Multiple sequence alignment - TraesCS5D01G398800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G398800 chr5D 100.000 5514 0 0 1 5514 464702262 464696749 0.000000e+00 10183
1 TraesCS5D01G398800 chr5D 78.920 3425 666 50 1078 4474 555635854 555639250 0.000000e+00 2274
2 TraesCS5D01G398800 chr5D 77.480 3428 721 42 1070 4469 555501367 555504771 0.000000e+00 2006
3 TraesCS5D01G398800 chr5D 77.930 2696 544 43 1292 3964 555356808 555359475 0.000000e+00 1635
4 TraesCS5D01G398800 chr5D 76.627 2182 480 27 1077 3245 555046074 555048238 0.000000e+00 1177
5 TraesCS5D01G398800 chr5D 78.870 407 61 13 5087 5491 351047067 351047450 9.170000e-63 252
6 TraesCS5D01G398800 chr5A 92.653 4274 234 29 419 4622 585202599 585198336 0.000000e+00 6080
7 TraesCS5D01G398800 chr5A 93.565 575 32 2 4930 5504 585169939 585169370 0.000000e+00 852
8 TraesCS5D01G398800 chr5A 93.182 308 16 2 4628 4934 585198363 585198060 1.090000e-121 448
9 TraesCS5D01G398800 chr5B 94.531 3840 157 20 811 4612 571605820 571609644 0.000000e+00 5879
10 TraesCS5D01G398800 chr5B 78.256 3371 688 27 1125 4474 695493824 695490478 0.000000e+00 2122
11 TraesCS5D01G398800 chr5B 78.915 1935 381 20 2551 4474 695875784 695873866 0.000000e+00 1288
12 TraesCS5D01G398800 chr5B 92.265 362 26 2 6 366 617174396 617174756 3.810000e-141 512
13 TraesCS5D01G398800 chr5B 83.983 462 36 12 4629 5079 571609631 571610065 5.140000e-110 409
14 TraesCS5D01G398800 chr5B 93.000 200 11 1 581 780 571605627 571605823 6.990000e-74 289
15 TraesCS5D01G398800 chr5B 74.501 451 83 18 5077 5504 322197191 322197632 3.420000e-37 167
16 TraesCS5D01G398800 chr5B 88.298 94 9 2 419 512 571597665 571597756 1.620000e-20 111
17 TraesCS5D01G398800 chr3A 78.902 3389 674 31 1154 4525 44605568 44608932 0.000000e+00 2259
18 TraesCS5D01G398800 chr1B 77.753 3115 650 38 1403 4494 433644477 433641383 0.000000e+00 1873
19 TraesCS5D01G398800 chr1B 90.323 372 32 2 1 368 409700182 409700553 8.300000e-133 484
20 TraesCS5D01G398800 chr1D 76.997 2591 529 47 1757 4310 320730837 320728277 0.000000e+00 1421
21 TraesCS5D01G398800 chr1D 92.287 363 27 1 1 362 329506816 329506454 1.060000e-141 514
22 TraesCS5D01G398800 chr1A 80.268 1419 269 9 3065 4475 402229736 402231151 0.000000e+00 1059
23 TraesCS5D01G398800 chr7D 73.147 2860 706 52 1186 4014 18695130 18692302 0.000000e+00 970
24 TraesCS5D01G398800 chr7D 83.525 261 29 3 5238 5498 206429518 206429272 1.190000e-56 231
25 TraesCS5D01G398800 chr2B 92.761 373 26 1 1 372 593662788 593663160 6.290000e-149 538
26 TraesCS5D01G398800 chr2B 75.645 349 73 10 4128 4470 779880325 779879983 4.420000e-36 163
27 TraesCS5D01G398800 chr4B 92.308 377 25 4 1 376 666620291 666619918 2.920000e-147 532
28 TraesCS5D01G398800 chr4D 92.225 373 28 1 1 372 497937809 497938181 1.360000e-145 527
29 TraesCS5D01G398800 chr4D 86.765 204 17 4 5175 5378 6417669 6417476 9.300000e-53 219
30 TraesCS5D01G398800 chr3D 92.225 373 26 3 1 372 527669716 527669346 4.890000e-145 525
31 TraesCS5D01G398800 chr6D 92.308 364 24 2 6 368 455635786 455636146 1.060000e-141 514
32 TraesCS5D01G398800 chr6D 78.237 363 58 13 5135 5485 69293692 69294045 4.330000e-51 213
33 TraesCS5D01G398800 chr6B 91.389 360 28 3 1 359 679677328 679677685 1.780000e-134 490
34 TraesCS5D01G398800 chr6B 78.036 387 65 12 5125 5498 102385350 102385729 5.560000e-55 226
35 TraesCS5D01G398800 chr6A 78.608 388 63 7 5127 5498 53886454 53886071 7.140000e-59 239
36 TraesCS5D01G398800 chr3B 81.092 238 33 10 5131 5357 592865070 592865306 4.390000e-41 180
37 TraesCS5D01G398800 chr4A 73.256 516 126 11 1187 1696 714099831 714100340 1.580000e-40 178
38 TraesCS5D01G398800 chr2A 75.953 341 69 11 1187 1522 762741737 762741405 4.420000e-36 163
39 TraesCS5D01G398800 chr2A 77.542 236 53 0 1191 1426 715782626 715782391 5.760000e-30 143
40 TraesCS5D01G398800 chr2D 75.072 349 75 10 4128 4470 650880512 650880170 9.570000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G398800 chr5D 464696749 464702262 5513 True 10183.000000 10183 100.000000 1 5514 1 chr5D.!!$R1 5513
1 TraesCS5D01G398800 chr5D 555635854 555639250 3396 False 2274.000000 2274 78.920000 1078 4474 1 chr5D.!!$F5 3396
2 TraesCS5D01G398800 chr5D 555501367 555504771 3404 False 2006.000000 2006 77.480000 1070 4469 1 chr5D.!!$F4 3399
3 TraesCS5D01G398800 chr5D 555356808 555359475 2667 False 1635.000000 1635 77.930000 1292 3964 1 chr5D.!!$F3 2672
4 TraesCS5D01G398800 chr5D 555046074 555048238 2164 False 1177.000000 1177 76.627000 1077 3245 1 chr5D.!!$F2 2168
5 TraesCS5D01G398800 chr5A 585198060 585202599 4539 True 3264.000000 6080 92.917500 419 4934 2 chr5A.!!$R2 4515
6 TraesCS5D01G398800 chr5A 585169370 585169939 569 True 852.000000 852 93.565000 4930 5504 1 chr5A.!!$R1 574
7 TraesCS5D01G398800 chr5B 571605627 571610065 4438 False 2192.333333 5879 90.504667 581 5079 3 chr5B.!!$F4 4498
8 TraesCS5D01G398800 chr5B 695490478 695493824 3346 True 2122.000000 2122 78.256000 1125 4474 1 chr5B.!!$R1 3349
9 TraesCS5D01G398800 chr5B 695873866 695875784 1918 True 1288.000000 1288 78.915000 2551 4474 1 chr5B.!!$R2 1923
10 TraesCS5D01G398800 chr3A 44605568 44608932 3364 False 2259.000000 2259 78.902000 1154 4525 1 chr3A.!!$F1 3371
11 TraesCS5D01G398800 chr1B 433641383 433644477 3094 True 1873.000000 1873 77.753000 1403 4494 1 chr1B.!!$R1 3091
12 TraesCS5D01G398800 chr1D 320728277 320730837 2560 True 1421.000000 1421 76.997000 1757 4310 1 chr1D.!!$R1 2553
13 TraesCS5D01G398800 chr1A 402229736 402231151 1415 False 1059.000000 1059 80.268000 3065 4475 1 chr1A.!!$F1 1410
14 TraesCS5D01G398800 chr7D 18692302 18695130 2828 True 970.000000 970 73.147000 1186 4014 1 chr7D.!!$R1 2828

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
108 109 0.030501 ATCCCCAACCATAGGACCGA 60.031 55.000 0.00 0.00 30.97 4.69 F
109 110 0.030501 TCCCCAACCATAGGACCGAT 60.031 55.000 0.00 0.00 0.00 4.18 F
315 316 0.034670 GGTGCTGAAAGATGGCCTCT 60.035 55.000 3.32 0.95 34.07 3.69 F
998 1053 0.182061 CATAGGTCATGGCTGCCTGT 59.818 55.000 21.03 5.74 33.03 4.00 F
1006 1061 0.682209 ATGGCTGCCTGTGATGGAAC 60.682 55.000 21.03 0.00 0.00 3.62 F
1059 1114 0.694444 ACACCTCCACACTCCCAGTT 60.694 55.000 0.00 0.00 0.00 3.16 F
1457 1544 1.003118 CTCCATTCCACCCGAACTTGA 59.997 52.381 0.00 0.00 31.79 3.02 F
1819 1909 2.352805 GCCTAGTGCCACAAGCCT 59.647 61.111 0.00 0.00 42.71 4.58 F
2711 2813 3.242739 CCAACACAAATAGGTATGCTCGC 60.243 47.826 0.00 0.00 0.00 5.03 F
3420 3546 0.541863 AGAAGGAGGGGTACAATGCG 59.458 55.000 0.00 0.00 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1395 1482 0.246910 GGTTGAGGACGGAGAGGAAC 59.753 60.000 0.00 0.0 0.00 3.62 R
2027 2118 1.506262 GCTAACCATGTTGGCACGG 59.494 57.895 9.97 0.0 42.67 4.94 R
2296 2388 3.307691 CCTTGGCCAGACAACTGATTAGA 60.308 47.826 5.11 0.0 46.03 2.10 R
2521 2616 6.039382 GGAAGGCCACCTGTTAACTTATTATG 59.961 42.308 5.01 0.0 32.13 1.90 R
2711 2813 6.898041 TGGAGAAATAAATGTTGAACACTCG 58.102 36.000 0.00 0.0 0.00 4.18 R
3176 3296 1.141053 CGGGTATTTGGCCTTCTAGCT 59.859 52.381 3.32 0.0 0.00 3.32 R
3297 3420 4.161754 GGTAAGTGTATAGCAGTTGAGGGT 59.838 45.833 0.00 0.0 40.66 4.34 R
3410 3536 5.554822 TGGATTTAAAGACGCATTGTACC 57.445 39.130 0.00 0.0 0.00 3.34 R
4126 4289 0.606604 TTCCGTACTCTGCCCAAGAC 59.393 55.000 0.00 0.0 0.00 3.01 R
5424 5608 0.034059 CCTACATCGACCTCATGGGC 59.966 60.000 0.00 0.0 39.10 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.394712 CCGAGGGCACAGGTCCAC 62.395 72.222 0.00 0.00 43.06 4.02
