Multiple sequence alignment - TraesCS5D01G404500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G404500 chr5D 100.000 8986 0 0 1 8986 469561617 469552632 0.000000e+00 16595.0
1 TraesCS5D01G404500 chr5D 100.000 38 0 0 1564 1601 469559989 469559952 4.500000e-08 71.3
2 TraesCS5D01G404500 chr5D 100.000 38 0 0 1629 1666 469560054 469560017 4.500000e-08 71.3
3 TraesCS5D01G404500 chr5B 92.517 3381 140 42 400 3739 577309996 577306688 0.000000e+00 4737.0
4 TraesCS5D01G404500 chr5B 95.144 2574 78 18 3738 6302 577306655 577304120 0.000000e+00 4017.0
5 TraesCS5D01G404500 chr5B 93.616 1629 66 21 6844 8445 577303504 577301887 0.000000e+00 2398.0
6 TraesCS5D01G404500 chr5B 98.371 307 4 1 6376 6682 577303838 577303533 1.030000e-148 538.0
7 TraesCS5D01G404500 chr5B 88.788 330 31 3 77 402 577310421 577310094 5.050000e-107 399.0
8 TraesCS5D01G404500 chr5B 97.087 206 6 0 8477 8682 577301887 577301682 1.860000e-91 348.0
9 TraesCS5D01G404500 chr5B 90.741 54 3 2 8820 8873 119173445 119173496 4.500000e-08 71.3
10 TraesCS5D01G404500 chr5B 100.000 38 0 0 1564 1601 577308753 577308716 4.500000e-08 71.3
11 TraesCS5D01G404500 chr5B 100.000 38 0 0 1629 1666 577308817 577308780 4.500000e-08 71.3
12 TraesCS5D01G404500 chr5B 100.000 35 0 0 6729 6763 577303537 577303503 2.090000e-06 65.8
13 TraesCS5D01G404500 chr5A 93.945 2857 143 13 3840 6682 590601579 590598739 0.000000e+00 4290.0
14 TraesCS5D01G404500 chr5A 93.892 1932 66 22 6844 8737 590598710 590596793 0.000000e+00 2867.0
15 TraesCS5D01G404500 chr5A 88.567 2003 147 42 1761 3739 590603642 590601698 0.000000e+00 2355.0
16 TraesCS5D01G404500 chr5A 88.981 1207 83 26 407 1580 590605810 590604621 0.000000e+00 1447.0
17 TraesCS5D01G404500 chr5A 81.771 384 52 9 26 402 590606287 590605915 1.130000e-78 305.0
18 TraesCS5D01G404500 chr5A 96.739 92 3 0 1686 1777 590604197 590604106 4.340000e-33 154.0
19 TraesCS5D01G404500 chr5A 90.816 98 6 3 6752 6848 669627669 669627574 2.630000e-25 128.0
20 TraesCS5D01G404500 chr5A 100.000 35 0 0 6729 6763 590598743 590598709 2.090000e-06 65.8
21 TraesCS5D01G404500 chr3B 80.435 322 36 14 4408 4720 68405612 68405915 4.220000e-53 220.0
22 TraesCS5D01G404500 chrUn 80.195 308 30 17 4425 4720 463918719 463918431 1.530000e-47 202.0
23 TraesCS5D01G404500 chrUn 90.179 112 5 6 6741 6848 104668786 104668895 3.380000e-29 141.0
24 TraesCS5D01G404500 chr6D 95.876 97 2 2 6755 6849 168293847 168293751 1.210000e-33 156.0
25 TraesCS5D01G404500 chr6D 94.737 95 3 2 6754 6847 78083170 78083077 7.270000e-31 147.0
26 TraesCS5D01G404500 chr6D 84.211 57 8 1 8663 8719 79727553 79727608 5.000000e-03 54.7
27 TraesCS5D01G404500 chr7D 95.789 95 3 1 6751 6845 448336953 448337046 1.560000e-32 152.0
28 TraesCS5D01G404500 chr7D 94.737 95 3 2 6752 6845 562392794 562392887 7.270000e-31 147.0
29 TraesCS5D01G404500 chr6B 94.845 97 3 2 6751 6846 226867862 226867957 5.620000e-32 150.0
30 TraesCS5D01G404500 chr2D 91.071 112 7 3 6754 6863 15682892 15683002 2.020000e-31 148.0
31 TraesCS5D01G404500 chr1D 95.699 93 3 1 6757 6848 467810086 467810178 2.020000e-31 148.0
32 TraesCS5D01G404500 chr4D 93.878 98 3 3 6752 6848 403409522 403409617 2.610000e-30 145.0
33 TraesCS5D01G404500 chr2B 91.667 48 2 2 8672 8718 723038172 723038218 2.090000e-06 65.8
34 TraesCS5D01G404500 chr3D 85.000 60 6 3 36 93 70672377 70672319 3.500000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G404500 chr5D 469552632 469561617 8985 True 5579.200000 16595 100.000000 1 8986 3 chr5D.!!$R1 8985
1 TraesCS5D01G404500 chr5B 577301682 577310421 8739 True 1405.044444 4737 96.169222 77 8682 9 chr5B.!!$R1 8605
2 TraesCS5D01G404500 chr5A 590596793 590606287 9494 True 1640.542857 4290 91.985000 26 8737 7 chr5A.!!$R2 8711

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
172 177 0.798776 CCTCGTTTCGATGCTGCTTT 59.201 50.000 0.00 0.00 34.61 3.51 F
185 190 1.334054 CTGCTTTTTGTCATCGCAGC 58.666 50.000 0.00 0.00 41.15 5.25 F
754 865 1.404315 GCTGCAACGGAACTAGTAGCT 60.404 52.381 0.00 0.00 36.88 3.32 F
1445 1591 1.228124 ACTGGCTTAGTTTGGCGCA 60.228 52.632 10.83 0.00 35.67 6.09 F
1666 1823 1.007387 CGCCTTGTTTTCTGGTGGC 60.007 57.895 0.00 0.00 37.24 5.01 F
2928 3890 1.106944 ACGGCAAAGTGGTTGAAGGG 61.107 55.000 0.00 0.00 39.87 3.95 F
4347 5375 2.092429 TGTTCTGCTGTTCCTCCAGTTT 60.092 45.455 0.00 0.00 34.84 2.66 F
4457 5492 0.320697 ACACGGTACTTCCTGAAGCC 59.679 55.000 6.81 0.85 41.99 4.35 F
4876 5911 1.001406 ACAACAGAGAAGAAGGGCGAG 59.999 52.381 0.00 0.00 0.00 5.03 F
6498 7756 0.824109 TCAGTACCGCTGGAATGGAG 59.176 55.000 1.50 0.00 45.08 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1294 1439 1.964373 CCGAAACCGGGGAACACAG 60.964 63.158 6.32 0.0 43.22 3.66 R
1316 1462 2.435737 GCGCGCGCACAAAATCAAT 61.436 52.632 46.11 0.0 41.49 2.57 R
1666 1823 2.806945 TTCTACTCCCCAATGGCAAG 57.193 50.000 0.00 0.0 0.00 4.01 R
3078 4040 0.757561 TGGCATGATCCCCAGCATTG 60.758 55.000 0.00 0.0 0.00 2.82 R
3660 4637 2.292103 TGCACAAACACTCAAAAGGC 57.708 45.000 0.00 0.0 0.00 4.35 R
4457 5492 0.035630 CCAAGCTCCACTTCTCCAGG 60.036 60.000 0.00 0.0 36.04 4.45 R
5938 6974 2.500504 ACCCCTAGTCGGAGTCAAATTC 59.499 50.000 0.21 0.0 33.16 2.17 R
6038 7084 3.589988 ACTGTGGCTATTCAGTTTCTCG 58.410 45.455 0.00 0.0 41.33 4.04 R
6829 8087 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.0 0.00 4.37 R
8107 9408 0.743701 CTCAGCACTCAGGTCCATGC 60.744 60.000 0.00 0.0 38.39 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.099380 GGTTCAAACCGTTTCACTTTGA 57.901 40.909 0.00 0.00 39.66 2.69
57 58 4.419522 AAATGCTACTTGCTACAAACCG 57.580 40.909 0.00 0.00 43.37 4.44
66 67 3.684103 TGCTACAAACCGTTTCACTTG 57.316 42.857 0.00 0.00 0.00 3.16
68 69 2.614983 GCTACAAACCGTTTCACTTGGA 59.385 45.455 0.00 0.00 0.00 3.53
70 71 2.021457 ACAAACCGTTTCACTTGGAGG 58.979 47.619 0.00 0.00 0.00 4.30
73 74 1.971695 CCGTTTCACTTGGAGGGGC 60.972 63.158 0.00 0.00 0.00 5.80
75 76 1.228154 GTTTCACTTGGAGGGGCGT 60.228 57.895 0.00 0.00 0.00 5.68
93 94 3.254892 GCGTCTTTTCTAGTTGAGAGGG 58.745 50.000 10.99 2.29 34.93 4.30
100 101 4.974645 TTCTAGTTGAGAGGGAGCAAAA 57.025 40.909 0.00 0.00 34.93 2.44
101 102 4.543590 TCTAGTTGAGAGGGAGCAAAAG 57.456 45.455 0.00 0.00 0.00 2.27
102 103 2.575805 AGTTGAGAGGGAGCAAAAGG 57.424 50.000 0.00 0.00 0.00 3.11
138 139 4.218722 CCACCCTCGGCAATGTAC 57.781 61.111 0.00 0.00 0.00 2.90
149 154 2.092323 GGCAATGTACAAGTCCTTCCC 58.908 52.381 0.00 0.00 0.00 3.97
172 177 0.798776 CCTCGTTTCGATGCTGCTTT 59.201 50.000 0.00 0.00 34.61 3.51
185 190 1.334054 CTGCTTTTTGTCATCGCAGC 58.666 50.000 0.00 0.00 41.15 5.25
271 276 5.186021 CAGGTTTATCTCAGTGGTAGTGTCT 59.814 44.000 0.00 0.00 0.00 3.41
276 281 2.152016 CTCAGTGGTAGTGTCTCGTGA 58.848 52.381 0.00 0.00 0.00 4.35
396 401 2.479275 GTGTTCCTTTACTTCGTCTGGC 59.521 50.000 0.00 0.00 0.00 4.85
479 586 2.731691 GAAGTCCAGAGGCGGCAACA 62.732 60.000 13.08 0.00 0.00 3.33
497 604 4.748679 GCTTTGCTCACGGCGCAG 62.749 66.667 10.83 8.25 45.43 5.18
529 636 4.356405 TGCAGGAGAAAGAAGACATTCA 57.644 40.909 0.00 0.00 37.94 2.57
586 694 4.893424 TTGTAAGTGCTTTTGTGAGGAC 57.107 40.909 0.00 0.00 38.16 3.85
605 713 8.391106 GTGAGGACTTGTGCTACTTTTAATATG 58.609 37.037 0.00 0.00 0.00 1.78
627 737 2.908688 GCCTTTTGCCTTTTTCCAGA 57.091 45.000 0.00 0.00 0.00 3.86
714 825 2.033448 TTTACAGCACGGGGGCAG 59.967 61.111 0.00 0.00 35.83 4.85
750 861 2.027625 GCGCTGCAACGGAACTAGT 61.028 57.895 12.02 0.00 0.00 2.57
754 865 1.404315 GCTGCAACGGAACTAGTAGCT 60.404 52.381 0.00 0.00 36.88 3.32
760 871 1.565288 ACGGAACTAGTAGCTCTCCCT 59.435 52.381 0.00 0.00 0.00 4.20
1294 1439 1.673920 GATCCTCTGACTGACGGTCTC 59.326 57.143 15.37 0.00 44.74 3.36
1391 1537 6.251549 GTTCAGAGGAATCTTAAATTCGTGC 58.748 40.000 9.02 0.00 35.05 5.34
1445 1591 1.228124 ACTGGCTTAGTTTGGCGCA 60.228 52.632 10.83 0.00 35.67 6.09
1504 1650 5.893897 ATTCTGAGAAATTCTTCTGTGCC 57.106 39.130 0.00 0.00 42.19 5.01
1507 1653 2.816087 TGAGAAATTCTTCTGTGCCTGC 59.184 45.455 0.00 0.00 42.19 4.85
1666 1823 1.007387 CGCCTTGTTTTCTGGTGGC 60.007 57.895 0.00 0.00 37.24 5.01
1676 1833 1.186917 TTCTGGTGGCTTGCCATTGG 61.187 55.000 17.86 10.27 35.19 3.16
2110 3065 8.325477 ACTTCCTTTAGCCTTATCTCAATACT 57.675 34.615 0.00 0.00 0.00 2.12
2143 3098 8.896320 AACTGCGTTATGATGTTATATGGTTA 57.104 30.769 0.00 0.00 0.00 2.85
2238 3193 4.911514 AGCGTTAAAACAACTTGGACAT 57.088 36.364 0.00 0.00 0.00 3.06
