Multiple sequence alignment - TraesCS5D01G396200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G396200 chr5D 100.000 2101 0 0 835 2935 463908296 463906196 0.000000e+00 3880.0
1 TraesCS5D01G396200 chr5D 100.000 527 0 0 1 527 463909130 463908604 0.000000e+00 974.0
2 TraesCS5D01G396200 chr5A 89.674 1288 69 30 836 2108 584046019 584044781 0.000000e+00 1583.0
3 TraesCS5D01G396200 chr5B 91.099 1146 58 22 910 2026 570581812 570580682 0.000000e+00 1511.0
4 TraesCS5D01G396200 chr5B 90.411 73 1 2 851 923 570581906 570581840 1.120000e-14 91.6
5 TraesCS5D01G396200 chr4D 96.691 816 26 1 2121 2935 62823404 62824219 0.000000e+00 1356.0
6 TraesCS5D01G396200 chr4D 96.446 816 27 2 2121 2935 204978679 204977865 0.000000e+00 1345.0
7 TraesCS5D01G396200 chr4D 96.229 822 28 3 2117 2935 88474541 88475362 0.000000e+00 1343.0
8 TraesCS5D01G396200 chr4D 92.506 814 57 4 2121 2932 309624558 309625369 0.000000e+00 1162.0
9 TraesCS5D01G396200 chr2D 95.961 817 31 2 2120 2935 255810770 255809955 0.000000e+00 1325.0
10 TraesCS5D01G396200 chr7D 96.519 747 25 1 2190 2935 244564359 244563613 0.000000e+00 1234.0
11 TraesCS5D01G396200 chr7D 92.814 821 57 2 2117 2935 182599336 182598516 0.000000e+00 1188.0
12 TraesCS5D01G396200 chr7D 88.265 392 36 4 1 388 497902714 497902329 7.410000e-126 460.0
13 TraesCS5D01G396200 chr3D 93.023 817 54 3 2121 2935 133100488 133101303 0.000000e+00 1190.0
14 TraesCS5D01G396200 chr1A 91.799 817 59 5 2121 2935 396236378 396235568 0.000000e+00 1131.0
15 TraesCS5D01G396200 chr7A 96.259 401 13 2 1 399 128842881 128842481 0.000000e+00 656.0
16 TraesCS5D01G396200 chr7A 88.346 266 24 4 1 265 634692774 634693033 2.200000e-81 313.0
17 TraesCS5D01G396200 chr6B 90.640 406 30 5 1 398 75003718 75003313 1.550000e-147 532.0
18 TraesCS5D01G396200 chr1B 89.027 401 40 3 1 398 514173407 514173008 7.310000e-136 494.0
19 TraesCS5D01G396200 chr7B 87.811 402 39 6 1 398 207901019 207901414 2.060000e-126 462.0
20 TraesCS5D01G396200 chr6D 75.978 179 43 0 7 185 353361098 353360920 3.110000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G396200 chr5D 463906196 463909130 2934 True 2427.0 3880 100.000 1 2935 2 chr5D.!!$R1 2934
1 TraesCS5D01G396200 chr5A 584044781 584046019 1238 True 1583.0 1583 89.674 836 2108 1 chr5A.!!$R1 1272
2 TraesCS5D01G396200 chr5B 570580682 570581906 1224 True 801.3 1511 90.755 851 2026 2 chr5B.!!$R1 1175
3 TraesCS5D01G396200 chr4D 62823404 62824219 815 False 1356.0 1356 96.691 2121 2935 1 chr4D.!!$F1 814
4 TraesCS5D01G396200 chr4D 204977865 204978679 814 True 1345.0 1345 96.446 2121 2935 1 chr4D.!!$R1 814
5 TraesCS5D01G396200 chr4D 88474541 88475362 821 False 1343.0 1343 96.229 2117 2935 1 chr4D.!!$F2 818
6 TraesCS5D01G396200 chr4D 309624558 309625369 811 False 1162.0 1162 92.506 2121 2932 1 chr4D.!!$F3 811
7 TraesCS5D01G396200 chr2D 255809955 255810770 815 True 1325.0 1325 95.961 2120 2935 1 chr2D.!!$R1 815
8 TraesCS5D01G396200 chr7D 244563613 244564359 746 True 1234.0 1234 96.519 2190 2935 1 chr7D.!!$R2 745
9 TraesCS5D01G396200 chr7D 182598516 182599336 820 True 1188.0 1188 92.814 2117 2935 1 chr7D.!!$R1 818