31 32 4.394712 CGAGGGCACAGGTCCACC 62.395 72.222 0.00 0.00 43.06 4.61
32 33 3.249189 GAGGGCACAGGTCCACCA 61.249 66.667 0.00 0.00 43.06 4.17
33 34 3.553095 GAGGGCACAGGTCCACCAC 62.553 68.421 0.00 0.00 43.06 4.16
35 36 3.936203 GGCACAGGTCCACCACGA 61.936 66.667 0.00 0.00 38.89 4.35
36 37 2.357517 GCACAGGTCCACCACGAG 60.358 66.667 0.00 0.00 38.89 4.18
37 38 2.343758 CACAGGTCCACCACGAGG 59.656 66.667 0.00 0.00 38.89 4.63
38 39 2.200370 ACAGGTCCACCACGAGGA 59.800 61.111 5.68 0.00 38.89 3.71
39 40 1.229209 ACAGGTCCACCACGAGGAT 60.229 57.895 5.68 0.00 37.52 3.24
40 41 1.219124 CAGGTCCACCACGAGGATG 59.781 63.158 5.68 0.11 37.52 3.51
41 42 1.229209 AGGTCCACCACGAGGATGT 60.229 57.895 5.68 0.00 37.52 3.06
42 43 1.218316 GGTCCACCACGAGGATGTC 59.782 63.158 5.68 0.00 37.52 3.06
63 64 4.849310 GCCGCCACGCCATCCTTA 62.849 66.667 0.00 0.00 0.00 2.69
64 65 2.895372 CCGCCACGCCATCCTTAC 60.895 66.667 0.00 0.00 0.00 2.34
65 66 2.186903 CGCCACGCCATCCTTACT 59.813 61.111 0.00 0.00 0.00 2.24
66 67 1.449601 CGCCACGCCATCCTTACTT 60.450 57.895 0.00 0.00 0.00 2.24
67 68 1.705337 CGCCACGCCATCCTTACTTG 61.705 60.000 0.00 0.00 0.00 3.16
68 69 0.392461 GCCACGCCATCCTTACTTGA 60.392 55.000 0.00 0.00 0.00 3.02
69 70 1.948611 GCCACGCCATCCTTACTTGAA 60.949 52.381 0.00 0.00 0.00 2.69
70 71 1.737793 CCACGCCATCCTTACTTGAAC 59.262 52.381 0.00 0.00 0.00 3.18
71 72 2.422597 CACGCCATCCTTACTTGAACA 58.577 47.619 0.00 0.00 0.00 3.18
72 73 2.416547 CACGCCATCCTTACTTGAACAG 59.583 50.000 0.00 0.00 0.00 3.16
73 74 2.301870 ACGCCATCCTTACTTGAACAGA 59.698 45.455 0.00 0.00 0.00 3.41
74 75 2.673368 CGCCATCCTTACTTGAACAGAC 59.327 50.000 0.00 0.00 0.00 3.51
75 76 3.617531 CGCCATCCTTACTTGAACAGACT 60.618 47.826 0.00 0.00 0.00 3.24
76 77 3.686726 GCCATCCTTACTTGAACAGACTG 59.313 47.826 0.00 0.00 0.00 3.51
77 78 4.256920 CCATCCTTACTTGAACAGACTGG 58.743 47.826 7.51 0.00 0.00 4.00
78 79 4.263068 CCATCCTTACTTGAACAGACTGGT 60.263 45.833 7.51 0.00 0.00 4.00
79 80 5.308825 CATCCTTACTTGAACAGACTGGTT 58.691 41.667 7.51 0.00 0.00 3.67
80 81 5.367945 TCCTTACTTGAACAGACTGGTTT 57.632 39.130 7.51 0.00 0.00 3.27
81 82 5.365619 TCCTTACTTGAACAGACTGGTTTC 58.634 41.667 7.51 3.24 0.00 2.78
82 83 4.515567 CCTTACTTGAACAGACTGGTTTCC 59.484 45.833 7.51 0.00 0.00 3.13
83 84 3.644966 ACTTGAACAGACTGGTTTCCA 57.355 42.857 7.51 0.00 0.00 3.53
84 85 3.963129 ACTTGAACAGACTGGTTTCCAA 58.037 40.909 7.51 0.18 30.80 3.53
85 86 4.340617 ACTTGAACAGACTGGTTTCCAAA 58.659 39.130 7.51 0.00 30.80 3.28
86 87 4.956075 ACTTGAACAGACTGGTTTCCAAAT 59.044 37.500 7.51 0.00 30.80 2.32
87 88 5.067805 ACTTGAACAGACTGGTTTCCAAATC 59.932 40.000 7.51 0.00 30.80 2.17
88 89 3.888930 TGAACAGACTGGTTTCCAAATCC 59.111 43.478 7.51 0.00 30.80 3.01
89 90 3.593442 ACAGACTGGTTTCCAAATCCA 57.407 42.857 7.51 0.00 30.80 3.41
90 91 4.118168 ACAGACTGGTTTCCAAATCCAT 57.882 40.909 7.51 0.00 30.80 3.41
91 92 4.082125 ACAGACTGGTTTCCAAATCCATC 58.918 43.478 7.51 0.00 30.80 3.51
92 93 3.445096 CAGACTGGTTTCCAAATCCATCC 59.555 47.826 0.00 0.00 30.80 3.51
93 94 2.760650 GACTGGTTTCCAAATCCATCCC 59.239 50.000 0.00 0.00 30.80 3.85
94 95 2.110578 CTGGTTTCCAAATCCATCCCC 58.889 52.381 0.00 0.00 30.80 4.81
95 96 1.434773 TGGTTTCCAAATCCATCCCCA 59.565 47.619 0.00 0.00 0.00 4.96
96 97 2.158097 TGGTTTCCAAATCCATCCCCAA 60.158 45.455 0.00 0.00 0.00 4.12
97 98 2.236146 GGTTTCCAAATCCATCCCCAAC 59.764 50.000 0.00 0.00 0.00 3.77
98 99 2.236146 GTTTCCAAATCCATCCCCAACC 59.764 50.000 0.00 0.00 0.00 3.77
99 100 1.088269 TCCAAATCCATCCCCAACCA 58.912 50.000 0.00 0.00 0.00 3.67
100 101 1.650700 TCCAAATCCATCCCCAACCAT 59.349 47.619 0.00 0.00 0.00 3.55
101 102 2.861957 TCCAAATCCATCCCCAACCATA 59.138 45.455 0.00 0.00 0.00 2.74
102 103 3.117169 TCCAAATCCATCCCCAACCATAG 60.117 47.826 0.00 0.00 0.00 2.23
103 104 3.233507 CAAATCCATCCCCAACCATAGG 58.766 50.000 0.00 0.00 0.00 2.57
104 105 2.531177 ATCCATCCCCAACCATAGGA 57.469 50.000 0.00 0.00 0.00 2.94
105 106 1.518367 TCCATCCCCAACCATAGGAC 58.482 55.000 0.00 0.00 30.97 3.85
106 107 0.478507 CCATCCCCAACCATAGGACC 59.521 60.000 0.00 0.00 30.97 4.46
107 108 0.108585 CATCCCCAACCATAGGACCG 59.891 60.000 0.00 0.00 30.97 4.79
108 109 0.030501 ATCCCCAACCATAGGACCGA 60.031 55.000 0.00 0.00 30.97 4.69
109 110 0.030501 TCCCCAACCATAGGACCGAT 60.031 55.000 0.00 0.00 0.00 4.18
110 111 0.108585 CCCCAACCATAGGACCGATG 59.891 60.000 7.58 7.58 0.00 3.84
112 113 0.535102 CCAACCATAGGACCGATGGC 60.535 60.000 28.23 0.00 46.76 4.40
113 114 0.535102 CAACCATAGGACCGATGGCC 60.535 60.000 28.23 0.00 46.76 5.36
114 115 0.694444 AACCATAGGACCGATGGCCT 60.694 55.000 28.23 16.00 46.76 5.19
115 116 1.122019 ACCATAGGACCGATGGCCTC 61.122 60.000 28.23 0.00 46.76 4.70
117 118 1.152525 ATAGGACCGATGGCCTCGT 60.153 57.895 18.94 6.61 46.18 4.18
118 119 1.179814 ATAGGACCGATGGCCTCGTC 61.180 60.000 18.94 15.85 46.18 4.20
119 120 2.561467 TAGGACCGATGGCCTCGTCA 62.561 60.000 18.94 0.00 46.18 4.35
120 121 2.105128 GACCGATGGCCTCGTCAG 59.895 66.667 18.94 9.61 46.18 3.51
121 122 3.432051 GACCGATGGCCTCGTCAGG 62.432 68.421 18.94 14.24 46.18 3.86
122 123 4.227134 CCGATGGCCTCGTCAGGG 62.227 72.222 18.94 4.17 46.18 4.45
123 124 3.147595 CGATGGCCTCGTCAGGGA 61.148 66.667 3.32 0.00 42.56 4.20
124 125 2.721167 CGATGGCCTCGTCAGGGAA 61.721 63.158 3.32 0.00 42.56 3.97
125 126 1.144936 GATGGCCTCGTCAGGGAAG 59.855 63.158 3.32 0.00 40.75 3.46
126 127 2.317149 GATGGCCTCGTCAGGGAAGG 62.317 65.000 3.32 0.00 40.75 3.46
127 128 2.683933 GGCCTCGTCAGGGAAGGA 60.684 66.667 0.00 0.00 40.75 3.36
128 129 2.066999 GGCCTCGTCAGGGAAGGAT 61.067 63.158 0.00 0.00 40.75 3.24
129 130 1.443828 GCCTCGTCAGGGAAGGATC 59.556 63.158 0.00 0.00 40.75 3.36
130 131 2.034048 GCCTCGTCAGGGAAGGATCC 62.034 65.000 2.48 2.48 45.77 3.36
146 147 7.996385 GGAAGGATCCGAAAAATCTTTATTCA 58.004 34.615 5.98 0.00 35.59 2.57
147 148 8.466798 GGAAGGATCCGAAAAATCTTTATTCAA 58.533 33.333 5.98 0.00 35.59 2.69
148 149 9.290483 GAAGGATCCGAAAAATCTTTATTCAAC 57.710 33.333 5.98 0.00 0.00 3.18
149 150 8.348285 AGGATCCGAAAAATCTTTATTCAACA 57.652 30.769 5.98 0.00 0.00 3.33
150 151 8.244113 AGGATCCGAAAAATCTTTATTCAACAC 58.756 33.333 5.98 0.00 0.00 3.32
151 152 7.488150 GGATCCGAAAAATCTTTATTCAACACC 59.512 37.037 0.00 0.00 0.00 4.16
152 153 6.375377 TCCGAAAAATCTTTATTCAACACCG 58.625 36.000 0.00 0.00 0.00 4.94
153 154 6.016943 TCCGAAAAATCTTTATTCAACACCGT 60.017 34.615 0.00 0.00 0.00 4.83
154 155 6.304683 CCGAAAAATCTTTATTCAACACCGTC 59.695 38.462 0.00 0.00 0.00 4.79
155 156 6.853872 CGAAAAATCTTTATTCAACACCGTCA 59.146 34.615 0.00 0.00 0.00 4.35
156 157 7.537306 CGAAAAATCTTTATTCAACACCGTCAT 59.463 33.333 0.00 0.00 0.00 3.06
157 158 8.742554 AAAAATCTTTATTCAACACCGTCATC 57.257 30.769 0.00 0.00 0.00 2.92
158 159 7.447374 AAATCTTTATTCAACACCGTCATCA 57.553 32.000 0.00 0.00 0.00 3.07
159 160 7.630242 AATCTTTATTCAACACCGTCATCAT 57.370 32.000 0.00 0.00 0.00 2.45
160 161 6.662414 TCTTTATTCAACACCGTCATCATC 57.338 37.500 0.00 0.00 0.00 2.92
161 162 5.290885 TCTTTATTCAACACCGTCATCATCG 59.709 40.000 0.00 0.00 0.00 3.84
162 163 1.075542 TTCAACACCGTCATCATCGC 58.924 50.000 0.00 0.00 0.00 4.58
163 164 0.739462 TCAACACCGTCATCATCGCC 60.739 55.000 0.00 0.00 0.00 5.54
164 165 1.809619 AACACCGTCATCATCGCCG 60.810 57.895 0.00 0.00 0.00 6.46
165 166 3.630148 CACCGTCATCATCGCCGC 61.630 66.667 0.00 0.00 0.00 6.53
166 167 4.891727 ACCGTCATCATCGCCGCC 62.892 66.667 0.00 0.00 0.00 6.13
181 182 2.998667 GCCGAAGCGAAGACGATG 59.001 61.111 0.00 0.00 42.66 3.84
