Multiple sequence alignment - TraesCS5D01G404700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G404700 chr5D 100.000 5506 0 0 1 5506 469731275 469725770 0.000000e+00 10168.0
1 TraesCS5D01G404700 chr5D 96.276 913 30 2 4597 5506 503689102 503688191 0.000000e+00 1495.0
2 TraesCS5D01G404700 chr5A 91.549 1633 90 19 1756 3383 590678596 590677007 0.000000e+00 2207.0
3 TraesCS5D01G404700 chr5A 89.154 1005 58 17 763 1755 590679624 590678659 0.000000e+00 1205.0
4 TraesCS5D01G404700 chr5A 86.813 819 80 23 3401 4208 590676692 590675891 0.000000e+00 889.0
5 TraesCS5D01G404700 chr5A 89.296 355 18 11 4237 4581 590675610 590675266 1.420000e-115 427.0
6 TraesCS5D01G404700 chr3A 81.496 2340 257 90 403 2706 584378717 584376518 0.000000e+00 1760.0
7 TraesCS5D01G404700 chr3A 87.088 1092 80 23 1614 2696 584474804 584473765 0.000000e+00 1179.0
8 TraesCS5D01G404700 chr3A 88.764 712 62 10 2695 3398 584450297 584449596 0.000000e+00 856.0
9 TraesCS5D01G404700 chr3A 88.608 711 62 8 2695 3398 584376126 584375428 0.000000e+00 846.0
10 TraesCS5D01G404700 chr3A 85.168 654 76 14 2708 3352 584354574 584353933 0.000000e+00 651.0
11 TraesCS5D01G404700 chr3A 89.776 401 37 4 2297 2696 584355020 584354623 1.370000e-140 510.0
12 TraesCS5D01G404700 chr3A 86.200 471 47 10 1644 2106 584355806 584355346 1.380000e-135 494.0
13 TraesCS5D01G404700 chr3A 79.265 762 91 30 3705 4456 584375064 584374360 2.320000e-128 470.0
14 TraesCS5D01G404700 chr3A 77.182 802 123 27 3404 4183 584353843 584353080 3.970000e-111 412.0
15 TraesCS5D01G404700 chr3A 84.881 377 48 4 3807 4182 584449046 584448678 6.740000e-99 372.0
16 TraesCS5D01G404700 chr3A 79.424 486 56 22 862 1343 584373287 584372842 2.490000e-78 303.0
17 TraesCS5D01G404700 chr3A 82.831 332 27 19 1020 1334 584475655 584475337 2.530000e-68 270.0
18 TraesCS5D01G404700 chr3A 84.279 229 25 4 1372 1600 584475009 584474792 4.320000e-51 213.0
19 TraesCS5D01G404700 chr5B 91.984 1285 55 15 1435 2701 577365790 577364536 0.000000e+00 1759.0
20 TraesCS5D01G404700 chr5B 87.889 933 74 21 3164 4083 577359650 577358744 0.000000e+00 1061.0
21 TraesCS5D01G404700 chr5B 92.208 462 24 6 978 1437 577366515 577366064 1.290000e-180 643.0
22 TraesCS5D01G404700 chr5B 92.448 384 16 5 2799 3179 577363933 577363560 2.260000e-148 536.0
23 TraesCS5D01G404700 chr5B 96.715 274 9 0 4241 4514 577353196 577352923 1.810000e-124 457.0
24 TraesCS5D01G404700 chr5B 90.805 87 7 1 4104 4189 577358462 577358376 1.250000e-21 115.0
25 TraesCS5D01G404700 chr6D 98.686 913 11 1 4594 5506 8030380 8029469 0.000000e+00 1618.0
26 TraesCS5D01G404700 chr6D 98.357 913 9 3 4596 5506 363872003 363871095 0.000000e+00 1598.0
27 TraesCS5D01G404700 chr7D 98.571 910 13 0 4597 5506 376940970 376940061 0.000000e+00 1609.0
28 TraesCS5D01G404700 chr2D 97.262 913 25 0 4594 5506 630837893 630836981 0.000000e+00 1548.0
29 TraesCS5D01G404700 chr2D 96.923 910 27 1 4597 5506 174242704 174243612 0.000000e+00 1524.0
30 TraesCS5D01G404700 chr2D 96.817 911 22 6 4596 5506 430997639 430998542 0.000000e+00 1515.0
31 TraesCS5D01G404700 chr2D 87.342 79 7 1 65 143 561060889 561060964 2.730000e-13 87.9
32 TraesCS5D01G404700 chr1D 96.204 922 33 2 4586 5506 455646665 455647585 0.000000e+00 1507.0
33 TraesCS5D01G404700 chr4A 96.284 915 32 2 4592 5506 721920863 721919951 0.000000e+00 1500.0
34 TraesCS5D01G404700 chr4A 81.437 167 23 3 1 167 509357039 509356881 4.480000e-26 130.0
35 TraesCS5D01G404700 chr3B 85.858 1393 136 28 1323 2701 581134506 581133161 0.000000e+00 1424.0
36 TraesCS5D01G404700 chr3B 79.128 1811 237 79 942 2697 710388184 710389908 0.000000e+00 1120.0
37 TraesCS5D01G404700 chr3B 84.225 1103 135 29 1622 2697 581091580 581090490 0.000000e+00 1037.0
38 TraesCS5D01G404700 chr3B 89.730 555 40 6 2692 3239 581132764 581132220 0.000000e+00 693.0
39 TraesCS5D01G404700 chr3B 80.722 887 113 35 3591 4456 581088904 581088055 6.020000e-179 638.0
40 TraesCS5D01G404700 chr3B 84.772 637 84 9 3557 4183 581130309 581129676 1.300000e-175 627.0
41 TraesCS5D01G404700 chr3B 86.592 537 61 5 2695 3230 710390540 710391066 2.860000e-162 582.0
42 TraesCS5D01G404700 chr3B 78.199 977 118 45 391 1319 581135584 581134655 2.260000e-148 536.0
43 TraesCS5D01G404700 chr3B 75.345 580 100 23 3620 4192 581265348 581264805 7.130000e-59 239.0
44 TraesCS5D01G404700 chr3D 85.561 1399 139 31 1323 2701 443430796 443429441 0.000000e+00 1406.0
45 TraesCS5D01G404700 chr3D 88.828 1092 68 21 1614 2696 443443181 443442135 0.000000e+00 1291.0
46 TraesCS5D01G404700 chr3D 82.365 1514 174 59 1224 2696 443421384 443419923 0.000000e+00 1230.0
47 TraesCS5D01G404700 chr3D 86.355 1114 120 25 1614 2706 443363720 443362618 0.000000e+00 1186.0
48 TraesCS5D01G404700 chr3D 84.029 1102 136 31 1613 2697 443319260 443318182 0.000000e+00 1024.0
49 TraesCS5D01G404700 chr3D 89.888 712 53 7 2695 3398 443441834 443441134 0.000000e+00 898.0
50 TraesCS5D01G404700 chr3D 87.169 717 75 10 2695 3408 443362323 443361621 0.000000e+00 798.0
51 TraesCS5D01G404700 chr3D 89.550 555 41 6 2692 3239 443429042 443428498 0.000000e+00 688.0
52 TraesCS5D01G404700 chr3D 85.802 655 68 14 2708 3352 443419874 443419235 0.000000e+00 671.0
53 TraesCS5D01G404700 chr3D 79.367 1042 142 36 1020 2036 443438725 443437732 0.000000e+00 665.0
54 TraesCS5D01G404700 chr3D 84.724 635 77 15 3563 4186 443427210 443426585 7.840000e-173 617.0
55 TraesCS5D01G404700 chr3D 83.422 567 79 9 3620 4183 443359299 443358745 3.800000e-141 512.0
56 TraesCS5D01G404700 chr3D 77.283 876 111 52 755 1600 443443986 443443169 8.470000e-118 435.0
57 TraesCS5D01G404700 chr3D 85.117 383 47 5 3807 4187 443440569 443440195 3.110000e-102 383.0
58 TraesCS5D01G404700 chr3D 79.174 581 82 25 2148 2697 443437570 443436998 3.130000e-97 366.0
59 TraesCS5D01G404700 chr3D 80.942 446 44 22 882 1319 443431356 443430944 1.150000e-81 315.0
60 TraesCS5D01G404700 chr3D 81.330 391 49 13 3808 4186 443413603 443413225 4.170000e-76 296.0
61 TraesCS5D01G404700 chr3D 79.482 463 52 23 862 1316 443319910 443319483 6.980000e-74 289.0
62 TraesCS5D01G404700 chr3D 84.158 303 35 6 3885 4182 443294484 443294190 1.170000e-71 281.0
63 TraesCS5D01G404700 chr3D 82.222 315 41 9 3050 3352 443295485 443295174 1.970000e-64 257.0
64 TraesCS5D01G404700 chr3D 89.848 197 20 0 4255 4451 443356462 443356266 2.550000e-63 254.0
65 TraesCS5D01G404700 chr3D 76.697 545 60 24 385 891 443431910 443431395 1.980000e-59 241.0
66 TraesCS5D01G404700 chr3D 90.299 134 13 0 1020 1153 443421643 443421510 5.670000e-40 176.0
67 TraesCS5D01G404700 chr3D 77.208 351 38 19 1224 1549 443364089 443363756 3.410000e-37 167.0
68 TraesCS5D01G404700 chr3D 81.643 207 23 7 3599 3804 443294697 443294505 2.050000e-34 158.0
69 TraesCS5D01G404700 chr3D 75.714 280 59 9 2384 2659 550651746 550652020 1.240000e-26 132.0
70 TraesCS5D01G404700 chr3D 90.667 75 7 0 4382 4456 443411025 443410951 3.510000e-17 100.0
71 TraesCS5D01G404700 chr3D 73.684 323 53 13 3404 3695 443419145 443418824 4.540000e-16 97.1
72 TraesCS5D01G404700 chr3D 91.304 69 6 0 1235 1303 551073409 551073477 1.630000e-15 95.3
73 TraesCS5D01G404700 chr3D 95.455 44 2 0 4413 4456 443275361 443275318 2.750000e-08 71.3
74 TraesCS5D01G404700 chrUn 87.425 167 17 4 1 166 82407633 82407470 7.280000e-44 189.0
75 TraesCS5D01G404700 chr7B 97.959 49 1 0 2948 2996 220412792 220412744 9.830000e-13 86.1
76 TraesCS5D01G404700 chr7B 91.379 58 2 1 1747 1801 656489013 656488956 5.910000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G404700 chr5D 469725770 469731275 5505 True 10168.000 10168 100.000000 1 5506 1 chr5D.!!$R1 5505
1 TraesCS5D01G404700 chr5D 503688191 503689102 911 True 1495.000 1495 96.276000 4597 5506 1 chr5D.!!$R2 909