10 TraesCS5D01G396200 chr3D 133100488 133101303 815 False 1190.0 1190 93.023 2121 2935 1 chr3D.!!$F1 814
11 TraesCS5D01G396200 chr1A 396235568 396236378 810 True 1131.0 1131 91.799 2121 2935 1 chr1A.!!$R1 814

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.031585 CTTCAACCACGACGTCCTCA 59.968 55.0 10.58 0.0 0.0 3.86 F
220 221 0.034616 CCTGATCCCGAAGCTCCATC 59.965 60.0 0.00 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1155 1207 0.179073 AACGAGCGGATGAATGGAGG 60.179 55.0 0.0 0.0 0.00 4.30 R
2085 2201 0.246086 GCACCTCTCCAGTGTCTCTG 59.754 60.0 0.0 0.0 43.27 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.376918 GCCAAGTCCCAAGCAGCC 61.377 66.667 0.00 0.00 0.00 4.85
18 19 2.677875 CCAAGTCCCAAGCAGCCC 60.678 66.667 0.00 0.00 0.00 5.19
19 20 2.437897 CAAGTCCCAAGCAGCCCT 59.562 61.111 0.00 0.00 0.00 5.19
20 21 1.676967 CAAGTCCCAAGCAGCCCTC 60.677 63.158 0.00 0.00 0.00 4.30
21 22 2.156098 AAGTCCCAAGCAGCCCTCA 61.156 57.895 0.00 0.00 0.00 3.86
22 23 1.504275 AAGTCCCAAGCAGCCCTCAT 61.504 55.000 0.00 0.00 0.00 2.90
23 24 1.751927 GTCCCAAGCAGCCCTCATG 60.752 63.158 0.00 0.00 0.00 3.07
24 25 2.233566 TCCCAAGCAGCCCTCATGT 61.234 57.895 0.00 0.00 0.00 3.21
25 26 1.304713 CCCAAGCAGCCCTCATGTT 60.305 57.895 0.00 0.00 0.00 2.71
26 27 1.318158 CCCAAGCAGCCCTCATGTTC 61.318 60.000 0.00 0.00 0.00 3.18
27 28 1.318158 CCAAGCAGCCCTCATGTTCC 61.318 60.000 0.00 0.00 0.00 3.62
28 29 1.377725 AAGCAGCCCTCATGTTCCG 60.378 57.895 0.00 0.00 0.00 4.30
29 30 2.825836 GCAGCCCTCATGTTCCGG 60.826 66.667 0.00 0.00 0.00 5.14
30 31 2.989639 CAGCCCTCATGTTCCGGA 59.010 61.111 0.00 0.00 0.00 5.14
31 32 1.299648 CAGCCCTCATGTTCCGGAA 59.700 57.895 14.35 14.35 0.00 4.30
32 33 0.745845 CAGCCCTCATGTTCCGGAAG 60.746 60.000 19.50 6.33 0.00 3.46
33 34 0.909610 AGCCCTCATGTTCCGGAAGA 60.910 55.000 19.50 18.37 0.00 2.87
34 35 0.035439 GCCCTCATGTTCCGGAAGAA 60.035 55.000 19.50 9.79 0.00 2.52
56 57 4.226113 CCAGTACTGGCTATACGTCTTC 57.774 50.000 28.48 0.00 44.73 2.87
57 58 3.884091 CCAGTACTGGCTATACGTCTTCT 59.116 47.826 28.48 0.00 44.73 2.85
58 59 4.023878 CCAGTACTGGCTATACGTCTTCTC 60.024 50.000 28.48 0.00 44.73 2.87
59 60 4.023878 CAGTACTGGCTATACGTCTTCTCC 60.024 50.000 15.49 0.00 0.00 3.71
60 61 1.948145 ACTGGCTATACGTCTTCTCCG 59.052 52.381 0.00 0.00 0.00 4.63
61 62 1.948145 CTGGCTATACGTCTTCTCCGT 59.052 52.381 0.00 0.00 42.06 4.69
62 63 1.674441 TGGCTATACGTCTTCTCCGTG 59.326 52.381 0.00 0.00 39.22 4.94
63 64 1.674962 GGCTATACGTCTTCTCCGTGT 59.325 52.381 0.00 0.00 39.22 4.49
64 65 2.541178 GGCTATACGTCTTCTCCGTGTG 60.541 54.545 0.00 0.00 39.22 3.82
65 66 2.353889 GCTATACGTCTTCTCCGTGTGA 59.646 50.000 0.00 0.00 39.22 3.58
66 67 3.181503 GCTATACGTCTTCTCCGTGTGAA 60.182 47.826 0.00 0.00 39.22 3.18
67 68 2.693797 TACGTCTTCTCCGTGTGAAC 57.306 50.000 0.00 0.00 39.22 3.18
68 69 0.031721 ACGTCTTCTCCGTGTGAACC 59.968 55.000 0.00 0.00 37.12 3.62
69 70 0.666577 CGTCTTCTCCGTGTGAACCC 60.667 60.000 0.00 0.00 0.00 4.11
70 71 0.680061 GTCTTCTCCGTGTGAACCCT 59.320 55.000 0.00 0.00 0.00 4.34