182 183 1.516386 GCCGAAGCGAAGACGATGA 60.516 57.895 0.00 0.00 42.66 2.92
183 184 1.076533 GCCGAAGCGAAGACGATGAA 61.077 55.000 0.00 0.00 42.66 2.57
184 185 0.640768 CCGAAGCGAAGACGATGAAC 59.359 55.000 0.00 0.00 42.66 3.18
185 186 1.336877 CGAAGCGAAGACGATGAACA 58.663 50.000 0.00 0.00 42.66 3.18
186 187 1.318785 CGAAGCGAAGACGATGAACAG 59.681 52.381 0.00 0.00 42.66 3.16
187 188 1.059835 GAAGCGAAGACGATGAACAGC 59.940 52.381 0.00 0.00 42.66 4.40
188 189 0.737715 AGCGAAGACGATGAACAGCC 60.738 55.000 0.00 0.00 42.66 4.85
189 190 0.737715 GCGAAGACGATGAACAGCCT 60.738 55.000 0.00 0.00 42.66 4.58
190 191 1.469251 GCGAAGACGATGAACAGCCTA 60.469 52.381 0.00 0.00 42.66 3.93
191 192 2.876091 CGAAGACGATGAACAGCCTAA 58.124 47.619 0.00 0.00 42.66 2.69
192 193 3.250744 CGAAGACGATGAACAGCCTAAA 58.749 45.455 0.00 0.00 42.66 1.85
193 194 3.678072 CGAAGACGATGAACAGCCTAAAA 59.322 43.478 0.00 0.00 42.66 1.52
194 195 4.151689 CGAAGACGATGAACAGCCTAAAAA 59.848 41.667 0.00 0.00 42.66 1.94
195 196 5.358298 AAGACGATGAACAGCCTAAAAAC 57.642 39.130 0.00 0.00 0.00 2.43
196 197 3.751698 AGACGATGAACAGCCTAAAAACC 59.248 43.478 0.00 0.00 0.00 3.27
197 198 3.751518 ACGATGAACAGCCTAAAAACCT 58.248 40.909 0.00 0.00 0.00 3.50
198 199 3.502211 ACGATGAACAGCCTAAAAACCTG 59.498 43.478 0.00 0.00 0.00 4.00
199 200 3.751175 CGATGAACAGCCTAAAAACCTGA 59.249 43.478 0.00 0.00 0.00 3.86
200 201 4.378459 CGATGAACAGCCTAAAAACCTGAC 60.378 45.833 0.00 0.00 0.00 3.51
201 202 4.164843 TGAACAGCCTAAAAACCTGACT 57.835 40.909 0.00 0.00 0.00 3.41
202 203 5.298989 TGAACAGCCTAAAAACCTGACTA 57.701 39.130 0.00 0.00 0.00 2.59
203 204 5.061179 TGAACAGCCTAAAAACCTGACTAC 58.939 41.667 0.00 0.00 0.00 2.73
204 205 4.699925 ACAGCCTAAAAACCTGACTACA 57.300 40.909 0.00 0.00 0.00 2.74
205 206 4.386711 ACAGCCTAAAAACCTGACTACAC 58.613 43.478 0.00 0.00 0.00 2.90
206 207 4.141574 ACAGCCTAAAAACCTGACTACACA 60.142 41.667 0.00 0.00 0.00 3.72
207 208 4.452455 CAGCCTAAAAACCTGACTACACAG 59.548 45.833 0.00 0.00 37.61 3.66
208 209 4.347000 AGCCTAAAAACCTGACTACACAGA 59.653 41.667 0.00 0.00 39.94 3.41
209 210 5.061179 GCCTAAAAACCTGACTACACAGAA 58.939 41.667 0.00 0.00 39.94 3.02
210 211 5.179555 GCCTAAAAACCTGACTACACAGAAG 59.820 44.000 0.00 0.00 39.94 2.85
211 212 6.289064 CCTAAAAACCTGACTACACAGAAGT 58.711 40.000 0.00 0.00 39.94 3.01
212 213 7.439381 CCTAAAAACCTGACTACACAGAAGTA 58.561 38.462 0.00 0.00 39.94 2.24
213 214 7.929785 CCTAAAAACCTGACTACACAGAAGTAA 59.070 37.037 0.00 0.00 39.94 2.24
214 215 9.321562 CTAAAAACCTGACTACACAGAAGTAAA 57.678 33.333 0.00 0.00 39.94 2.01
215 216 8.570068 AAAAACCTGACTACACAGAAGTAAAA 57.430 30.769 0.00 0.00 39.94 1.52
216 217 8.570068 AAAACCTGACTACACAGAAGTAAAAA 57.430 30.769 0.00 0.00 39.94 1.94
217 218 7.549615 AACCTGACTACACAGAAGTAAAAAC 57.450 36.000 0.00 0.00 39.94 2.43
218 219 5.751990 ACCTGACTACACAGAAGTAAAAACG 59.248 40.000 0.00 0.00 39.94 3.60
219 220 5.981315 CCTGACTACACAGAAGTAAAAACGA 59.019 40.000 0.00 0.00 39.94 3.85
220 221 6.645415 CCTGACTACACAGAAGTAAAAACGAT 59.355 38.462 0.00 0.00 39.94 3.73
221 222 7.148787 CCTGACTACACAGAAGTAAAAACGATC 60.149 40.741 0.00 0.00 39.94 3.69
222 223 6.643770 TGACTACACAGAAGTAAAAACGATCC 59.356 38.462 0.00 0.00 0.00 3.36
223 224 6.518493 ACTACACAGAAGTAAAAACGATCCA 58.482 36.000 0.00 0.00 0.00 3.41
224 225 5.668558 ACACAGAAGTAAAAACGATCCAC 57.331 39.130 0.00 0.00 0.00 4.02
226 227 3.185797 ACAGAAGTAAAAACGATCCACGC 59.814 43.478 0.00 0.00 46.94 5.34
227 228 2.410730 AGAAGTAAAAACGATCCACGCG 59.589 45.455 3.53 3.53 46.94 6.01
228 229 0.441145 AGTAAAAACGATCCACGCGC 59.559 50.000 5.73 0.00 46.94 6.86
229 230 0.850391 GTAAAAACGATCCACGCGCG 60.850 55.000 30.96 30.96 46.94 6.86
230 231 1.283613 TAAAAACGATCCACGCGCGT 61.284 50.000 32.73 32.73 46.94 6.01
231 232 2.757946 AAAAACGATCCACGCGCGTG 62.758 55.000 46.27 46.27 46.94 5.34
246 247 4.851179 GTGAATCCGGCGACCCCC 62.851 72.222 9.30 0.00 0.00 5.40
260 261 2.038329 CCCCCTCACCACCTACGA 59.962 66.667 0.00 0.00 0.00 3.43
261 262 2.356780 CCCCCTCACCACCTACGAC 61.357 68.421 0.00 0.00 0.00 4.34
262 263 2.356780 CCCCTCACCACCTACGACC 61.357 68.421 0.00 0.00 0.00 4.79
263 264 2.707849 CCCTCACCACCTACGACCG 61.708 68.421 0.00 0.00 0.00 4.79
264 265 1.676635 CCTCACCACCTACGACCGA 60.677 63.158 0.00 0.00 0.00 4.69
265 266 1.654954 CCTCACCACCTACGACCGAG 61.655 65.000 0.00 0.00 0.00 4.63
266 267 1.654954 CTCACCACCTACGACCGAGG 61.655 65.000 0.00 1.75 40.22 4.63
268 269 1.676967 ACCACCTACGACCGAGGTC 60.677 63.158 12.07 12.07 44.33 3.85
305 306 2.342279 CGGAGGACGGTGCTGAAA 59.658 61.111 6.97 0.00 39.42 2.69
306 307 1.738099 CGGAGGACGGTGCTGAAAG 60.738 63.158 6.97 0.00 39.42 2.62
307 308 1.671742 GGAGGACGGTGCTGAAAGA 59.328 57.895 6.97 0.00 34.07 2.52
308 309 0.250513 GGAGGACGGTGCTGAAAGAT 59.749 55.000 6.97 0.00 34.07 2.40
309 310 1.363744 GAGGACGGTGCTGAAAGATG 58.636 55.000 6.97 0.00 34.07 2.90
310 311 0.036010 AGGACGGTGCTGAAAGATGG 60.036 55.000 0.00 0.00 34.07 3.51
311 312 1.648467 GGACGGTGCTGAAAGATGGC 61.648 60.000 0.00 0.00 34.07 4.40
312 313 1.648467 GACGGTGCTGAAAGATGGCC 61.648 60.000 0.00 0.00 34.07 5.36
313 314 1.377725 CGGTGCTGAAAGATGGCCT 60.378 57.895 3.32 0.00 34.07 5.19
314 315 1.372087 CGGTGCTGAAAGATGGCCTC 61.372 60.000 3.32 0.00 34.07 4.70
315 316 0.034670 GGTGCTGAAAGATGGCCTCT 60.035 55.000 3.32 0.95 34.07 3.69
316 317 1.377536 GTGCTGAAAGATGGCCTCTC 58.622 55.000 3.32 0.20 34.07 3.20
317 318 0.254178 TGCTGAAAGATGGCCTCTCC 59.746 55.000 3.32 1.53 34.07 3.71
318 319 0.545646 GCTGAAAGATGGCCTCTCCT 59.454 55.000 3.32 0.00 34.07 3.69
319 320 1.746516 GCTGAAAGATGGCCTCTCCTG 60.747 57.143 3.32 5.88 34.07 3.86
320 321 0.914644 TGAAAGATGGCCTCTCCTGG 59.085 55.000 3.32 0.00 31.03 4.45
321 322 4.964832 CTGAAAGATGGCCTCTCCTGGC 62.965 59.091 3.32 0.00 45.08 4.85
338 339 4.530857 CGGCGGCTAGGGTTCCAG 62.531 72.222 7.61 0.00 0.00 3.86
339 340 4.858680 GGCGGCTAGGGTTCCAGC 62.859 72.222 0.00 0.00 37.05 4.85
343 344 4.858680 GCTAGGGTTCCAGCCGCC 62.859 72.222 0.00 0.00 41.56 6.13
344 345 3.399181 CTAGGGTTCCAGCCGCCA 61.399 66.667 0.00 0.00 41.56 5.69
345 346 3.391665 CTAGGGTTCCAGCCGCCAG 62.392 68.421 0.00 0.00 41.56 4.85
349 350 4.785453 GTTCCAGCCGCCAGGGAG 62.785 72.222 0.00 0.00 38.47 4.30
359 360 2.767496 CCAGGGAGCAGGGAGGAG 60.767 72.222 0.00 0.00 0.00 3.69
360 361 2.366167 CAGGGAGCAGGGAGGAGA 59.634 66.667 0.00 0.00 0.00 3.71
361 362 1.761667 CAGGGAGCAGGGAGGAGAG 60.762 68.421 0.00 0.00 0.00 3.20
362 363 1.938596 AGGGAGCAGGGAGGAGAGA 60.939 63.158 0.00 0.00 0.00 3.10
363 364 1.002274 GGGAGCAGGGAGGAGAGAA 59.998 63.158 0.00 0.00 0.00 2.87
364 365 0.618968 GGGAGCAGGGAGGAGAGAAA 60.619 60.000 0.00 0.00 0.00 2.52
365 366 1.280457 GGAGCAGGGAGGAGAGAAAA 58.720 55.000 0.00 0.00 0.00 2.29
366 367 1.630878 GGAGCAGGGAGGAGAGAAAAA 59.369 52.381 0.00 0.00 0.00 1.94
367 368 2.616765 GGAGCAGGGAGGAGAGAAAAAC 60.617 54.545 0.00 0.00 0.00 2.43
368 369 1.002544 AGCAGGGAGGAGAGAAAAACG 59.997 52.381 0.00 0.00 0.00 3.60
369 370 1.443802 CAGGGAGGAGAGAAAAACGC 58.556 55.000 0.00 0.00 0.00 4.84
370 371 1.002544 CAGGGAGGAGAGAAAAACGCT 59.997 52.381 0.00 0.00 0.00 5.07
371 372 1.700186 AGGGAGGAGAGAAAAACGCTT 59.300 47.619 0.00 0.00 0.00 4.68
372 373 1.807142 GGGAGGAGAGAAAAACGCTTG 59.193 52.381 0.00 0.00 0.00 4.01
373 374 1.807142 GGAGGAGAGAAAAACGCTTGG 59.193 52.381 0.00 0.00 0.00 3.61
374 375 1.197949 GAGGAGAGAAAAACGCTTGGC 59.802 52.381 0.00 0.00 0.00 4.52
386 387 2.813474 CTTGGCGTGGCGATCGAA 60.813 61.111 21.57 2.52 0.00 3.71
387 388 3.083600 CTTGGCGTGGCGATCGAAC 62.084 63.158 21.57 14.95 0.00 3.95