2297 3252 8.519799 TTTTGTCAGAGATTGGTTTTTAGTCT 57.480 30.769 0.00 0.00 0.00 3.24
2525 3482 7.345914 AGAGTGCCCTGTAGTTTAGAAATCTAT 59.654 37.037 0.00 0.00 0.00 1.98
2526 3483 7.862675 AGTGCCCTGTAGTTTAGAAATCTATT 58.137 34.615 0.00 0.00 0.00 1.73
2782 3739 5.860641 TGTTTACTGTTTCGAAGTGTTGAC 58.139 37.500 0.00 0.00 0.00 3.18
2828 3789 3.057033 CCTGCATGTTAGCTTCTTTTGCT 60.057 43.478 0.00 0.00 43.79 3.91
2829 3790 3.904571 TGCATGTTAGCTTCTTTTGCTG 58.095 40.909 0.00 0.00 41.32 4.41
2910 3872 9.255304 GATGTCTCTTATCCTGTGAAATTCTAC 57.745 37.037 0.00 0.00 0.00 2.59
2928 3890 1.106944 ACGGCAAAGTGGTTGAAGGG 61.107 55.000 0.00 0.00 39.87 3.95
2967 3929 5.669447 ACACTGGATTGGAGGAGAGAATATT 59.331 40.000 0.00 0.00 0.00 1.28
3018 3980 5.046807 TCCTGGCTACAAGACTAAAACTACC 60.047 44.000 0.00 0.00 0.00 3.18
3067 4029 8.702438 CAACAGTACCATCACAAAATTTTGATC 58.298 33.333 32.20 14.51 40.55 2.92
3078 4040 6.146673 CACAAAATTTTGATCTGGGAGCTTTC 59.853 38.462 32.20 0.00 40.55 2.62
3138 4100 9.727627 CATCTAAATGCTGAAAAGGTATTCTTC 57.272 33.333 0.00 0.00 33.94 2.87
3159 4121 7.735500 TCTTCCGTCTACATTTATTTTGAACG 58.264 34.615 0.00 0.00 0.00 3.95
3203 4172 8.082242 ACAACTATTGATTCAAAGGCTAAACAC 58.918 33.333 2.68 0.00 0.00 3.32
3258 4227 3.116063 TGTCATTTTAGAATGTGCGCG 57.884 42.857 0.00 0.00 42.61 6.86
3282 4251 7.675403 GCGGTCAATCGTTTGATAACTTTGATA 60.675 37.037 11.83 0.00 43.49 2.15
3336 4305 8.831715 ATTTGGGTTTCTCATGTAAAAATGTC 57.168 30.769 0.00 0.00 0.00 3.06
3342 4311 5.856126 TCTCATGTAAAAATGTCGTCACC 57.144 39.130 0.00 0.00 0.00 4.02
3344 4313 5.760743 TCTCATGTAAAAATGTCGTCACCAA 59.239 36.000 0.00 0.00 0.00 3.67
3396 4365 9.859427 TTTTCATGTAAATAGAAAAGCTGATGG 57.141 29.630 0.00 0.00 36.61 3.51
3412 4381 2.687425 TGATGGTCAGGTGTTTTGTGTG 59.313 45.455 0.00 0.00 0.00 3.82
3450 4419 2.121291 TGAACAGAGTTTGTGCACCA 57.879 45.000 15.69 0.00 40.56 4.17
3474 4443 3.366052 ACTTCTTCACCTGGTGTTTGT 57.634 42.857 25.15 14.90 34.79 2.83
3540 4510 3.572632 AACTCAGCATATGCATCAGGT 57.427 42.857 28.62 16.45 45.16 4.00
3547 4517 6.532826 TCAGCATATGCATCAGGTTACATTA 58.467 36.000 28.62 0.00 45.16 1.90
3611 4587 3.386078 CCAGTAGTCTGTAGATGGCACAT 59.614 47.826 0.00 0.00 41.01 3.21
3612 4588 4.141846 CCAGTAGTCTGTAGATGGCACATT 60.142 45.833 0.00 0.00 41.01 2.71
3613 4589 4.807834 CAGTAGTCTGTAGATGGCACATTG 59.192 45.833 0.00 0.00 39.01 2.82
3615 4591 6.405842 CAGTAGTCTGTAGATGGCACATTGTA 60.406 42.308 0.00 0.00 39.01 2.41
3636 4612 7.873719 TGTAGAAGAACTTTTCACATGGAAA 57.126 32.000 0.00 1.40 43.59 3.13
3646 4622 5.666969 TTTCACATGGAAACGTTACTCTG 57.333 39.130 0.00 0.10 40.51 3.35
3647 4623 4.330944 TCACATGGAAACGTTACTCTGT 57.669 40.909 0.00 0.78 0.00 3.41
3648 4624 4.055360 TCACATGGAAACGTTACTCTGTG 58.945 43.478 19.66 19.66 35.30 3.66
3655 4632 6.491394 TGGAAACGTTACTCTGTGATTTTTG 58.509 36.000 0.00 0.00 0.00 2.44
3660 4637 9.445786 AAACGTTACTCTGTGATTTTTGTTATG 57.554 29.630 0.00 0.00 0.00 1.90
3728 4706 5.440610 AGTGTTCAAAAGTGGTTCTCTCAT 58.559 37.500 0.00 0.00 0.00 2.90
3792 4810 2.275318 GTACTCACATCTGAAGCTGCC 58.725 52.381 0.00 0.00 0.00 4.85
3830 4848 3.127030 GTCCGAACCATCTTTGAACATCC 59.873 47.826 0.00 0.00 0.00 3.51
3882 4910 5.425630 ACTTTTCCTCGTTTGTTCAGTAGT 58.574 37.500 0.00 0.00 0.00 2.73
3885 4913 4.778534 TCCTCGTTTGTTCAGTAGTAGG 57.221 45.455 0.00 0.00 0.00 3.18
4330 5358 3.058224 GGGTACTGCAGTTTGATGTGTTC 60.058 47.826 27.06 2.83 0.00 3.18
4347 5375 2.092429 TGTTCTGCTGTTCCTCCAGTTT 60.092 45.455 0.00 0.00 34.84 2.66
4388 5417 7.631510 TCCCTCATATGTCTTCCATTCAATA 57.368 36.000 1.90 0.00 34.86 1.90
4391 5420 9.964354 CCCTCATATGTCTTCCATTCAATAATA 57.036 33.333 1.90 0.00 34.86 0.98
4457 5492 0.320697 ACACGGTACTTCCTGAAGCC 59.679 55.000 6.81 0.85 41.99 4.35
4735 5770 2.354259 GTTGATCTTCCAGCCTCTGTG 58.646 52.381 0.00 0.00 0.00 3.66
4748 5783 3.904136 CCTCTGTGGCTAAACTGTTTG 57.096 47.619 15.69 7.10 0.00 2.93
4754 5789 7.159322 TCTGTGGCTAAACTGTTTGTTAAAA 57.841 32.000 15.69 0.00 38.03 1.52
4826 5861 1.789506 AGCTGACGAGAAAACTGAGC 58.210 50.000 0.00 0.00 0.00 4.26
4834 5869 3.181465 ACGAGAAAACTGAGCCAGAAGAA 60.181 43.478 8.91 0.00 35.18 2.52
4867 5902 5.568685 TTCTATCCGAGACAACAGAGAAG 57.431 43.478 0.00 0.00 32.31 2.85
4876 5911 1.001406 ACAACAGAGAAGAAGGGCGAG 59.999 52.381 0.00 0.00 0.00 5.03
5110 6145 8.019669 CGATGATTTGGAAACCATGATCTTATC 58.980 37.037 0.00 0.00 31.53 1.75
5400 6435 3.713826 TCCTTCACTTCCATGTTACCC 57.286 47.619 0.00 0.00 0.00 3.69
5422 6457 5.336055 CCCGTGCCTTGTTTTTACATTGATA 60.336 40.000 0.00 0.00 0.00 2.15
5504 6539 9.077885 ACTGCTAAAAGGAATAACAAGATGAAA 57.922 29.630 0.00 0.00 0.00 2.69
5584 6619 5.504853 TGATGTGCAGGTATATTTTGGACA 58.495 37.500 9.59 9.59 45.08 4.02
5593 6629 7.702348 GCAGGTATATTTTGGACAAGAAACATC 59.298 37.037 0.00 0.00 0.00 3.06
5703 6739 2.965572 TCCTTGGTATCGTTTACCGG 57.034 50.000 0.00 0.00 40.39 5.28
5909 6945 6.403866 TTTGTGTCTTCAATGGCACTTATT 57.596 33.333 0.00 0.00 33.44 1.40
5938 6974 5.458041 AATTTTCATGTTCTGTCACTGGG 57.542 39.130 0.00 0.00 0.00 4.45
5952 6998 2.076863 CACTGGGAATTTGACTCCGAC 58.923 52.381 0.00 0.00 33.36 4.79
5953 6999 1.978580 ACTGGGAATTTGACTCCGACT 59.021 47.619 0.00 0.00 33.36 4.18
5954 7000 3.056107 CACTGGGAATTTGACTCCGACTA 60.056 47.826 0.00 0.00 33.36 2.59
5955 7001 3.195825 ACTGGGAATTTGACTCCGACTAG 59.804 47.826 0.00 0.00 33.36 2.57
5956 7002 2.500098 TGGGAATTTGACTCCGACTAGG 59.500 50.000 0.00 0.00 42.97 3.02
5957 7003 2.158943 GGGAATTTGACTCCGACTAGGG 60.159 54.545 0.00 0.00 41.52 3.53
6038 7084 2.094762 ATGTCGGTGCTTGTAGAACC 57.905 50.000 0.00 0.00 40.78 3.62
6060 7106 4.381612 CCGAGAAACTGAATAGCCACAGTA 60.382 45.833 0.00 0.00 44.94 2.74
6095 7145 5.296748 ACAATAGCCACAATTGTTTTGACC 58.703 37.500 8.77 0.00 43.31 4.02
6099 7149 3.130633 GCCACAATTGTTTTGACCCTTC 58.869 45.455 8.77 0.00 0.00 3.46
6111 7161 6.945435 TGTTTTGACCCTTCTATTGCTATCAA 59.055 34.615 0.00 0.00 36.51 2.57
6263 7313 2.957402 TTCCTGCCAGTGAATTGTCT 57.043 45.000 0.00 0.00 0.00 3.41
6364 7539 3.023946 TGTGGAAATTTTCATGTGCCG 57.976 42.857 1.62 0.00 0.00 5.69
6447 7705 3.553511 CGCCAGCTTCTATTTCTGTACAG 59.446 47.826 17.17 17.17 0.00 2.74
6450 7708 5.686124 GCCAGCTTCTATTTCTGTACAGGAT 60.686 44.000 22.48 17.74 0.00 3.24
6498 7756 0.824109 TCAGTACCGCTGGAATGGAG 59.176 55.000 1.50 0.00 45.08 3.86
6676 7934 1.285078 GGGCTGAAGGAAAGGTACCAT 59.715 52.381 15.94 0.00 0.00 3.55
6677 7935 2.644676 GGCTGAAGGAAAGGTACCATC 58.355 52.381 15.94 11.80 0.00 3.51
6678 7936 2.026262 GGCTGAAGGAAAGGTACCATCA 60.026 50.000 15.94 7.40 34.65 3.07
6679 7937 3.010420 GCTGAAGGAAAGGTACCATCAC 58.990 50.000 15.94 6.42 32.82 3.06
6680 7938 3.307762 GCTGAAGGAAAGGTACCATCACT 60.308 47.826 15.94 8.45 32.82 3.41
6681 7939 4.807643 GCTGAAGGAAAGGTACCATCACTT 60.808 45.833 15.94 15.40 32.82 3.16
6682 7940 5.316987 CTGAAGGAAAGGTACCATCACTTT 58.683 41.667 15.94 5.14 37.16 2.66
6683 7941 5.070001 TGAAGGAAAGGTACCATCACTTTG 58.930 41.667 15.94 0.00 34.82 2.77
6684 7942 3.421844 AGGAAAGGTACCATCACTTTGC 58.578 45.455 15.94 10.58 41.14 3.68
6685 7943 3.153919 GGAAAGGTACCATCACTTTGCA 58.846 45.455 15.94 0.00 40.72 4.08
6686 7944 3.572255 GGAAAGGTACCATCACTTTGCAA 59.428 43.478 15.94 0.00 40.72 4.08
6687 7945 4.038642 GGAAAGGTACCATCACTTTGCAAA 59.961 41.667 15.94 12.14 40.72 3.68
6688 7946 4.584327 AAGGTACCATCACTTTGCAAAC 57.416 40.909 15.94 0.00 0.00 2.93
6689 7947 3.561143 AGGTACCATCACTTTGCAAACA 58.439 40.909 15.94 0.00 0.00 2.83
6690 7948 4.151883 AGGTACCATCACTTTGCAAACAT 58.848 39.130 15.94 0.00 0.00 2.71
6691 7949 4.218417 AGGTACCATCACTTTGCAAACATC 59.782 41.667 15.94 0.00 0.00 3.06
6692 7950 4.218417 GGTACCATCACTTTGCAAACATCT 59.782 41.667 8.05 0.00 0.00 2.90
6693 7951 4.510038 ACCATCACTTTGCAAACATCTC 57.490 40.909 8.05 0.00 0.00 2.75
6694 7952 3.256631 ACCATCACTTTGCAAACATCTCC 59.743 43.478 8.05 0.00 0.00 3.71
6695 7953 3.256383 CCATCACTTTGCAAACATCTCCA 59.744 43.478 8.05 0.00 0.00 3.86
6696 7954 4.262121 CCATCACTTTGCAAACATCTCCAA 60.262 41.667 8.05 0.00 0.00 3.53
6697 7955 4.998671 TCACTTTGCAAACATCTCCAAA 57.001 36.364 8.05 0.00 0.00 3.28
6698 7956 5.534207 TCACTTTGCAAACATCTCCAAAT 57.466 34.783 8.05 0.00 0.00 2.32
6699 7957 5.916318 TCACTTTGCAAACATCTCCAAATT 58.084 33.333 8.05 0.00 0.00 1.82
6700 7958 5.984926 TCACTTTGCAAACATCTCCAAATTC 59.015 36.000 8.05 0.00 0.00 2.17
6701 7959 4.984161 ACTTTGCAAACATCTCCAAATTCG 59.016 37.500 8.05 0.00 0.00 3.34
6702 7960 4.582701 TTGCAAACATCTCCAAATTCGT 57.417 36.364 0.00 0.00 0.00 3.85