71 72 1.891150 GTCTTCTCCGTGTGAACCCTA 59.109 52.381 0.00 0.00 0.00 3.53
72 73 2.094649 GTCTTCTCCGTGTGAACCCTAG 60.095 54.545 0.00 0.00 0.00 3.02
73 74 0.606604 TTCTCCGTGTGAACCCTAGC 59.393 55.000 0.00 0.00 0.00 3.42
74 75 0.541063 TCTCCGTGTGAACCCTAGCA 60.541 55.000 0.00 0.00 0.00 3.49
75 76 0.320374 CTCCGTGTGAACCCTAGCAA 59.680 55.000 0.00 0.00 0.00 3.91
76 77 0.981183 TCCGTGTGAACCCTAGCAAT 59.019 50.000 0.00 0.00 0.00 3.56
77 78 1.086696 CCGTGTGAACCCTAGCAATG 58.913 55.000 0.00 0.00 0.00 2.82
78 79 1.086696 CGTGTGAACCCTAGCAATGG 58.913 55.000 0.00 0.00 0.00 3.16
79 80 0.811281 GTGTGAACCCTAGCAATGGC 59.189 55.000 0.00 0.00 41.61 4.40
80 81 0.323360 TGTGAACCCTAGCAATGGCC 60.323 55.000 0.00 0.00 42.56 5.36
81 82 0.323360 GTGAACCCTAGCAATGGCCA 60.323 55.000 8.56 8.56 42.56 5.36
82 83 0.630673 TGAACCCTAGCAATGGCCAT 59.369 50.000 14.09 14.09 42.56 4.40
83 84 1.322442 GAACCCTAGCAATGGCCATC 58.678 55.000 21.08 7.62 42.56 3.51
84 85 0.106015 AACCCTAGCAATGGCCATCC 60.106 55.000 21.08 13.45 42.56 3.51
93 94 3.142162 TGGCCATCCAGCGCATTG 61.142 61.111 11.47 0.00 37.47 2.82
94 95 4.580551 GGCCATCCAGCGCATTGC 62.581 66.667 11.47 1.41 46.98 3.56
106 107 3.204827 CATTGCCTCCGCCGGAAG 61.205 66.667 7.50 1.17 0.00 3.46
112 113 4.214327 CTCCGCCGGAAGCTCCTC 62.214 72.222 7.50 0.00 40.39 3.71
114 115 3.854669 CCGCCGGAAGCTCCTCAT 61.855 66.667 5.05 0.00 40.39 2.90
115 116 2.279784 CGCCGGAAGCTCCTCATC 60.280 66.667 5.05 0.00 40.39 2.92
116 117 2.790791 CGCCGGAAGCTCCTCATCT 61.791 63.158 5.05 0.00 40.39 2.90
117 118 1.524482 GCCGGAAGCTCCTCATCTT 59.476 57.895 5.05 0.00 38.99 2.40
118 119 0.531753 GCCGGAAGCTCCTCATCTTC 60.532 60.000 5.05 0.00 38.99 2.87
119 120 0.826715 CCGGAAGCTCCTCATCTTCA 59.173 55.000 0.00 0.00 40.20 3.02
120 121 1.208052 CCGGAAGCTCCTCATCTTCAA 59.792 52.381 0.00 0.00 40.20 2.69
121 122 2.275318 CGGAAGCTCCTCATCTTCAAC 58.725 52.381 0.00 0.00 40.20 3.18
122 123 2.637947 GGAAGCTCCTCATCTTCAACC 58.362 52.381 0.00 0.00 40.20 3.77
123 124 2.026822 GGAAGCTCCTCATCTTCAACCA 60.027 50.000 0.00 0.00 40.20 3.67
124 125 2.777832 AGCTCCTCATCTTCAACCAC 57.222 50.000 0.00 0.00 0.00 4.16
125 126 1.066573 AGCTCCTCATCTTCAACCACG 60.067 52.381 0.00 0.00 0.00 4.94
126 127 1.066858 GCTCCTCATCTTCAACCACGA 60.067 52.381 0.00 0.00 0.00 4.35
127 128 2.611518 CTCCTCATCTTCAACCACGAC 58.388 52.381 0.00 0.00 0.00 4.34
128 129 1.067846 TCCTCATCTTCAACCACGACG 60.068 52.381 0.00 0.00 0.00 5.12
129 130 1.336887 CCTCATCTTCAACCACGACGT 60.337 52.381 0.00 0.00 0.00 4.34
130 131 1.986378 CTCATCTTCAACCACGACGTC 59.014 52.381 5.18 5.18 0.00 4.34
131 132 1.068474 CATCTTCAACCACGACGTCC 58.932 55.000 10.58 0.00 0.00 4.79
132 133 0.966920 ATCTTCAACCACGACGTCCT 59.033 50.000 10.58 0.00 0.00 3.85
133 134 0.313043 TCTTCAACCACGACGTCCTC 59.687 55.000 10.58 0.00 0.00 3.71
134 135 0.031585 CTTCAACCACGACGTCCTCA 59.968 55.000 10.58 0.00 0.00 3.86
135 136 0.460722 TTCAACCACGACGTCCTCAA 59.539 50.000 10.58 0.00 0.00 3.02
136 137 0.031585 TCAACCACGACGTCCTCAAG 59.968 55.000 10.58 0.00 0.00 3.02
137 138 0.031585 CAACCACGACGTCCTCAAGA 59.968 55.000 10.58 0.00 0.00 3.02