389 390 4.814294 GGCGTGGCGATCGAACCT 62.814 66.667 21.57 0.00 0.00 3.50
390 391 2.813908 GCGTGGCGATCGAACCTT 60.814 61.111 21.57 0.00 0.00 3.50
391 392 3.081133 CGTGGCGATCGAACCTTG 58.919 61.111 21.57 4.50 0.00 3.61
392 393 1.736645 CGTGGCGATCGAACCTTGT 60.737 57.895 21.57 0.00 0.00 3.16
393 394 0.457166 CGTGGCGATCGAACCTTGTA 60.457 55.000 21.57 0.00 0.00 2.41
394 395 1.801395 CGTGGCGATCGAACCTTGTAT 60.801 52.381 21.57 0.00 0.00 2.29
395 396 2.277084 GTGGCGATCGAACCTTGTATT 58.723 47.619 21.57 0.00 0.00 1.89
396 397 2.676342 GTGGCGATCGAACCTTGTATTT 59.324 45.455 21.57 0.00 0.00 1.40
397 398 2.933906 TGGCGATCGAACCTTGTATTTC 59.066 45.455 21.57 0.00 0.00 2.17
398 399 3.195661 GGCGATCGAACCTTGTATTTCT 58.804 45.455 21.57 0.00 0.00 2.52
399 400 4.142116 TGGCGATCGAACCTTGTATTTCTA 60.142 41.667 21.57 0.00 0.00 2.10
400 401 4.989168 GGCGATCGAACCTTGTATTTCTAT 59.011 41.667 21.57 0.00 0.00 1.98
401 402 5.107453 GGCGATCGAACCTTGTATTTCTATG 60.107 44.000 21.57 0.00 0.00 2.23
402 403 5.612709 GCGATCGAACCTTGTATTTCTATGC 60.613 44.000 21.57 0.00 0.00 3.14
403 404 5.692204 CGATCGAACCTTGTATTTCTATGCT 59.308 40.000 10.26 0.00 0.00 3.79
404 405 6.861572 CGATCGAACCTTGTATTTCTATGCTA 59.138 38.462 10.26 0.00 0.00 3.49
405 406 7.148950 CGATCGAACCTTGTATTTCTATGCTAC 60.149 40.741 10.26 0.00 0.00 3.58
406 407 7.108841 TCGAACCTTGTATTTCTATGCTACT 57.891 36.000 0.00 0.00 0.00 2.57
407 408 7.553334 TCGAACCTTGTATTTCTATGCTACTT 58.447 34.615 0.00 0.00 0.00 2.24
408 409 7.705325 TCGAACCTTGTATTTCTATGCTACTTC 59.295 37.037 0.00 0.00 0.00 3.01
409 410 7.042658 CGAACCTTGTATTTCTATGCTACTTCC 60.043 40.741 0.00 0.00 0.00 3.46
410 411 7.439108 ACCTTGTATTTCTATGCTACTTCCT 57.561 36.000 0.00 0.00 0.00 3.36
411 412 7.275920 ACCTTGTATTTCTATGCTACTTCCTG 58.724 38.462 0.00 0.00 0.00 3.86
412 413 6.708054 CCTTGTATTTCTATGCTACTTCCTGG 59.292 42.308 0.00 0.00 0.00 4.45
413 414 6.174720 TGTATTTCTATGCTACTTCCTGGG 57.825 41.667 0.00 0.00 0.00 4.45
414 415 5.903010 TGTATTTCTATGCTACTTCCTGGGA 59.097 40.000 0.00 0.00 0.00 4.37
415 416 5.975988 ATTTCTATGCTACTTCCTGGGAA 57.024 39.130 1.90 1.90 0.00 3.97
416 417 5.772393 TTTCTATGCTACTTCCTGGGAAA 57.228 39.130 3.55 0.00 33.34 3.13
417 418 5.772393 TTCTATGCTACTTCCTGGGAAAA 57.228 39.130 3.55 0.00 33.34 2.29
433 434 1.349357 GAAAAGAGGGAGCTGACCAGT 59.651 52.381 6.80 0.00 0.00 4.00
438 439 1.280421 GAGGGAGCTGACCAGTTGATT 59.720 52.381 6.80 0.00 0.00 2.57
448 449 2.948979 GACCAGTTGATTGTGTGTCCAA 59.051 45.455 0.00 0.00 0.00 3.53
531 532 0.961019 TTTTCTGCTGCCATGTGTCC 59.039 50.000 0.00 0.00 0.00 4.02
540 541 1.210234 TGCCATGTGTCCTGATCGATT 59.790 47.619 0.00 0.00 0.00 3.34
614 615 0.436913 CGTAATGCGCGTCTTTGTCA 59.563 50.000 8.43 0.00 0.00 3.58
621 622 0.375454 CGCGTCTTTGTCACCAACAA 59.625 50.000 0.00 0.00 46.11 2.83
632 633 4.362279 TGTCACCAACAACTTCTACGTAC 58.638 43.478 0.00 0.00 34.03 3.67
752 754 2.904866 GCAAGGCCGGTTCACACA 60.905 61.111 1.90 0.00 0.00 3.72
754 756 1.580942 CAAGGCCGGTTCACACATG 59.419 57.895 1.90 0.00 0.00 3.21
794 796 3.542676 CGGCCGGCCATACCTACA 61.543 66.667 42.78 0.00 35.61 2.74
880 910 1.404391 CACTCCTGCATTTCATCAGCC 59.596 52.381 0.00 0.00 0.00 4.85
910 940 0.961019 GCAGCATGTGTTTCCTGGAA 59.039 50.000 4.68 4.68 39.31 3.53
981 1036 4.137872 GCGCCATGGCTGCAACAT 62.138 61.111 33.77 0.00 39.24 2.71
998 1053 0.182061 CATAGGTCATGGCTGCCTGT 59.818 55.000 21.03 5.74 33.03 4.00
1006 1061 0.682209 ATGGCTGCCTGTGATGGAAC 60.682 55.000 21.03 0.00 0.00 3.62
1013 1068 1.616725 GCCTGTGATGGAACCATGGAA 60.617 52.381 21.47 0.73 36.70 3.53
1029 1084 2.722094 TGGAAACATGCATGGGACTAC 58.278 47.619 29.41 14.80 33.40 2.73
1030 1085 2.040947 TGGAAACATGCATGGGACTACA 59.959 45.455 29.41 16.99 33.40 2.74
1031 1086 2.684881 GGAAACATGCATGGGACTACAG 59.315 50.000 29.41 2.41 0.00 2.74
1059 1114 0.694444 ACACCTCCACACTCCCAGTT 60.694 55.000 0.00 0.00 0.00 3.16
1099 1183 1.070445 CCAGCTCAATGGCCTCTCTAG 59.930 57.143 3.32 0.00 32.48 2.43
1167 1251 2.295909 GGTCCTCTCATCATCTTCTCCG 59.704 54.545 0.00 0.00 0.00 4.63
1395 1482 1.743958 ACTCATGTCGGTAACCTCTCG 59.256 52.381 0.00 0.00 0.00 4.04
1457 1544 1.003118 CTCCATTCCACCCGAACTTGA 59.997 52.381 0.00 0.00 31.79 3.02
1819 1909 2.352805 GCCTAGTGCCACAAGCCT 59.647 61.111 0.00 0.00 42.71 4.58
2027 2118 5.415701 TGAGTAGAAATTCCTTTGTGGATGC 59.584 40.000 0.00 0.00 45.68 3.91
2121 2213 3.828875 ATTCCAGCTACTCTAGGCAAC 57.171 47.619 0.00 0.00 0.00 4.17
2296 2388 7.068226 CCGAATTGTCTTACCTAAATTTGGGAT 59.932 37.037 25.78 12.90 38.85 3.85
2356 2448 6.574832 CGAATATAATGCAGATTTGAACGTGG 59.425 38.462 0.00 0.00 0.00 4.94
2711 2813 3.242739 CCAACACAAATAGGTATGCTCGC 60.243 47.826 0.00 0.00 0.00 5.03
3297 3420 4.687901 TTCACCTTGTCTTGACAGATCA 57.312 40.909 3.61 0.00 0.00 2.92
3410 3536 7.600375 GCTCAAAAAGAAAATTAAGAAGGAGGG 59.400 37.037 0.00 0.00 0.00 4.30
3420 3546 0.541863 AGAAGGAGGGGTACAATGCG 59.458 55.000 0.00 0.00 0.00 4.73
3748 3878 4.142271 CGAATGGAAGCTTAGAGACACTCT 60.142 45.833 0.00 6.53 43.83 3.24
4080 4233 5.337956 TTGATAATTATGGCTCCACCCAT 57.662 39.130 1.78 0.00 46.90 4.00
4292 4457 6.767902 GGTTCATCAAGCATTTCCTGTAGATA 59.232 38.462 0.00 0.00 0.00 1.98
4338 4503 1.423161 AGTGCAAGGCTCCTCTCTTTT 59.577 47.619 0.00 0.00 0.00 2.27
4433 4598 1.353103 CAAAGGATGACGATGCGCC 59.647 57.895 4.18 0.00 0.00 6.53
4508 4673 2.677199 AGACATCGTGTAGTGCAACAG 58.323 47.619 0.00 0.00 41.43 3.16
4561 4730 5.771666 CCTGTCCCATCTATAAATGTGCATT 59.228 40.000 0.00 0.00 0.00 3.56
4610 4779 9.799106 TTCCAATGTATTTCTTCTTCTTCTTCT 57.201 29.630 0.00 0.00 0.00 2.85
4611 4780 9.799106 TCCAATGTATTTCTTCTTCTTCTTCTT 57.201 29.630 0.00 0.00 0.00 2.52
4620 4789 9.898152 TTTCTTCTTCTTCTTCTTCTTCTTCTT 57.102 29.630 0.00 0.00 0.00 2.52
4621 4790 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4622 4791 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
4623 4792 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
4624 4793 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4625 4794 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
4626 4795 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
4627 4796 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4642 4811 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4645 4814 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4648 4817 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
4692 4861 4.725490 ACCTTAAGTAGAAAGCAAAGCCA 58.275 39.130 0.97 0.00 0.00 4.75
4696 4865 1.705186 AGTAGAAAGCAAAGCCAGGGA 59.295 47.619 0.00 0.00 0.00 4.20
4750 4930 2.827800 TGTTCTCTGAGCAAGTGGAG 57.172 50.000 0.00 0.00 0.00 3.86
4751 4931 2.042464 TGTTCTCTGAGCAAGTGGAGT 58.958 47.619 0.00 0.00 0.00 3.85
4752 4932 3.230976 TGTTCTCTGAGCAAGTGGAGTA 58.769 45.455 0.00 0.00 0.00 2.59
4753 4933 3.005897 TGTTCTCTGAGCAAGTGGAGTAC 59.994 47.826 0.00 0.00 0.00 2.73
4866 5046 7.375834 CAGTAAAACATAGTGAGTGTACTGGA 58.624 38.462 0.00 0.00 36.14 3.86
4882 5062 2.375174 ACTGGAGAGTTTTGTATGGGCA 59.625 45.455 0.00 0.00 0.00 5.36
5044 5226 1.447643 GCCGGCCTGATCATGTAGT 59.552 57.895 18.11 0.00 0.00 2.73
5105 5289 0.318120 TCCAACCGTCGACCCTAAAC 59.682 55.000 10.58 0.00 0.00 2.01
5110 5294 1.878775 CGTCGACCCTAAACGGACT 59.121 57.895 10.58 0.00 32.96 3.85
5124 5308 1.572941 GGACTTCCGTTTTGTCCGC 59.427 57.895 0.00 0.00 40.44 5.54
5142 5326 2.197577 CGCATTTTGTTCGTTTGGGTT 58.802 42.857 0.00 0.00 0.00 4.11
5152 5336 1.757118 TCGTTTGGGTTGGCAAAATGA 59.243 42.857 0.00 0.45 0.00 2.57