6703 7961 4.582701 TGCAAACATCTCCAAATTCGTT 57.417 36.364 0.00 0.00 0.00 3.85
6704 7962 4.545610 TGCAAACATCTCCAAATTCGTTC 58.454 39.130 0.00 0.00 0.00 3.95
6705 7963 3.920412 GCAAACATCTCCAAATTCGTTCC 59.080 43.478 0.00 0.00 0.00 3.62
6706 7964 4.321230 GCAAACATCTCCAAATTCGTTCCT 60.321 41.667 0.00 0.00 0.00 3.36
6707 7965 5.393962 CAAACATCTCCAAATTCGTTCCTC 58.606 41.667 0.00 0.00 0.00 3.71
6708 7966 3.610911 ACATCTCCAAATTCGTTCCTCC 58.389 45.455 0.00 0.00 0.00 4.30
6709 7967 3.009033 ACATCTCCAAATTCGTTCCTCCA 59.991 43.478 0.00 0.00 0.00 3.86
6710 7968 3.334583 TCTCCAAATTCGTTCCTCCAG 57.665 47.619 0.00 0.00 0.00 3.86
6711 7969 2.637872 TCTCCAAATTCGTTCCTCCAGT 59.362 45.455 0.00 0.00 0.00 4.00
6712 7970 3.835978 TCTCCAAATTCGTTCCTCCAGTA 59.164 43.478 0.00 0.00 0.00 2.74
6713 7971 4.469945 TCTCCAAATTCGTTCCTCCAGTAT 59.530 41.667 0.00 0.00 0.00 2.12
6714 7972 4.513442 TCCAAATTCGTTCCTCCAGTATG 58.487 43.478 0.00 0.00 0.00 2.39
6715 7973 4.019681 TCCAAATTCGTTCCTCCAGTATGT 60.020 41.667 0.00 0.00 0.00 2.29
6716 7974 4.094887 CCAAATTCGTTCCTCCAGTATGTG 59.905 45.833 0.00 0.00 0.00 3.21
6717 7975 4.819105 AATTCGTTCCTCCAGTATGTGA 57.181 40.909 0.00 0.00 0.00 3.58
6718 7976 4.819105 ATTCGTTCCTCCAGTATGTGAA 57.181 40.909 0.00 0.00 0.00 3.18
6719 7977 4.610605 TTCGTTCCTCCAGTATGTGAAA 57.389 40.909 0.00 0.00 0.00 2.69
6720 7978 3.921677 TCGTTCCTCCAGTATGTGAAAC 58.078 45.455 0.00 0.00 37.35 2.78
6763 8021 5.012328 AGCTGTGCCTACTATCAAACTAC 57.988 43.478 0.00 0.00 0.00 2.73
6764 8022 4.712337 AGCTGTGCCTACTATCAAACTACT 59.288 41.667 0.00 0.00 0.00 2.57
6765 8023 5.044558 GCTGTGCCTACTATCAAACTACTC 58.955 45.833 0.00 0.00 0.00 2.59
6766 8024 5.593010 CTGTGCCTACTATCAAACTACTCC 58.407 45.833 0.00 0.00 0.00 3.85
6767 8025 4.404715 TGTGCCTACTATCAAACTACTCCC 59.595 45.833 0.00 0.00 0.00 4.30
6768 8026 4.650131 GTGCCTACTATCAAACTACTCCCT 59.350 45.833 0.00 0.00 0.00 4.20
6769 8027 4.894114 TGCCTACTATCAAACTACTCCCTC 59.106 45.833 0.00 0.00 0.00 4.30
6770 8028 4.281435 GCCTACTATCAAACTACTCCCTCC 59.719 50.000 0.00 0.00 0.00 4.30
6771 8029 4.519730 CCTACTATCAAACTACTCCCTCCG 59.480 50.000 0.00 0.00 0.00 4.63
6772 8030 3.978610 ACTATCAAACTACTCCCTCCGT 58.021 45.455 0.00 0.00 0.00 4.69
6773 8031 3.952967 ACTATCAAACTACTCCCTCCGTC 59.047 47.826 0.00 0.00 0.00 4.79
6774 8032 1.553706 TCAAACTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
6775 8033 1.203087 TCAAACTACTCCCTCCGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
6776 8034 1.831736 CAAACTACTCCCTCCGTCCAT 59.168 52.381 0.00 0.00 0.00 3.41
6777 8035 3.028850 CAAACTACTCCCTCCGTCCATA 58.971 50.000 0.00 0.00 0.00 2.74
6778 8036 3.393426 AACTACTCCCTCCGTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
6779 8037 3.614568 ACTACTCCCTCCGTCCATAAT 57.385 47.619 0.00 0.00 0.00 1.28
6780 8038 4.736611 ACTACTCCCTCCGTCCATAATA 57.263 45.455 0.00 0.00 0.00 0.98
6781 8039 5.272405 ACTACTCCCTCCGTCCATAATAT 57.728 43.478 0.00 0.00 0.00 1.28
6782 8040 6.398655 ACTACTCCCTCCGTCCATAATATA 57.601 41.667 0.00 0.00 0.00 0.86
6783 8041 6.797707 ACTACTCCCTCCGTCCATAATATAA 58.202 40.000 0.00 0.00 0.00 0.98
6784 8042 6.890814 ACTACTCCCTCCGTCCATAATATAAG 59.109 42.308 0.00 0.00 0.00 1.73
6785 8043 5.900437 ACTCCCTCCGTCCATAATATAAGA 58.100 41.667 0.00 0.00 0.00 2.10
6786 8044 5.952947 ACTCCCTCCGTCCATAATATAAGAG 59.047 44.000 0.00 0.00 0.00 2.85
6787 8045 5.900437 TCCCTCCGTCCATAATATAAGAGT 58.100 41.667 0.00 0.00 0.00 3.24
6788 8046 5.715279 TCCCTCCGTCCATAATATAAGAGTG 59.285 44.000 0.00 0.00 0.00 3.51
6789 8047 5.480772 CCCTCCGTCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
6790 8048 6.014499 CCCTCCGTCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
6791 8049 7.442656 CCTCCGTCCATAATATAAGAGTGTTT 58.557 38.462 0.00 0.00 0.00 2.83
6792 8050 7.931948 CCTCCGTCCATAATATAAGAGTGTTTT 59.068 37.037 0.00 0.00 0.00 2.43
6793 8051 9.326413 CTCCGTCCATAATATAAGAGTGTTTTT 57.674 33.333 0.00 0.00 0.00 1.94
6820 8078 4.743644 ACTACACTAGTGTCAAAAACGCTC 59.256 41.667 31.11 0.00 45.69 5.03
6821 8079 3.793559 ACACTAGTGTCAAAAACGCTCT 58.206 40.909 22.95 0.00 45.69 4.09
6822 8080 4.189231 ACACTAGTGTCAAAAACGCTCTT 58.811 39.130 22.95 0.00 45.69 2.85
6823 8081 5.353938 ACACTAGTGTCAAAAACGCTCTTA 58.646 37.500 22.95 0.00 45.69 2.10
6824 8082 5.989777 ACACTAGTGTCAAAAACGCTCTTAT 59.010 36.000 22.95 0.00 45.69 1.73
6825 8083 7.149973 ACACTAGTGTCAAAAACGCTCTTATA 58.850 34.615 22.95 0.00 45.69 0.98
6826 8084 7.817962 ACACTAGTGTCAAAAACGCTCTTATAT 59.182 33.333 22.95 0.00 45.69 0.86
6827 8085 8.656849 CACTAGTGTCAAAAACGCTCTTATATT 58.343 33.333 15.06 0.00 45.69 1.28
6828 8086 9.865321 ACTAGTGTCAAAAACGCTCTTATATTA 57.135 29.630 0.00 0.00 45.69 0.98
6831 8089 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
6832 8090 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
6833 8091 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
6834 8092 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
6835 8093 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
6836 8094 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
6837 8095 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
6838 8096 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
6839 8097 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
6840 8098 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
6841 8099 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
6842 8100 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
6843 8101 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
6844 8102 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
6863 8121 7.368198 GGAGTAGTAAAGATCTCTCCCAAAT 57.632 40.000 12.77 0.00 36.46 2.32
6864 8122 7.213678 GGAGTAGTAAAGATCTCTCCCAAATG 58.786 42.308 12.77 0.00 36.46 2.32
6898 8158 9.088987 TCCAAATAGTTTAGCTGAAGGAAAATT 57.911 29.630 0.00 0.00 0.00 1.82
7145 8409 8.418597 TCAGAAGGTAAGTTGTATAACTGACT 57.581 34.615 16.88 8.33 46.14 3.41
7410 8681 3.632604 TGATGAACCTAGCTAGACCTTCG 59.367 47.826 22.70 6.61 0.00 3.79
7504 8784 4.283467 AGGGGGCTTTTTGTTATCTGTTTC 59.717 41.667 0.00 0.00 0.00 2.78
7541 8821 1.077429 GCGGGGAGCTCCTCAATTT 60.077 57.895 31.90 0.00 44.04 1.82
7668 8963 5.397142 AAGTTTCTCCTTCATCCATTTGC 57.603 39.130 0.00 0.00 0.00 3.68
7672 8967 6.042437 AGTTTCTCCTTCATCCATTTGCTTTT 59.958 34.615 0.00 0.00 0.00 2.27
7707 9002 4.997395 ACATTTCGTGTAACAGCTCAGATT 59.003 37.500 0.00 0.00 39.91 2.40
7713 9008 4.268644 CGTGTAACAGCTCAGATTACCATG 59.731 45.833 0.00 0.00 35.74 3.66
7714 9009 4.034510 GTGTAACAGCTCAGATTACCATGC 59.965 45.833 0.00 0.00 36.32 4.06
7715 9010 3.354948 AACAGCTCAGATTACCATGCA 57.645 42.857 0.00 0.00 0.00 3.96
7716 9011 3.572632 ACAGCTCAGATTACCATGCAT 57.427 42.857 0.00 0.00 0.00 3.96
7717 9012 3.474600 ACAGCTCAGATTACCATGCATC 58.525 45.455 0.00 0.00 0.00 3.91
7718 9013 2.812591 CAGCTCAGATTACCATGCATCC 59.187 50.000 0.00 0.00 0.00 3.51
7720 9015 2.487805 GCTCAGATTACCATGCATCCCA 60.488 50.000 0.00 0.00 0.00 4.37
7721 9016 3.813240 GCTCAGATTACCATGCATCCCAT 60.813 47.826 0.00 0.00 33.39 4.00
7740 9040 8.632679 CATCCCATTACACATTATTTTGCTACT 58.367 33.333 0.00 0.00 0.00 2.57
7766 9066 5.825507 GGATATTTCCACTCTGTTTCATGC 58.174 41.667 0.00 0.00 42.12 4.06
7767 9067 5.591877 GGATATTTCCACTCTGTTTCATGCT 59.408 40.000 0.00 0.00 42.12 3.79
7793 9093 8.648422 TGACATTTTTAATTCGTTACATCGTG 57.352 30.769 0.00 0.00 0.00 4.35
7796 9096 7.747357 ACATTTTTAATTCGTTACATCGTGACC 59.253 33.333 0.00 0.00 0.00 4.02
7802 9102 4.502171 TCGTTACATCGTGACCAACTAA 57.498 40.909 0.00 0.00 0.00 2.24
7805 9105 4.445052 CGTTACATCGTGACCAACTAAACA 59.555 41.667 0.00 0.00 0.00 2.83
7970 9270 3.118531 GGACATATGGGATATCAGCCCT 58.881 50.000 7.80 0.00 46.19 5.19
8107 9408 5.308014 TGTATAGGCATATGCAAGTTCTGG 58.692 41.667 28.07 0.00 44.36 3.86
8368 9674 1.232792 AGCACCCCCAGCTTTGAAA 59.767 52.632 0.00 0.00 39.87 2.69
8385 9691 6.128902 GCTTTGAAATGAGAATGCAGAAGTTG 60.129 38.462 0.00 0.00 0.00 3.16
8386 9692 5.381174 TGAAATGAGAATGCAGAAGTTGG 57.619 39.130 0.00 0.00 0.00 3.77
8452 9758 0.532573 TCAGAGTCTTCCATCACGGC 59.467 55.000 0.00 0.00 33.14 5.68
8475 9781 4.504514 CCATAGAGCATGTCCAATAGCAGT 60.505 45.833 0.00 0.00 32.21 4.40
8507 9821 1.198713 CAGTAGCAGTGGTCCCTCAT 58.801 55.000 0.00 0.00 0.00 2.90
8642 9956 2.613725 GCTGCTGCCCTAAAATTTGCTT 60.614 45.455 3.85 0.00 0.00 3.91
8705 10019 6.629182 TTTACGTTACTTTGTGCCAAAAAC 57.371 33.333 0.00 4.39 0.00 2.43