2 TraesCS5D01G404700 chr5A 590675266 590679624 4358 True 1182.000 2207 89.203000 763 4581 4 chr5A.!!$R1 3818
3 TraesCS5D01G404700 chr3A 584372842 584378717 5875 True 844.750 1760 82.198250 403 4456 4 chr3A.!!$R2 4053
4 TraesCS5D01G404700 chr3A 584448678 584450297 1619 True 614.000 856 86.822500 2695 4182 2 chr3A.!!$R3 1487
5 TraesCS5D01G404700 chr3A 584473765 584475655 1890 True 554.000 1179 84.732667 1020 2696 3 chr3A.!!$R4 1676
6 TraesCS5D01G404700 chr3A 584353080 584355806 2726 True 516.750 651 84.581500 1644 4183 4 chr3A.!!$R1 2539
7 TraesCS5D01G404700 chr5B 577358376 577366515 8139 True 822.800 1759 91.066800 978 4189 5 chr5B.!!$R2 3211
8 TraesCS5D01G404700 chr6D 8029469 8030380 911 True 1618.000 1618 98.686000 4594 5506 1 chr6D.!!$R1 912
9 TraesCS5D01G404700 chr6D 363871095 363872003 908 True 1598.000 1598 98.357000 4596 5506 1 chr6D.!!$R2 910
10 TraesCS5D01G404700 chr7D 376940061 376940970 909 True 1609.000 1609 98.571000 4597 5506 1 chr7D.!!$R1 909
11 TraesCS5D01G404700 chr2D 630836981 630837893 912 True 1548.000 1548 97.262000 4594 5506 1 chr2D.!!$R1 912
12 TraesCS5D01G404700 chr2D 174242704 174243612 908 False 1524.000 1524 96.923000 4597 5506 1 chr2D.!!$F1 909
13 TraesCS5D01G404700 chr2D 430997639 430998542 903 False 1515.000 1515 96.817000 4596 5506 1 chr2D.!!$F2 910
14 TraesCS5D01G404700 chr1D 455646665 455647585 920 False 1507.000 1507 96.204000 4586 5506 1 chr1D.!!$F1 920
15 TraesCS5D01G404700 chr4A 721919951 721920863 912 True 1500.000 1500 96.284000 4592 5506 1 chr4A.!!$R2 914
16 TraesCS5D01G404700 chr3B 710388184 710391066 2882 False 851.000 1120 82.860000 942 3230 2 chr3B.!!$F1 2288
17 TraesCS5D01G404700 chr3B 581088055 581091580 3525 True 837.500 1037 82.473500 1622 4456 2 chr3B.!!$R2 2834
18 TraesCS5D01G404700 chr3B 581129676 581135584 5908 True 820.000 1424 84.639750 391 4183 4 chr3B.!!$R3 3792
19 TraesCS5D01G404700 chr3B 581264805 581265348 543 True 239.000 239 75.345000 3620 4192 1 chr3B.!!$R1 572
20 TraesCS5D01G404700 chr3D 443436998 443443986 6988 True 673.000 1291 83.276167 755 4187 6 chr3D.!!$R8 3432
21 TraesCS5D01G404700 chr3D 443318182 443319910 1728 True 656.500 1024 81.755500 862 2697 2 chr3D.!!$R3 1835
22 TraesCS5D01G404700 chr3D 443426585 443431910 5325 True 653.400 1406 83.494800 385 4186 5 chr3D.!!$R7 3801
23 TraesCS5D01G404700 chr3D 443356266 443364089 7823 True 583.400 1186 84.800400 1224 4451 5 chr3D.!!$R4 3227
24 TraesCS5D01G404700 chr3D 443418824 443421643 2819 True 543.525 1230 83.037500 1020 3695 4 chr3D.!!$R6 2675
25 TraesCS5D01G404700 chr3D 443294190 443295485 1295 True 232.000 281 82.674333 3050 4182 3 chr3D.!!$R2 1132

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.034896 GAAAGGTCTTGCCACGAGGA 59.965 55.0 1.86 0.0 40.61 3.71 F
165 166 0.109153 TGCATGCACTGTCCTTCTGT 59.891 50.0 18.46 0.0 0.00 3.41 F
335 336 0.176219 TTTACCGGTACATCCCGCTG 59.824 55.0 15.53 0.0 46.71 5.18 F
482 487 0.179137 CTGATGCTGGTGCTGCAATG 60.179 55.0 2.77 0.0 41.24 2.82 F
2262 3302 0.040499 GGTGGATGGTTAAGCCCCAA 59.960 55.0 14.82 0.0 35.14 4.12 F
3124 5337 0.112412 CCCACTAGCAACAGGGGTTT 59.888 55.0 1.17 0.0 37.40 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1469 2273 0.609131 ATTGTTCCACCAAGAGGGCG 60.609 55.000 0.0 0.0 42.05 6.13 R
1552 2386 2.975489 ACCACATCAAGTTCTGGTCTCT 59.025 45.455 0.0 0.0 30.85 3.10 R
2183 3223 2.808543 GGAGTGTGATGTGGACTTGAAC 59.191 50.000 0.0 0.0 0.00 3.18 R
2439 3578 2.419990 CGTCCAAGATGCAACCCTATCA 60.420 50.000 0.0 0.0 0.00 2.15 R
3412 13007 0.321919 TTCACAGCAGCTTGGCTAGG 60.322 55.000 0.0 0.0 43.68 3.02 R
4570 17126 0.037590 AAAACAGGAGCATACGGGCA 59.962 50.000 0.0 0.0 35.83 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.518634 TTGTTTGAAAGGTCTTGCCAC 57.481 42.857 0.00 0.00 40.61 5.01
21 22 1.403679 TGTTTGAAAGGTCTTGCCACG 59.596 47.619 0.00 0.00 40.61 4.94
22 23 1.673920 GTTTGAAAGGTCTTGCCACGA 59.326 47.619 0.00 0.00 40.61 4.35
23 24 1.593196 TTGAAAGGTCTTGCCACGAG 58.407 50.000 0.00 0.00 40.61 4.18
24 25 0.250295 TGAAAGGTCTTGCCACGAGG 60.250 55.000 0.00 0.00 40.61 4.63
25 26 0.034896 GAAAGGTCTTGCCACGAGGA 59.965 55.000 1.86 0.00 40.61 3.71
26 27 0.472471 AAAGGTCTTGCCACGAGGAA 59.528 50.000 1.86 0.00 40.61 3.36
27 28 0.693049 AAGGTCTTGCCACGAGGAAT 59.307 50.000 1.86 0.00 40.61 3.01
28 29 0.693049 AGGTCTTGCCACGAGGAATT 59.307 50.000 1.86 0.00 40.61 2.17
29 30 1.087501 GGTCTTGCCACGAGGAATTC 58.912 55.000 1.86 0.00 36.89 2.17
30 31 1.610624 GGTCTTGCCACGAGGAATTCA 60.611 52.381 7.93 0.00 36.89 2.57
31 32 2.151202 GTCTTGCCACGAGGAATTCAA 58.849 47.619 7.93 0.00 36.89 2.69
32 33 2.552315 GTCTTGCCACGAGGAATTCAAA 59.448 45.455 7.93 0.00 36.89 2.69
33 34 3.191371 GTCTTGCCACGAGGAATTCAAAT 59.809 43.478 7.93 0.00 36.89 2.32
34 35 4.394920 GTCTTGCCACGAGGAATTCAAATA 59.605 41.667 7.93 0.00 36.89 1.40
35 36 5.066505 GTCTTGCCACGAGGAATTCAAATAT 59.933 40.000 7.93 0.00 36.89 1.28
36 37 4.898829 TGCCACGAGGAATTCAAATATG 57.101 40.909 7.93 0.00 36.89 1.78
37 38 4.269183 TGCCACGAGGAATTCAAATATGT 58.731 39.130 7.93 0.00 36.89 2.29
38 39 5.432645 TGCCACGAGGAATTCAAATATGTA 58.567 37.500 7.93 0.00 36.89 2.29
39 40 5.883115 TGCCACGAGGAATTCAAATATGTAA 59.117 36.000 7.93 0.00 36.89 2.41
40 41 6.375736 TGCCACGAGGAATTCAAATATGTAAA 59.624 34.615 7.93 0.00 36.89 2.01
41 42 7.094162 TGCCACGAGGAATTCAAATATGTAAAA 60.094 33.333 7.93 0.00 36.89 1.52
42 43 7.757624 GCCACGAGGAATTCAAATATGTAAAAA 59.242 33.333 7.93 0.00 36.89 1.94
72 73 9.595357 GTTGAAAACGGAATTTTAGTCTAGAAG 57.405 33.333 0.00 0.00 40.73 2.85
73 74 9.550406 TTGAAAACGGAATTTTAGTCTAGAAGA 57.450 29.630 0.00 0.00 40.73 2.87
74 75 9.720769 TGAAAACGGAATTTTAGTCTAGAAGAT 57.279 29.630 0.00 0.00 40.73 2.40
115 116 9.700831 ATATCACTTAGAAATAAAAGGGTTGCT 57.299 29.630 0.00 0.00 0.00 3.91
116 117 7.833285 TCACTTAGAAATAAAAGGGTTGCTT 57.167 32.000 0.00 0.00 0.00 3.91
117 118 8.245195 TCACTTAGAAATAAAAGGGTTGCTTT 57.755 30.769 0.00 0.00 0.00 3.51
118 119 8.700973 TCACTTAGAAATAAAAGGGTTGCTTTT 58.299 29.630 0.00 0.00 37.68 2.27
119 120 9.325198 CACTTAGAAATAAAAGGGTTGCTTTTT 57.675 29.630 0.00 0.00 35.82 1.94
120 121 9.325198 ACTTAGAAATAAAAGGGTTGCTTTTTG 57.675 29.630 0.00 0.00 35.82 2.44
121 122 9.325198 CTTAGAAATAAAAGGGTTGCTTTTTGT 57.675 29.630 0.00 0.00 35.82 2.83
124 125 9.271828 AGAAATAAAAGGGTTGCTTTTTGTATG 57.728 29.630 0.00 0.00 35.82 2.39
125 126 7.977789 AATAAAAGGGTTGCTTTTTGTATGG 57.022 32.000 0.00 0.00 35.82 2.74
126 127 4.350368 AAAGGGTTGCTTTTTGTATGGG 57.650 40.909 0.00 0.00 0.00 4.00
127 128 3.252554 AGGGTTGCTTTTTGTATGGGA 57.747 42.857 0.00 0.00 0.00 4.37
128 129 3.165071 AGGGTTGCTTTTTGTATGGGAG 58.835 45.455 0.00 0.00 0.00 4.30
129 130 3.161866 GGGTTGCTTTTTGTATGGGAGA 58.838 45.455 0.00 0.00 0.00 3.71
130 131 3.193479 GGGTTGCTTTTTGTATGGGAGAG 59.807 47.826 0.00 0.00 0.00 3.20
131 132 3.193479 GGTTGCTTTTTGTATGGGAGAGG 59.807 47.826 0.00 0.00 0.00 3.69
132 133 4.079253 GTTGCTTTTTGTATGGGAGAGGA 58.921 43.478 0.00 0.00 0.00 3.71
133 134 4.380843 TGCTTTTTGTATGGGAGAGGAA 57.619 40.909 0.00 0.00 0.00 3.36
134 135 4.335416 TGCTTTTTGTATGGGAGAGGAAG 58.665 43.478 0.00 0.00 0.00 3.46
135 136 4.042809 TGCTTTTTGTATGGGAGAGGAAGA 59.957 41.667 0.00 0.00 0.00 2.87
136 137 5.010282 GCTTTTTGTATGGGAGAGGAAGAA 58.990 41.667 0.00 0.00 0.00 2.52
137 138 5.654209 GCTTTTTGTATGGGAGAGGAAGAAT 59.346 40.000 0.00 0.00 0.00 2.40
138 139 6.828785 GCTTTTTGTATGGGAGAGGAAGAATA 59.171 38.462 0.00 0.00 0.00 1.75
139 140 7.503902 GCTTTTTGTATGGGAGAGGAAGAATAT 59.496 37.037 0.00 0.00 0.00 1.28
144 145 9.447279 TTGTATGGGAGAGGAAGAATATAAAGA 57.553 33.333 0.00 0.00 0.00 2.52