5158 5342 1.202475 GGGTTGGCAAAATGAACACGT 60.202 47.619 0.00 0.00 0.00 4.49
5177 5361 2.504244 CGTCCGCTCTTGGTCGTC 60.504 66.667 0.00 0.00 36.11 4.20
5312 5496 5.115480 ACATAAACAACAACAAAAGGCCAG 58.885 37.500 5.01 0.00 0.00 4.85
5315 5499 1.134175 ACAACAACAAAAGGCCAGTCG 59.866 47.619 5.01 0.00 0.00 4.18
5320 5504 1.021968 ACAAAAGGCCAGTCGAACAC 58.978 50.000 5.01 0.00 0.00 3.32
5332 5516 5.407387 GCCAGTCGAACACATTTCTTAACTA 59.593 40.000 0.00 0.00 0.00 2.24
5335 5519 7.797123 CCAGTCGAACACATTTCTTAACTAAAC 59.203 37.037 0.00 0.00 0.00 2.01
5336 5520 8.548721 CAGTCGAACACATTTCTTAACTAAACT 58.451 33.333 0.00 0.00 0.00 2.66
5424 5608 2.874780 CCGCTTTCGTCCTCGTCG 60.875 66.667 0.00 0.00 38.33 5.12
5447 5631 1.464376 ATGAGGTCGATGTAGGCCGG 61.464 60.000 0.00 0.00 41.68 6.13
5449 5633 4.944372 GGTCGATGTAGGCCGGCG 62.944 72.222 22.54 4.34 0.00 6.46
5467 5651 3.075005 GCGTCTGGAGGTGGGCTA 61.075 66.667 0.00 0.00 0.00 3.93
5508 5692 3.231736 ACCTGCGAAGGTGACCGT 61.232 61.111 16.56 0.00 41.33 4.83
5509 5693 2.738521 CCTGCGAAGGTGACCGTG 60.739 66.667 0.00 0.00 0.00 4.94
5510 5694 2.338620 CTGCGAAGGTGACCGTGA 59.661 61.111 0.00 0.00 0.00 4.35
5511 5695 1.079819 CTGCGAAGGTGACCGTGAT 60.080 57.895 0.00 0.00 0.00 3.06
5512 5696 1.354337 CTGCGAAGGTGACCGTGATG 61.354 60.000 0.00 0.00 0.00 3.07
5513 5697 2.740714 GCGAAGGTGACCGTGATGC 61.741 63.158 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.394712 GTGGACCTGTGCCCTCGG 62.395 72.222 0.00 0.00 0.00 4.63
14 15 4.394712 GGTGGACCTGTGCCCTCG 62.395 72.222 0.00 0.00 0.00 4.63
15 16 3.249189 TGGTGGACCTGTGCCCTC 61.249 66.667 0.00 0.00 36.82 4.30
16 17 3.570212 GTGGTGGACCTGTGCCCT 61.570 66.667 0.00 0.00 36.82 5.19
18 19 3.883744 CTCGTGGTGGACCTGTGCC 62.884 68.421 0.00 0.00 36.82 5.01
19 20 2.357517 CTCGTGGTGGACCTGTGC 60.358 66.667 0.00 0.00 36.82 4.57
20 21 1.544825 ATCCTCGTGGTGGACCTGTG 61.545 60.000 2.99 0.00 36.30 3.66
21 22 1.229209 ATCCTCGTGGTGGACCTGT 60.229 57.895 2.99 0.00 36.30 4.00
22 23 1.219124 CATCCTCGTGGTGGACCTG 59.781 63.158 2.99 0.00 36.30 4.00
23 24 1.229209 ACATCCTCGTGGTGGACCT 60.229 57.895 2.99 0.00 36.30 3.85
24 25 1.218316 GACATCCTCGTGGTGGACC 59.782 63.158 2.99 0.00 36.30 4.46
25 26 1.153823 CGACATCCTCGTGGTGGAC 60.154 63.158 2.99 0.00 37.64 4.02
26 27 3.001902 GCGACATCCTCGTGGTGGA 62.002 63.158 2.99 0.00 44.92 4.02
27 28 2.509336 GCGACATCCTCGTGGTGG 60.509 66.667 2.99 0.00 44.92 4.61
28 29 2.509336 GGCGACATCCTCGTGGTG 60.509 66.667 2.99 4.23 44.92 4.17
29 30 4.129737 CGGCGACATCCTCGTGGT 62.130 66.667 0.00 0.00 44.92 4.16
47 48 2.869503 AAGTAAGGATGGCGTGGCGG 62.870 60.000 0.00 0.00 0.00 6.13
48 49 1.449601 AAGTAAGGATGGCGTGGCG 60.450 57.895 0.00 0.00 0.00 5.69
49 50 0.392461 TCAAGTAAGGATGGCGTGGC 60.392 55.000 0.00 0.00 0.00 5.01
50 51 1.737793 GTTCAAGTAAGGATGGCGTGG 59.262 52.381 0.00 0.00 0.00 4.94
51 52 2.416547 CTGTTCAAGTAAGGATGGCGTG 59.583 50.000 0.00 0.00 0.00 5.34
52 53 2.301870 TCTGTTCAAGTAAGGATGGCGT 59.698 45.455 0.00 0.00 0.00 5.68
53 54 2.673368 GTCTGTTCAAGTAAGGATGGCG 59.327 50.000 0.00 0.00 0.00 5.69
54 55 3.686726 CAGTCTGTTCAAGTAAGGATGGC 59.313 47.826 0.00 0.00 0.00 4.40
55 56 4.256920 CCAGTCTGTTCAAGTAAGGATGG 58.743 47.826 0.00 0.00 0.00 3.51
56 57 4.899502 ACCAGTCTGTTCAAGTAAGGATG 58.100 43.478 0.00 0.00 0.00 3.51
57 58 5.568620 AACCAGTCTGTTCAAGTAAGGAT 57.431 39.130 0.00 0.00 0.00 3.24
58 59 5.365619 GAAACCAGTCTGTTCAAGTAAGGA 58.634 41.667 0.00 0.00 0.00 3.36
59 60 4.515567 GGAAACCAGTCTGTTCAAGTAAGG 59.484 45.833 0.00 0.00 0.00 2.69
60 61 5.123227 TGGAAACCAGTCTGTTCAAGTAAG 58.877 41.667 0.00 0.00 0.00 2.34
61 62 5.105567 TGGAAACCAGTCTGTTCAAGTAA 57.894 39.130 0.00 0.00 0.00 2.24
62 63 4.764050 TGGAAACCAGTCTGTTCAAGTA 57.236 40.909 0.00 0.00 0.00 2.24
63 64 3.644966 TGGAAACCAGTCTGTTCAAGT 57.355 42.857 0.00 0.00 0.00 3.16
64 65 4.981806 TTTGGAAACCAGTCTGTTCAAG 57.018 40.909 0.00 0.00 33.81 3.02
65 66 4.340950 GGATTTGGAAACCAGTCTGTTCAA 59.659 41.667 0.00 0.00 33.81 2.69
66 67 3.888930 GGATTTGGAAACCAGTCTGTTCA 59.111 43.478 0.00 0.00 33.81 3.18
67 68 3.888930 TGGATTTGGAAACCAGTCTGTTC 59.111 43.478 0.00 0.00 33.81 3.18
68 69 3.909732 TGGATTTGGAAACCAGTCTGTT 58.090 40.909 0.00 0.00 33.81 3.16
69 70 3.593442 TGGATTTGGAAACCAGTCTGT 57.407 42.857 0.00 0.00 33.81 3.41
70 71 3.445096 GGATGGATTTGGAAACCAGTCTG 59.555 47.826 0.00 0.00 37.12 3.51
71 72 3.564352 GGGATGGATTTGGAAACCAGTCT 60.564 47.826 0.00 0.00 37.12 3.24
72 73 2.760650 GGGATGGATTTGGAAACCAGTC 59.239 50.000 0.00 0.00 37.12 3.51
73 74 2.559705 GGGGATGGATTTGGAAACCAGT 60.560 50.000 0.00 0.00 37.12 4.00
74 75 2.110578 GGGGATGGATTTGGAAACCAG 58.889 52.381 0.00 0.00 37.12 4.00
75 76 1.434773 TGGGGATGGATTTGGAAACCA 59.565 47.619 0.00 0.00 38.09 3.67
76 77 2.236146 GTTGGGGATGGATTTGGAAACC 59.764 50.000 0.00 0.00 0.00 3.27
77 78 2.236146 GGTTGGGGATGGATTTGGAAAC 59.764 50.000 0.00 0.00 0.00 2.78
78 79 2.158097 TGGTTGGGGATGGATTTGGAAA 60.158 45.455 0.00 0.00 0.00 3.13
79 80 1.434773 TGGTTGGGGATGGATTTGGAA 59.565 47.619 0.00 0.00 0.00 3.53
80 81 1.088269 TGGTTGGGGATGGATTTGGA 58.912 50.000 0.00 0.00 0.00 3.53
81 82 2.179377 ATGGTTGGGGATGGATTTGG 57.821 50.000 0.00 0.00 0.00 3.28
82 83 3.117169 TCCTATGGTTGGGGATGGATTTG 60.117 47.826 0.00 0.00 0.00 2.32
83 84 3.117131 GTCCTATGGTTGGGGATGGATTT 60.117 47.826 0.00 0.00 0.00 2.17
84 85 2.447047 GTCCTATGGTTGGGGATGGATT 59.553 50.000 0.00 0.00 0.00 3.01
85 86 2.065799 GTCCTATGGTTGGGGATGGAT 58.934 52.381 0.00 0.00 0.00 3.41
86 87 1.518367 GTCCTATGGTTGGGGATGGA 58.482 55.000 0.00 0.00 0.00 3.41
87 88 0.478507 GGTCCTATGGTTGGGGATGG 59.521 60.000 0.00 0.00 0.00 3.51
88 89 0.108585 CGGTCCTATGGTTGGGGATG 59.891 60.000 0.00 0.00 0.00 3.51
89 90 0.030501 TCGGTCCTATGGTTGGGGAT 60.031 55.000 0.00 0.00 0.00 3.85
90 91 0.030501 ATCGGTCCTATGGTTGGGGA 60.031 55.000 0.00 0.00 0.00 4.81
91 92 0.108585 CATCGGTCCTATGGTTGGGG 59.891 60.000 0.00 0.00 0.00 4.96
92 93 0.108585 CCATCGGTCCTATGGTTGGG 59.891 60.000 13.32 0.00 39.30 4.12
93 94 0.535102 GCCATCGGTCCTATGGTTGG 60.535 60.000 20.67 5.91 44.87 3.77
94 95 0.535102 GGCCATCGGTCCTATGGTTG 60.535 60.000 20.67 0.07 44.87 3.77
95 96 0.694444 AGGCCATCGGTCCTATGGTT 60.694 55.000 20.67 9.30 44.87 3.67
96 97 1.074471 AGGCCATCGGTCCTATGGT 60.074 57.895 20.67 2.52 44.87 3.55
97 98 1.674057 GAGGCCATCGGTCCTATGG 59.326 63.158 16.59 16.59 45.68 2.74
107 108 1.144936 CTTCCCTGACGAGGCCATC 59.855 63.158 5.01 0.00 38.17 3.51
108 109 2.370445 CCTTCCCTGACGAGGCCAT 61.370 63.158 5.01 0.00 38.17 4.40
109 110 2.822643 ATCCTTCCCTGACGAGGCCA 62.823 60.000 5.01 0.00 38.17 5.36
110 111 2.034048 GATCCTTCCCTGACGAGGCC 62.034 65.000 0.00 0.00 38.17 5.19
111 112 1.443828 GATCCTTCCCTGACGAGGC 59.556 63.158 0.00 0.00 38.17 4.70
112 113 1.739338 CGGATCCTTCCCTGACGAGG 61.739 65.000 10.75 0.00 39.01 4.63
113 114 0.752009 TCGGATCCTTCCCTGACGAG 60.752 60.000 10.75 0.00 39.01 4.18
114 115 0.323999 TTCGGATCCTTCCCTGACGA 60.324 55.000 10.75 0.00 39.01 4.20
115 116 0.535335 TTTCGGATCCTTCCCTGACG 59.465 55.000 10.75 0.00 39.01 4.35
116 117 2.781681 TTTTCGGATCCTTCCCTGAC 57.218 50.000 10.75 0.00 39.01 3.51
117 118 3.523564 AGATTTTTCGGATCCTTCCCTGA 59.476 43.478 10.75 0.00 39.01 3.86
118 119 3.891049 AGATTTTTCGGATCCTTCCCTG 58.109 45.455 10.75 0.00 39.01 4.45
119 120 4.592997 AAGATTTTTCGGATCCTTCCCT 57.407 40.909 10.75 0.00 39.01 4.20
120 121 6.961360 ATAAAGATTTTTCGGATCCTTCCC 57.039 37.500 10.75 0.00 39.01 3.97
121 122 7.996385 TGAATAAAGATTTTTCGGATCCTTCC 58.004 34.615 10.75 0.00 38.81 3.46