8712 10026 1.634702 TTGTGCCAAAAACGTTGCTC 58.365 45.000 0.00 2.37 0.00 4.26
8717 10031 1.737363 GCCAAAAACGTTGCTCCAACA 60.737 47.619 0.00 0.00 43.70 3.33
8737 10051 2.457366 ACTGCGCTATAATAGGCCAC 57.543 50.000 9.73 0.00 0.00 5.01
8738 10052 1.002087 ACTGCGCTATAATAGGCCACC 59.998 52.381 9.73 0.00 0.00 4.61
8739 10053 0.323629 TGCGCTATAATAGGCCACCC 59.676 55.000 9.73 0.00 0.00 4.61
8740 10054 0.613777 GCGCTATAATAGGCCACCCT 59.386 55.000 5.01 0.00 45.61 4.34
8742 10056 2.235402 GCGCTATAATAGGCCACCCTAA 59.765 50.000 5.01 0.00 46.47 2.69
8743 10057 3.118371 GCGCTATAATAGGCCACCCTAAT 60.118 47.826 5.01 0.00 46.47 1.73
8744 10058 4.442706 CGCTATAATAGGCCACCCTAATG 58.557 47.826 5.01 0.00 46.47 1.90
8745 10059 4.081087 CGCTATAATAGGCCACCCTAATGT 60.081 45.833 5.01 0.00 46.47 2.71
8746 10060 5.128171 CGCTATAATAGGCCACCCTAATGTA 59.872 44.000 5.01 0.00 46.47 2.29
8747 10061 6.183360 CGCTATAATAGGCCACCCTAATGTAT 60.183 42.308 5.01 0.00 46.47 2.29
8748 10062 7.574607 GCTATAATAGGCCACCCTAATGTATT 58.425 38.462 5.01 0.00 46.47 1.89
8749 10063 8.053355 GCTATAATAGGCCACCCTAATGTATTT 58.947 37.037 5.01 0.00 46.47 1.40
8750 10064 9.975218 CTATAATAGGCCACCCTAATGTATTTT 57.025 33.333 5.01 0.00 46.47 1.82
8752 10066 9.975218 ATAATAGGCCACCCTAATGTATTTTAG 57.025 33.333 5.01 0.00 46.47 1.85
8753 10067 5.061721 AGGCCACCCTAATGTATTTTAGG 57.938 43.478 5.01 3.71 45.30 2.69
8762 10076 7.404671 CCTAATGTATTTTAGGGCTGTTGTT 57.595 36.000 2.88 0.00 43.04 2.83
8763 10077 7.257722 CCTAATGTATTTTAGGGCTGTTGTTG 58.742 38.462 2.88 0.00 43.04 3.33
8764 10078 5.659440 ATGTATTTTAGGGCTGTTGTTGG 57.341 39.130 0.00 0.00 0.00 3.77
8765 10079 4.730966 TGTATTTTAGGGCTGTTGTTGGA 58.269 39.130 0.00 0.00 0.00 3.53
8766 10080 4.764823 TGTATTTTAGGGCTGTTGTTGGAG 59.235 41.667 0.00 0.00 0.00 3.86
8767 10081 3.586470 TTTTAGGGCTGTTGTTGGAGA 57.414 42.857 0.00 0.00 0.00 3.71
8768 10082 3.806949 TTTAGGGCTGTTGTTGGAGAT 57.193 42.857 0.00 0.00 0.00 2.75
8769 10083 4.919774 TTTAGGGCTGTTGTTGGAGATA 57.080 40.909 0.00 0.00 0.00 1.98
8770 10084 2.789409 AGGGCTGTTGTTGGAGATAC 57.211 50.000 0.00 0.00 0.00 2.24
8771 10085 1.985159 AGGGCTGTTGTTGGAGATACA 59.015 47.619 0.00 0.00 0.00 2.29
8772 10086 2.578021 AGGGCTGTTGTTGGAGATACAT 59.422 45.455 0.00 0.00 0.00 2.29
8773 10087 3.780294 AGGGCTGTTGTTGGAGATACATA 59.220 43.478 0.00 0.00 0.00 2.29
8774 10088 4.413520 AGGGCTGTTGTTGGAGATACATAT 59.586 41.667 0.00 0.00 0.00 1.78
8775 10089 5.103940 AGGGCTGTTGTTGGAGATACATATT 60.104 40.000 0.00 0.00 0.00 1.28
8776 10090 5.594317 GGGCTGTTGTTGGAGATACATATTT 59.406 40.000 0.00 0.00 0.00 1.40
8777 10091 6.096846 GGGCTGTTGTTGGAGATACATATTTT 59.903 38.462 0.00 0.00 0.00 1.82
8778 10092 7.196331 GGCTGTTGTTGGAGATACATATTTTC 58.804 38.462 0.00 0.00 0.00 2.29
8779 10093 6.907212 GCTGTTGTTGGAGATACATATTTTCG 59.093 38.462 0.00 0.00 0.00 3.46
8780 10094 7.315247 TGTTGTTGGAGATACATATTTTCGG 57.685 36.000 0.00 0.00 0.00 4.30
8781 10095 6.317642 TGTTGTTGGAGATACATATTTTCGGG 59.682 38.462 0.00 0.00 0.00 5.14
8782 10096 5.996644 TGTTGGAGATACATATTTTCGGGT 58.003 37.500 0.00 0.00 0.00 5.28
8783 10097 5.820423 TGTTGGAGATACATATTTTCGGGTG 59.180 40.000 0.00 0.00 0.00 4.61
8784 10098 4.385825 TGGAGATACATATTTTCGGGTGC 58.614 43.478 0.00 0.00 0.00 5.01
8785 10099 3.751698 GGAGATACATATTTTCGGGTGCC 59.248 47.826 0.00 0.00 0.00 5.01
8786 10100 4.505039 GGAGATACATATTTTCGGGTGCCT 60.505 45.833 0.00 0.00 0.00 4.75
8787 10101 5.279809 GGAGATACATATTTTCGGGTGCCTA 60.280 44.000 0.00 0.00 0.00 3.93
8788 10102 6.182507 AGATACATATTTTCGGGTGCCTAA 57.817 37.500 0.00 0.00 0.00 2.69
8789 10103 6.597562 AGATACATATTTTCGGGTGCCTAAA 58.402 36.000 0.00 0.00 0.00 1.85
8790 10104 7.057894 AGATACATATTTTCGGGTGCCTAAAA 58.942 34.615 0.00 0.00 0.00 1.52
8791 10105 5.986501 ACATATTTTCGGGTGCCTAAAAA 57.013 34.783 0.00 5.45 0.00 1.94
8792 10106 6.538945 ACATATTTTCGGGTGCCTAAAAAT 57.461 33.333 13.95 13.95 33.91 1.82
8793 10107 7.648039 ACATATTTTCGGGTGCCTAAAAATA 57.352 32.000 16.07 16.07 35.43 1.40
8794 10108 8.068892 ACATATTTTCGGGTGCCTAAAAATAA 57.931 30.769 16.92 8.05 35.04 1.40
8795 10109 8.532819 ACATATTTTCGGGTGCCTAAAAATAAA 58.467 29.630 16.92 6.23 35.04 1.40
8796 10110 9.372369 CATATTTTCGGGTGCCTAAAAATAAAA 57.628 29.630 16.92 0.00 35.04 1.52
8798 10112 7.892778 TTTTCGGGTGCCTAAAAATAAAATC 57.107 32.000 0.00 0.00 0.00 2.17
8799 10113 6.591750 TTCGGGTGCCTAAAAATAAAATCA 57.408 33.333 0.00 0.00 0.00 2.57
8800 10114 6.783708 TCGGGTGCCTAAAAATAAAATCAT 57.216 33.333 0.00 0.00 0.00 2.45
8801 10115 7.176589 TCGGGTGCCTAAAAATAAAATCATT 57.823 32.000 0.00 0.00 0.00 2.57
8802 10116 7.616313 TCGGGTGCCTAAAAATAAAATCATTT 58.384 30.769 0.00 0.00 0.00 2.32
8803 10117 8.097662 TCGGGTGCCTAAAAATAAAATCATTTT 58.902 29.630 0.02 0.02 39.26 1.82
8804 10118 8.726068 CGGGTGCCTAAAAATAAAATCATTTTT 58.274 29.630 0.00 10.40 45.45 1.94
8833 10147 3.740384 CGTTTTACGCCAACCACTC 57.260 52.632 0.00 0.00 33.65 3.51
8834 10148 1.223187 CGTTTTACGCCAACCACTCT 58.777 50.000 0.00 0.00 33.65 3.24
8835 10149 1.600485 CGTTTTACGCCAACCACTCTT 59.400 47.619 0.00 0.00 33.65 2.85
8836 10150 2.032426 CGTTTTACGCCAACCACTCTTT 59.968 45.455 0.00 0.00 33.65 2.52
8837 10151 3.487879 CGTTTTACGCCAACCACTCTTTT 60.488 43.478 0.00 0.00 33.65 2.27
8838 10152 3.701532 TTTACGCCAACCACTCTTTTG 57.298 42.857 0.00 0.00 0.00 2.44
8839 10153 2.335316 TACGCCAACCACTCTTTTGT 57.665 45.000 0.00 0.00 0.00 2.83
8840 10154 0.738389 ACGCCAACCACTCTTTTGTG 59.262 50.000 0.00 0.00 37.66 3.33
8841 10155 0.594796 CGCCAACCACTCTTTTGTGC 60.595 55.000 0.00 0.00 36.68 4.57
8842 10156 0.249447 GCCAACCACTCTTTTGTGCC 60.249 55.000 0.00 0.00 36.68 5.01
8843 10157 0.389025 CCAACCACTCTTTTGTGCCC 59.611 55.000 0.00 0.00 36.68 5.36
8844 10158 1.402787 CAACCACTCTTTTGTGCCCT 58.597 50.000 0.00 0.00 36.68 5.19
8845 10159 2.582052 CAACCACTCTTTTGTGCCCTA 58.418 47.619 0.00 0.00 36.68 3.53
8846 10160 3.157087 CAACCACTCTTTTGTGCCCTAT 58.843 45.455 0.00 0.00 36.68 2.57
8847 10161 3.525800 ACCACTCTTTTGTGCCCTATT 57.474 42.857 0.00 0.00 36.68 1.73
8848 10162 4.650972 ACCACTCTTTTGTGCCCTATTA 57.349 40.909 0.00 0.00 36.68 0.98
8849 10163 5.193099 ACCACTCTTTTGTGCCCTATTAT 57.807 39.130 0.00 0.00 36.68 1.28
8850 10164 6.321821 ACCACTCTTTTGTGCCCTATTATA 57.678 37.500 0.00 0.00 36.68 0.98
8851 10165 6.357367 ACCACTCTTTTGTGCCCTATTATAG 58.643 40.000 0.00 0.00 36.68 1.31
8852 10166 5.765182 CCACTCTTTTGTGCCCTATTATAGG 59.235 44.000 11.20 11.20 39.03 2.57
8864 10178 5.957771 CCTATTATAGGGCTGCTATTGGA 57.042 43.478 10.34 0.00 42.42 3.53
8865 10179 5.923204 CCTATTATAGGGCTGCTATTGGAG 58.077 45.833 10.34 0.00 42.42 3.86
8866 10180 5.663106 CCTATTATAGGGCTGCTATTGGAGA 59.337 44.000 10.34 0.00 42.42 3.71
8867 10181 6.328672 CCTATTATAGGGCTGCTATTGGAGAT 59.671 42.308 10.34 0.00 42.42 2.75
8868 10182 7.510685 CCTATTATAGGGCTGCTATTGGAGATA 59.489 40.741 10.34 0.00 42.42 1.98
8869 10183 6.546428 TTATAGGGCTGCTATTGGAGATAC 57.454 41.667 0.00 0.00 33.10 2.24
8870 10184 2.983296 AGGGCTGCTATTGGAGATACT 58.017 47.619 0.00 0.00 33.10 2.12
8871 10185 2.903135 AGGGCTGCTATTGGAGATACTC 59.097 50.000 0.00 0.00 33.10 2.59
8872 10186 2.903135 GGGCTGCTATTGGAGATACTCT 59.097 50.000 0.00 0.00 33.10 3.24
8873 10187 4.090090 GGGCTGCTATTGGAGATACTCTA 58.910 47.826 0.00 0.00 33.10 2.43
8874 10188 4.528596 GGGCTGCTATTGGAGATACTCTAA 59.471 45.833 0.00 0.00 35.57 2.10
8875 10189 5.474825 GGCTGCTATTGGAGATACTCTAAC 58.525 45.833 0.00 0.00 34.03 2.34
8876 10190 5.011125 GGCTGCTATTGGAGATACTCTAACA 59.989 44.000 0.00 0.00 34.03 2.41
8877 10191 6.155827 GCTGCTATTGGAGATACTCTAACAG 58.844 44.000 0.00 0.00 34.03 3.16
8878 10192 6.239176 GCTGCTATTGGAGATACTCTAACAGT 60.239 42.308 0.00 0.00 34.03 3.55
8879 10193 7.661536 TGCTATTGGAGATACTCTAACAGTT 57.338 36.000 0.00 0.00 34.03 3.16
8880 10194 7.717568 TGCTATTGGAGATACTCTAACAGTTC 58.282 38.462 0.00 0.00 34.03 3.01
8881 10195 7.149307 GCTATTGGAGATACTCTAACAGTTCC 58.851 42.308 0.00 0.00 34.03 3.62
8882 10196 7.201920 GCTATTGGAGATACTCTAACAGTTCCA 60.202 40.741 0.00 0.00 37.64 3.53
8883 10197 7.682787 ATTGGAGATACTCTAACAGTTCCAT 57.317 36.000 0.00 0.00 38.71 3.41
8884 10198 7.496346 TTGGAGATACTCTAACAGTTCCATT 57.504 36.000 0.00 0.00 38.71 3.16
8885 10199 7.496346 TGGAGATACTCTAACAGTTCCATTT 57.504 36.000 0.00 0.00 35.43 2.32
8886 10200 7.918076 TGGAGATACTCTAACAGTTCCATTTT 58.082 34.615 0.00 0.00 35.43 1.82
8887 10201 8.383175 TGGAGATACTCTAACAGTTCCATTTTT 58.617 33.333 0.00 0.00 35.43 1.94