145 146 9.447279 TGTATGGGAGAGGAAGAATATAAAGAA 57.553 33.333 0.00 0.00 0.00 2.52
148 149 7.227156 TGGGAGAGGAAGAATATAAAGAATGC 58.773 38.462 0.00 0.00 0.00 3.56
149 150 7.147320 TGGGAGAGGAAGAATATAAAGAATGCA 60.147 37.037 0.00 0.00 0.00 3.96
150 151 7.887495 GGGAGAGGAAGAATATAAAGAATGCAT 59.113 37.037 0.00 0.00 0.00 3.96
151 152 8.728833 GGAGAGGAAGAATATAAAGAATGCATG 58.271 37.037 0.00 0.00 0.00 4.06
152 153 8.108551 AGAGGAAGAATATAAAGAATGCATGC 57.891 34.615 11.82 11.82 0.00 4.06
153 154 7.722728 AGAGGAAGAATATAAAGAATGCATGCA 59.277 33.333 25.04 25.04 0.00 3.96
154 155 7.655490 AGGAAGAATATAAAGAATGCATGCAC 58.345 34.615 25.37 11.79 0.00 4.57
155 156 7.504911 AGGAAGAATATAAAGAATGCATGCACT 59.495 33.333 25.37 13.62 0.00 4.40
156 157 7.594015 GGAAGAATATAAAGAATGCATGCACTG 59.406 37.037 25.37 0.00 0.00 3.66
157 158 7.578310 AGAATATAAAGAATGCATGCACTGT 57.422 32.000 25.37 14.35 0.00 3.55
158 159 7.646314 AGAATATAAAGAATGCATGCACTGTC 58.354 34.615 25.37 19.87 0.00 3.51
159 160 4.644103 ATAAAGAATGCATGCACTGTCC 57.356 40.909 25.37 10.31 0.00 4.02
160 161 2.211250 AAGAATGCATGCACTGTCCT 57.789 45.000 25.37 12.47 0.00 3.85
161 162 2.211250 AGAATGCATGCACTGTCCTT 57.789 45.000 25.37 12.52 0.00 3.36
162 163 2.089980 AGAATGCATGCACTGTCCTTC 58.910 47.619 25.37 20.67 0.00 3.46
163 164 2.089980 GAATGCATGCACTGTCCTTCT 58.910 47.619 25.37 0.00 0.00 2.85
164 165 1.460504 ATGCATGCACTGTCCTTCTG 58.539 50.000 25.37 0.00 0.00 3.02
165 166 0.109153 TGCATGCACTGTCCTTCTGT 59.891 50.000 18.46 0.00 0.00 3.41
166 167 0.520404 GCATGCACTGTCCTTCTGTG 59.480 55.000 14.21 0.00 44.92 3.66
170 171 3.694364 CACTGTCCTTCTGTGCACT 57.306 52.632 19.41 0.00 38.68 4.40
171 172 1.506493 CACTGTCCTTCTGTGCACTC 58.494 55.000 19.41 0.00 38.68 3.51
172 173 1.069823 CACTGTCCTTCTGTGCACTCT 59.930 52.381 19.41 0.00 38.68 3.24
173 174 1.342819 ACTGTCCTTCTGTGCACTCTC 59.657 52.381 19.41 2.52 0.00 3.20
174 175 1.617850 CTGTCCTTCTGTGCACTCTCT 59.382 52.381 19.41 0.00 0.00 3.10
175 176 1.615883 TGTCCTTCTGTGCACTCTCTC 59.384 52.381 19.41 3.55 0.00 3.20
176 177 1.892474 GTCCTTCTGTGCACTCTCTCT 59.108 52.381 19.41 0.00 0.00 3.10
177 178 2.094752 GTCCTTCTGTGCACTCTCTCTC 60.095 54.545 19.41 0.58 0.00 3.20
178 179 1.204467 CCTTCTGTGCACTCTCTCTCC 59.796 57.143 19.41 0.00 0.00 3.71
179 180 1.204467 CTTCTGTGCACTCTCTCTCCC 59.796 57.143 19.41 0.00 0.00 4.30
180 181 0.407528 TCTGTGCACTCTCTCTCCCT 59.592 55.000 19.41 0.00 0.00 4.20
181 182 0.817013 CTGTGCACTCTCTCTCCCTC 59.183 60.000 19.41 0.00 0.00 4.30
182 183 0.407528 TGTGCACTCTCTCTCCCTCT 59.592 55.000 19.41 0.00 0.00 3.69
183 184 1.203112 TGTGCACTCTCTCTCCCTCTT 60.203 52.381 19.41 0.00 0.00 2.85
184 185 1.899142 GTGCACTCTCTCTCCCTCTTT 59.101 52.381 10.32 0.00 0.00 2.52
185 186 2.094234 GTGCACTCTCTCTCCCTCTTTC 60.094 54.545 10.32 0.00 0.00 2.62
186 187 1.480545 GCACTCTCTCTCCCTCTTTCC 59.519 57.143 0.00 0.00 0.00 3.13
187 188 2.888069 GCACTCTCTCTCCCTCTTTCCT 60.888 54.545 0.00 0.00 0.00 3.36
188 189 2.760092 CACTCTCTCTCCCTCTTTCCTG 59.240 54.545 0.00 0.00 0.00 3.86
189 190 2.652348 ACTCTCTCTCCCTCTTTCCTGA 59.348 50.000 0.00 0.00 0.00 3.86
190 191 3.023832 CTCTCTCTCCCTCTTTCCTGAC 58.976 54.545 0.00 0.00 0.00 3.51
191 192 2.380249 TCTCTCTCCCTCTTTCCTGACA 59.620 50.000 0.00 0.00 0.00 3.58
192 193 3.169099 CTCTCTCCCTCTTTCCTGACAA 58.831 50.000 0.00 0.00 0.00 3.18
193 194 3.580458 CTCTCTCCCTCTTTCCTGACAAA 59.420 47.826 0.00 0.00 0.00 2.83
194 195 3.973973 TCTCTCCCTCTTTCCTGACAAAA 59.026 43.478 0.00 0.00 0.00 2.44
195 196 4.412199 TCTCTCCCTCTTTCCTGACAAAAA 59.588 41.667 0.00 0.00 0.00 1.94
196 197 4.461198 TCTCCCTCTTTCCTGACAAAAAC 58.539 43.478 0.00 0.00 0.00 2.43
197 198 4.166144 TCTCCCTCTTTCCTGACAAAAACT 59.834 41.667 0.00 0.00 0.00 2.66
198 199 4.207165 TCCCTCTTTCCTGACAAAAACTG 58.793 43.478 0.00 0.00 0.00 3.16
199 200 4.080015 TCCCTCTTTCCTGACAAAAACTGA 60.080 41.667 0.00 0.00 0.00 3.41
200 201 4.036852 CCCTCTTTCCTGACAAAAACTGAC 59.963 45.833 0.00 0.00 0.00 3.51
201 202 4.640201 CCTCTTTCCTGACAAAAACTGACA 59.360 41.667 0.00 0.00 0.00 3.58
202 203 5.300286 CCTCTTTCCTGACAAAAACTGACAT 59.700 40.000 0.00 0.00 0.00 3.06
203 204 6.135290 TCTTTCCTGACAAAAACTGACATG 57.865 37.500 0.00 0.00 0.00 3.21
204 205 3.988379 TCCTGACAAAAACTGACATGC 57.012 42.857 0.00 0.00 0.00 4.06
205 206 3.286353 TCCTGACAAAAACTGACATGCA 58.714 40.909 0.00 0.00 0.00 3.96
206 207 3.066621 TCCTGACAAAAACTGACATGCAC 59.933 43.478 0.00 0.00 0.00 4.57
207 208 3.374745 CTGACAAAAACTGACATGCACC 58.625 45.455 0.00 0.00 0.00 5.01
208 209 2.757314 TGACAAAAACTGACATGCACCA 59.243 40.909 0.00 0.00 0.00 4.17
209 210 3.181488 TGACAAAAACTGACATGCACCAG 60.181 43.478 10.08 10.08 36.53 4.00
210 211 2.101249 ACAAAAACTGACATGCACCAGG 59.899 45.455 14.57 0.00 34.85 4.45
211 212 0.675633 AAAACTGACATGCACCAGGC 59.324 50.000 14.57 0.18 45.13 4.85
222 223 2.262572 GCACCAGGCGTATTCTTTTG 57.737 50.000 0.00 0.00 0.00 2.44
223 224 1.539827 GCACCAGGCGTATTCTTTTGT 59.460 47.619 0.00 0.00 0.00 2.83
224 225 2.745281 GCACCAGGCGTATTCTTTTGTA 59.255 45.455 0.00 0.00 0.00 2.41
225 226 3.377172 GCACCAGGCGTATTCTTTTGTAT 59.623 43.478 0.00 0.00 0.00 2.29
226 227 4.142469 GCACCAGGCGTATTCTTTTGTATT 60.142 41.667 0.00 0.00 0.00 1.89
227 228 5.331902 CACCAGGCGTATTCTTTTGTATTG 58.668 41.667 0.00 0.00 0.00 1.90
228 229 5.123186 CACCAGGCGTATTCTTTTGTATTGA 59.877 40.000 0.00 0.00 0.00 2.57
229 230 5.885912 ACCAGGCGTATTCTTTTGTATTGAT 59.114 36.000 0.00 0.00 0.00 2.57
230 231 6.377146 ACCAGGCGTATTCTTTTGTATTGATT 59.623 34.615 0.00 0.00 0.00 2.57
231 232 6.912591 CCAGGCGTATTCTTTTGTATTGATTC 59.087 38.462 0.00 0.00 0.00 2.52
232 233 6.912591 CAGGCGTATTCTTTTGTATTGATTCC 59.087 38.462 0.00 0.00 0.00 3.01
233 234 6.828785 AGGCGTATTCTTTTGTATTGATTCCT 59.171 34.615 0.00 0.00 0.00 3.36
234 235 7.339466 AGGCGTATTCTTTTGTATTGATTCCTT 59.661 33.333 0.00 0.00 0.00 3.36
235 236 7.973944 GGCGTATTCTTTTGTATTGATTCCTTT 59.026 33.333 0.00 0.00 0.00 3.11
236 237 9.997482 GCGTATTCTTTTGTATTGATTCCTTTA 57.003 29.630 0.00 0.00 0.00 1.85
271 272 9.733219 AACTCTCTTTATAACTCACTTATACGC 57.267 33.333 0.00 0.00 28.55 4.42
272 273 8.900781 ACTCTCTTTATAACTCACTTATACGCA 58.099 33.333 0.00 0.00 28.55 5.24
273 274 9.388346 CTCTCTTTATAACTCACTTATACGCAG 57.612 37.037 0.00 0.00 28.55 5.18
274 275 9.117183 TCTCTTTATAACTCACTTATACGCAGA 57.883 33.333 0.00 0.00 28.55 4.26
275 276 9.731819 CTCTTTATAACTCACTTATACGCAGAA 57.268 33.333 0.00 0.00 28.55 3.02
279 280 7.988904 ATAACTCACTTATACGCAGAAAGAC 57.011 36.000 0.00 0.00 0.00 3.01
280 281 5.386958 ACTCACTTATACGCAGAAAGACA 57.613 39.130 0.00 0.00 0.00 3.41
281 282 5.403246 ACTCACTTATACGCAGAAAGACAG 58.597 41.667 0.00 0.00 0.00 3.51
282 283 4.174009 TCACTTATACGCAGAAAGACAGC 58.826 43.478 0.00 0.00 0.00 4.40
283 284 3.926527 CACTTATACGCAGAAAGACAGCA 59.073 43.478 0.00 0.00 0.00 4.41
284 285 3.927142 ACTTATACGCAGAAAGACAGCAC 59.073 43.478 0.00 0.00 0.00 4.40
285 286 1.350193 ATACGCAGAAAGACAGCACG 58.650 50.000 0.00 0.00 0.00 5.34
286 287 1.282248 TACGCAGAAAGACAGCACGC 61.282 55.000 0.00 0.00 0.00 5.34
287 288 2.597713 CGCAGAAAGACAGCACGCA 61.598 57.895 0.00 0.00 0.00 5.24
288 289 1.871772 GCAGAAAGACAGCACGCAT 59.128 52.632 0.00 0.00 0.00 4.73
289 290 0.179205 GCAGAAAGACAGCACGCATC 60.179 55.000 0.00 0.00 0.00 3.91
290 291 1.436600 CAGAAAGACAGCACGCATCT 58.563 50.000 0.00 0.00 0.00 2.90
291 292 1.802960 CAGAAAGACAGCACGCATCTT 59.197 47.619 3.46 3.46 34.11 2.40
292 293 1.802960 AGAAAGACAGCACGCATCTTG 59.197 47.619 8.74 0.00 33.01 3.02
293 294 1.800586 GAAAGACAGCACGCATCTTGA 59.199 47.619 8.74 0.00 33.01 3.02
294 295 1.436600 AAGACAGCACGCATCTTGAG 58.563 50.000 7.53 0.00 31.47 3.02
295 296 1.018226 AGACAGCACGCATCTTGAGC 61.018 55.000 0.00 0.00 0.00 4.26
296 297 1.293963 GACAGCACGCATCTTGAGCA 61.294 55.000 0.00 0.00 0.00 4.26