122 123 9.290483 GTTGAATAAAGATTTTTCGGATCCTTC 57.710 33.333 10.75 2.53 0.00 3.46
123 124 8.802267 TGTTGAATAAAGATTTTTCGGATCCTT 58.198 29.630 10.75 0.00 0.00 3.36
124 125 8.244113 GTGTTGAATAAAGATTTTTCGGATCCT 58.756 33.333 10.75 0.00 0.00 3.24
125 126 7.488150 GGTGTTGAATAAAGATTTTTCGGATCC 59.512 37.037 0.00 0.00 0.00 3.36
126 127 7.218204 CGGTGTTGAATAAAGATTTTTCGGATC 59.782 37.037 0.00 0.00 0.00 3.36
127 128 7.027161 CGGTGTTGAATAAAGATTTTTCGGAT 58.973 34.615 0.00 0.00 0.00 4.18
128 129 6.016943 ACGGTGTTGAATAAAGATTTTTCGGA 60.017 34.615 0.00 0.00 0.00 4.55
129 130 6.146898 ACGGTGTTGAATAAAGATTTTTCGG 58.853 36.000 0.00 0.00 0.00 4.30
130 131 6.853872 TGACGGTGTTGAATAAAGATTTTTCG 59.146 34.615 0.00 0.00 0.00 3.46
131 132 8.742554 ATGACGGTGTTGAATAAAGATTTTTC 57.257 30.769 0.00 0.00 0.00 2.29
132 133 8.356657 TGATGACGGTGTTGAATAAAGATTTTT 58.643 29.630 0.00 0.00 0.00 1.94
133 134 7.881142 TGATGACGGTGTTGAATAAAGATTTT 58.119 30.769 0.00 0.00 0.00 1.82
134 135 7.447374 TGATGACGGTGTTGAATAAAGATTT 57.553 32.000 0.00 0.00 0.00 2.17
135 136 7.465916 CGATGATGACGGTGTTGAATAAAGATT 60.466 37.037 0.00 0.00 0.00 2.40
136 137 6.018751 CGATGATGACGGTGTTGAATAAAGAT 60.019 38.462 0.00 0.00 0.00 2.40
137 138 5.290885 CGATGATGACGGTGTTGAATAAAGA 59.709 40.000 0.00 0.00 0.00 2.52
138 139 5.492854 CGATGATGACGGTGTTGAATAAAG 58.507 41.667 0.00 0.00 0.00 1.85
139 140 4.201773 GCGATGATGACGGTGTTGAATAAA 60.202 41.667 0.00 0.00 0.00 1.40
140 141 3.308595 GCGATGATGACGGTGTTGAATAA 59.691 43.478 0.00 0.00 0.00 1.40
141 142 2.863740 GCGATGATGACGGTGTTGAATA 59.136 45.455 0.00 0.00 0.00 1.75
142 143 1.665679 GCGATGATGACGGTGTTGAAT 59.334 47.619 0.00 0.00 0.00 2.57
143 144 1.075542 GCGATGATGACGGTGTTGAA 58.924 50.000 0.00 0.00 0.00 2.69
144 145 0.739462 GGCGATGATGACGGTGTTGA 60.739 55.000 0.00 0.00 0.00 3.18
145 146 1.715585 GGCGATGATGACGGTGTTG 59.284 57.895 0.00 0.00 0.00 3.33
146 147 1.809619 CGGCGATGATGACGGTGTT 60.810 57.895 0.00 0.00 36.50 3.32
147 148 2.202743 CGGCGATGATGACGGTGT 60.203 61.111 0.00 0.00 36.50 4.16
148 149 3.630148 GCGGCGATGATGACGGTG 61.630 66.667 12.98 0.00 41.85 4.94
149 150 4.891727 GGCGGCGATGATGACGGT 62.892 66.667 12.98 0.00 41.85 4.83
151 152 4.923710 TCGGCGGCGATGATGACG 62.924 66.667 31.46 0.00 45.26 4.35
152 153 2.584970 TTCGGCGGCGATGATGAC 60.585 61.111 35.04 0.00 0.00 3.06
153 154 2.279451 CTTCGGCGGCGATGATGA 60.279 61.111 34.18 20.02 0.00 2.92
154 155 4.005472 GCTTCGGCGGCGATGATG 62.005 66.667 39.07 27.08 0.00 3.07
164 165 1.076533 TTCATCGTCTTCGCTTCGGC 61.077 55.000 0.00 0.00 36.96 5.54
165 166 0.640768 GTTCATCGTCTTCGCTTCGG 59.359 55.000 0.00 0.00 36.96 4.30
166 167 1.318785 CTGTTCATCGTCTTCGCTTCG 59.681 52.381 0.00 0.00 36.96 3.79
167 168 1.059835 GCTGTTCATCGTCTTCGCTTC 59.940 52.381 0.00 0.00 36.96 3.86
168 169 1.071605 GCTGTTCATCGTCTTCGCTT 58.928 50.000 0.00 0.00 36.96 4.68
169 170 0.737715 GGCTGTTCATCGTCTTCGCT 60.738 55.000 0.00 0.00 36.96 4.93
170 171 0.737715 AGGCTGTTCATCGTCTTCGC 60.738 55.000 0.00 0.00 36.96 4.70
171 172 2.561733 TAGGCTGTTCATCGTCTTCG 57.438 50.000 0.00 0.00 38.55 3.79
172 173 5.383130 GTTTTTAGGCTGTTCATCGTCTTC 58.617 41.667 0.00 0.00 0.00 2.87
173 174 4.215613 GGTTTTTAGGCTGTTCATCGTCTT 59.784 41.667 0.00 0.00 0.00 3.01
174 175 3.751698 GGTTTTTAGGCTGTTCATCGTCT 59.248 43.478 0.00 0.00 0.00 4.18
175 176 3.751698 AGGTTTTTAGGCTGTTCATCGTC 59.248 43.478 0.00 0.00 0.00 4.20
176 177 3.502211 CAGGTTTTTAGGCTGTTCATCGT 59.498 43.478 0.00 0.00 0.00 3.73
177 178 3.751175 TCAGGTTTTTAGGCTGTTCATCG 59.249 43.478 0.00 0.00 0.00 3.84
178 179 4.762251 AGTCAGGTTTTTAGGCTGTTCATC 59.238 41.667 0.00 0.00 0.00 2.92
179 180 4.729868 AGTCAGGTTTTTAGGCTGTTCAT 58.270 39.130 0.00 0.00 0.00 2.57
180 181 4.164843 AGTCAGGTTTTTAGGCTGTTCA 57.835 40.909 0.00 0.00 0.00 3.18
181 182 5.049612 GTGTAGTCAGGTTTTTAGGCTGTTC 60.050 44.000 0.00 0.00 0.00 3.18
182 183 4.820173 GTGTAGTCAGGTTTTTAGGCTGTT 59.180 41.667 0.00 0.00 0.00 3.16
183 184 4.141574 TGTGTAGTCAGGTTTTTAGGCTGT 60.142 41.667 0.00 0.00 0.00 4.40
184 185 4.385825 TGTGTAGTCAGGTTTTTAGGCTG 58.614 43.478 0.00 0.00 0.00 4.85
185 186 4.347000 TCTGTGTAGTCAGGTTTTTAGGCT 59.653 41.667 0.00 0.00 36.25 4.58
186 187 4.638304 TCTGTGTAGTCAGGTTTTTAGGC 58.362 43.478 0.00 0.00 36.25 3.93
187 188 6.289064 ACTTCTGTGTAGTCAGGTTTTTAGG 58.711 40.000 0.00 0.00 36.25 2.69
188 189 8.882415 TTACTTCTGTGTAGTCAGGTTTTTAG 57.118 34.615 0.00 0.00 36.25 1.85
189 190 9.669887 TTTTACTTCTGTGTAGTCAGGTTTTTA 57.330 29.630 0.00 0.00 36.25 1.52
190 191 8.570068 TTTTACTTCTGTGTAGTCAGGTTTTT 57.430 30.769 0.00 0.00 36.25 1.94
191 192 8.456471 GTTTTTACTTCTGTGTAGTCAGGTTTT 58.544 33.333 0.00 0.00 36.25 2.43
192 193 7.201582 CGTTTTTACTTCTGTGTAGTCAGGTTT 60.202 37.037 0.00 0.00 36.25 3.27
193 194 6.257193 CGTTTTTACTTCTGTGTAGTCAGGTT 59.743 38.462 0.00 0.00 36.25 3.50
194 195 5.751990 CGTTTTTACTTCTGTGTAGTCAGGT 59.248 40.000 0.00 0.00 36.25 4.00
195 196 5.981315 TCGTTTTTACTTCTGTGTAGTCAGG 59.019 40.000 0.00 0.00 36.25 3.86
196 197 7.148787 GGATCGTTTTTACTTCTGTGTAGTCAG 60.149 40.741 0.00 0.00 36.85 3.51
197 198 6.643770 GGATCGTTTTTACTTCTGTGTAGTCA 59.356 38.462 0.00 0.00 0.00 3.41
198 199 6.643770 TGGATCGTTTTTACTTCTGTGTAGTC 59.356 38.462 0.00 0.00 0.00 2.59
199 200 6.423001 GTGGATCGTTTTTACTTCTGTGTAGT 59.577 38.462 0.00 0.00 0.00 2.73
200 201 6.399669 CGTGGATCGTTTTTACTTCTGTGTAG 60.400 42.308 0.00 0.00 34.52 2.74
201 202 5.403166 CGTGGATCGTTTTTACTTCTGTGTA 59.597 40.000 0.00 0.00 34.52 2.90
202 203 4.210537 CGTGGATCGTTTTTACTTCTGTGT 59.789 41.667 0.00 0.00 34.52 3.72
203 204 4.698276 CGTGGATCGTTTTTACTTCTGTG 58.302 43.478 0.00 0.00 34.52 3.66
204 205 3.185797 GCGTGGATCGTTTTTACTTCTGT 59.814 43.478 0.00 0.00 42.13 3.41
205 206 3.720920 CGCGTGGATCGTTTTTACTTCTG 60.721 47.826 0.00 0.00 42.13 3.02
206 207 2.410730 CGCGTGGATCGTTTTTACTTCT 59.589 45.455 0.00 0.00 42.13 2.85
207 208 2.754478 CGCGTGGATCGTTTTTACTTC 58.246 47.619 0.00 0.00 42.13 3.01
208 209 1.136169 GCGCGTGGATCGTTTTTACTT 60.136 47.619 8.43 0.00 42.13 2.24
209 210 0.441145 GCGCGTGGATCGTTTTTACT 59.559 50.000 8.43 0.00 42.13 2.24
210 211 0.850391 CGCGCGTGGATCGTTTTTAC 60.850 55.000 24.19 0.00 42.13 2.01
211 212 1.283613 ACGCGCGTGGATCGTTTTTA 61.284 50.000 37.37 0.00 42.13 1.52
212 213 2.172419 CGCGCGTGGATCGTTTTT 59.828 55.556 24.19 0.00 42.13 1.94
213 214 3.039588 ACGCGCGTGGATCGTTTT 61.040 55.556 37.37 5.31 42.13 2.43
214 215 3.773630 CACGCGCGTGGATCGTTT 61.774 61.111 45.91 16.61 42.00 3.60
229 230 4.851179 GGGGGTCGCCGGATTCAC 62.851 72.222 5.05 0.00 0.00 3.18
243 244 2.038329 TCGTAGGTGGTGAGGGGG 59.962 66.667 0.00 0.00 0.00 5.40
244 245 2.356780 GGTCGTAGGTGGTGAGGGG 61.357 68.421 0.00 0.00 0.00 4.79
245 246 2.707849 CGGTCGTAGGTGGTGAGGG 61.708 68.421 0.00 0.00 0.00 4.30
246 247 1.654954 CTCGGTCGTAGGTGGTGAGG 61.655 65.000 0.00 0.00 0.00 3.86
247 248 1.654954 CCTCGGTCGTAGGTGGTGAG 61.655 65.000 0.00 0.00 0.00 3.51
248 249 1.676635 CCTCGGTCGTAGGTGGTGA 60.677 63.158 0.00 0.00 0.00 4.02
249 250 1.975407 ACCTCGGTCGTAGGTGGTG 60.975 63.158 11.58 0.00 45.78 4.17
250 251 2.437897 ACCTCGGTCGTAGGTGGT 59.562 61.111 11.58 0.00 45.78 4.16
288 289 1.738099 CTTTCAGCACCGTCCTCCG 60.738 63.158 0.00 0.00 0.00 4.63
289 290 0.250513 ATCTTTCAGCACCGTCCTCC 59.749 55.000 0.00 0.00 0.00 4.30
290 291 1.363744 CATCTTTCAGCACCGTCCTC 58.636 55.000 0.00 0.00 0.00 3.71
291 292 0.036010 CCATCTTTCAGCACCGTCCT 60.036 55.000 0.00 0.00 0.00 3.85
292 293 1.648467 GCCATCTTTCAGCACCGTCC 61.648 60.000 0.00 0.00 0.00 4.79