138 139 0.966920 AACCACGACGTCCTCAAGAT 59.033 50.000 10.58 0.00 0.00 2.40
139 140 0.526662 ACCACGACGTCCTCAAGATC 59.473 55.000 10.58 0.00 0.00 2.75
140 141 0.523546 CCACGACGTCCTCAAGATCG 60.524 60.000 10.58 0.00 38.71 3.69
141 142 0.168348 CACGACGTCCTCAAGATCGT 59.832 55.000 10.58 0.00 46.28 3.73
142 143 0.447011 ACGACGTCCTCAAGATCGTC 59.553 55.000 10.58 13.03 41.96 4.20
143 144 0.727970 CGACGTCCTCAAGATCGTCT 59.272 55.000 10.58 0.00 42.13 4.18
144 145 1.130749 CGACGTCCTCAAGATCGTCTT 59.869 52.381 10.58 0.00 42.13 3.01
145 146 2.788030 GACGTCCTCAAGATCGTCTTC 58.212 52.381 3.51 0.00 41.60 2.87
146 147 2.420722 GACGTCCTCAAGATCGTCTTCT 59.579 50.000 3.51 0.00 41.60 2.85
147 148 2.820787 ACGTCCTCAAGATCGTCTTCTT 59.179 45.455 0.00 0.00 33.78 2.52
148 149 3.256136 ACGTCCTCAAGATCGTCTTCTTT 59.744 43.478 0.00 0.00 33.78 2.52
149 150 3.854809 CGTCCTCAAGATCGTCTTCTTTC 59.145 47.826 0.00 0.00 33.78 2.62
150 151 4.616143 CGTCCTCAAGATCGTCTTCTTTCA 60.616 45.833 0.00 0.00 33.78 2.69
151 152 5.230942 GTCCTCAAGATCGTCTTCTTTCAA 58.769 41.667 0.00 0.00 33.78 2.69
152 153 5.347364 GTCCTCAAGATCGTCTTCTTTCAAG 59.653 44.000 0.00 0.00 33.78 3.02
153 154 4.092675 CCTCAAGATCGTCTTCTTTCAAGC 59.907 45.833 0.00 0.00 33.78 4.01
154 155 3.997021 TCAAGATCGTCTTCTTTCAAGCC 59.003 43.478 0.00 0.00 33.78 4.35
155 156 2.611518 AGATCGTCTTCTTTCAAGCCG 58.388 47.619 0.00 0.00 0.00 5.52
156 157 2.231478 AGATCGTCTTCTTTCAAGCCGA 59.769 45.455 0.00 0.00 0.00 5.54
157 158 2.065993 TCGTCTTCTTTCAAGCCGAG 57.934 50.000 0.00 0.00 0.00 4.63
158 159 1.340248 TCGTCTTCTTTCAAGCCGAGT 59.660 47.619 0.00 0.00 0.00 4.18
159 160 2.135933 CGTCTTCTTTCAAGCCGAGTT 58.864 47.619 0.00 0.00 0.00 3.01
160 161 2.155924 CGTCTTCTTTCAAGCCGAGTTC 59.844 50.000 0.00 0.00 0.00 3.01
161 162 3.394719 GTCTTCTTTCAAGCCGAGTTCT 58.605 45.455 0.00 0.00 0.00 3.01
162 163 3.810386 GTCTTCTTTCAAGCCGAGTTCTT 59.190 43.478 0.00 0.00 0.00 2.52
163 164 4.058817 TCTTCTTTCAAGCCGAGTTCTTC 58.941 43.478 0.00 0.00 0.00 2.87
164 165 2.767505 TCTTTCAAGCCGAGTTCTTCC 58.232 47.619 0.00 0.00 0.00 3.46
165 166 2.104111 TCTTTCAAGCCGAGTTCTTCCA 59.896 45.455 0.00 0.00 0.00 3.53
166 167 2.859165 TTCAAGCCGAGTTCTTCCAT 57.141 45.000 0.00 0.00 0.00 3.41
167 168 2.386661 TCAAGCCGAGTTCTTCCATC 57.613 50.000 0.00 0.00 0.00 3.51
168 169 1.623311 TCAAGCCGAGTTCTTCCATCA 59.377 47.619 0.00 0.00 0.00 3.07
169 170 2.237143 TCAAGCCGAGTTCTTCCATCAT 59.763 45.455 0.00 0.00 0.00 2.45
170 171 3.012518 CAAGCCGAGTTCTTCCATCATT 58.987 45.455 0.00 0.00 0.00 2.57
171 172 2.636830 AGCCGAGTTCTTCCATCATTG 58.363 47.619 0.00 0.00 0.00 2.82
172 173 1.064654 GCCGAGTTCTTCCATCATTGC 59.935 52.381 0.00 0.00 0.00 3.56
173 174 1.672881 CCGAGTTCTTCCATCATTGCC 59.327 52.381 0.00 0.00 0.00 4.52
174 175 2.636830 CGAGTTCTTCCATCATTGCCT 58.363 47.619 0.00 0.00 0.00 4.75
175 176 2.611292 CGAGTTCTTCCATCATTGCCTC 59.389 50.000 0.00 0.00 0.00 4.70
176 177 2.948315 GAGTTCTTCCATCATTGCCTCC 59.052 50.000 0.00 0.00 0.00 4.30
177 178 2.309755 AGTTCTTCCATCATTGCCTCCA 59.690 45.455 0.00 0.00 0.00 3.86
178 179 2.686915 GTTCTTCCATCATTGCCTCCAG 59.313 50.000 0.00 0.00 0.00 3.86