8888 10202 8.884726 GGAGATACTCTAACAGTTCCATTTTTC 58.115 37.037 0.00 0.00 36.43 2.29
8889 10203 8.794335 AGATACTCTAACAGTTCCATTTTTCC 57.206 34.615 0.00 0.00 36.43 3.13
8890 10204 8.383175 AGATACTCTAACAGTTCCATTTTTCCA 58.617 33.333 0.00 0.00 36.43 3.53
8891 10205 9.178758 GATACTCTAACAGTTCCATTTTTCCAT 57.821 33.333 0.00 0.00 36.43 3.41
8893 10207 8.934023 ACTCTAACAGTTCCATTTTTCCATAA 57.066 30.769 0.00 0.00 26.56 1.90
8894 10208 9.362151 ACTCTAACAGTTCCATTTTTCCATAAA 57.638 29.630 0.00 0.00 26.56 1.40
8897 10211 9.981114 CTAACAGTTCCATTTTTCCATAAAAGT 57.019 29.630 0.00 0.00 36.02 2.66
8899 10213 9.679661 AACAGTTCCATTTTTCCATAAAAGTTT 57.320 25.926 0.00 0.00 36.02 2.66
8900 10214 9.325198 ACAGTTCCATTTTTCCATAAAAGTTTC 57.675 29.630 0.00 0.00 36.02 2.78
8901 10215 9.546428 CAGTTCCATTTTTCCATAAAAGTTTCT 57.454 29.630 0.00 0.00 36.02 2.52
8902 10216 9.546428 AGTTCCATTTTTCCATAAAAGTTTCTG 57.454 29.630 0.00 0.00 36.02 3.02
8903 10217 9.541143 GTTCCATTTTTCCATAAAAGTTTCTGA 57.459 29.630 0.00 0.00 36.02 3.27
8910 10224 9.762933 TTTTCCATAAAAGTTTCTGATTTGGAG 57.237 29.630 0.00 0.00 31.04 3.86
8911 10225 7.466746 TCCATAAAAGTTTCTGATTTGGAGG 57.533 36.000 0.00 0.00 0.00 4.30
8912 10226 6.437162 TCCATAAAAGTTTCTGATTTGGAGGG 59.563 38.462 0.00 0.00 0.00 4.30
8913 10227 6.437162 CCATAAAAGTTTCTGATTTGGAGGGA 59.563 38.462 0.00 0.00 0.00 4.20
8914 10228 7.363268 CCATAAAAGTTTCTGATTTGGAGGGAG 60.363 40.741 0.00 0.00 0.00 4.30
8915 10229 4.731313 AAGTTTCTGATTTGGAGGGAGT 57.269 40.909 0.00 0.00 0.00 3.85
8916 10230 4.731313 AGTTTCTGATTTGGAGGGAGTT 57.269 40.909 0.00 0.00 0.00 3.01
8917 10231 4.401925 AGTTTCTGATTTGGAGGGAGTTG 58.598 43.478 0.00 0.00 0.00 3.16
8918 10232 4.104738 AGTTTCTGATTTGGAGGGAGTTGA 59.895 41.667 0.00 0.00 0.00 3.18
8919 10233 3.988976 TCTGATTTGGAGGGAGTTGAG 57.011 47.619 0.00 0.00 0.00 3.02
8920 10234 2.026822 TCTGATTTGGAGGGAGTTGAGC 60.027 50.000 0.00 0.00 0.00 4.26
8921 10235 1.704628 TGATTTGGAGGGAGTTGAGCA 59.295 47.619 0.00 0.00 0.00 4.26
8922 10236 2.108075 TGATTTGGAGGGAGTTGAGCAA 59.892 45.455 0.00 0.00 0.00 3.91
8923 10237 2.746279 TTTGGAGGGAGTTGAGCAAA 57.254 45.000 0.00 0.00 0.00 3.68
8924 10238 2.746279 TTGGAGGGAGTTGAGCAAAA 57.254 45.000 0.00 0.00 0.00 2.44
8925 10239 2.746279 TGGAGGGAGTTGAGCAAAAA 57.254 45.000 0.00 0.00 0.00 1.94
8957 10271 9.678247 GTTTTTGTAAACGTGAATTTTTAGTGG 57.322 29.630 0.00 0.00 34.79 4.00
8958 10272 7.452630 TTTGTAAACGTGAATTTTTAGTGGC 57.547 32.000 0.00 0.00 0.00 5.01
8959 10273 5.521544 TGTAAACGTGAATTTTTAGTGGCC 58.478 37.500 0.00 0.00 0.00 5.36
8960 10274 4.929819 AAACGTGAATTTTTAGTGGCCT 57.070 36.364 3.32 0.00 0.00 5.19
8961 10275 4.929819 AACGTGAATTTTTAGTGGCCTT 57.070 36.364 3.32 0.00 0.00 4.35
8962 10276 4.929819 ACGTGAATTTTTAGTGGCCTTT 57.070 36.364 3.32 0.00 0.00 3.11
8963 10277 6.394025 AACGTGAATTTTTAGTGGCCTTTA 57.606 33.333 3.32 0.00 0.00 1.85
8964 10278 6.584185 ACGTGAATTTTTAGTGGCCTTTAT 57.416 33.333 3.32 0.00 0.00 1.40
8965 10279 7.690952 ACGTGAATTTTTAGTGGCCTTTATA 57.309 32.000 3.32 0.00 0.00 0.98
8966 10280 7.758495 ACGTGAATTTTTAGTGGCCTTTATAG 58.242 34.615 3.32 0.00 0.00 1.31
8967 10281 7.392393 ACGTGAATTTTTAGTGGCCTTTATAGT 59.608 33.333 3.32 0.00 0.00 2.12
8968 10282 8.241367 CGTGAATTTTTAGTGGCCTTTATAGTT 58.759 33.333 3.32 0.00 0.00 2.24
8971 10285 9.731819 GAATTTTTAGTGGCCTTTATAGTTAGC 57.268 33.333 3.32 0.00 0.00 3.09
8972 10286 7.634671 TTTTTAGTGGCCTTTATAGTTAGCC 57.365 36.000 3.32 0.00 44.13 3.93
8973 10287 3.859061 AGTGGCCTTTATAGTTAGCCC 57.141 47.619 3.32 0.00 43.18 5.19
8974 10288 3.120108 AGTGGCCTTTATAGTTAGCCCA 58.880 45.455 3.32 0.00 43.18 5.36
8975 10289 3.526019 AGTGGCCTTTATAGTTAGCCCAA 59.474 43.478 3.32 0.00 43.18 4.12
8976 10290 3.630769 GTGGCCTTTATAGTTAGCCCAAC 59.369 47.826 3.32 0.00 43.18 3.77
8978 10292 4.135306 GGCCTTTATAGTTAGCCCAACTC 58.865 47.826 4.66 0.00 44.48 3.01
8979 10293 4.135306 GCCTTTATAGTTAGCCCAACTCC 58.865 47.826 4.66 0.00 44.48 3.85
8980 10294 4.715713 CCTTTATAGTTAGCCCAACTCCC 58.284 47.826 4.66 0.00 44.48 4.30
8981 10295 4.445879 CCTTTATAGTTAGCCCAACTCCCC 60.446 50.000 4.66 0.00 44.48 4.81
8982 10296 1.519498 ATAGTTAGCCCAACTCCCCC 58.481 55.000 4.66 0.00 44.48 5.40
8983 10297 0.420272 TAGTTAGCCCAACTCCCCCT 59.580 55.000 4.66 0.00 44.48 4.79
8984 10298 0.914902 AGTTAGCCCAACTCCCCCTC 60.915 60.000 0.00 0.00 44.48 4.30
8985 10299 1.618447 TTAGCCCAACTCCCCCTCC 60.618 63.158 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.577046 TTCAAAGTGAAACGGTTTGAACCAATA 60.577 33.333 11.43 0.00 42.40 1.90
8 9 6.794675 TTCAAAGTGAAACGGTTTGAACCAAT 60.795 34.615 11.43 0.00 42.40 3.16
9 10 5.509163 TTCAAAGTGAAACGGTTTGAACCAA 60.509 36.000 11.43 0.00 42.40 3.67
10 11 4.022242 TTCAAAGTGAAACGGTTTGAACCA 60.022 37.500 11.43 0.00 42.40 3.67
11 12 4.099380 TCAAAGTGAAACGGTTTGAACC 57.901 40.909 11.43 2.75 45.86 3.62
12 13 6.455045 TTTTCAAAGTGAAACGGTTTGAAC 57.545 33.333 11.43 9.10 44.99 3.18
57 58 1.228154 ACGCCCCTCCAAGTGAAAC 60.228 57.895 0.00 0.00 0.00 2.78
66 67 0.903236 ACTAGAAAAGACGCCCCTCC 59.097 55.000 0.00 0.00 0.00 4.30
68 69 1.975680 TCAACTAGAAAAGACGCCCCT 59.024 47.619 0.00 0.00 0.00 4.79
70 71 3.254892 CTCTCAACTAGAAAAGACGCCC 58.745 50.000 0.00 0.00 32.46 6.13
73 74 4.739195 CTCCCTCTCAACTAGAAAAGACG 58.261 47.826 0.00 0.00 32.46 4.18
75 76 4.160329 TGCTCCCTCTCAACTAGAAAAGA 58.840 43.478 0.00 0.00 32.46 2.52
93 94 2.222819 CGTCTTGATACGCCTTTTGCTC 60.223 50.000 0.00 0.00 38.05 4.26
100 101 1.731424 CGTTGTCGTCTTGATACGCCT 60.731 52.381 0.00 0.00 42.56 5.52
101 102 0.638746 CGTTGTCGTCTTGATACGCC 59.361 55.000 0.00 0.00 42.56 5.68
134 135 0.971386 GACGGGGAAGGACTTGTACA 59.029 55.000 0.00 0.00 0.00 2.90
136 137 0.115745 AGGACGGGGAAGGACTTGTA 59.884 55.000 0.00 0.00 0.00 2.41
138 139 1.597461 GAGGACGGGGAAGGACTTG 59.403 63.158 0.00 0.00 0.00 3.16
149 154 1.153823 AGCATCGAAACGAGGACGG 60.154 57.895 9.81 0.00 40.15 4.79
172 177 2.390599 GCCTCGCTGCGATGACAAA 61.391 57.895 27.29 4.41 34.61 2.83
185 190 2.490217 CACCCTCTACACGCCTCG 59.510 66.667 0.00 0.00 0.00 4.63
195 200 2.529389 GGGGACACACCACCCTCT 60.529 66.667 0.00 0.00 44.97 3.69
271 276 4.162640 CGTCATCCGCTTTCACGA 57.837 55.556 0.00 0.00 34.06 4.35
396 401 4.452733 GGCGGTCGGGAAGTCTGG 62.453 72.222 0.00 0.00 0.00 3.86
435 541 3.312421 TCTCGGTGAAGAAAACTTGCTTG 59.688 43.478 0.00 0.00 0.00 4.01
436 542 3.541632 TCTCGGTGAAGAAAACTTGCTT 58.458 40.909 0.00 0.00 0.00 3.91
437 543 3.194005 TCTCGGTGAAGAAAACTTGCT 57.806 42.857 0.00 0.00 0.00 3.91
438 544 3.365364 CCATCTCGGTGAAGAAAACTTGC 60.365 47.826 0.00 0.00 0.00 4.01
497 604 4.408821 TCCTGCATCCACCGCCAC 62.409 66.667 0.00 0.00 0.00 5.01
500 607 1.372087 CTTTCTCCTGCATCCACCGC 61.372 60.000 0.00 0.00 0.00 5.68
529 636 6.388619 ACATCTTCATAGTTTAGGGGTGTT 57.611 37.500 0.00 0.00 0.00 3.32
560 668 7.918562 GTCCTCACAAAAGCACTTACAAAAATA 59.081 33.333 0.00 0.00 0.00 1.40
574 682 4.130118 AGTAGCACAAGTCCTCACAAAAG 58.870 43.478 0.00 0.00 0.00 2.27
586 694 6.095440 AGGCCACATATTAAAAGTAGCACAAG 59.905 38.462 5.01 0.00 0.00 3.16
714 825 1.794222 CATTTCGACGGCTGGGAAC 59.206 57.895 0.00 0.00 0.00 3.62
750 861 2.052690 GCCGTGTCAGGGAGAGCTA 61.053 63.158 15.84 0.00 0.00 3.32
760 871 4.306967 TCATGTGCCGCCGTGTCA 62.307 61.111 0.00 0.00 0.00 3.58
821 946 3.943691 GGTACACGTGTGGGGGCA 61.944 66.667 30.83 7.00 34.19 5.36
1294 1439 1.964373 CCGAAACCGGGGAACACAG 60.964 63.158 6.32 0.00 43.22 3.66
1316 1462 2.435737 GCGCGCGCACAAAATCAAT 61.436 52.632 46.11 0.00 41.49 2.57
1391 1537 8.115491 TCAGAATACATTCGTCGAAGTTTATG 57.885 34.615 13.88 8.70 41.56 1.90
1471 1617 9.507329 AAGAATTTCTCAGAATTTGCTACTGTA 57.493 29.630 0.00 0.00 33.93 2.74
1489 1635 2.938869 GTGCAGGCACAGAAGAATTTC 58.061 47.619 18.84 0.00 45.53 2.17
1504 1650 2.987547 CAAGGGGTGGCTGTGCAG 60.988 66.667 0.00 0.00 0.00 4.41
1666 1823 2.806945 TTCTACTCCCCAATGGCAAG 57.193 50.000 0.00 0.00 0.00 4.01
1676 1833 3.620488 TCACCATTTGCATTCTACTCCC 58.380 45.455 0.00 0.00 0.00 4.30
1748 2223 5.462068 GTCAAAACTAAAAACTGCATGGGAC 59.538 40.000 0.00 0.00 0.00 4.46
1808 2763 6.038161 TGCAAGAACAACAATATTAGGATCCG 59.962 38.462 5.98 0.00 0.00 4.18
2143 3098 4.716784 TCTTCCCTGCAGTACACAGATAAT 59.283 41.667 13.81 0.00 37.32 1.28
2238 3193 5.516044 TGACTAGCAACATCCTCTAGGTTA 58.484 41.667 0.00 0.00 35.36 2.85
2297 3252 5.122519 TGGCTCTGCGATAATTTTGATACA 58.877 37.500 0.00 0.00 0.00 2.29