293 294 1.648467 GGCCATCTTTCAGCACCGTC 61.648 60.000 0.00 0.00 0.00 4.79
294 295 1.675641 GGCCATCTTTCAGCACCGT 60.676 57.895 0.00 0.00 0.00 4.83
295 296 1.372087 GAGGCCATCTTTCAGCACCG 61.372 60.000 5.01 0.00 0.00 4.94
296 297 0.034670 AGAGGCCATCTTTCAGCACC 60.035 55.000 5.01 0.00 32.99 5.01
297 298 1.377536 GAGAGGCCATCTTTCAGCAC 58.622 55.000 5.01 0.00 38.84 4.40
298 299 0.254178 GGAGAGGCCATCTTTCAGCA 59.746 55.000 5.01 0.00 38.84 4.41
299 300 0.545646 AGGAGAGGCCATCTTTCAGC 59.454 55.000 5.01 0.00 38.84 4.26
300 301 1.134159 CCAGGAGAGGCCATCTTTCAG 60.134 57.143 5.01 0.00 38.84 3.02
301 302 0.914644 CCAGGAGAGGCCATCTTTCA 59.085 55.000 5.01 0.00 38.84 2.69
302 303 3.796764 CCAGGAGAGGCCATCTTTC 57.203 57.895 5.01 0.00 38.84 2.62
321 322 4.530857 CTGGAACCCTAGCCGCCG 62.531 72.222 0.00 0.00 0.00 6.46
322 323 4.858680 GCTGGAACCCTAGCCGCC 62.859 72.222 0.00 0.00 33.89 6.13
326 327 4.858680 GGCGGCTGGAACCCTAGC 62.859 72.222 0.00 0.00 39.17 3.42
327 328 3.391665 CTGGCGGCTGGAACCCTAG 62.392 68.421 11.43 0.00 0.00 3.02
328 329 3.399181 CTGGCGGCTGGAACCCTA 61.399 66.667 11.43 0.00 0.00 3.53
332 333 4.785453 CTCCCTGGCGGCTGGAAC 62.785 72.222 32.43 0.00 0.00 3.62
342 343 2.767496 CTCCTCCCTGCTCCCTGG 60.767 72.222 0.00 0.00 0.00 4.45
343 344 1.761667 CTCTCCTCCCTGCTCCCTG 60.762 68.421 0.00 0.00 0.00 4.45
344 345 1.522917 TTCTCTCCTCCCTGCTCCCT 61.523 60.000 0.00 0.00 0.00 4.20
345 346 0.618968 TTTCTCTCCTCCCTGCTCCC 60.619 60.000 0.00 0.00 0.00 4.30
346 347 1.280457 TTTTCTCTCCTCCCTGCTCC 58.720 55.000 0.00 0.00 0.00 4.70
347 348 2.705730 GTTTTTCTCTCCTCCCTGCTC 58.294 52.381 0.00 0.00 0.00 4.26
348 349 1.002544 CGTTTTTCTCTCCTCCCTGCT 59.997 52.381 0.00 0.00 0.00 4.24
349 350 1.443802 CGTTTTTCTCTCCTCCCTGC 58.556 55.000 0.00 0.00 0.00 4.85
350 351 1.002544 AGCGTTTTTCTCTCCTCCCTG 59.997 52.381 0.00 0.00 0.00 4.45
351 352 1.353091 AGCGTTTTTCTCTCCTCCCT 58.647 50.000 0.00 0.00 0.00 4.20
352 353 1.807142 CAAGCGTTTTTCTCTCCTCCC 59.193 52.381 0.00 0.00 0.00 4.30
353 354 1.807142 CCAAGCGTTTTTCTCTCCTCC 59.193 52.381 0.00 0.00 0.00 4.30
354 355 1.197949 GCCAAGCGTTTTTCTCTCCTC 59.802 52.381 0.00 0.00 0.00 3.71
355 356 1.239347 GCCAAGCGTTTTTCTCTCCT 58.761 50.000 0.00 0.00 0.00 3.69
356 357 3.775065 GCCAAGCGTTTTTCTCTCC 57.225 52.632 0.00 0.00 0.00 3.71
369 370 2.813474 TTCGATCGCCACGCCAAG 60.813 61.111 11.09 0.00 0.00 3.61
370 371 3.115892 GTTCGATCGCCACGCCAA 61.116 61.111 11.09 0.00 0.00 4.52
372 373 4.814294 AGGTTCGATCGCCACGCC 62.814 66.667 11.09 7.60 0.00 5.68
373 374 2.813908 AAGGTTCGATCGCCACGC 60.814 61.111 11.09 4.28 0.00 5.34
374 375 0.457166 TACAAGGTTCGATCGCCACG 60.457 55.000 11.09 4.72 0.00 4.94
375 376 1.935933 ATACAAGGTTCGATCGCCAC 58.064 50.000 11.09 9.45 0.00 5.01
376 377 2.684001 AATACAAGGTTCGATCGCCA 57.316 45.000 11.09 0.00 0.00 5.69
377 378 3.195661 AGAAATACAAGGTTCGATCGCC 58.804 45.455 11.09 6.98 0.00 5.54
378 379 5.612709 GCATAGAAATACAAGGTTCGATCGC 60.613 44.000 11.09 0.00 0.00 4.58
379 380 5.692204 AGCATAGAAATACAAGGTTCGATCG 59.308 40.000 9.36 9.36 0.00 3.69
380 381 7.868415 AGTAGCATAGAAATACAAGGTTCGATC 59.132 37.037 0.00 0.00 0.00 3.69
381 382 7.727181 AGTAGCATAGAAATACAAGGTTCGAT 58.273 34.615 0.00 0.00 0.00 3.59
382 383 7.108841 AGTAGCATAGAAATACAAGGTTCGA 57.891 36.000 0.00 0.00 0.00 3.71
383 384 7.042658 GGAAGTAGCATAGAAATACAAGGTTCG 60.043 40.741 0.00 0.00 0.00 3.95
384 385 7.988028 AGGAAGTAGCATAGAAATACAAGGTTC 59.012 37.037 0.00 0.00 0.00 3.62
385 386 7.770897 CAGGAAGTAGCATAGAAATACAAGGTT 59.229 37.037 0.00 0.00 0.00 3.50
386 387 7.275920 CAGGAAGTAGCATAGAAATACAAGGT 58.724 38.462 0.00 0.00 0.00 3.50
387 388 6.708054 CCAGGAAGTAGCATAGAAATACAAGG 59.292 42.308 0.00 0.00 0.00 3.61
388 389 6.708054 CCCAGGAAGTAGCATAGAAATACAAG 59.292 42.308 0.00 0.00 0.00 3.16
389 390 6.385759 TCCCAGGAAGTAGCATAGAAATACAA 59.614 38.462 0.00 0.00 0.00 2.41
390 391 5.903010 TCCCAGGAAGTAGCATAGAAATACA 59.097 40.000 0.00 0.00 0.00 2.29
391 392 6.420913 TCCCAGGAAGTAGCATAGAAATAC 57.579 41.667 0.00 0.00 0.00 1.89
392 393 7.446106 TTTCCCAGGAAGTAGCATAGAAATA 57.554 36.000 0.00 0.00 35.38 1.40
393 394 5.975988 TTCCCAGGAAGTAGCATAGAAAT 57.024 39.130 0.00 0.00 0.00 2.17
394 395 5.772393 TTTCCCAGGAAGTAGCATAGAAA 57.228 39.130 0.00 0.00 35.38 2.52
395 396 5.487488 TCTTTTCCCAGGAAGTAGCATAGAA 59.513 40.000 0.00 0.00 35.38 2.10
396 397 5.030147 TCTTTTCCCAGGAAGTAGCATAGA 58.970 41.667 0.00 0.00 35.38 1.98
397 398 5.359194 TCTTTTCCCAGGAAGTAGCATAG 57.641 43.478 0.00 0.00 35.38 2.23
398 399 4.164221 CCTCTTTTCCCAGGAAGTAGCATA 59.836 45.833 0.00 0.00 35.38 3.14
399 400 3.054065 CCTCTTTTCCCAGGAAGTAGCAT 60.054 47.826 0.00 0.00 35.38 3.79
400 401 2.305927 CCTCTTTTCCCAGGAAGTAGCA 59.694 50.000 0.00 0.00 35.38 3.49
401 402 2.356227 CCCTCTTTTCCCAGGAAGTAGC 60.356 54.545 0.00 0.00 35.38 3.58
402 403 3.182152 TCCCTCTTTTCCCAGGAAGTAG 58.818 50.000 0.00 2.33 35.38 2.57
403 404 3.182152 CTCCCTCTTTTCCCAGGAAGTA 58.818 50.000 0.00 0.00 35.38 2.24
404 405 1.988846 CTCCCTCTTTTCCCAGGAAGT 59.011 52.381 0.00 0.00 35.38 3.01
405 406 1.340502 GCTCCCTCTTTTCCCAGGAAG 60.341 57.143 0.00 0.00 35.38 3.46
406 407 0.698818 GCTCCCTCTTTTCCCAGGAA 59.301 55.000 0.00 0.00 30.32 3.36
407 408 0.178861 AGCTCCCTCTTTTCCCAGGA 60.179 55.000 0.00 0.00 30.32 3.86
408 409 0.034670 CAGCTCCCTCTTTTCCCAGG 60.035 60.000 0.00 0.00 0.00 4.45
409 410 0.987294 TCAGCTCCCTCTTTTCCCAG 59.013 55.000 0.00 0.00 0.00 4.45
410 411 0.693049 GTCAGCTCCCTCTTTTCCCA 59.307 55.000 0.00 0.00 0.00 4.37
411 412 0.034960 GGTCAGCTCCCTCTTTTCCC 60.035 60.000 0.00 0.00 0.00 3.97
412 413 0.693049 TGGTCAGCTCCCTCTTTTCC 59.307 55.000 0.87 0.00 0.00 3.13
413 414 1.349357 ACTGGTCAGCTCCCTCTTTTC 59.651 52.381 0.00 0.00 0.00 2.29
414 415 1.439543 ACTGGTCAGCTCCCTCTTTT 58.560 50.000 0.00 0.00 0.00 2.27
415 416 1.072965 CAACTGGTCAGCTCCCTCTTT 59.927 52.381 0.00 0.00 0.00 2.52
416 417 0.689623 CAACTGGTCAGCTCCCTCTT 59.310 55.000 0.00 0.00 0.00 2.85
417 418 0.178921 TCAACTGGTCAGCTCCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
433 434 4.013050 TGTTCACTTGGACACACAATCAA 58.987 39.130 0.00 0.00 0.00 2.57
438 439 3.149981 TGTTTGTTCACTTGGACACACA 58.850 40.909 5.66 5.66 0.00 3.72
448 449 3.131396 CCTCTACGCTTGTTTGTTCACT 58.869 45.455 0.00 0.00 0.00 3.41
531 532 7.220108 TCACTTTCAACGTATACAATCGATCAG 59.780 37.037 0.00 0.00 0.00 2.90
540 541 7.148540 GGCATAACTTCACTTTCAACGTATACA 60.149 37.037 3.32 0.00 0.00 2.29
614 615 3.988379 TCGTACGTAGAAGTTGTTGGT 57.012 42.857 16.05 0.00 0.00 3.67
621 622 3.002042 CCACATCGATCGTACGTAGAAGT 59.998 47.826 15.94 12.60 34.70 3.01
632 633 2.095668 GGTAGCTAGTCCACATCGATCG 60.096 54.545 9.36 9.36 0.00 3.69
707 708 2.579201 GCAGCTAGCCTTGACCGA 59.421 61.111 12.13 0.00 37.23 4.69
786 788 6.653740 GGTTTGAAGTTTAGCTGTGTAGGTAT 59.346 38.462 0.00 0.00 36.82 2.73
787 789 5.993441 GGTTTGAAGTTTAGCTGTGTAGGTA 59.007 40.000 0.00 0.00 35.90 3.08
788 790 4.820173 GGTTTGAAGTTTAGCTGTGTAGGT 59.180 41.667 0.00 0.00 38.41 3.08
789 791 4.084013 CGGTTTGAAGTTTAGCTGTGTAGG 60.084 45.833 0.00 0.00 0.00 3.18
790 792 4.084013 CCGGTTTGAAGTTTAGCTGTGTAG 60.084 45.833 0.00 0.00 0.00 2.74
791 793 3.810941 CCGGTTTGAAGTTTAGCTGTGTA 59.189 43.478 0.00 0.00 0.00 2.90
792 794 2.616842 CCGGTTTGAAGTTTAGCTGTGT 59.383 45.455 0.00 0.00 0.00 3.72
794 796 3.202829 TCCGGTTTGAAGTTTAGCTGT 57.797 42.857 0.00 0.00 0.00 4.40
855 861 0.770499 TGAAATGCAGGAGTGGGTGA 59.230 50.000 0.00 0.00 0.00 4.02
910 940 0.886043 TCAGTCAAGCGCTTGCATGT 60.886 50.000 38.89 22.47 42.66 3.21