179 180 2.199208 TCTTCCATCATTGCCTCCAGA 58.801 47.619 0.00 0.00 0.00 3.86
180 181 2.781757 TCTTCCATCATTGCCTCCAGAT 59.218 45.455 0.00 0.00 0.00 2.90
181 182 2.945080 TCCATCATTGCCTCCAGATC 57.055 50.000 0.00 0.00 0.00 2.75
182 183 1.071228 TCCATCATTGCCTCCAGATCG 59.929 52.381 0.00 0.00 0.00 3.69
183 184 1.520494 CATCATTGCCTCCAGATCGG 58.480 55.000 0.00 0.00 0.00 4.18
184 185 1.071228 CATCATTGCCTCCAGATCGGA 59.929 52.381 6.21 6.21 43.61 4.55
206 207 4.241555 GGCGTGCCCGATCCTGAT 62.242 66.667 0.00 0.00 35.63 2.90
207 208 2.663188 GCGTGCCCGATCCTGATC 60.663 66.667 0.00 0.00 35.63 2.92
208 209 2.029666 CGTGCCCGATCCTGATCC 59.970 66.667 1.69 0.00 34.40 3.36
209 210 2.427753 GTGCCCGATCCTGATCCC 59.572 66.667 1.69 0.00 34.40 3.85
210 211 3.233980 TGCCCGATCCTGATCCCG 61.234 66.667 1.69 0.00 34.40 5.14
211 212 2.917751 GCCCGATCCTGATCCCGA 60.918 66.667 1.69 0.00 34.40 5.14
212 213 2.507854 GCCCGATCCTGATCCCGAA 61.508 63.158 1.69 0.00 34.40 4.30
213 214 1.668294 CCCGATCCTGATCCCGAAG 59.332 63.158 1.69 0.00 34.40 3.79
214 215 1.005630 CCGATCCTGATCCCGAAGC 60.006 63.158 1.69 0.00 34.40 3.86
215 216 1.467678 CCGATCCTGATCCCGAAGCT 61.468 60.000 1.69 0.00 34.40 3.74
216 217 0.038709 CGATCCTGATCCCGAAGCTC 60.039 60.000 1.69 0.00 34.40 4.09
217 218 0.320050 GATCCTGATCCCGAAGCTCC 59.680 60.000 0.00 0.00 31.76 4.70
218 219 0.399091 ATCCTGATCCCGAAGCTCCA 60.399 55.000 0.00 0.00 0.00 3.86
219 220 0.399091 TCCTGATCCCGAAGCTCCAT 60.399 55.000 0.00 0.00 0.00 3.41
220 221 0.034616 CCTGATCCCGAAGCTCCATC 59.965 60.000 0.00 0.00 0.00 3.51
221 222 0.755079 CTGATCCCGAAGCTCCATCA 59.245 55.000 0.00 0.00 0.00 3.07
222 223 1.347050 CTGATCCCGAAGCTCCATCAT 59.653 52.381 0.00 0.00 0.00 2.45
223 224 1.345741 TGATCCCGAAGCTCCATCATC 59.654 52.381 0.00 0.00 0.00 2.92
224 225 0.689623 ATCCCGAAGCTCCATCATCC 59.310 55.000 0.00 0.00 0.00 3.51
225 226 0.690744 TCCCGAAGCTCCATCATCCA 60.691 55.000 0.00 0.00 0.00 3.41
226 227 0.399454 CCCGAAGCTCCATCATCCAT 59.601 55.000 0.00 0.00 0.00 3.41
227 228 1.610102 CCCGAAGCTCCATCATCCATC 60.610 57.143 0.00 0.00 0.00 3.51
228 229 1.426423 CGAAGCTCCATCATCCATCG 58.574 55.000 0.00 0.00 0.00 3.84
229 230 1.000171 CGAAGCTCCATCATCCATCGA 60.000 52.381 0.00 0.00 0.00 3.59
230 231 2.353505 CGAAGCTCCATCATCCATCGAT 60.354 50.000 0.00 0.00 0.00 3.59
231 232 3.260740 GAAGCTCCATCATCCATCGATC 58.739 50.000 0.00 0.00 0.00 3.69
232 233 2.538222 AGCTCCATCATCCATCGATCT 58.462 47.619 0.00 0.00 0.00 2.75
233 234 2.905085 AGCTCCATCATCCATCGATCTT 59.095 45.455 0.00 0.00 0.00 2.40
234 235 3.327172 AGCTCCATCATCCATCGATCTTT 59.673 43.478 0.00 0.00 0.00 2.52
235 236 3.436015 GCTCCATCATCCATCGATCTTTG 59.564 47.826 0.00 0.00 0.00 2.77
236 237 3.405831 TCCATCATCCATCGATCTTTGC 58.594 45.455 0.00 0.00 0.00 3.68
237 238 3.072038 TCCATCATCCATCGATCTTTGCT 59.928 43.478 0.00 0.00 0.00 3.91
238 239 3.436015 CCATCATCCATCGATCTTTGCTC 59.564 47.826 0.00 0.00 0.00 4.26
239 240 2.747436 TCATCCATCGATCTTTGCTCG 58.253 47.619 0.00 0.00 37.47 5.03
245 246 2.743636 TCGATCTTTGCTCGAGGTTT 57.256 45.000 15.58 0.00 40.01 3.27