297 298 0.886043 ACAGCACGCATCTTGAGCAA 60.886 50.000 0.00 0.00 0.00 3.91
298 299 0.239082 CAGCACGCATCTTGAGCAAA 59.761 50.000 0.00 0.00 0.00 3.68
299 300 1.135489 CAGCACGCATCTTGAGCAAAT 60.135 47.619 0.00 0.00 0.00 2.32
300 301 1.542915 AGCACGCATCTTGAGCAAATT 59.457 42.857 0.00 0.00 0.00 1.82
301 302 1.652124 GCACGCATCTTGAGCAAATTG 59.348 47.619 0.00 0.00 0.00 2.32
302 303 1.652124 CACGCATCTTGAGCAAATTGC 59.348 47.619 10.41 10.41 45.46 3.56
311 312 4.500396 GCAAATTGCGGATGGTGG 57.500 55.556 0.90 0.00 31.71 4.61
312 313 1.889454 GCAAATTGCGGATGGTGGA 59.111 52.632 0.90 0.00 31.71 4.02
313 314 0.461135 GCAAATTGCGGATGGTGGAT 59.539 50.000 0.90 0.00 31.71 3.41
314 315 1.536709 GCAAATTGCGGATGGTGGATC 60.537 52.381 0.90 0.00 31.71 3.36
315 316 1.067516 CAAATTGCGGATGGTGGATCC 59.932 52.381 4.20 4.20 46.82 3.36
322 323 2.256117 GGATGGTGGATCCTTTACCG 57.744 55.000 14.23 0.00 46.77 4.02
323 324 1.202770 GGATGGTGGATCCTTTACCGG 60.203 57.143 14.23 0.00 46.77 5.28
324 325 1.489230 GATGGTGGATCCTTTACCGGT 59.511 52.381 13.98 13.98 37.29 5.28
325 326 2.250921 TGGTGGATCCTTTACCGGTA 57.749 50.000 11.16 11.16 37.29 4.02
326 327 1.832998 TGGTGGATCCTTTACCGGTAC 59.167 52.381 15.53 1.16 37.29 3.34
327 328 1.832998 GGTGGATCCTTTACCGGTACA 59.167 52.381 15.53 7.13 0.00 2.90
328 329 2.436911 GGTGGATCCTTTACCGGTACAT 59.563 50.000 15.53 3.97 0.00 2.29
329 330 3.493873 GGTGGATCCTTTACCGGTACATC 60.494 52.174 15.53 12.76 0.00 3.06
330 331 2.701951 TGGATCCTTTACCGGTACATCC 59.298 50.000 22.99 22.99 0.00 3.51
331 332 2.038164 GGATCCTTTACCGGTACATCCC 59.962 54.545 15.53 7.45 0.00 3.85
333 334 0.531311 CCTTTACCGGTACATCCCGC 60.531 60.000 15.53 0.00 46.71 6.13
334 335 0.462789 CTTTACCGGTACATCCCGCT 59.537 55.000 15.53 0.00 46.71 5.52
335 336 0.176219 TTTACCGGTACATCCCGCTG 59.824 55.000 15.53 0.00 46.71 5.18
336 337 2.300850 TTACCGGTACATCCCGCTGC 62.301 60.000 15.53 0.00 46.71 5.25
337 338 4.910585 CCGGTACATCCCGCTGCC 62.911 72.222 0.00 0.00 46.71 4.85
361 362 2.352503 AAAAATGCAATTCGCGAGCT 57.647 40.000 18.07 4.02 46.97 4.09
362 363 1.900237 AAAATGCAATTCGCGAGCTC 58.100 45.000 18.07 2.73 46.97 4.09
363 364 1.089920 AAATGCAATTCGCGAGCTCT 58.910 45.000 18.07 4.87 46.97 4.09
364 365 0.654683 AATGCAATTCGCGAGCTCTC 59.345 50.000 18.07 2.14 46.97 3.20
365 366 1.156645 ATGCAATTCGCGAGCTCTCC 61.157 55.000 18.07 1.49 46.97 3.71
366 367 2.864931 GCAATTCGCGAGCTCTCCG 61.865 63.158 9.59 14.14 0.00 4.63
376 377 2.125753 GCTCTCCGCTGTCCACTG 60.126 66.667 0.00 0.00 35.14 3.66
377 378 2.575993 CTCTCCGCTGTCCACTGG 59.424 66.667 0.00 0.00 0.00 4.00
378 379 2.203640 TCTCCGCTGTCCACTGGT 60.204 61.111 0.00 0.00 0.00 4.00
379 380 2.219325 CTCTCCGCTGTCCACTGGTC 62.219 65.000 0.00 0.00 0.00 4.02
380 381 3.633094 CTCCGCTGTCCACTGGTCG 62.633 68.421 0.00 0.00 0.00 4.79
381 382 3.991051 CCGCTGTCCACTGGTCGT 61.991 66.667 0.00 0.00 0.00 4.34
382 383 2.029073 CGCTGTCCACTGGTCGTT 59.971 61.111 0.00 0.00 0.00 3.85
383 384 1.594293 CGCTGTCCACTGGTCGTTT 60.594 57.895 0.00 0.00 0.00 3.60
384 385 1.557443 CGCTGTCCACTGGTCGTTTC 61.557 60.000 0.00 0.00 0.00 2.78
385 386 1.228657 GCTGTCCACTGGTCGTTTCC 61.229 60.000 0.00 0.00 0.00 3.13
386 387 0.944311 CTGTCCACTGGTCGTTTCCG 60.944 60.000 0.00 0.00 0.00 4.30
387 388 2.029964 TCCACTGGTCGTTTCCGC 59.970 61.111 0.00 0.00 0.00 5.54
388 389 2.280524 CCACTGGTCGTTTCCGCA 60.281 61.111 0.00 0.00 0.00 5.69
389 390 2.317609 CCACTGGTCGTTTCCGCAG 61.318 63.158 0.00 0.00 32.52 5.18
394 395 2.665185 GTCGTTTCCGCAGTGCCT 60.665 61.111 10.11 0.00 0.00 4.75
399 400 2.250939 TTTCCGCAGTGCCTGTTCG 61.251 57.895 10.11 0.00 33.43 3.95
456 457 1.617263 CGAGAACCTGGAGAAGAGGGA 60.617 57.143 0.00 0.00 34.56 4.20
471 472 1.748122 GGGACAGGTGCTGATGCTG 60.748 63.158 0.00 0.00 40.48 4.41
472 473 1.748122 GGACAGGTGCTGATGCTGG 60.748 63.158 0.00 0.00 40.48 4.85
473 474 1.002868 GACAGGTGCTGATGCTGGT 60.003 57.895 0.00 0.00 40.48 4.00
474 475 1.303074 ACAGGTGCTGATGCTGGTG 60.303 57.895 0.00 0.00 40.48 4.17
475 476 2.360852 AGGTGCTGATGCTGGTGC 60.361 61.111 0.00 0.00 40.48 5.01
477 482 2.697761 GGTGCTGATGCTGGTGCTG 61.698 63.158 0.00 0.00 40.48 4.41
479 484 3.060000 GCTGATGCTGGTGCTGCA 61.060 61.111 0.00 0.00 42.03 4.41
482 487 0.179137 CTGATGCTGGTGCTGCAATG 60.179 55.000 2.77 0.00 41.24 2.82
485 490 3.379445 GCTGGTGCTGCAATGCCT 61.379 61.111 2.77 0.00 36.03 4.75
523 528 1.825090 TTTATGCACAGCCAGTCCTG 58.175 50.000 0.00 0.00 38.78 3.86
524 529 0.677731 TTATGCACAGCCAGTCCTGC 60.678 55.000 0.00 0.00 36.29 4.85
529 534 1.072159 ACAGCCAGTCCTGCTCAAC 59.928 57.895 0.00 0.00 36.81 3.18
536 541 2.119611 TCCTGCTCAACTCGGGGA 59.880 61.111 0.00 0.00 0.00 4.81
538 543 0.909610 TCCTGCTCAACTCGGGGAAT 60.910 55.000 0.00 0.00 0.00 3.01
540 545 1.089920 CTGCTCAACTCGGGGAATTG 58.910 55.000 0.00 0.00 0.00 2.32
551 562 7.666388 TCAACTCGGGGAATTGTATTTTCTAAA 59.334 33.333 0.00 0.00 0.00 1.85
552 563 8.301002 CAACTCGGGGAATTGTATTTTCTAAAA 58.699 33.333 0.00 0.00 0.00 1.52
553 564 8.589701 ACTCGGGGAATTGTATTTTCTAAAAT 57.410 30.769 6.00 6.00 41.24 1.82
557 568 9.228636 CGGGGAATTGTATTTTCTAAAATAACG 57.771 33.333 8.97 0.00 41.14 3.18
558 569 9.027129 GGGGAATTGTATTTTCTAAAATAACGC 57.973 33.333 8.97 7.34 41.14 4.84
569 581 7.418840 TTCTAAAATAACGCGGTGTCTTTTA 57.581 32.000 7.07 13.10 31.57 1.52
581 593 5.569413 CGGTGTCTTTTATTAATCTGTGCC 58.431 41.667 0.00 0.00 0.00 5.01
583 595 6.348950 CGGTGTCTTTTATTAATCTGTGCCAA 60.349 38.462 0.00 0.00 0.00 4.52
585 597 6.806739 GTGTCTTTTATTAATCTGTGCCAACC 59.193 38.462 0.00 0.00 0.00 3.77
586 598 6.491745 TGTCTTTTATTAATCTGTGCCAACCA 59.508 34.615 0.00 0.00 0.00 3.67
590 602 2.093306 TAATCTGTGCCAACCACTCG 57.907 50.000 0.00 0.00 44.92 4.18
594 606 0.949105 CTGTGCCAACCACTCGTACC 60.949 60.000 0.00 0.00 44.92 3.34
603 615 0.809385 CCACTCGTACCGATCTGTGT 59.191 55.000 0.00 0.00 34.61 3.72
614 626 5.215252 ACCGATCTGTGTTTATCCATAGG 57.785 43.478 0.00 0.00 0.00 2.57
623 639 9.104713 TCTGTGTTTATCCATAGGATACATGAT 57.895 33.333 0.00 0.00 43.46 2.45
636 652 5.657745 AGGATACATGATGCATTTGTCCAAA 59.342 36.000 16.70 3.73 35.31 3.28
637 653 6.154877 AGGATACATGATGCATTTGTCCAAAA 59.845 34.615 16.70 3.43 35.31 2.44
638 654 6.817641 GGATACATGATGCATTTGTCCAAAAA 59.182 34.615 16.70 2.84 33.81 1.94
678 704 0.538287 GCTGAAGGGGCAGTTGAACT 60.538 55.000 0.00 0.00 38.17 3.01
707 733 4.854784 GCGAGCCGATCACGAGCA 62.855 66.667 0.00 0.00 42.66 4.26
709 735 2.959071 GAGCCGATCACGAGCAGC 60.959 66.667 0.00 0.00 42.66 5.25
744 770 3.971702 AGCACCCAAGACCCAGGC 61.972 66.667 0.00 0.00 0.00 4.85
749 775 1.774254 CACCCAAGACCCAGGCATATA 59.226 52.381 0.00 0.00 0.00 0.86
751 777 3.587061 CACCCAAGACCCAGGCATATATA 59.413 47.826 0.00 0.00 0.00 0.86
823 860 1.383456 AACGTGCAGGCACACATTGT 61.383 50.000 22.69 10.10 46.47 2.71
824 861 0.533978 ACGTGCAGGCACACATTGTA 60.534 50.000 22.69 0.00 46.47 2.41
847 903 1.019673 CTGCACATATCCACACCAGC 58.980 55.000 0.00 0.00 0.00 4.85
850 906 1.959042 CACATATCCACACCAGCTCC 58.041 55.000 0.00 0.00 0.00 4.70
937 1047 6.038050 GCTGTTGAGATTATTCCTCTTTCTGG 59.962 42.308 0.00 0.00 0.00 3.86
957 1067 5.068723 TCTGGTACATAAATCTTCTCCGGAC 59.931 44.000 0.00 0.00 38.20 4.79
959 1069 4.037208 GGTACATAAATCTTCTCCGGACGA 59.963 45.833 0.00 0.00 0.00 4.20
961 1072 4.683832 ACATAAATCTTCTCCGGACGAAG 58.316 43.478 25.57 25.57 39.32 3.79
1049 1179 0.676151 CTCTTGCTGTTCCTCTGGGC 60.676 60.000 0.00 0.00 0.00 5.36
1200 1405 2.156117 TGCTTATTTCGTCGTCCGTTTG 59.844 45.455 0.00 0.00 37.94 2.93
1211 1416 3.911964 GTCGTCCGTTTGATCAATTTTGG 59.088 43.478 9.40 8.93 0.00 3.28
1299 1511 3.480470 CAGTTGGGACACTTTCACTCAT 58.520 45.455 0.00 0.00 39.29 2.90
1311 1523 3.500448 TTCACTCATGCAGGTTGGTTA 57.500 42.857 0.00 0.00 0.00 2.85