981 1036 0.909133 TCACAGGCAGCCATGACCTA 60.909 55.000 15.80 0.00 33.44 3.08
1013 1068 1.283029 AGCTGTAGTCCCATGCATGTT 59.717 47.619 24.58 10.14 0.00 2.71
1019 1074 5.523916 GTGTATTTGTAGCTGTAGTCCCATG 59.476 44.000 0.00 0.00 0.00 3.66
1020 1075 5.396436 GGTGTATTTGTAGCTGTAGTCCCAT 60.396 44.000 0.00 0.00 0.00 4.00
1021 1076 4.081309 GGTGTATTTGTAGCTGTAGTCCCA 60.081 45.833 0.00 0.00 0.00 4.37
1022 1077 4.161754 AGGTGTATTTGTAGCTGTAGTCCC 59.838 45.833 0.00 0.00 0.00 4.46
1023 1078 5.340439 AGGTGTATTTGTAGCTGTAGTCC 57.660 43.478 0.00 0.00 0.00 3.85
1024 1079 5.105473 TGGAGGTGTATTTGTAGCTGTAGTC 60.105 44.000 0.00 0.00 0.00 2.59
1025 1080 4.775780 TGGAGGTGTATTTGTAGCTGTAGT 59.224 41.667 0.00 0.00 0.00 2.73
1026 1081 5.109903 GTGGAGGTGTATTTGTAGCTGTAG 58.890 45.833 0.00 0.00 0.00 2.74
1027 1082 4.528987 TGTGGAGGTGTATTTGTAGCTGTA 59.471 41.667 0.00 0.00 0.00 2.74
1028 1083 3.326588 TGTGGAGGTGTATTTGTAGCTGT 59.673 43.478 0.00 0.00 0.00 4.40
1029 1084 3.684788 GTGTGGAGGTGTATTTGTAGCTG 59.315 47.826 0.00 0.00 0.00 4.24
1030 1085 3.583086 AGTGTGGAGGTGTATTTGTAGCT 59.417 43.478 0.00 0.00 0.00 3.32
1031 1086 3.933332 GAGTGTGGAGGTGTATTTGTAGC 59.067 47.826 0.00 0.00 0.00 3.58
1059 1114 2.358615 GCGGAGTGGTGTGCATGA 60.359 61.111 0.00 0.00 0.00 3.07
1099 1183 0.603975 GGAATGGGAGTAGGCGATGC 60.604 60.000 0.00 0.00 0.00 3.91
1167 1251 2.183046 GAGCTGCTGGTCGGACTC 59.817 66.667 7.01 0.00 0.00 3.36
1270 1357 1.508808 TAACAAAAGGACGTGCCGGC 61.509 55.000 22.73 22.73 43.43 6.13
1395 1482 0.246910 GGTTGAGGACGGAGAGGAAC 59.753 60.000 0.00 0.00 0.00 3.62
1457 1544 7.337436 GGAGATACTTAAGACGATGTAGCCTAT 59.663 40.741 10.09 0.00 0.00 2.57
1515 1602 3.015145 TTCCCCAGGGCAGTAGGC 61.015 66.667 0.00 0.00 43.74 3.93
1819 1909 8.911918 ATTTGTAACCTAGACATGTTGTACAA 57.088 30.769 3.59 3.59 0.00 2.41
2027 2118 1.506262 GCTAACCATGTTGGCACGG 59.494 57.895 9.97 0.00 42.67 4.94
2296 2388 3.307691 CCTTGGCCAGACAACTGATTAGA 60.308 47.826 5.11 0.00 46.03 2.10
2521 2616 6.039382 GGAAGGCCACCTGTTAACTTATTATG 59.961 42.308 5.01 0.00 32.13 1.90
2711 2813 6.898041 TGGAGAAATAAATGTTGAACACTCG 58.102 36.000 0.00 0.00 0.00 4.18
3176 3296 1.141053 CGGGTATTTGGCCTTCTAGCT 59.859 52.381 3.32 0.00 0.00 3.32
3297 3420 4.161754 GGTAAGTGTATAGCAGTTGAGGGT 59.838 45.833 0.00 0.00 40.66 4.34
3410 3536 5.554822 TGGATTTAAAGACGCATTGTACC 57.445 39.130 0.00 0.00 0.00 3.34
3420 3546 6.575162 ATGACACTGGTTGGATTTAAAGAC 57.425 37.500 0.00 0.00 0.00 3.01
3748 3878 7.703621 GTGTTGTGTACTTTGAGAGTAGTGTAA 59.296 37.037 0.00 0.00 41.41 2.41
3951 4090 4.832248 TCACAGATACCATTGAGTTGTCC 58.168 43.478 0.00 0.00 0.00 4.02
3964 4103 1.139654 TCCAGGCATGCTCACAGATAC 59.860 52.381 18.92 0.00 0.00 2.24
4080 4233 6.225318 ACGTAGTTGCTCAACCTTATTGTTA 58.775 36.000 8.95 0.00 37.78 2.41
4121 4284 2.480419 CGTACTCTGCCCAAGACAAAAG 59.520 50.000 0.00 0.00 0.00 2.27
4123 4286 1.270625 CCGTACTCTGCCCAAGACAAA 60.271 52.381 0.00 0.00 0.00 2.83
4126 4289 0.606604 TTCCGTACTCTGCCCAAGAC 59.393 55.000 0.00 0.00 0.00 3.01
4292 4457 2.483188 GGCTATCGACGACCTGGAAAAT 60.483 50.000 0.00 0.00 0.00 1.82
4338 4503 1.610038 CATTGTCCAAGCTGCAGTTCA 59.390 47.619 16.64 0.04 0.00 3.18
4433 4598 2.658679 TTCAGCCTCACCACCACGTG 62.659 60.000 9.08 9.08 34.93 4.49
4446 4611 3.341823 TCAGCTTTGATCTTCTTCAGCC 58.658 45.455 0.00 0.00 0.00 4.85
4508 4673 4.577283 AGAAACTAGGTAGCTCGATCACTC 59.423 45.833 0.00 0.00 0.00 3.51
4597 4766 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4598 4767 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4599 4768 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4600 4769 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4601 4770 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4602 4771 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4603 4772 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4604 4773 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4605 4774 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4606 4775 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4607 4776 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4608 4777 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4609 4778 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4610 4779 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4611 4780 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4612 4781 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4613 4782 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4614 4783 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4615 4784 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4616 4785 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4617 4786 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4618 4787 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4619 4788 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4620 4789 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4621 4790 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4622 4791 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4623 4792 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4624 4793 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4625 4794 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
4626 4795 8.700051 TGAAGAAGAAGAAGAAGAAGAAGAAGA 58.300 33.333 0.00 0.00 0.00 2.87
4627 4796 8.885494 TGAAGAAGAAGAAGAAGAAGAAGAAG 57.115 34.615 0.00 0.00 0.00 2.85
4642 4811 6.587990 ACGTGATTACTGTGATGAAGAAGAAG 59.412 38.462 0.00 0.00 0.00 2.85
4645 4814 6.096036 AGACGTGATTACTGTGATGAAGAAG 58.904 40.000 0.00 0.00 0.00 2.85
4648 4817 5.744345 GGTAGACGTGATTACTGTGATGAAG 59.256 44.000 0.00 0.00 0.00 3.02
4692 4861 4.783227 TGCTAGAAGGACTACATTTTCCCT 59.217 41.667 0.00 0.00 31.51 4.20
4696 4865 9.686683 ATACATTTGCTAGAAGGACTACATTTT 57.313 29.630 0.00 0.00 0.00 1.82
4750 4930 5.276067 GCACAATTATAAGTGACCGACGTAC 60.276 44.000 19.08 0.00 37.97 3.67
4751 4931 4.799949 GCACAATTATAAGTGACCGACGTA 59.200 41.667 19.08 0.00 37.97 3.57
4752 4932 3.615496 GCACAATTATAAGTGACCGACGT 59.385 43.478 19.08 0.00 37.97 4.34
4753 4933 3.863424 AGCACAATTATAAGTGACCGACG 59.137 43.478 19.08 2.41 37.97 5.12
4829 5009 4.488126 TGTTTTACTGCAATCAGCTCAC 57.512 40.909 0.00 0.00 44.10 3.51
5044 5226 1.679139 CTTCAGTTGTGTGCCCTGAA 58.321 50.000 0.00 0.00 41.55 3.02
5110 5294 2.159226 ACAAAATGCGGACAAAACGGAA 60.159 40.909 0.00 0.00 34.79 4.30
5124 5308 2.286563 GCCAACCCAAACGAACAAAATG 59.713 45.455 0.00 0.00 0.00 2.32
5142 5326 0.593518 CGCACGTGTTCATTTTGCCA 60.594 50.000 18.38 0.00 0.00 4.92
5152 5336 3.785189 AAGAGCGGACGCACGTGTT 62.785 57.895 18.38 4.25 44.88 3.32
5158 5342 4.717629 CGACCAAGAGCGGACGCA 62.718 66.667 19.48 0.00 44.88 5.24
5199 5383 4.839706 ATTGGGATGCGGTGGGCC 62.840 66.667 0.00 0.00 42.61 5.80
5288 5472 6.127310 ACTGGCCTTTTGTTGTTGTTTATGTA 60.127 34.615 3.32 0.00 0.00 2.29
5290 5474 5.115480 ACTGGCCTTTTGTTGTTGTTTATG 58.885 37.500 3.32 0.00 0.00 1.90
5297 5481 1.757682 TCGACTGGCCTTTTGTTGTT 58.242 45.000 3.32 0.00 0.00 2.83
5307 5491 1.523758 AGAAATGTGTTCGACTGGCC 58.476 50.000 0.00 0.00 0.00 5.36
5389 5573 1.414897 GCGGCAACTAAAGACGACG 59.585 57.895 0.00 0.00 0.00 5.12
5398 5582 3.115892 CGAAAGCGGCGGCAACTA 61.116 61.111 19.21 0.00 43.41 2.24
5424 5608 0.034059 CCTACATCGACCTCATGGGC 59.966 60.000 0.00 0.00 39.10 5.36
5496 5680 3.474806 GCATCACGGTCACCTTCG 58.525 61.111 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.