246 247 2.607187 TCGATCTTTGCTCGAGGTTTC 58.393 47.619 15.58 0.00 40.01 2.78
247 248 2.231478 TCGATCTTTGCTCGAGGTTTCT 59.769 45.455 15.58 0.00 40.01 2.52
248 249 2.346847 CGATCTTTGCTCGAGGTTTCTG 59.653 50.000 15.58 0.00 38.38 3.02
249 250 2.910688 TCTTTGCTCGAGGTTTCTGT 57.089 45.000 15.58 0.00 0.00 3.41
250 251 3.194005 TCTTTGCTCGAGGTTTCTGTT 57.806 42.857 15.58 0.00 0.00 3.16
251 252 3.131396 TCTTTGCTCGAGGTTTCTGTTC 58.869 45.455 15.58 0.00 0.00 3.18
252 253 1.878953 TTGCTCGAGGTTTCTGTTCC 58.121 50.000 15.58 0.00 0.00 3.62
253 254 0.319555 TGCTCGAGGTTTCTGTTCCG 60.320 55.000 15.58 0.00 0.00 4.30
254 255 1.627550 GCTCGAGGTTTCTGTTCCGC 61.628 60.000 15.58 0.00 0.00 5.54
255 256 1.344942 CTCGAGGTTTCTGTTCCGCG 61.345 60.000 3.91 0.00 45.48 6.46
256 257 1.372499 CGAGGTTTCTGTTCCGCGA 60.372 57.895 8.23 0.00 46.63 5.87
257 258 1.344942 CGAGGTTTCTGTTCCGCGAG 61.345 60.000 8.23 0.00 46.63 5.03
258 259 1.627550 GAGGTTTCTGTTCCGCGAGC 61.628 60.000 8.23 0.00 0.00 5.03
259 260 2.470286 GTTTCTGTTCCGCGAGCG 59.530 61.111 8.23 10.86 39.44 5.03
269 270 4.849329 CGCGAGCGGTAGTGTCCC 62.849 72.222 9.90 0.00 35.56 4.46
270 271 3.450115 GCGAGCGGTAGTGTCCCT 61.450 66.667 0.00 0.00 0.00 4.20
271 272 2.117156 GCGAGCGGTAGTGTCCCTA 61.117 63.158 0.00 0.00 0.00 3.53
272 273 1.660560 GCGAGCGGTAGTGTCCCTAA 61.661 60.000 0.00 0.00 0.00 2.69
273 274 0.381089 CGAGCGGTAGTGTCCCTAAG 59.619 60.000 0.00 0.00 0.00 2.18
274 275 0.745468 GAGCGGTAGTGTCCCTAAGG 59.255 60.000 0.00 0.00 0.00 2.69
275 276 1.143401 GCGGTAGTGTCCCTAAGGC 59.857 63.158 0.00 0.00 0.00 4.35
276 277 1.821258 CGGTAGTGTCCCTAAGGCC 59.179 63.158 0.00 0.00 0.00 5.19
277 278 1.683418 CGGTAGTGTCCCTAAGGCCC 61.683 65.000 0.00 0.00 0.00 5.80
278 279 0.326332 GGTAGTGTCCCTAAGGCCCT 60.326 60.000 0.00 0.00 0.00 5.19
279 280 1.121378 GTAGTGTCCCTAAGGCCCTC 58.879 60.000 0.00 0.00 0.00 4.30
280 281 0.396695 TAGTGTCCCTAAGGCCCTCG 60.397 60.000 0.00 0.00 0.00 4.63
281 282 1.684734 GTGTCCCTAAGGCCCTCGA 60.685 63.158 0.00 0.00 0.00 4.04
282 283 1.684734 TGTCCCTAAGGCCCTCGAC 60.685 63.158 0.00 0.00 0.00 4.20
283 284 2.042230 TCCCTAAGGCCCTCGACC 60.042 66.667 0.00 0.00 0.00 4.79
284 285 3.162154 CCCTAAGGCCCTCGACCC 61.162 72.222 0.00 0.00 0.00 4.46
285 286 3.162154 CCTAAGGCCCTCGACCCC 61.162 72.222 0.00 0.00 0.00 4.95
286 287 3.162154 CTAAGGCCCTCGACCCCC 61.162 72.222 0.00 0.00 0.00 5.40
320 321 3.291383 CGCTAGCGGGGAGAGGAG 61.291 72.222 29.29 0.00 35.56 3.69
321 322 2.915137 GCTAGCGGGGAGAGGAGG 60.915 72.222 0.00 0.00 0.00 4.30
322 323 2.203567 CTAGCGGGGAGAGGAGGG 60.204 72.222 0.00 0.00 0.00 4.30
323 324 3.819016 CTAGCGGGGAGAGGAGGGG 62.819 73.684 0.00 0.00 0.00 4.79
326 327 4.548513 CGGGGAGAGGAGGGGAGG 62.549 77.778 0.00 0.00 0.00 4.30
327 328 4.179599 GGGGAGAGGAGGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
328 329 4.179599 GGGAGAGGAGGGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
329 330 3.036959 GGAGAGGAGGGGAGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
330 331 2.612251 GAGAGGAGGGGAGGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
331 332 2.015726 GAGAGGAGGGGAGGGGAGA 61.016 68.421 0.00 0.00 0.00 3.71