2419 3374 8.997323 ACTGCATAAAGAATATAAGTCAGATGC 58.003 33.333 0.00 0.00 37.16 3.91
2771 3728 5.418310 AAACCAACATAGTCAACACTTCG 57.582 39.130 0.00 0.00 33.62 3.79
2828 3789 7.287696 TCTGGAGATACAGCATCAGTTATAACA 59.712 37.037 17.65 0.00 38.36 2.41
2829 3790 7.661968 TCTGGAGATACAGCATCAGTTATAAC 58.338 38.462 7.57 7.57 38.36 1.89
2910 3872 0.821711 TCCCTTCAACCACTTTGCCG 60.822 55.000 0.00 0.00 34.88 5.69
2928 3890 3.077359 CCAGTGTTTTCTCCCATCAGTC 58.923 50.000 0.00 0.00 0.00 3.51
2967 3929 1.004628 ACATCATGTGCCACAGCCTTA 59.995 47.619 3.00 0.00 38.69 2.69
3018 3980 6.898041 TGTTGACCAAAGACGAAGATTATTG 58.102 36.000 0.00 0.00 0.00 1.90
3067 4029 0.815734 CCAGCATTGAAAGCTCCCAG 59.184 55.000 0.00 0.00 41.14 4.45
3078 4040 0.757561 TGGCATGATCCCCAGCATTG 60.758 55.000 0.00 0.00 0.00 2.82
3138 4100 9.043678 GTTTACGTTCAAAATAAATGTAGACGG 57.956 33.333 0.00 0.00 31.62 4.79
3158 4120 7.186021 AGTTGTTGAGAGTTAATGGTTTACG 57.814 36.000 0.00 0.00 0.00 3.18
3203 4172 6.015027 ACACAGTAACTACTAGCAAGACAG 57.985 41.667 0.00 0.00 34.13 3.51
3258 4227 8.665685 ACTATCAAAGTTATCAAACGATTGACC 58.334 33.333 10.54 2.27 41.19 4.02
3293 4262 6.184789 CCCAAATAGGTTTGTGTATACCAGT 58.815 40.000 0.00 0.00 42.50 4.00
3294 4263 6.184789 ACCCAAATAGGTTTGTGTATACCAG 58.815 40.000 0.00 0.00 42.50 4.00
3317 4286 6.577427 GGTGACGACATTTTTACATGAGAAAC 59.423 38.462 0.00 0.00 0.00 2.78
3324 4293 8.655651 AAAATTTGGTGACGACATTTTTACAT 57.344 26.923 0.00 0.00 0.00 2.29
3336 4305 8.977505 AGTATTTTCATGAAAAATTTGGTGACG 58.022 29.630 31.39 0.00 43.51 4.35
3373 4342 7.828717 TGACCATCAGCTTTTCTATTTACATGA 59.171 33.333 0.00 0.00 0.00 3.07
3396 4365 3.840890 TTGACACACAAAACACCTGAC 57.159 42.857 0.00 0.00 35.39 3.51
3412 4381 9.515020 TCTGTTCATTTTTACTTGTCATTTGAC 57.485 29.630 3.72 3.72 44.97 3.18
3450 4419 5.891551 ACAAACACCAGGTGAAGAAGTTATT 59.108 36.000 27.39 3.43 36.96 1.40
3540 4510 6.911250 TCTTGACACAGAGGAGTAATGTAA 57.089 37.500 0.00 0.00 0.00 2.41
3569 4539 3.118847 TGGACTGCATCTCATCAGACTTC 60.119 47.826 0.00 0.00 34.57 3.01
3611 4587 7.873719 TTCCATGTGAAAAGTTCTTCTACAA 57.126 32.000 0.00 0.00 0.00 2.41
3612 4588 7.466725 CGTTTCCATGTGAAAAGTTCTTCTACA 60.467 37.037 9.91 0.00 44.30 2.74
3613 4589 6.851330 CGTTTCCATGTGAAAAGTTCTTCTAC 59.149 38.462 9.91 0.00 44.30 2.59
3615 4591 5.821204 CGTTTCCATGTGAAAAGTTCTTCT 58.179 37.500 9.91 0.00 44.30 2.85
3636 4612 7.075741 GCATAACAAAAATCACAGAGTAACGT 58.924 34.615 0.00 0.00 0.00 3.99
3646 4622 7.224557 ACACTCAAAAGGCATAACAAAAATCAC 59.775 33.333 0.00 0.00 0.00 3.06
3647 4623 7.271511 ACACTCAAAAGGCATAACAAAAATCA 58.728 30.769 0.00 0.00 0.00 2.57
3648 4624 7.713764 ACACTCAAAAGGCATAACAAAAATC 57.286 32.000 0.00 0.00 0.00 2.17
3655 4632 4.209080 GCACAAACACTCAAAAGGCATAAC 59.791 41.667 0.00 0.00 0.00 1.89
3660 4637 2.292103 TGCACAAACACTCAAAAGGC 57.708 45.000 0.00 0.00 0.00 4.35
3704 4681 5.253330 TGAGAGAACCACTTTTGAACACTT 58.747 37.500 0.00 0.00 0.00 3.16
3705 4682 4.843728 TGAGAGAACCACTTTTGAACACT 58.156 39.130 0.00 0.00 0.00 3.55
3728 4706 6.053005 AGTTGTTTAGCTAGTTTGCACAGTA 58.947 36.000 0.00 0.00 34.99 2.74
3817 4835 6.644347 CACACTAGTAGGGATGTTCAAAGAT 58.356 40.000 6.38 0.00 0.00 2.40
3830 4848 4.481368 TTAACCCATGCACACTAGTAGG 57.519 45.455 1.45 0.00 0.00 3.18
3949 4977 5.538053 TGTCCACAATGGTCACAAATGTAAT 59.462 36.000 0.00 0.00 39.03 1.89
3959 4987 7.295322 TGATAAATTTTGTCCACAATGGTCA 57.705 32.000 0.00 0.00 39.03 4.02
3965 4993 9.906660 GTTAGACATGATAAATTTTGTCCACAA 57.093 29.630 14.31 6.55 39.39 3.33
4330 5358 2.260844 TGAAACTGGAGGAACAGCAG 57.739 50.000 0.00 0.00 42.21 4.24
4365 5393 8.874744 ATTATTGAATGGAAGACATATGAGGG 57.125 34.615 10.38 0.00 39.40 4.30
4400 5429 7.621991 CAACGGTTCTACAAATGATATCAGAC 58.378 38.462 11.78 0.42 0.00 3.51
4457 5492 0.035630 CCAAGCTCCACTTCTCCAGG 60.036 60.000 0.00 0.00 36.04 4.45
4748 5783 9.781834 CTTCCCCTTTTTCATTTTTGTTTTAAC 57.218 29.630 0.00 0.00 0.00 2.01
4754 5789 5.356751 GCAACTTCCCCTTTTTCATTTTTGT 59.643 36.000 0.00 0.00 0.00 2.83
4760 5795 3.711190 ACAAGCAACTTCCCCTTTTTCAT 59.289 39.130 0.00 0.00 0.00 2.57
4761 5796 3.103742 ACAAGCAACTTCCCCTTTTTCA 58.896 40.909 0.00 0.00 0.00 2.69
4826 5861 7.281999 GGATAGAATGTTTTCCTCTTCTTCTGG 59.718 40.741 0.00 0.00 31.84 3.86
4834 5869 5.422331 TGTCTCGGATAGAATGTTTTCCTCT 59.578 40.000 0.00 0.00 35.47 3.69
4876 5911 2.825532 AGGAGCTTCTTCAGAGTCAGAC 59.174 50.000 0.00 0.00 0.00 3.51
5110 6145 3.365220 GCGATTATAGCAGCCGTTAGAAG 59.635 47.826 0.00 0.00 34.19 2.85
5400 6435 6.806249 ACATATCAATGTAAAAACAAGGCACG 59.194 34.615 0.00 0.00 44.66 5.34
5422 6457 5.065988 GCAAACTATTACGGGATGAACACAT 59.934 40.000 0.00 0.00 0.00 3.21
5513 6548 9.821240 ACATATCCAGTCTTATCTCTTATCAGT 57.179 33.333 0.00 0.00 0.00 3.41
5525 6560 4.141711 GGGCTGACAACATATCCAGTCTTA 60.142 45.833 0.00 0.00 32.35 2.10
5703 6739 7.748241 GCACTCATTTCTTTCATCTTCTTGTAC 59.252 37.037 0.00 0.00 0.00 2.90
5796 6832 3.072330 TCACAATCCTCTTTGCCTGTACA 59.928 43.478 0.00 0.00 0.00 2.90
5938 6974 2.500504 ACCCCTAGTCGGAGTCAAATTC 59.499 50.000 0.21 0.00 33.16 2.17
5972 7018 5.816919 TCTTTTGAAACTCGGAACATTCAC 58.183 37.500 0.00 0.00 31.96 3.18
6038 7084 3.589988 ACTGTGGCTATTCAGTTTCTCG 58.410 45.455 0.00 0.00 41.33 4.04
6194 7244 4.657814 ATCTGGGACAAATACAACCTGT 57.342 40.909 0.00 0.00 38.70 4.00
6263 7313 6.214208 AGCCAGAATATTACCTGATATGCTGA 59.786 38.462 12.41 0.00 43.81 4.26
6676 7934 4.998671 TTTGGAGATGTTTGCAAAGTGA 57.001 36.364 13.26 0.00 34.14 3.41
6677 7935 5.107760 CGAATTTGGAGATGTTTGCAAAGTG 60.108 40.000 13.26 0.00 40.84 3.16
6678 7936 4.984161 CGAATTTGGAGATGTTTGCAAAGT 59.016 37.500 13.26 4.24 40.84 2.66
6679 7937 4.984161 ACGAATTTGGAGATGTTTGCAAAG 59.016 37.500 13.26 0.00 40.84 2.77
6680 7938 4.942852 ACGAATTTGGAGATGTTTGCAAA 58.057 34.783 8.05 8.05 41.56 3.68
6681 7939 4.582701 ACGAATTTGGAGATGTTTGCAA 57.417 36.364 0.00 0.00 0.00 4.08
6682 7940 4.545610 GAACGAATTTGGAGATGTTTGCA 58.454 39.130 0.00 0.00 0.00 4.08
6683 7941 3.920412 GGAACGAATTTGGAGATGTTTGC 59.080 43.478 0.00 0.00 0.00 3.68
6684 7942 5.376854 AGGAACGAATTTGGAGATGTTTG 57.623 39.130 0.00 0.00 0.00 2.93
6685 7943 4.459337 GGAGGAACGAATTTGGAGATGTTT 59.541 41.667 0.00 0.00 0.00 2.83
6686 7944 4.010349 GGAGGAACGAATTTGGAGATGTT 58.990 43.478 0.00 0.00 0.00 2.71
6687 7945 3.009033 TGGAGGAACGAATTTGGAGATGT 59.991 43.478 0.00 0.00 0.00 3.06
6688 7946 3.609853 TGGAGGAACGAATTTGGAGATG 58.390 45.455 0.00 0.00 0.00 2.90
6689 7947 3.264450 ACTGGAGGAACGAATTTGGAGAT 59.736 43.478 0.00 0.00 0.00 2.75
6690 7948 2.637872 ACTGGAGGAACGAATTTGGAGA 59.362 45.455 0.00 0.00 0.00 3.71
6691 7949 3.059352 ACTGGAGGAACGAATTTGGAG 57.941 47.619 0.00 0.00 0.00 3.86
6692 7950 4.019681 ACATACTGGAGGAACGAATTTGGA 60.020 41.667 0.00 0.00 0.00 3.53
6693 7951 4.094887 CACATACTGGAGGAACGAATTTGG 59.905 45.833 0.00 0.00 0.00 3.28
6694 7952 4.935205 TCACATACTGGAGGAACGAATTTG 59.065 41.667 0.00 0.00 0.00 2.32
6695 7953 5.160607 TCACATACTGGAGGAACGAATTT 57.839 39.130 0.00 0.00 0.00 1.82
6696 7954 4.819105 TCACATACTGGAGGAACGAATT 57.181 40.909 0.00 0.00 0.00 2.17
6697 7955 4.819105 TTCACATACTGGAGGAACGAAT 57.181 40.909 0.00 0.00 0.00 3.34
6698 7956 4.202274 TGTTTCACATACTGGAGGAACGAA 60.202 41.667 0.00 0.00 0.00 3.85
6699 7957 3.322541 TGTTTCACATACTGGAGGAACGA 59.677 43.478 0.00 0.00 0.00 3.85
6700 7958 3.659786 TGTTTCACATACTGGAGGAACG 58.340 45.455 0.00 0.00 0.00 3.95
6701 7959 6.575162 ATTTGTTTCACATACTGGAGGAAC 57.425 37.500 0.00 0.00 0.00 3.62
6702 7960 7.556275 GGATATTTGTTTCACATACTGGAGGAA 59.444 37.037 0.00 0.00 0.00 3.36
6703 7961 7.054124 GGATATTTGTTTCACATACTGGAGGA 58.946 38.462 0.00 0.00 0.00 3.71
6704 7962 6.828273 TGGATATTTGTTTCACATACTGGAGG 59.172 38.462 0.00 0.00 0.00 4.30
6705 7963 7.554118 AGTGGATATTTGTTTCACATACTGGAG 59.446 37.037 0.00 0.00 0.00 3.86
6706 7964 7.402054 AGTGGATATTTGTTTCACATACTGGA 58.598 34.615 0.00 0.00 0.00 3.86
6707 7965 7.630242 AGTGGATATTTGTTTCACATACTGG 57.370 36.000 0.00 0.00 0.00 4.00
6708 7966 8.514594 ACAAGTGGATATTTGTTTCACATACTG 58.485 33.333 0.00 0.00 33.54 2.74
6709 7967 8.635765 ACAAGTGGATATTTGTTTCACATACT 57.364 30.769 0.00 0.00 33.54 2.12
6710 7968 9.691362 AAACAAGTGGATATTTGTTTCACATAC 57.309 29.630 9.25 0.00 46.98 2.39
6722 7980 9.003658 GCACAGCTATATAAACAAGTGGATATT 57.996 33.333 0.00 0.00 0.00 1.28
6723 7981 7.607991 GGCACAGCTATATAAACAAGTGGATAT 59.392 37.037 0.00 0.00 0.00 1.63
6724 7982 6.934645 GGCACAGCTATATAAACAAGTGGATA 59.065 38.462 0.00 0.00 0.00 2.59