1344 1830 3.819368 TGTTTGTGAAATCTGCCTCTGA 58.181 40.909 0.00 0.00 0.00 3.27
1429 1944 2.744202 ACCTCGAGCAATTTGTGATCAC 59.256 45.455 19.27 19.27 43.14 3.06
1437 2229 6.165700 AGCAATTTGTGATCACTTTTCCTT 57.834 33.333 25.55 8.66 0.00 3.36
1469 2273 4.090761 TGAGTGGATATTTGGGATGAGC 57.909 45.455 0.00 0.00 0.00 4.26
1509 2318 7.483307 ACAATTTACACAGCTAGCATTTATGG 58.517 34.615 18.83 3.06 0.00 2.74
1552 2386 7.643569 TTCAGAGAAATTATTGGCAATAGCA 57.356 32.000 18.52 7.02 44.61 3.49
1553 2387 7.268199 TCAGAGAAATTATTGGCAATAGCAG 57.732 36.000 18.52 6.22 44.61 4.24
1594 2439 3.448093 TGACCAATCACATTTAGGCCA 57.552 42.857 5.01 0.00 0.00 5.36
1595 2440 3.772387 TGACCAATCACATTTAGGCCAA 58.228 40.909 5.01 0.00 0.00 4.52
1596 2441 4.352009 TGACCAATCACATTTAGGCCAAT 58.648 39.130 5.01 0.00 0.00 3.16
1597 2442 4.776837 TGACCAATCACATTTAGGCCAATT 59.223 37.500 5.01 0.00 0.00 2.32
1598 2443 5.248020 TGACCAATCACATTTAGGCCAATTT 59.752 36.000 5.01 0.00 0.00 1.82
1599 2444 6.125589 ACCAATCACATTTAGGCCAATTTT 57.874 33.333 5.01 0.00 0.00 1.82
1600 2445 6.541907 ACCAATCACATTTAGGCCAATTTTT 58.458 32.000 5.01 0.00 0.00 1.94
1873 2836 4.225942 TCAAGGCTCATTCCAAGTACAGAT 59.774 41.667 0.00 0.00 0.00 2.90
2035 3021 4.697514 GAGCTAGTGAATCATGGCAAGTA 58.302 43.478 0.00 0.00 0.00 2.24
2036 3022 5.301835 AGCTAGTGAATCATGGCAAGTAT 57.698 39.130 0.00 0.00 0.00 2.12
2037 3023 5.688807 AGCTAGTGAATCATGGCAAGTATT 58.311 37.500 0.00 0.00 0.00 1.89
2038 3024 6.830912 AGCTAGTGAATCATGGCAAGTATTA 58.169 36.000 0.00 0.00 0.00 0.98
2096 3085 5.295787 TGCAATCGGTTGTTAGATTCATACC 59.704 40.000 10.66 0.00 37.65 2.73
2183 3223 2.563179 CTCCGTGGTATTATCCCAGGAG 59.437 54.545 7.50 7.50 39.62 3.69
2262 3302 0.040499 GGTGGATGGTTAAGCCCCAA 59.960 55.000 14.82 0.00 35.14 4.12
2439 3578 2.031870 GTTTGCTTCAGGGAGTTTGGT 58.968 47.619 0.00 0.00 0.00 3.67
2618 3757 6.065976 TCATAATACCCTTATGGCTCATGG 57.934 41.667 0.00 0.00 37.83 3.66
3033 5246 2.092861 TCCACCCTTCACGAAAGTTCAA 60.093 45.455 0.00 0.00 46.40 2.69
3108 5321 1.067060 CTCTACGTGAATGATCGCCCA 59.933 52.381 0.00 0.00 32.24 5.36
3120 5333 2.257409 ATCGCCCACTAGCAACAGGG 62.257 60.000 0.00 0.00 44.37 4.45
3124 5337 0.112412 CCCACTAGCAACAGGGGTTT 59.888 55.000 1.17 0.00 37.40 3.27
3208 9356 7.549134 TGATACTAGGATTGTTGTTAACTGCTG 59.451 37.037 7.22 0.00 0.00 4.41
3245 10659 2.674357 GTGGATGTGCAATTTGATTGGC 59.326 45.455 0.00 0.00 40.57 4.52
3285 10702 8.980481 TTTTCTAGGACATTTATTCTCCATCC 57.020 34.615 0.00 0.00 0.00 3.51
3371 10795 2.360801 AGCAACGGTTACACAAGCAAAT 59.639 40.909 0.00 0.00 32.26 2.32
3383 10807 4.706962 ACACAAGCAAATAAGGAGATTCCC 59.293 41.667 0.00 0.00 37.19 3.97
3497 13292 3.424703 ACATTTCCAGATTCACCAGTGG 58.575 45.455 7.91 7.91 0.00 4.00
3789 13784 3.994392 ACGCACATCCGTTGGATTATATC 59.006 43.478 0.00 0.00 39.79 1.63
3831 13838 9.372369 CTTCAGGAGATTAGAAAAGAAATACGT 57.628 33.333 0.00 0.00 0.00 3.57
3832 13839 8.703604 TCAGGAGATTAGAAAAGAAATACGTG 57.296 34.615 0.00 0.00 0.00 4.49
3834 13841 6.539103 AGGAGATTAGAAAAGAAATACGTGCC 59.461 38.462 0.00 0.00 0.00 5.01
3845 13856 5.716094 AGAAATACGTGCCCATTAAAAACC 58.284 37.500 0.00 0.00 0.00 3.27
3865 13876 2.731976 CCGATACCGAAAGCTTGATAGC 59.268 50.000 0.00 0.00 42.35 2.97
4030 14047 1.039856 TTCCCAACCAGAAGCAAAGC 58.960 50.000 0.00 0.00 0.00 3.51
4032 14049 0.829182 CCCAACCAGAAGCAAAGCCT 60.829 55.000 0.00 0.00 0.00 4.58
4033 14050 0.600057 CCAACCAGAAGCAAAGCCTC 59.400 55.000 0.00 0.00 0.00 4.70
4034 14051 1.613836 CAACCAGAAGCAAAGCCTCT 58.386 50.000 0.00 0.00 28.30 3.69
4035 14052 1.268899 CAACCAGAAGCAAAGCCTCTG 59.731 52.381 9.97 9.97 44.11 3.35
4049 14076 3.930634 GCCTCTGCTGAAGAACAAATT 57.069 42.857 0.00 0.00 33.37 1.82
4146 14441 3.995809 TAGGGTCGGCTTCCTGGGG 62.996 68.421 0.00 0.00 34.75 4.96
4153 14448 2.501610 GCTTCCTGGGGAGCTACG 59.498 66.667 12.39 0.00 31.21 3.51
4201 14523 2.030274 TGCTCGGGATCACATACATACG 60.030 50.000 0.00 0.00 0.00 3.06
4232 15030 3.321682 TGGGACAGAAGGAAAATTGCTTG 59.678 43.478 4.56 0.00 39.04 4.01
4234 15032 4.522789 GGGACAGAAGGAAAATTGCTTGTA 59.477 41.667 4.56 0.00 39.04 2.41
4248 15062 2.094026 TGCTTGTATCGTGATGCTCTGT 60.094 45.455 0.00 0.00 0.00 3.41
4271 16801 3.583806 TGTTTGTTTGTTGTGCAGGAAG 58.416 40.909 0.00 0.00 0.00 3.46
4308 16838 1.752501 CTACTTCGCGTGGGCATTCG 61.753 60.000 5.77 0.00 39.92 3.34
4471 17004 2.202703 CGTTTCTAGGACGGCGGG 60.203 66.667 13.24 0.00 36.90 6.13
4506 17039 3.978723 CTGAGCGCCGTGTCCTGAG 62.979 68.421 2.29 0.00 0.00 3.35
4520 17059 3.895232 TCCTGAGTTGCTAATCTGGAC 57.105 47.619 17.36 0.00 38.28 4.02
4521 17060 3.445008 TCCTGAGTTGCTAATCTGGACT 58.555 45.455 17.36 0.00 38.28 3.85
4522 17061 4.610333 TCCTGAGTTGCTAATCTGGACTA 58.390 43.478 17.36 0.00 38.28 2.59
4523 17062 5.211973 TCCTGAGTTGCTAATCTGGACTAT 58.788 41.667 17.36 0.00 38.28 2.12
4524 17063 5.069648 TCCTGAGTTGCTAATCTGGACTATG 59.930 44.000 17.36 0.00 38.28 2.23
4525 17064 5.282055 TGAGTTGCTAATCTGGACTATGG 57.718 43.478 0.00 0.00 0.00 2.74
4526 17065 4.962362 TGAGTTGCTAATCTGGACTATGGA 59.038 41.667 0.00 0.00 0.00 3.41
4579 17135 1.137404 GTGCTTGCTTGCCCGTATG 59.863 57.895 0.00 0.00 0.00 2.39
4580 17136 2.102946 GCTTGCTTGCCCGTATGC 59.897 61.111 0.00 0.00 0.00 3.14
4581 17137 2.409870 GCTTGCTTGCCCGTATGCT 61.410 57.895 0.00 0.00 0.00 3.79
4582 17138 1.723870 CTTGCTTGCCCGTATGCTC 59.276 57.895 0.00 0.00 0.00 4.26
4583 17139 1.718757 CTTGCTTGCCCGTATGCTCC 61.719 60.000 0.00 0.00 0.00 4.70
4584 17140 2.190578 GCTTGCCCGTATGCTCCT 59.809 61.111 0.00 0.00 0.00 3.69
4585 17141 2.182842 GCTTGCCCGTATGCTCCTG 61.183 63.158 0.00 0.00 0.00 3.86
4586 17142 1.221840 CTTGCCCGTATGCTCCTGT 59.778 57.895 0.00 0.00 0.00 4.00
4589 17145 0.037590 TGCCCGTATGCTCCTGTTTT 59.962 50.000 0.00 0.00 0.00 2.43
4823 18040 4.016444 TCAAAATGATGAAGGGGTGCTAC 58.984 43.478 0.00 0.00 0.00 3.58
5189 18616 0.969894 CACCGTGGAAGAAGGACTCT 59.030 55.000 0.00 0.00 35.13 3.24
5289 19015 2.093869 GCAACCAAAGCATCACATCCAT 60.094 45.455 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.034896 TCCTCGTGGCAAGACCTTTC 59.965 55.000 0.00 0.00 40.22 2.62
7 8 0.472471 TTCCTCGTGGCAAGACCTTT 59.528 50.000 0.00 0.00 40.22 3.11
8 9 0.693049 ATTCCTCGTGGCAAGACCTT 59.307 50.000 0.00 0.00 40.22 3.50
9 10 0.693049 AATTCCTCGTGGCAAGACCT 59.307 50.000 0.00 0.00 40.22 3.85
10 11 1.087501 GAATTCCTCGTGGCAAGACC 58.912 55.000 0.00 0.00 39.84 3.85
11 12 1.808411 TGAATTCCTCGTGGCAAGAC 58.192 50.000 2.27 0.00 0.00 3.01
12 13 2.559698 TTGAATTCCTCGTGGCAAGA 57.440 45.000 2.27 2.52 0.00 3.02
13 14 3.855689 ATTTGAATTCCTCGTGGCAAG 57.144 42.857 2.27 0.00 0.00 4.01
14 15 4.704540 ACATATTTGAATTCCTCGTGGCAA 59.295 37.500 2.27 0.00 0.00 4.52
15 16 4.269183 ACATATTTGAATTCCTCGTGGCA 58.731 39.130 2.27 0.00 0.00 4.92
16 17 4.900635 ACATATTTGAATTCCTCGTGGC 57.099 40.909 2.27 0.00 0.00 5.01
41 42 9.647797 AGACTAAAATTCCGTTTTCAACTTTTT 57.352 25.926 0.00 0.00 40.40 1.94
43 44 9.946165 CTAGACTAAAATTCCGTTTTCAACTTT 57.054 29.630 0.00 0.00 40.40 2.66
44 45 9.333724 TCTAGACTAAAATTCCGTTTTCAACTT 57.666 29.630 0.00 0.00 40.40 2.66
45 46 8.897872 TCTAGACTAAAATTCCGTTTTCAACT 57.102 30.769 0.00 0.00 40.40 3.16
46 47 9.595357 CTTCTAGACTAAAATTCCGTTTTCAAC 57.405 33.333 0.00 0.00 40.40 3.18
47 48 9.550406 TCTTCTAGACTAAAATTCCGTTTTCAA 57.450 29.630 0.00 0.00 40.40 2.69
48 49 9.720769 ATCTTCTAGACTAAAATTCCGTTTTCA 57.279 29.630 0.00 0.00 40.40 2.69
89 90 9.700831 AGCAACCCTTTTATTTCTAAGTGATAT 57.299 29.630 0.00 0.00 0.00 1.63
90 91 9.528489 AAGCAACCCTTTTATTTCTAAGTGATA 57.472 29.630 0.00 0.00 0.00 2.15
91 92 8.422577 AAGCAACCCTTTTATTTCTAAGTGAT 57.577 30.769 0.00 0.00 0.00 3.06
92 93 7.833285 AAGCAACCCTTTTATTTCTAAGTGA 57.167 32.000 0.00 0.00 0.00 3.41