332 333 1.311371 AGAGGAGGGGAGGGGAGAT 60.311 63.158 0.00 0.00 0.00 2.75
333 334 0.938926 AGAGGAGGGGAGGGGAGATT 60.939 60.000 0.00 0.00 0.00 2.40
334 335 0.766288 GAGGAGGGGAGGGGAGATTG 60.766 65.000 0.00 0.00 0.00 2.67
335 336 1.772156 GGAGGGGAGGGGAGATTGG 60.772 68.421 0.00 0.00 0.00 3.16
336 337 1.004891 GAGGGGAGGGGAGATTGGT 59.995 63.158 0.00 0.00 0.00 3.67
337 338 0.624795 GAGGGGAGGGGAGATTGGTT 60.625 60.000 0.00 0.00 0.00 3.67
338 339 0.624795 AGGGGAGGGGAGATTGGTTC 60.625 60.000 0.00 0.00 0.00 3.62
339 340 0.624795 GGGGAGGGGAGATTGGTTCT 60.625 60.000 0.00 0.00 37.41 3.01
348 349 3.166489 GAGATTGGTTCTCTACGTGGG 57.834 52.381 0.00 0.00 46.33 4.61
349 350 1.831736 AGATTGGTTCTCTACGTGGGG 59.168 52.381 0.00 0.00 0.00 4.96
350 351 0.252197 ATTGGTTCTCTACGTGGGGC 59.748 55.000 0.00 0.00 0.00 5.80
352 353 2.345760 GGTTCTCTACGTGGGGCGA 61.346 63.158 0.00 0.00 44.77 5.54
353 354 1.588082 GTTCTCTACGTGGGGCGAA 59.412 57.895 0.00 0.00 44.77 4.70
354 355 0.037975 GTTCTCTACGTGGGGCGAAA 60.038 55.000 0.00 0.00 44.77 3.46
355 356 0.245539 TTCTCTACGTGGGGCGAAAG 59.754 55.000 0.00 0.00 44.77 2.62
356 357 0.896940 TCTCTACGTGGGGCGAAAGT 60.897 55.000 0.00 0.00 44.77 2.66
357 358 0.458025 CTCTACGTGGGGCGAAAGTC 60.458 60.000 0.00 0.00 44.77 3.01
358 359 1.804326 CTACGTGGGGCGAAAGTCG 60.804 63.158 0.00 0.00 44.77 4.18
384 385 2.823628 CGAGAGGAACGTGAAACCC 58.176 57.895 0.00 0.00 0.00 4.11
385 386 0.317479 CGAGAGGAACGTGAAACCCT 59.683 55.000 0.00 0.00 0.00 4.34
386 387 1.542915 CGAGAGGAACGTGAAACCCTA 59.457 52.381 0.00 0.00 0.00 3.53
387 388 2.029649 CGAGAGGAACGTGAAACCCTAA 60.030 50.000 0.00 0.00 0.00 2.69
388 389 3.324117 GAGAGGAACGTGAAACCCTAAC 58.676 50.000 0.00 0.00 0.00 2.34
389 390 2.064014 GAGGAACGTGAAACCCTAACG 58.936 52.381 0.00 0.00 42.82 3.18
390 391 1.688197 AGGAACGTGAAACCCTAACGA 59.312 47.619 0.97 0.00 39.64 3.85
391 392 2.064014 GGAACGTGAAACCCTAACGAG 58.936 52.381 0.97 0.00 39.64 4.18
392 393 2.288395 GGAACGTGAAACCCTAACGAGA 60.288 50.000 0.97 0.00 39.64 4.04
393 394 2.719426 ACGTGAAACCCTAACGAGAG 57.281 50.000 0.97 0.00 39.64 3.20
394 395 1.271656 ACGTGAAACCCTAACGAGAGG 59.728 52.381 0.97 0.00 39.64 3.69
403 404 3.797451 CCTAACGAGAGGGGAACTTAC 57.203 52.381 0.00 0.00 32.39 2.34
404 405 2.098770 CCTAACGAGAGGGGAACTTACG 59.901 54.545 0.00 0.00 35.36 3.18
405 406 1.625511 AACGAGAGGGGAACTTACGT 58.374 50.000 0.00 0.00 40.76 3.57
406 407 2.496899 ACGAGAGGGGAACTTACGTA 57.503 50.000 0.00 0.00 38.64 3.57
407 408 2.087646 ACGAGAGGGGAACTTACGTAC 58.912 52.381 0.00 0.00 38.64 3.67
408 409 1.063174 CGAGAGGGGAACTTACGTACG 59.937 57.143 15.01 15.01 0.00 3.67
409 410 2.087646 GAGAGGGGAACTTACGTACGT 58.912 52.381 25.98 25.98 0.00 3.57
410 411 2.489722 GAGAGGGGAACTTACGTACGTT 59.510 50.000 27.92 16.40 0.00 3.99
411 412 2.229784 AGAGGGGAACTTACGTACGTTG 59.770 50.000 27.92 20.88 0.00 4.10
412 413 1.963515 AGGGGAACTTACGTACGTTGT 59.036 47.619 27.92 21.53 0.00 3.32
413 414 2.029918 AGGGGAACTTACGTACGTTGTC 60.030 50.000 27.92 17.11 0.00 3.18
414 415 2.288152 GGGGAACTTACGTACGTTGTCA 60.288 50.000 27.92 5.17 0.00 3.58
