50 3.13
9074 14629 8.448615 GGCGAACTTTATTTTGTGTAGATTACT 58.551 33.333 0.00 0.00 0.00 2.24
9085 14640 4.864247 CCTGGAATGGCGAACTTTATTTTG 59.136 41.667 0.00 0.00 0.00 2.44
9107 14667 3.049912 CACTAAAAGAAGCAAAACCGCC 58.950 45.455 0.00 0.00 0.00 6.13
9112 14672 5.108517 CACCAAGCACTAAAAGAAGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
9195 14755 3.767902 TGTTCATCATCCACTGACACA 57.232 42.857 0.00 0.00 36.48 3.72
9204 14764 5.587844 AGCTACTTCATGTTGTTCATCATCC 59.412 40.000 0.00 0.00 34.09 3.51
9251 14811 5.181748 TGCCAAACACTTGCAGTTTTATTT 58.818 33.333 0.13 0.00 37.10 1.40
9252 14812 4.764172 TGCCAAACACTTGCAGTTTTATT 58.236 34.783 0.13 0.00 37.10 1.40
9254 14814 3.876274 TGCCAAACACTTGCAGTTTTA 57.124 38.095 0.13 0.00 37.10 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.