105 106 3.970640 TCCCATACAAAAAGCAACCCTTT 59.029 39.130 0.00 0.00 45.49 3.11
106 107 3.578282 CTCCCATACAAAAAGCAACCCTT 59.422 43.478 0.00 0.00 34.51 3.95
107 108 3.165071 CTCCCATACAAAAAGCAACCCT 58.835 45.455 0.00 0.00 0.00 4.34
108 109 3.161866 TCTCCCATACAAAAAGCAACCC 58.838 45.455 0.00 0.00 0.00 4.11
109 110 3.193479 CCTCTCCCATACAAAAAGCAACC 59.807 47.826 0.00 0.00 0.00 3.77
110 111 4.079253 TCCTCTCCCATACAAAAAGCAAC 58.921 43.478 0.00 0.00 0.00 4.17
111 112 4.380843 TCCTCTCCCATACAAAAAGCAA 57.619 40.909 0.00 0.00 0.00 3.91
112 113 4.042809 TCTTCCTCTCCCATACAAAAAGCA 59.957 41.667 0.00 0.00 0.00 3.91
113 114 4.589908 TCTTCCTCTCCCATACAAAAAGC 58.410 43.478 0.00 0.00 0.00 3.51
114 115 8.986929 ATATTCTTCCTCTCCCATACAAAAAG 57.013 34.615 0.00 0.00 0.00 2.27
118 119 9.447279 TCTTTATATTCTTCCTCTCCCATACAA 57.553 33.333 0.00 0.00 0.00 2.41
119 120 9.447279 TTCTTTATATTCTTCCTCTCCCATACA 57.553 33.333 0.00 0.00 0.00 2.29
122 123 7.887495 GCATTCTTTATATTCTTCCTCTCCCAT 59.113 37.037 0.00 0.00 0.00 4.00
123 124 7.147320 TGCATTCTTTATATTCTTCCTCTCCCA 60.147 37.037 0.00 0.00 0.00 4.37
124 125 7.227156 TGCATTCTTTATATTCTTCCTCTCCC 58.773 38.462 0.00 0.00 0.00 4.30
125 126 8.728833 CATGCATTCTTTATATTCTTCCTCTCC 58.271 37.037 0.00 0.00 0.00 3.71
126 127 8.235905 GCATGCATTCTTTATATTCTTCCTCTC 58.764 37.037 14.21 0.00 0.00 3.20
127 128 7.722728 TGCATGCATTCTTTATATTCTTCCTCT 59.277 33.333 18.46 0.00 0.00 3.69
128 129 7.806960 GTGCATGCATTCTTTATATTCTTCCTC 59.193 37.037 25.64 0.00 0.00 3.71
129 130 7.504911 AGTGCATGCATTCTTTATATTCTTCCT 59.495 33.333 25.64 6.67 0.00 3.36
130 131 7.594015 CAGTGCATGCATTCTTTATATTCTTCC 59.406 37.037 25.64 4.19 0.00 3.46
131 132 8.133627 ACAGTGCATGCATTCTTTATATTCTTC 58.866 33.333 25.64 4.61 0.00 2.87
132 133 8.004087 ACAGTGCATGCATTCTTTATATTCTT 57.996 30.769 25.64 0.36 0.00 2.52
133 134 7.255381 GGACAGTGCATGCATTCTTTATATTCT 60.255 37.037 25.64 8.47 0.00 2.40
134 135 6.860023 GGACAGTGCATGCATTCTTTATATTC 59.140 38.462 25.64 6.01 0.00 1.75
135 136 6.548622 AGGACAGTGCATGCATTCTTTATATT 59.451 34.615 25.64 0.32 0.00 1.28
136 137 6.066690 AGGACAGTGCATGCATTCTTTATAT 58.933 36.000 25.64 2.06 0.00 0.86
137 138 5.439721 AGGACAGTGCATGCATTCTTTATA 58.560 37.500 25.64 0.00 0.00 0.98
138 139 4.275810 AGGACAGTGCATGCATTCTTTAT 58.724 39.130 25.64 5.46 0.00 1.40
139 140 3.689347 AGGACAGTGCATGCATTCTTTA 58.311 40.909 25.64 0.00 0.00 1.85
140 141 2.522185 AGGACAGTGCATGCATTCTTT 58.478 42.857 25.64 10.29 0.00 2.52
141 142 2.211250 AGGACAGTGCATGCATTCTT 57.789 45.000 25.64 14.00 0.00 2.52
142 143 2.089980 GAAGGACAGTGCATGCATTCT 58.910 47.619 25.64 14.64 0.00 2.40
143 144 2.089980 AGAAGGACAGTGCATGCATTC 58.910 47.619 25.64 20.88 0.00 2.67
144 145 1.816835 CAGAAGGACAGTGCATGCATT 59.183 47.619 25.64 18.02 0.00 3.56
145 146 1.271762 ACAGAAGGACAGTGCATGCAT 60.272 47.619 25.64 8.04 0.00 3.96
146 147 0.109153 ACAGAAGGACAGTGCATGCA 59.891 50.000 18.46 18.46 0.00 3.96
147 148 0.520404 CACAGAAGGACAGTGCATGC 59.480 55.000 11.82 11.82 0.00 4.06
152 153 1.069823 AGAGTGCACAGAAGGACAGTG 59.930 52.381 21.04 0.00 38.70 3.66
153 154 1.342819 GAGAGTGCACAGAAGGACAGT 59.657 52.381 21.04 0.00 31.60 3.55
154 155 1.617850 AGAGAGTGCACAGAAGGACAG 59.382 52.381 21.04 0.00 31.60 3.51
155 156 1.615883 GAGAGAGTGCACAGAAGGACA 59.384 52.381 21.04 0.00 31.60 4.02
156 157 1.892474 AGAGAGAGTGCACAGAAGGAC 59.108 52.381 21.04 4.12 0.00 3.85
157 158 2.166829 GAGAGAGAGTGCACAGAAGGA 58.833 52.381 21.04 0.00 0.00 3.36
158 159 1.204467 GGAGAGAGAGTGCACAGAAGG 59.796 57.143 21.04 0.00 0.00 3.46
159 160 1.204467 GGGAGAGAGAGTGCACAGAAG 59.796 57.143 21.04 0.00 0.00 2.85
160 161 1.203112 AGGGAGAGAGAGTGCACAGAA 60.203 52.381 21.04 0.00 0.00 3.02
161 162 0.407528 AGGGAGAGAGAGTGCACAGA 59.592 55.000 21.04 0.00 0.00 3.41
162 163 0.817013 GAGGGAGAGAGAGTGCACAG 59.183 60.000 21.04 0.00 0.00 3.66
163 164 0.407528 AGAGGGAGAGAGAGTGCACA 59.592 55.000 21.04 0.00 0.00 4.57
164 165 1.555967 AAGAGGGAGAGAGAGTGCAC 58.444 55.000 9.40 9.40 0.00 4.57
165 166 2.175202 GAAAGAGGGAGAGAGAGTGCA 58.825 52.381 0.00 0.00 0.00 4.57
166 167 1.480545 GGAAAGAGGGAGAGAGAGTGC 59.519 57.143 0.00 0.00 0.00 4.40
167 168 2.760092 CAGGAAAGAGGGAGAGAGAGTG 59.240 54.545 0.00 0.00 0.00 3.51
168 169 2.652348 TCAGGAAAGAGGGAGAGAGAGT 59.348 50.000 0.00 0.00 0.00 3.24
169 170 3.023832 GTCAGGAAAGAGGGAGAGAGAG 58.976 54.545 0.00 0.00 0.00 3.20
170 171 2.380249 TGTCAGGAAAGAGGGAGAGAGA 59.620 50.000 0.00 0.00 0.00 3.10
171 172 2.813907 TGTCAGGAAAGAGGGAGAGAG 58.186 52.381 0.00 0.00 0.00 3.20
172 173 3.260269 TTGTCAGGAAAGAGGGAGAGA 57.740 47.619 0.00 0.00 0.00 3.10
173 174 4.357918 TTTTGTCAGGAAAGAGGGAGAG 57.642 45.455 0.00 0.00 0.00 3.20
174 175 4.166144 AGTTTTTGTCAGGAAAGAGGGAGA 59.834 41.667 0.00 0.00 0.00 3.71
175 176 4.276926 CAGTTTTTGTCAGGAAAGAGGGAG 59.723 45.833 0.00 0.00 0.00 4.30
176 177 4.080015 TCAGTTTTTGTCAGGAAAGAGGGA 60.080 41.667 0.00 0.00 0.00 4.20
177 178 4.036852 GTCAGTTTTTGTCAGGAAAGAGGG 59.963 45.833 0.00 0.00 0.00 4.30
178 179 4.640201 TGTCAGTTTTTGTCAGGAAAGAGG 59.360 41.667 0.00 0.00 0.00 3.69
179 180 5.818136 TGTCAGTTTTTGTCAGGAAAGAG 57.182 39.130 0.00 0.00 0.00 2.85
180 181 5.450412 GCATGTCAGTTTTTGTCAGGAAAGA 60.450 40.000 0.00 0.00 29.97 2.52
181 182 4.741676 GCATGTCAGTTTTTGTCAGGAAAG 59.258 41.667 0.00 0.00 29.97 2.62
182 183 4.159321 TGCATGTCAGTTTTTGTCAGGAAA 59.841 37.500 0.00 0.00 29.97 3.13
183 184 3.698539 TGCATGTCAGTTTTTGTCAGGAA 59.301 39.130 0.00 0.00 29.97 3.36
184 185 3.066621 GTGCATGTCAGTTTTTGTCAGGA 59.933 43.478 0.00 0.00 29.97 3.86
185 186 3.374745 GTGCATGTCAGTTTTTGTCAGG 58.625 45.455 0.00 0.00 31.34 3.86
186 187 3.181488 TGGTGCATGTCAGTTTTTGTCAG 60.181 43.478 0.00 0.00 0.00 3.51
187 188 2.757314 TGGTGCATGTCAGTTTTTGTCA 59.243 40.909 0.00 0.00 0.00 3.58
188 189 3.374745 CTGGTGCATGTCAGTTTTTGTC 58.625 45.455 0.00 0.00 0.00 3.18
189 190 2.101249 CCTGGTGCATGTCAGTTTTTGT 59.899 45.455 11.78 0.00 0.00 2.83
190 191 2.746269 CCTGGTGCATGTCAGTTTTTG 58.254 47.619 11.78 0.00 0.00 2.44
191 192 1.069049 GCCTGGTGCATGTCAGTTTTT 59.931 47.619 11.78 0.00 40.77 1.94
192 193 0.675633 GCCTGGTGCATGTCAGTTTT 59.324 50.000 11.78 0.00 40.77 2.43
193 194 1.518056 CGCCTGGTGCATGTCAGTTT 61.518 55.000 11.78 0.00 41.33 2.66
194 195 1.968017 CGCCTGGTGCATGTCAGTT 60.968 57.895 11.78 0.00 41.33 3.16
195 196 1.826340 TACGCCTGGTGCATGTCAGT 61.826 55.000 7.27 2.56 41.33 3.41
196 197 0.462581 ATACGCCTGGTGCATGTCAG 60.463 55.000 7.27 0.00 41.33 3.51
197 198 0.035534 AATACGCCTGGTGCATGTCA 60.036 50.000 7.27 0.00 41.33 3.58
198 199 0.657840 GAATACGCCTGGTGCATGTC 59.342 55.000 7.27 0.00 41.33 3.06
199 200 0.253044 AGAATACGCCTGGTGCATGT 59.747 50.000 7.27 0.00 41.33 3.21
200 201 1.382522 AAGAATACGCCTGGTGCATG 58.617 50.000 7.27 0.00 41.33 4.06
201 202 2.128771 AAAGAATACGCCTGGTGCAT 57.871 45.000 7.27 0.00 41.33 3.96
202 203 1.539388 CAAAAGAATACGCCTGGTGCA 59.461 47.619 7.27 0.00 41.33 4.57
203 204 1.539827 ACAAAAGAATACGCCTGGTGC 59.460 47.619 7.27 0.00 0.00 5.01
204 205 5.123186 TCAATACAAAAGAATACGCCTGGTG 59.877 40.000 5.54 5.54 0.00 4.17
205 206 5.250200 TCAATACAAAAGAATACGCCTGGT 58.750 37.500 0.00 0.00 0.00 4.00
206 207 5.811399 TCAATACAAAAGAATACGCCTGG 57.189 39.130 0.00 0.00 0.00 4.45
207 208 6.912591 GGAATCAATACAAAAGAATACGCCTG 59.087 38.462 0.00 0.00 0.00 4.85
208 209 6.828785 AGGAATCAATACAAAAGAATACGCCT 59.171 34.615 0.00 0.00 0.00 5.52
209 210 7.027778 AGGAATCAATACAAAAGAATACGCC 57.972 36.000 0.00 0.00 0.00 5.68
210 211 8.911247 AAAGGAATCAATACAAAAGAATACGC 57.089 30.769 0.00 0.00 0.00 4.42
245 246 9.733219 GCGTATAAGTGAGTTATAAAGAGAGTT 57.267 33.333 1.52 0.00 35.71 3.01
246 247 8.900781 TGCGTATAAGTGAGTTATAAAGAGAGT 58.099 33.333 1.52 0.00 35.71 3.24