6725 7983 5.765182 GGCACAGCTATATAAACAAGTGGAT 59.235 40.000 0.00 0.00 0.00 3.41
6726 7984 5.104527 AGGCACAGCTATATAAACAAGTGGA 60.105 40.000 0.00 0.00 0.00 4.02
6727 7985 5.126067 AGGCACAGCTATATAAACAAGTGG 58.874 41.667 0.00 0.00 0.00 4.00
6763 8021 5.952947 ACTCTTATATTATGGACGGAGGGAG 59.047 44.000 0.00 0.00 0.00 4.30
6764 8022 5.715279 CACTCTTATATTATGGACGGAGGGA 59.285 44.000 0.00 0.00 0.00 4.20
6765 8023 5.480772 ACACTCTTATATTATGGACGGAGGG 59.519 44.000 0.00 0.00 0.00 4.30
6766 8024 6.591750 ACACTCTTATATTATGGACGGAGG 57.408 41.667 0.00 0.00 0.00 4.30
6767 8025 8.888579 AAAACACTCTTATATTATGGACGGAG 57.111 34.615 0.00 0.00 0.00 4.63
6797 8055 4.690122 AGCGTTTTTGACACTAGTGTAGT 58.310 39.130 27.98 6.32 45.05 2.73
6798 8056 4.982916 AGAGCGTTTTTGACACTAGTGTAG 59.017 41.667 27.98 13.76 45.05 2.74
6799 8057 4.940463 AGAGCGTTTTTGACACTAGTGTA 58.060 39.130 27.98 11.50 45.05 2.90
6801 8059 4.795970 AAGAGCGTTTTTGACACTAGTG 57.204 40.909 21.44 21.44 0.00 2.74
6802 8060 8.773404 AATATAAGAGCGTTTTTGACACTAGT 57.227 30.769 0.00 0.00 0.00 2.57
6805 8063 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
6806 8064 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
6807 8065 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
6808 8066 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
6809 8067 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
6810 8068 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
6811 8069 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
6812 8070 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
6813 8071 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
6814 8072 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
6815 8073 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
6816 8074 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
6817 8075 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
6818 8076 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
6819 8077 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
6820 8078 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
6821 8079 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
6822 8080 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
6823 8081 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
6824 8082 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
6825 8083 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
6826 8084 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
6827 8085 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
6828 8086 1.229131 TACTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
6829 8087 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
6830 8088 2.030371 CTTTACTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
6831 8089 3.010200 TCTTTACTACTCCCTCCGTCC 57.990 52.381 0.00 0.00 0.00 4.79
6832 8090 4.463070 AGATCTTTACTACTCCCTCCGTC 58.537 47.826 0.00 0.00 0.00 4.79
6833 8091 4.166531 AGAGATCTTTACTACTCCCTCCGT 59.833 45.833 0.00 0.00 0.00 4.69
6834 8092 4.721132 AGAGATCTTTACTACTCCCTCCG 58.279 47.826 0.00 0.00 0.00 4.63
6835 8093 5.074804 GGAGAGATCTTTACTACTCCCTCC 58.925 50.000 12.77 8.73 38.23 4.30
6839 8097 6.793505 TTTGGGAGAGATCTTTACTACTCC 57.206 41.667 14.68 14.68 41.90 3.85
6840 8098 7.708752 CACATTTGGGAGAGATCTTTACTACTC 59.291 40.741 0.00 0.00 0.00 2.59
6841 8099 7.181125 ACACATTTGGGAGAGATCTTTACTACT 59.819 37.037 0.00 0.00 0.00 2.57
6842 8100 7.278868 CACACATTTGGGAGAGATCTTTACTAC 59.721 40.741 0.00 0.00 0.00 2.73
6843 8101 7.331026 CACACATTTGGGAGAGATCTTTACTA 58.669 38.462 0.00 0.00 0.00 1.82
6844 8102 6.176183 CACACATTTGGGAGAGATCTTTACT 58.824 40.000 0.00 0.00 0.00 2.24
6861 8119 5.789643 AAACTATTTGGACAGCACACATT 57.210 34.783 0.00 0.00 0.00 2.71
6863 8121 4.215399 GCTAAACTATTTGGACAGCACACA 59.785 41.667 0.00 0.00 0.00 3.72
6864 8122 4.455877 AGCTAAACTATTTGGACAGCACAC 59.544 41.667 0.00 0.00 0.00 3.82
7336 8607 7.062722 CCAACAGATGAGTAATATAGCACATCG 59.937 40.741 0.00 0.00 39.00 3.84
7504 8784 4.418392 CCGCTTCTGATTTTCATTTCAGG 58.582 43.478 0.00 0.00 39.84 3.86
7622 8917 3.889538 ACGGAGCAGTGCATCTTATACTA 59.110 43.478 19.20 0.00 0.00 1.82
7668 8963 5.851177 ACGAAATGTCACGAAGCAATAAAAG 59.149 36.000 0.00 0.00 0.00 2.27
7672 8967 3.743911 ACACGAAATGTCACGAAGCAATA 59.256 39.130 0.00 0.00 36.54 1.90
7707 9002 3.941704 TGTGTAATGGGATGCATGGTA 57.058 42.857 2.46 0.00 0.00 3.25
7713 9008 6.282930 AGCAAAATAATGTGTAATGGGATGC 58.717 36.000 0.00 0.00 0.00 3.91
7714 9009 8.632679 AGTAGCAAAATAATGTGTAATGGGATG 58.367 33.333 0.00 0.00 0.00 3.51
7715 9010 8.632679 CAGTAGCAAAATAATGTGTAATGGGAT 58.367 33.333 0.00 0.00 0.00 3.85
7716 9011 7.613801 ACAGTAGCAAAATAATGTGTAATGGGA 59.386 33.333 0.00 0.00 33.07 4.37
7717 9012 7.701924 CACAGTAGCAAAATAATGTGTAATGGG 59.298 37.037 6.24 0.00 43.33 4.00
7718 9013 7.701924 CCACAGTAGCAAAATAATGTGTAATGG 59.298 37.037 11.80 0.00 45.57 3.16
7720 9015 8.574251 TCCACAGTAGCAAAATAATGTGTAAT 57.426 30.769 11.80 0.00 45.57 1.89
7721 9016 7.987750 TCCACAGTAGCAAAATAATGTGTAA 57.012 32.000 11.80 0.12 45.57 2.41
7766 9066 9.325150 ACGATGTAACGAATTAAAAATGTCAAG 57.675 29.630 0.00 0.00 37.03 3.02
7767 9067 9.108449 CACGATGTAACGAATTAAAAATGTCAA 57.892 29.630 0.00 0.00 37.03 3.18
7970 9270 5.447757 TGAATTATTCAGGGCATGATGACA 58.552 37.500 1.35 0.00 37.89 3.58
8107 9408 0.743701 CTCAGCACTCAGGTCCATGC 60.744 60.000 0.00 0.00 38.39 4.06
8269 9573 6.569780 ACACTTTTTGTTCAGTCATTTACCC 58.430 36.000 0.00 0.00 33.09 3.69
8358 9664 5.055642 TCTGCATTCTCATTTCAAAGCTG 57.944 39.130 0.00 0.00 0.00 4.24
8368 9674 3.726557 TCCCAACTTCTGCATTCTCAT 57.273 42.857 0.00 0.00 0.00 2.90
8385 9691 7.497579 ACTTTGGATGTAAACAAATGTTTTCCC 59.502 33.333 15.92 12.09 45.07 3.97
8386 9692 8.334632 CACTTTGGATGTAAACAAATGTTTTCC 58.665 33.333 15.92 16.07 45.07 3.13
8452 9758 4.001652 CTGCTATTGGACATGCTCTATGG 58.998 47.826 0.00 0.00 41.25 2.74
8475 9781 5.712446 CCACTGCTACTGCTCTATTATAGGA 59.288 44.000 0.00 0.00 40.48 2.94
8507 9821 4.688021 AGCTGCGTTTTTGGTTCAAAATA 58.312 34.783 6.64 0.00 41.89 1.40
8661 9975 5.722021 AAACAACTGTTTTCTTGTGGTCT 57.278 34.783 1.94 0.00 45.07 3.85
8694 10008 0.179124 GGAGCAACGTTTTTGGCACA 60.179 50.000 10.50 0.00 0.00 4.57
8712 10026 3.058914 GCCTATTATAGCGCAGTTGTTGG 60.059 47.826 11.47 5.31 0.00 3.77
8717 10031 2.550208 GGTGGCCTATTATAGCGCAGTT 60.550 50.000 11.47 0.00 0.00 3.16
8739 10053 7.122055 TCCAACAACAGCCCTAAAATACATTAG 59.878 37.037 0.00 0.00 33.54 1.73
8740 10054 6.948886 TCCAACAACAGCCCTAAAATACATTA 59.051 34.615 0.00 0.00 0.00 1.90
8741 10055 5.777732 TCCAACAACAGCCCTAAAATACATT 59.222 36.000 0.00 0.00 0.00 2.71
8742 10056 5.329399 TCCAACAACAGCCCTAAAATACAT 58.671 37.500 0.00 0.00 0.00 2.29
8743 10057 4.730966 TCCAACAACAGCCCTAAAATACA 58.269 39.130 0.00 0.00 0.00 2.29
8744 10058 5.007682 TCTCCAACAACAGCCCTAAAATAC 58.992 41.667 0.00 0.00 0.00 1.89
8745 10059 5.249780 TCTCCAACAACAGCCCTAAAATA 57.750 39.130 0.00 0.00 0.00 1.40
8746 10060 4.112634 TCTCCAACAACAGCCCTAAAAT 57.887 40.909 0.00 0.00 0.00 1.82
8747 10061 3.586470 TCTCCAACAACAGCCCTAAAA 57.414 42.857 0.00 0.00 0.00 1.52
8748 10062 3.806949 ATCTCCAACAACAGCCCTAAA 57.193 42.857 0.00 0.00 0.00 1.85
8749 10063 3.585289 TGTATCTCCAACAACAGCCCTAA 59.415 43.478 0.00 0.00 0.00 2.69
8750 10064 3.178046 TGTATCTCCAACAACAGCCCTA 58.822 45.455 0.00 0.00 0.00 3.53
8751 10065 1.985159 TGTATCTCCAACAACAGCCCT 59.015 47.619 0.00 0.00 0.00 5.19
8752 10066 2.489938 TGTATCTCCAACAACAGCCC 57.510 50.000 0.00 0.00 0.00 5.19
8753 10067 6.699575 AAATATGTATCTCCAACAACAGCC 57.300 37.500 0.00 0.00 0.00 4.85
8754 10068 6.907212 CGAAAATATGTATCTCCAACAACAGC 59.093 38.462 0.00 0.00 0.00 4.40
8755 10069 7.409697 CCGAAAATATGTATCTCCAACAACAG 58.590 38.462 0.00 0.00 0.00 3.16
8756 10070 6.317642 CCCGAAAATATGTATCTCCAACAACA 59.682 38.462 0.00 0.00 0.00 3.33
8757 10071 6.317893 ACCCGAAAATATGTATCTCCAACAAC 59.682 38.462 0.00 0.00 0.00 3.32
8758 10072 6.317642 CACCCGAAAATATGTATCTCCAACAA 59.682 38.462 0.00 0.00 0.00 2.83
8759 10073 5.820423 CACCCGAAAATATGTATCTCCAACA 59.180 40.000 0.00 0.00 0.00 3.33
8760 10074 5.277828 GCACCCGAAAATATGTATCTCCAAC 60.278 44.000 0.00 0.00 0.00 3.77
8761 10075 4.819630 GCACCCGAAAATATGTATCTCCAA 59.180 41.667 0.00 0.00 0.00 3.53
8762 10076 4.385825 GCACCCGAAAATATGTATCTCCA 58.614 43.478 0.00 0.00 0.00 3.86
8763 10077 3.751698 GGCACCCGAAAATATGTATCTCC 59.248 47.826 0.00 0.00 0.00 3.71
8764 10078 4.642429 AGGCACCCGAAAATATGTATCTC 58.358 43.478 0.00 0.00 0.00 2.75
8765 10079 4.706842 AGGCACCCGAAAATATGTATCT 57.293 40.909 0.00 0.00 0.00 1.98
8766 10080 6.870971 TTTAGGCACCCGAAAATATGTATC 57.129 37.500 0.00 0.00 0.00 2.24
8767 10081 7.648039 TTTTTAGGCACCCGAAAATATGTAT 57.352 32.000 3.68 0.00 37.78 2.29
8768 10082 7.648039 ATTTTTAGGCACCCGAAAATATGTA 57.352 32.000 8.17 0.00 37.78 2.29
8769 10083 5.986501 TTTTTAGGCACCCGAAAATATGT 57.013 34.783 3.68 0.00 37.78 2.29
8770 10084 8.934507 TTTATTTTTAGGCACCCGAAAATATG 57.065 30.769 13.93 0.00 37.78 1.78
8772 10086 9.589111 GATTTTATTTTTAGGCACCCGAAAATA 57.411 29.630 11.08 11.08 37.78 1.40
8773 10087 8.097662 TGATTTTATTTTTAGGCACCCGAAAAT 58.902 29.630 12.48 12.48 37.78 1.82
8774 10088 7.442656 TGATTTTATTTTTAGGCACCCGAAAA 58.557 30.769 0.00 0.00 36.59 2.29
8775 10089 6.994221 TGATTTTATTTTTAGGCACCCGAAA 58.006 32.000 0.00 0.00 0.00 3.46
8776 10090 6.591750 TGATTTTATTTTTAGGCACCCGAA 57.408 33.333 0.00 0.00 0.00 4.30
8777 10091 6.783708 ATGATTTTATTTTTAGGCACCCGA 57.216 33.333 0.00 0.00 0.00 5.14
8778 10092 7.841915 AAATGATTTTATTTTTAGGCACCCG 57.158 32.000 0.00 0.00 0.00 5.28
8801 10115 4.349501 CGTAAAACGTAAGGCACCAAAAA 58.650 39.130 0.00 0.00 46.39 1.94
8802 10116 3.791455 GCGTAAAACGTAAGGCACCAAAA 60.791 43.478 1.07 0.00 44.73 2.44
8803 10117 2.286891 GCGTAAAACGTAAGGCACCAAA 60.287 45.455 1.07 0.00 44.73 3.28
8804 10118 1.263752 GCGTAAAACGTAAGGCACCAA 59.736 47.619 1.07 0.00 44.73 3.67
8805 10119 0.867086 GCGTAAAACGTAAGGCACCA 59.133 50.000 1.07 0.00 44.73 4.17
8806 10120 0.166597 GGCGTAAAACGTAAGGCACC 59.833 55.000 10.88 0.00 44.73 5.01
8807 10121 0.867086 TGGCGTAAAACGTAAGGCAC 59.133 50.000 10.88 3.52 44.73 5.01
8808 10122 1.263752 GTTGGCGTAAAACGTAAGGCA 59.736 47.619 10.88 4.17 44.73 4.75
8809 10123 1.400113 GGTTGGCGTAAAACGTAAGGC 60.400 52.381 1.07 0.00 44.73 4.35
8810 10124 1.872313 TGGTTGGCGTAAAACGTAAGG 59.128 47.619 1.07 0.00 44.73 2.69
8811 10125 2.545106 AGTGGTTGGCGTAAAACGTAAG 59.455 45.455 1.07 0.00 44.73 2.34
8812 10126 2.543430 GAGTGGTTGGCGTAAAACGTAA 59.457 45.455 1.07 0.00 44.73 3.18
8813 10127 2.134346 GAGTGGTTGGCGTAAAACGTA 58.866 47.619 1.07 0.00 44.73 3.57
8814 10128 0.939419 GAGTGGTTGGCGTAAAACGT 59.061 50.000 1.07 0.00 44.73 3.99
8815 10129 1.223187 AGAGTGGTTGGCGTAAAACG 58.777 50.000 0.00 0.00 45.88 3.60
8816 10130 3.703286 AAAGAGTGGTTGGCGTAAAAC 57.297 42.857 0.00 0.00 0.00 2.43
8817 10131 3.444388 ACAAAAGAGTGGTTGGCGTAAAA 59.556 39.130 0.00 0.00 0.00 1.52
8818 10132 3.018149 ACAAAAGAGTGGTTGGCGTAAA 58.982 40.909 0.00 0.00 0.00 2.01
8819 10133 2.356382 CACAAAAGAGTGGTTGGCGTAA 59.644 45.455 0.00 0.00 35.88 3.18
8820 10134 1.944024 CACAAAAGAGTGGTTGGCGTA 59.056 47.619 0.00 0.00 35.88 4.42
8821 10135 0.738389 CACAAAAGAGTGGTTGGCGT 59.262 50.000 0.00 0.00 35.88 5.68
8822 10136 0.594796 GCACAAAAGAGTGGTTGGCG 60.595 55.000 0.00 0.00 39.87 5.69
8823 10137 0.249447 GGCACAAAAGAGTGGTTGGC 60.249 55.000 0.00 0.00 39.87 4.52
8824 10138 0.389025 GGGCACAAAAGAGTGGTTGG 59.611 55.000 0.00 0.00 39.87 3.77
8825 10139 1.402787 AGGGCACAAAAGAGTGGTTG 58.597 50.000 0.00 0.00 39.87 3.77
8826 10140 3.525800 ATAGGGCACAAAAGAGTGGTT 57.474 42.857 0.00 0.00 39.87 3.67
8827 10141 3.525800 AATAGGGCACAAAAGAGTGGT 57.474 42.857 0.00 0.00 39.87 4.16
8828 10142 5.765182 CCTATAATAGGGCACAAAAGAGTGG 59.235 44.000 0.00 0.00 42.42 4.00
8829 10143 6.867662 CCTATAATAGGGCACAAAAGAGTG 57.132 41.667 0.00 0.00 42.42 3.51
8842 10156 5.663106 TCTCCAATAGCAGCCCTATAATAGG 59.337 44.000 0.00 0.00 45.81 2.57
8843 10157 6.798427 TCTCCAATAGCAGCCCTATAATAG 57.202 41.667 0.00 0.00 35.70 1.73
8844 10158 8.068110 AGTATCTCCAATAGCAGCCCTATAATA 58.932 37.037 0.00 0.00 35.70 0.98
8845 10159 6.905776 AGTATCTCCAATAGCAGCCCTATAAT 59.094 38.462 0.00 0.00 35.70 1.28
8846 10160 6.264528 AGTATCTCCAATAGCAGCCCTATAA 58.735 40.000 0.00 0.00 35.70 0.98
8847 10161 5.843469 AGTATCTCCAATAGCAGCCCTATA 58.157 41.667 0.00 0.00 35.70 1.31
8848 10162 4.693420 AGTATCTCCAATAGCAGCCCTAT 58.307 43.478 0.00 0.00 38.40 2.57
8849 10163 4.090090 GAGTATCTCCAATAGCAGCCCTA 58.910 47.826 0.00 0.00 0.00 3.53
8850 10164 2.903135 GAGTATCTCCAATAGCAGCCCT 59.097 50.000 0.00 0.00 0.00 5.19
8851 10165 3.326836 GAGTATCTCCAATAGCAGCCC 57.673 52.381 0.00 0.00 0.00 5.19
8865 10179 8.561738 TGGAAAAATGGAACTGTTAGAGTATC 57.438 34.615 0.00 0.00 33.09 2.24
8868 10182 8.934023 TTATGGAAAAATGGAACTGTTAGAGT 57.066 30.769 0.00 0.00 35.94 3.24
8871 10185 9.981114 ACTTTTATGGAAAAATGGAACTGTTAG 57.019 29.630 0.00 0.00 34.16 2.34
8873 10187 9.679661 AAACTTTTATGGAAAAATGGAACTGTT 57.320 25.926 0.00 0.00 34.16 3.16
8874 10188 9.325198 GAAACTTTTATGGAAAAATGGAACTGT 57.675 29.630 0.00 0.00 34.16 3.55
8875 10189 9.546428 AGAAACTTTTATGGAAAAATGGAACTG 57.454 29.630 0.00 0.00 34.16 3.16
8876 10190 9.546428 CAGAAACTTTTATGGAAAAATGGAACT 57.454 29.630 0.00 0.00 34.16 3.01
8877 10191 9.541143 TCAGAAACTTTTATGGAAAAATGGAAC 57.459 29.630 0.00 0.00 34.16 3.62
8884 10198 9.762933 CTCCAAATCAGAAACTTTTATGGAAAA 57.237 29.630 0.00 0.00 34.31 2.29
8885 10199 8.367156 CCTCCAAATCAGAAACTTTTATGGAAA 58.633 33.333 0.00 0.00 34.31 3.13
8886 10200 7.039082 CCCTCCAAATCAGAAACTTTTATGGAA 60.039 37.037 0.00 0.00 34.31 3.53
8887 10201 6.437162 CCCTCCAAATCAGAAACTTTTATGGA 59.563 38.462 0.00 0.00 33.66 3.41
8888 10202 6.437162 TCCCTCCAAATCAGAAACTTTTATGG 59.563 38.462 0.00 0.00 30.74 2.74
8889 10203 7.177392 ACTCCCTCCAAATCAGAAACTTTTATG 59.823 37.037 0.00 0.00 0.00 1.90
8890 10204 7.241628 ACTCCCTCCAAATCAGAAACTTTTAT 58.758 34.615 0.00 0.00 0.00 1.40
8891 10205 6.610830 ACTCCCTCCAAATCAGAAACTTTTA 58.389 36.000 0.00 0.00 0.00 1.52
8892 10206 5.458595 ACTCCCTCCAAATCAGAAACTTTT 58.541 37.500 0.00 0.00 0.00 2.27
8893 10207 5.066913 ACTCCCTCCAAATCAGAAACTTT 57.933 39.130 0.00 0.00 0.00 2.66
8894 10208 4.731313 ACTCCCTCCAAATCAGAAACTT 57.269 40.909 0.00 0.00 0.00 2.66
8895 10209 4.104738 TCAACTCCCTCCAAATCAGAAACT 59.895 41.667 0.00 0.00 0.00 2.66
8896 10210 4.398319 TCAACTCCCTCCAAATCAGAAAC 58.602 43.478 0.00 0.00 0.00 2.78
8897 10211 4.655963 CTCAACTCCCTCCAAATCAGAAA 58.344 43.478 0.00 0.00 0.00 2.52
8898 10212 3.560025 GCTCAACTCCCTCCAAATCAGAA 60.560 47.826 0.00 0.00 0.00 3.02
8899 10213 2.026822 GCTCAACTCCCTCCAAATCAGA 60.027 50.000 0.00 0.00 0.00 3.27
8900 10214 2.290514 TGCTCAACTCCCTCCAAATCAG 60.291 50.000 0.00 0.00 0.00 2.90
8901 10215 1.704628 TGCTCAACTCCCTCCAAATCA 59.295 47.619 0.00 0.00 0.00 2.57
8902 10216 2.496899 TGCTCAACTCCCTCCAAATC 57.503 50.000 0.00 0.00 0.00 2.17
8903 10217 2.978156 TTGCTCAACTCCCTCCAAAT 57.022 45.000 0.00 0.00 0.00 2.32
8904 10218 2.746279 TTTGCTCAACTCCCTCCAAA 57.254 45.000 0.00 0.00 0.00 3.28
8905 10219 2.746279 TTTTGCTCAACTCCCTCCAA 57.254 45.000 0.00 0.00 0.00 3.53
8906 10220 2.746279 TTTTTGCTCAACTCCCTCCA 57.254 45.000 0.00 0.00 0.00 3.86
8931 10245 9.678247 CCACTAAAAATTCACGTTTACAAAAAC 57.322 29.630 0.00 0.00 41.36 2.43
8932 10246 8.381387 GCCACTAAAAATTCACGTTTACAAAAA 58.619 29.630 0.00 0.00 0.00 1.94
8933 10247 7.010275 GGCCACTAAAAATTCACGTTTACAAAA 59.990 33.333 0.00 0.00 0.00 2.44
8934 10248 6.476053 GGCCACTAAAAATTCACGTTTACAAA 59.524 34.615 0.00 0.00 0.00 2.83
8935 10249 5.978322 GGCCACTAAAAATTCACGTTTACAA 59.022 36.000 0.00 0.00 0.00 2.41
8936 10250 5.299782 AGGCCACTAAAAATTCACGTTTACA 59.700 36.000 5.01 0.00 0.00 2.41
8937 10251 5.765176 AGGCCACTAAAAATTCACGTTTAC 58.235 37.500 5.01 0.00 0.00 2.01
8938 10252 6.394025 AAGGCCACTAAAAATTCACGTTTA 57.606 33.333 5.01 0.00 0.00 2.01
8939 10253 4.929819 AGGCCACTAAAAATTCACGTTT 57.070 36.364 5.01 0.00 0.00 3.60
8940 10254 4.929819 AAGGCCACTAAAAATTCACGTT 57.070 36.364 5.01 0.00 0.00 3.99
8941 10255 4.929819 AAAGGCCACTAAAAATTCACGT 57.070 36.364 5.01 0.00 0.00 4.49
8942 10256 7.758495 ACTATAAAGGCCACTAAAAATTCACG 58.242 34.615 5.01 0.00 0.00 4.35
8945 10259 9.731819 GCTAACTATAAAGGCCACTAAAAATTC 57.268 33.333 5.01 0.00 0.00 2.17
8946 10260 8.692710 GGCTAACTATAAAGGCCACTAAAAATT 58.307 33.333 5.01 0.00 42.08 1.82
8947 10261 8.234136 GGCTAACTATAAAGGCCACTAAAAAT 57.766 34.615 5.01 0.00 42.08 1.82
8948 10262 7.634671 GGCTAACTATAAAGGCCACTAAAAA 57.365 36.000 5.01 0.00 42.08 1.94
8966 10280 1.608154 GAGGGGGAGTTGGGCTAAC 59.392 63.158 5.49 5.49 39.65 2.34
8967 10281 1.618447 GGAGGGGGAGTTGGGCTAA 60.618 63.158 0.00 0.00 0.00 3.09
8968 10282 2.042261 GGAGGGGGAGTTGGGCTA 59.958 66.667 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.