247 248 9.388346 CTGCGTATAAGTGAGTTATAAAGAGAG 57.612 37.037 1.52 0.00 35.71 3.20
248 249 9.117183 TCTGCGTATAAGTGAGTTATAAAGAGA 57.883 33.333 1.52 1.68 35.71 3.10
249 250 9.731819 TTCTGCGTATAAGTGAGTTATAAAGAG 57.268 33.333 1.52 0.00 35.71 2.85
253 254 9.512435 GTCTTTCTGCGTATAAGTGAGTTATAA 57.488 33.333 1.52 0.00 35.71 0.98
254 255 8.680001 TGTCTTTCTGCGTATAAGTGAGTTATA 58.320 33.333 0.00 0.00 33.16 0.98
255 256 7.544622 TGTCTTTCTGCGTATAAGTGAGTTAT 58.455 34.615 0.00 0.00 35.40 1.89
256 257 6.916440 TGTCTTTCTGCGTATAAGTGAGTTA 58.084 36.000 0.00 0.00 0.00 2.24
257 258 5.779922 TGTCTTTCTGCGTATAAGTGAGTT 58.220 37.500 0.00 0.00 0.00 3.01
258 259 5.386958 TGTCTTTCTGCGTATAAGTGAGT 57.613 39.130 0.00 0.00 0.00 3.41
259 260 4.266502 GCTGTCTTTCTGCGTATAAGTGAG 59.733 45.833 0.00 0.00 0.00 3.51
260 261 4.174009 GCTGTCTTTCTGCGTATAAGTGA 58.826 43.478 0.00 0.00 0.00 3.41
261 262 3.926527 TGCTGTCTTTCTGCGTATAAGTG 59.073 43.478 0.00 0.00 42.62 3.16
262 263 3.927142 GTGCTGTCTTTCTGCGTATAAGT 59.073 43.478 0.00 0.00 42.62 2.24
263 264 3.000674 CGTGCTGTCTTTCTGCGTATAAG 60.001 47.826 0.00 0.00 42.62 1.73
264 265 2.921121 CGTGCTGTCTTTCTGCGTATAA 59.079 45.455 0.00 0.00 42.62 0.98
265 266 2.526077 CGTGCTGTCTTTCTGCGTATA 58.474 47.619 0.00 0.00 42.62 1.47
266 267 1.350193 CGTGCTGTCTTTCTGCGTAT 58.650 50.000 0.00 0.00 42.62 3.06
267 268 1.282248 GCGTGCTGTCTTTCTGCGTA 61.282 55.000 0.00 0.00 42.62 4.42
268 269 2.598632 GCGTGCTGTCTTTCTGCGT 61.599 57.895 0.00 0.00 42.62 5.24
269 270 1.904852 ATGCGTGCTGTCTTTCTGCG 61.905 55.000 0.00 0.00 42.62 5.18
270 271 0.179205 GATGCGTGCTGTCTTTCTGC 60.179 55.000 0.00 0.00 40.62 4.26
271 272 1.436600 AGATGCGTGCTGTCTTTCTG 58.563 50.000 0.00 0.00 0.00 3.02
272 273 1.802960 CAAGATGCGTGCTGTCTTTCT 59.197 47.619 9.34 0.00 30.19 2.52
273 274 1.800586 TCAAGATGCGTGCTGTCTTTC 59.199 47.619 9.34 0.00 30.19 2.62
274 275 1.802960 CTCAAGATGCGTGCTGTCTTT 59.197 47.619 9.34 0.00 30.19 2.52
275 276 1.436600 CTCAAGATGCGTGCTGTCTT 58.563 50.000 7.08 7.08 32.70 3.01
276 277 1.018226 GCTCAAGATGCGTGCTGTCT 61.018 55.000 0.00 0.00 0.00 3.41
277 278 1.293963 TGCTCAAGATGCGTGCTGTC 61.294 55.000 0.00 0.00 0.00 3.51
278 279 0.886043 TTGCTCAAGATGCGTGCTGT 60.886 50.000 0.00 0.00 0.00 4.40
279 280 0.239082 TTTGCTCAAGATGCGTGCTG 59.761 50.000 0.00 0.00 0.00 4.41
280 281 1.171308 ATTTGCTCAAGATGCGTGCT 58.829 45.000 0.00 0.00 0.00 4.40
281 282 1.652124 CAATTTGCTCAAGATGCGTGC 59.348 47.619 0.00 0.00 0.00 5.34
282 283 1.652124 GCAATTTGCTCAAGATGCGTG 59.348 47.619 14.11 0.00 40.96 5.34
283 284 1.730121 CGCAATTTGCTCAAGATGCGT 60.730 47.619 23.50 0.00 44.53 5.24
284 285 0.911856 CGCAATTTGCTCAAGATGCG 59.088 50.000 18.57 20.82 44.36 4.73
285 286 1.135315 TCCGCAATTTGCTCAAGATGC 60.135 47.619 18.57 9.98 42.25 3.91
286 287 2.925578 TCCGCAATTTGCTCAAGATG 57.074 45.000 18.57 1.96 42.25 2.90
287 288 2.100252 CCATCCGCAATTTGCTCAAGAT 59.900 45.455 18.57 11.99 42.25 2.40
288 289 1.473677 CCATCCGCAATTTGCTCAAGA 59.526 47.619 18.57 10.40 42.25 3.02
289 290 1.203052 ACCATCCGCAATTTGCTCAAG 59.797 47.619 18.57 3.68 42.25 3.02
290 291 1.067706 CACCATCCGCAATTTGCTCAA 60.068 47.619 18.57 4.96 42.25 3.02
291 292 0.527113 CACCATCCGCAATTTGCTCA 59.473 50.000 18.57 5.78 42.25 4.26
292 293 0.179129 CCACCATCCGCAATTTGCTC 60.179 55.000 18.57 0.00 42.25 4.26
293 294 0.611618 TCCACCATCCGCAATTTGCT 60.612 50.000 18.57 0.00 42.25 3.91
294 295 0.461135 ATCCACCATCCGCAATTTGC 59.539 50.000 11.42 11.42 40.69 3.68
295 296 1.067516 GGATCCACCATCCGCAATTTG 59.932 52.381 6.95 0.00 42.14 2.32
296 297 1.402787 GGATCCACCATCCGCAATTT 58.597 50.000 6.95 0.00 42.14 1.82
297 298 3.116091 GGATCCACCATCCGCAATT 57.884 52.632 6.95 0.00 42.14 2.32
298 299 4.907457 GGATCCACCATCCGCAAT 57.093 55.556 6.95 0.00 42.14 3.56
304 305 1.489230 ACCGGTAAAGGATCCACCATC 59.511 52.381 15.82 0.00 42.04 3.51
305 306 1.591768 ACCGGTAAAGGATCCACCAT 58.408 50.000 15.82 1.16 42.04 3.55
306 307 1.832998 GTACCGGTAAAGGATCCACCA 59.167 52.381 17.78 0.00 42.04 4.17
307 308 1.832998 TGTACCGGTAAAGGATCCACC 59.167 52.381 17.78 12.11 39.35 4.61
308 309 3.493873 GGATGTACCGGTAAAGGATCCAC 60.494 52.174 24.88 12.70 34.24 4.02
309 310 2.701951 GGATGTACCGGTAAAGGATCCA 59.298 50.000 24.88 15.91 34.24 3.41
310 311 2.038164 GGGATGTACCGGTAAAGGATCC 59.962 54.545 17.78 21.43 40.11 3.36
311 312 3.397849 GGGATGTACCGGTAAAGGATC 57.602 52.381 17.78 14.41 40.11 3.36
322 323 4.910585 CCGGCAGCGGGATGTACC 62.911 72.222 13.88 0.00 38.08 3.34
323 324 2.300850 TTACCGGCAGCGGGATGTAC 62.301 60.000 25.16 0.00 0.00 2.90
324 325 1.615165 TTTACCGGCAGCGGGATGTA 61.615 55.000 25.16 4.92 0.00 2.29
325 326 2.472414 TTTTACCGGCAGCGGGATGT 62.472 55.000 25.16 5.94 0.00 3.06
326 327 1.309499 TTTTTACCGGCAGCGGGATG 61.309 55.000 25.16 0.00 0.00 3.51
327 328 1.001887 TTTTTACCGGCAGCGGGAT 60.002 52.632 25.16 11.81 0.00 3.85
328 329 2.430805 TTTTTACCGGCAGCGGGA 59.569 55.556 25.16 4.98 0.00 5.14
342 343 2.095059 AGAGCTCGCGAATTGCATTTTT 60.095 40.909 19.29 0.00 46.97 1.94
343 344 1.470098 AGAGCTCGCGAATTGCATTTT 59.530 42.857 19.29 0.22 46.97 1.82
344 345 1.063174 GAGAGCTCGCGAATTGCATTT 59.937 47.619 19.29 5.70 46.97 2.32
345 346 0.654683 GAGAGCTCGCGAATTGCATT 59.345 50.000 19.29 7.96 46.97 3.56
346 347 1.156645 GGAGAGCTCGCGAATTGCAT 61.157 55.000 19.29 8.60 46.97 3.96
347 348 1.811266 GGAGAGCTCGCGAATTGCA 60.811 57.895 19.29 0.00 46.97 4.08
348 349 2.864931 CGGAGAGCTCGCGAATTGC 61.865 63.158 11.33 10.88 41.47 3.56
349 350 2.864931 GCGGAGAGCTCGCGAATTG 61.865 63.158 11.33 0.00 43.71 2.32
350 351 2.583593 GCGGAGAGCTCGCGAATT 60.584 61.111 11.33 0.00 43.71 2.17
360 361 2.219325 GACCAGTGGACAGCGGAGAG 62.219 65.000 18.40 0.00 0.00 3.20
361 362 2.203640 ACCAGTGGACAGCGGAGA 60.204 61.111 18.40 0.00 0.00 3.71
362 363 2.262915 GACCAGTGGACAGCGGAG 59.737 66.667 18.40 0.00 0.00 4.63
363 364 3.680786 CGACCAGTGGACAGCGGA 61.681 66.667 18.40 0.00 0.00 5.54
364 365 2.989055 AAACGACCAGTGGACAGCGG 62.989 60.000 18.40 0.00 0.00 5.52
365 366 1.557443 GAAACGACCAGTGGACAGCG 61.557 60.000 18.40 15.46 0.00 5.18
366 367 1.228657 GGAAACGACCAGTGGACAGC 61.229 60.000 18.40 1.01 0.00 4.40
367 368 2.914379 GGAAACGACCAGTGGACAG 58.086 57.895 18.40 8.92 0.00 3.51
388 389 0.874607 GTTGACGACGAACAGGCACT 60.875 55.000 0.00 0.00 43.88 4.40
389 390 0.874607 AGTTGACGACGAACAGGCAC 60.875 55.000 0.00 0.00 0.00 5.01
394 395 0.593008 CGACCAGTTGACGACGAACA 60.593 55.000 0.00 0.00 0.00 3.18
399 400 0.857287 GGAAACGACCAGTTGACGAC 59.143 55.000 0.00 0.00 43.37 4.34
456 457 1.303074 CACCAGCATCAGCACCTGT 60.303 57.895 0.00 0.00 45.49 4.00
502 507 2.557924 CAGGACTGGCTGTGCATAAAAA 59.442 45.455 17.53 0.00 39.64 1.94
503 508 2.161855 CAGGACTGGCTGTGCATAAAA 58.838 47.619 17.53 0.00 39.64 1.52
504 509 1.825090 CAGGACTGGCTGTGCATAAA 58.175 50.000 17.53 0.00 39.64 1.40
505 510 0.677731 GCAGGACTGGCTGTGCATAA 60.678 55.000 17.53 0.00 39.64 1.90
506 511 1.078214 GCAGGACTGGCTGTGCATA 60.078 57.895 17.53 0.00 39.64 3.14
507 512 2.360852 GCAGGACTGGCTGTGCAT 60.361 61.111 17.53 1.15 39.64 3.96
508 513 3.541950 GAGCAGGACTGGCTGTGCA 62.542 63.158 17.53 0.00 42.78 4.57
509 514 2.745492 GAGCAGGACTGGCTGTGC 60.745 66.667 7.95 7.95 42.78 4.57
511 516 1.072159 GTTGAGCAGGACTGGCTGT 59.928 57.895 0.00 0.00 42.78 4.40
523 528 2.396590 TACAATTCCCCGAGTTGAGC 57.603 50.000 4.17 0.00 33.83 4.26
524 529 5.648092 AGAAAATACAATTCCCCGAGTTGAG 59.352 40.000 4.17 0.00 33.83 3.02
536 541 9.068008 CACCGCGTTATTTTAGAAAATACAATT 57.932 29.630 4.92 0.00 39.75 2.32
538 543 7.583230 ACACCGCGTTATTTTAGAAAATACAA 58.417 30.769 4.92 0.00 39.75 2.41
540 545 7.458677 AGACACCGCGTTATTTTAGAAAATAC 58.541 34.615 4.92 3.38 39.75 1.89
551 562 8.120465 CAGATTAATAAAAGACACCGCGTTATT 58.880 33.333 4.92 9.37 0.00 1.40
552 563 7.279313 ACAGATTAATAAAAGACACCGCGTTAT 59.721 33.333 4.92 0.00 0.00 1.89
553 564 6.591062 ACAGATTAATAAAAGACACCGCGTTA 59.409 34.615 4.92 0.00 0.00 3.18
555 566 4.933400 ACAGATTAATAAAAGACACCGCGT 59.067 37.500 4.92 0.00 0.00 6.01
556 567 5.255596 CACAGATTAATAAAAGACACCGCG 58.744 41.667 0.00 0.00 0.00 6.46
557 568 5.028375 GCACAGATTAATAAAAGACACCGC 58.972 41.667 0.00 0.00 0.00 5.68
558 569 5.123186 TGGCACAGATTAATAAAAGACACCG 59.877 40.000 0.00 0.00 0.00 4.94
569 581 3.009723 CGAGTGGTTGGCACAGATTAAT 58.990 45.455 0.00 0.00 42.39 1.40
590 602 6.015688 TCCTATGGATAAACACAGATCGGTAC 60.016 42.308 0.00 0.00 0.00 3.34
594 606 7.602753 TGTATCCTATGGATAAACACAGATCG 58.397 38.462 7.77 0.00 44.98 3.69
603 615 9.758021 AAATGCATCATGTATCCTATGGATAAA 57.242 29.630 0.00 3.68 44.98 1.40
614 626 7.830940 TTTTTGGACAAATGCATCATGTATC 57.169 32.000 15.69 12.17 0.00 2.24
678 704 1.298157 CGGCTCGCTGAATTGGTTGA 61.298 55.000 0.00 0.00 0.00 3.18
718 744 3.244249 GGGTCTTGGGTGCTGAGATATAC 60.244 52.174 0.00 0.00 0.00 1.47
728 754 2.210144 TATGCCTGGGTCTTGGGTGC 62.210 60.000 0.00 0.00 0.00 5.01
823 860 3.645687 TGGTGTGGATATGTGCAGCTATA 59.354 43.478 0.00 0.00 0.00 1.31
824 861 2.439135 TGGTGTGGATATGTGCAGCTAT 59.561 45.455 0.00 0.00 0.00 2.97
847 903 0.891373 TTCTCTGCCTTCAGACGGAG 59.109 55.000 0.00 0.00 43.95 4.63
850 906 2.693069 ACATTTCTCTGCCTTCAGACG 58.307 47.619 0.00 0.00 43.95 4.18
937 1047 5.179045 TCGTCCGGAGAAGATTTATGTAC 57.821 43.478 3.06 0.00 0.00 2.90
957 1067 1.545759 TAGCTGATTCGTTCGCTTCG 58.454 50.000 0.00 0.00 36.25 3.79
959 1069 1.594862 GCATAGCTGATTCGTTCGCTT 59.405 47.619 0.00 1.72 36.25 4.68
961 1072 0.930310 TGCATAGCTGATTCGTTCGC 59.070 50.000 0.00 0.00 0.00 4.70
1299 1511 2.301870 CAGGAGTAGTAACCAACCTGCA 59.698 50.000 0.00 0.00 36.16 4.41
1311 1523 6.828785 AGATTTCACAAACAAACAGGAGTAGT 59.171 34.615 0.00 0.00 0.00 2.73
1344 1830 2.224257 ACAAAATGCAGCACCGGAAAAT 60.224 40.909 9.46 0.00 0.00 1.82
1429 1944 6.747280 CCACTCAACGCATTAATAAGGAAAAG 59.253 38.462 0.00 0.00 0.00 2.27
1437 2229 7.040755 CCCAAATATCCACTCAACGCATTAATA 60.041 37.037 0.00 0.00 0.00 0.98
1469 2273 0.609131 ATTGTTCCACCAAGAGGGCG 60.609 55.000 0.00 0.00 42.05 6.13
1509 2318 5.330295 CTGAATTCAGTTATGCTTCAGCAC 58.670 41.667 24.65 0.00 45.31 4.40
1552 2386 2.975489 ACCACATCAAGTTCTGGTCTCT 59.025 45.455 0.00 0.00 30.85 3.10
1553 2387 3.409026 ACCACATCAAGTTCTGGTCTC 57.591 47.619 0.00 0.00 30.85 3.36
1605 2450 9.249457 GCTGTCAAAATTAGCCTAAATATTTCC 57.751 33.333 3.39 0.00 0.00 3.13
1610 2455 9.899661 TTCTAGCTGTCAAAATTAGCCTAAATA 57.100 29.630 0.00 0.00 38.18 1.40
1611 2456 8.807948 TTCTAGCTGTCAAAATTAGCCTAAAT 57.192 30.769 0.00 0.00 38.18 1.40
1612 2457 8.807948 ATTCTAGCTGTCAAAATTAGCCTAAA 57.192 30.769 0.00 0.00 38.18 1.85
1613 2458 8.807948 AATTCTAGCTGTCAAAATTAGCCTAA 57.192 30.769 0.00 0.00 38.18 2.69
1614 2459 8.807948 AAATTCTAGCTGTCAAAATTAGCCTA 57.192 30.769 0.00 0.00 38.18 3.93
1615 2460 7.709149 AAATTCTAGCTGTCAAAATTAGCCT 57.291 32.000 0.00 0.00 38.18 4.58
1616 2461 8.763049 AAAAATTCTAGCTGTCAAAATTAGCC 57.237 30.769 0.00 0.00 38.18 3.93
1873 2836 7.307131 TGCTCTGATGAAGGTCATGATAATA 57.693 36.000 0.00 0.00 37.20 0.98
1922 2890 9.669353 CCGAAATTTCCAGAAACAATGATATAG 57.331 33.333 12.54 0.00 32.51 1.31
1926 2894 5.245977 ACCCGAAATTTCCAGAAACAATGAT 59.754 36.000 12.54 0.00 32.51 2.45
2068 3056 4.685169 ATCTAACAACCGATTGCAGTTG 57.315 40.909 13.34 13.34 46.95 3.16
2096 3085 9.993454 TCTTGAGAAGGAACATGATTATATGAG 57.007 33.333 0.00 0.00 0.00 2.90
2183 3223 2.808543 GGAGTGTGATGTGGACTTGAAC 59.191 50.000 0.00 0.00 0.00 3.18
2388 3527 2.975410 CTGTGAAATCTTCGCTGCAA 57.025 45.000 0.00 0.00 40.72 4.08
2439 3578 2.419990 CGTCCAAGATGCAACCCTATCA 60.420 50.000 0.00 0.00 0.00 2.15
2618 3757 5.378292 TCTGTACAGACTGACAACTGATC 57.622 43.478 21.74 0.00 37.54 2.92
3033 5246 5.511386 AAGAACCCTTGATGAGTTCAGAT 57.489 39.130 5.07 0.00 41.86 2.90
3042 5255 9.807649 CCAATAAAATCTAAAGAACCCTTGATG 57.192 33.333 0.00 0.00 31.91 3.07
3108 5321 2.054799 TCTCAAACCCCTGTTGCTAGT 58.945 47.619 0.00 0.00 34.13 2.57
3120 5333 1.071605 CTGCGCTGTAGTCTCAAACC 58.928 55.000 9.73 0.00 0.00 3.27
3124 5337 1.177401 ATGTCTGCGCTGTAGTCTCA 58.823 50.000 9.73 3.63 0.00 3.27
3208 9356 5.807520 CACATCCACACAGTACATAACTCTC 59.192 44.000 0.00 0.00 35.76 3.20
3274 10691 7.227910 GCTTAATTAACCGTTGGATGGAGAATA 59.772 37.037 0.00 0.00 0.00 1.75
3285 10702 4.381566 GTGCAACTGCTTAATTAACCGTTG 59.618 41.667 19.00 19.00 42.66 4.10
3371 10795 3.923648 TCAGGATTCGGGAATCTCCTTA 58.076 45.455 18.05 2.10 44.90 2.69
3409 13003 1.818785 CAGCAGCTTGGCTAGGCTC 60.819 63.158 18.18 6.75 43.68 4.70
3412 13007 0.321919 TTCACAGCAGCTTGGCTAGG 60.322 55.000 0.00 0.00 43.68 3.02
3457 13251 4.393693 GCTTGCCAGCTTGTCTCT 57.606 55.556 1.78 0.00 43.51 3.10
3497 13292 2.017049 AGAGACATGCCCAATTTACGC 58.983 47.619 0.00 0.00 0.00 4.42
3734 13716 8.168626 GCCAAAATAACTGCATTTTTAGCTAAC 58.831 33.333 5.45 0.00 36.26 2.34
3804 13810 8.821894 CGTATTTCTTTTCTAATCTCCTGAAGG 58.178 37.037 0.00 0.00 0.00 3.46
3810 13816 6.238402 GGGCACGTATTTCTTTTCTAATCTCC 60.238 42.308 0.00 0.00 0.00 3.71
3831 13838 2.683867 CGGTATCGGTTTTTAATGGGCA 59.316 45.455 0.00 0.00 0.00 5.36
3832 13839 2.944349 TCGGTATCGGTTTTTAATGGGC 59.056 45.455 0.00 0.00 36.95 5.36
3834 13841 5.032220 GCTTTCGGTATCGGTTTTTAATGG 58.968 41.667 0.00 0.00 36.95 3.16
3865 13876 7.337689 TCCAATAAGGATCATCTTTGACAGTTG 59.662 37.037 0.00 0.00 43.07 3.16
4030 14047 5.474876 ACCTTAATTTGTTCTTCAGCAGAGG 59.525 40.000 0.00 0.00 31.12 3.69
4032 14049 5.278463 GCACCTTAATTTGTTCTTCAGCAGA 60.278 40.000 0.00 0.00 0.00 4.26
4033 14050 4.919754 GCACCTTAATTTGTTCTTCAGCAG 59.080 41.667 0.00 0.00 0.00 4.24
4034 14051 4.340666 TGCACCTTAATTTGTTCTTCAGCA 59.659 37.500 0.00 0.00 0.00 4.41
4035 14052 4.870363 TGCACCTTAATTTGTTCTTCAGC 58.130 39.130 0.00 0.00 0.00 4.26
4037 14054 6.815089 ACAATGCACCTTAATTTGTTCTTCA 58.185 32.000 0.00 0.00 0.00 3.02
4040 14057 7.951591 AGTAACAATGCACCTTAATTTGTTCT 58.048 30.769 13.88 9.47 40.11 3.01
4041 14058 7.865385 TGAGTAACAATGCACCTTAATTTGTTC 59.135 33.333 13.88 7.84 40.11 3.18
4048 14070 6.264292 ACAACATGAGTAACAATGCACCTTAA 59.736 34.615 0.00 0.00 0.00 1.85
4049 14076 5.767665 ACAACATGAGTAACAATGCACCTTA 59.232 36.000 0.00 0.00 0.00 2.69
4083 14117 1.396653 CAGATCCCATGCCTGAAACC 58.603 55.000 0.00 0.00 0.00 3.27
4153 14448 1.659211 CGCGTTAAGTGTGCTTTCCAC 60.659 52.381 0.00 0.00 44.90 4.02
4217 15015 5.938322 TCACGATACAAGCAATTTTCCTTC 58.062 37.500 0.00 0.00 0.00 3.46
4232 15030 4.928661 AACAAACAGAGCATCACGATAC 57.071 40.909 0.00 0.00 37.82 2.24
4234 15032 3.565482 ACAAACAAACAGAGCATCACGAT 59.435 39.130 0.00 0.00 37.82 3.73
4248 15062 3.995199 TCCTGCACAACAAACAAACAAA 58.005 36.364 0.00 0.00 0.00 2.83
4271 16801 3.827898 CCTCTCACGTCGGCTCCC 61.828 72.222 0.00 0.00 0.00 4.30
4308 16838 4.580835 GAGCTCGAACAGGTCCAC 57.419 61.111 0.00 0.00 42.98 4.02
4488 17021 3.978723 CTCAGGACACGGCGCTCAG 62.979 68.421 6.90 1.39 0.00 3.35
4489 17022 4.056125 CTCAGGACACGGCGCTCA 62.056 66.667 6.90 0.00 0.00 4.26
4490 17023 3.575351 AACTCAGGACACGGCGCTC 62.575 63.158 6.90 0.85 0.00 5.03
4491 17024 3.616721 AACTCAGGACACGGCGCT 61.617 61.111 6.90 0.00 0.00 5.92
4492 17025 3.414700 CAACTCAGGACACGGCGC 61.415 66.667 6.90 0.00 0.00 6.53
4493 17026 2.486636 TAGCAACTCAGGACACGGCG 62.487 60.000 4.80 4.80 0.00 6.46
4506 17039 4.061596 GCTCCATAGTCCAGATTAGCAAC 58.938 47.826 0.00 0.00 0.00 4.17
4570 17126 0.037590 AAAACAGGAGCATACGGGCA 59.962 50.000 0.00 0.00 35.83 5.36
5189 18616 1.524002 GCCTATGTGCTCAGCCTCA 59.476 57.895 0.00 0.00 0.00 3.86
5289 19015 1.070786 GTTCGTGGTGAGCTTGGGA 59.929 57.895 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.