415 416 2.726241 GGGAACTTACGTACGTTGTCAC 59.274 50.000 27.92 19.52 0.00 3.67
416 417 3.371168 GGAACTTACGTACGTTGTCACA 58.629 45.455 27.92 3.86 0.00 3.58
417 418 3.180387 GGAACTTACGTACGTTGTCACAC 59.820 47.826 27.92 15.54 0.00 3.82
418 419 2.375110 ACTTACGTACGTTGTCACACG 58.625 47.619 27.92 7.39 46.04 4.49
433 434 4.713824 TCACACGTAGTTTGATCCCTAG 57.286 45.455 0.00 0.00 42.74 3.02
434 435 4.084287 TCACACGTAGTTTGATCCCTAGT 58.916 43.478 0.00 0.00 42.74 2.57
435 436 4.082408 TCACACGTAGTTTGATCCCTAGTG 60.082 45.833 0.00 0.00 42.74 2.74
436 437 3.194968 ACACGTAGTTTGATCCCTAGTGG 59.805 47.826 0.00 0.00 41.61 4.00
437 438 3.194968 CACGTAGTTTGATCCCTAGTGGT 59.805 47.826 0.00 0.00 41.61 4.16
438 439 3.836562 ACGTAGTTTGATCCCTAGTGGTT 59.163 43.478 0.00 0.00 37.78 3.67
439 440 4.081807 ACGTAGTTTGATCCCTAGTGGTTC 60.082 45.833 0.00 0.00 37.78 3.62
440 441 4.679905 CGTAGTTTGATCCCTAGTGGTTCC 60.680 50.000 0.00 0.00 32.62 3.62
441 442 2.576648 AGTTTGATCCCTAGTGGTTCCC 59.423 50.000 0.00 0.00 32.62 3.97
442 443 2.307686 GTTTGATCCCTAGTGGTTCCCA 59.692 50.000 0.00 0.00 32.62 4.37
443 444 2.352561 TGATCCCTAGTGGTTCCCAA 57.647 50.000 0.00 0.00 34.18 4.12
444 445 2.638325 TGATCCCTAGTGGTTCCCAAA 58.362 47.619 0.00 0.00 34.18 3.28
445 446 2.576191 TGATCCCTAGTGGTTCCCAAAG 59.424 50.000 0.00 0.00 34.18 2.77
446 447 2.426431 TCCCTAGTGGTTCCCAAAGA 57.574 50.000 0.00 0.00 34.18 2.52
447 448 2.708759 TCCCTAGTGGTTCCCAAAGAA 58.291 47.619 0.00 0.00 34.18 2.52
448 449 3.057586 TCCCTAGTGGTTCCCAAAGAAA 58.942 45.455 0.00 0.00 35.85 2.52
449 450 3.464080 TCCCTAGTGGTTCCCAAAGAAAA 59.536 43.478 0.00 0.00 35.85 2.29
450 451 4.079096 TCCCTAGTGGTTCCCAAAGAAAAA 60.079 41.667 0.00 0.00 35.85 1.94
451 452 4.838423 CCCTAGTGGTTCCCAAAGAAAAAT 59.162 41.667 0.00 0.00 35.85 1.82
452 453 5.279456 CCCTAGTGGTTCCCAAAGAAAAATG 60.279 44.000 0.00 0.00 35.85 2.32
453 454 5.538433 CCTAGTGGTTCCCAAAGAAAAATGA 59.462 40.000 0.00 0.00 35.85 2.57
454 455 5.948742 AGTGGTTCCCAAAGAAAAATGAA 57.051 34.783 0.00 0.00 35.85 2.57
455 456 6.306643 AGTGGTTCCCAAAGAAAAATGAAA 57.693 33.333 0.00 0.00 35.85 2.69
456 457 6.112734 AGTGGTTCCCAAAGAAAAATGAAAC 58.887 36.000 0.00 0.00 35.85 2.78
457 458 5.295787 GTGGTTCCCAAAGAAAAATGAAACC 59.704 40.000 0.00 0.00 35.85 3.27
458 459 4.509970 GGTTCCCAAAGAAAAATGAAACCG 59.490 41.667 0.00 0.00 35.85 4.44
459 460 5.353111 GTTCCCAAAGAAAAATGAAACCGA 58.647 37.500 0.00 0.00 35.85 4.69
460 461 5.599999 TCCCAAAGAAAAATGAAACCGAA 57.400 34.783 0.00 0.00 0.00 4.30
461 462 5.978814 TCCCAAAGAAAAATGAAACCGAAA 58.021 33.333 0.00 0.00 0.00 3.46
462 463 5.813157 TCCCAAAGAAAAATGAAACCGAAAC 59.187 36.000 0.00 0.00 0.00 2.78
463 464 5.815222 CCCAAAGAAAAATGAAACCGAAACT 59.185 36.000 0.00 0.00 0.00 2.66
464 465 6.238076 CCCAAAGAAAAATGAAACCGAAACTG 60.238 38.462 0.00 0.00 0.00 3.16
465 466 5.966636 AAGAAAAATGAAACCGAAACTGC 57.033 34.783 0.00 0.00 0.00 4.40
466 467 5.004922 AGAAAAATGAAACCGAAACTGCA 57.995 34.783 0.00 0.00 0.00 4.41
467 468 4.803613 AGAAAAATGAAACCGAAACTGCAC 59.196 37.500 0.00 0.00 0.00 4.57
468 469 2.399396 AATGAAACCGAAACTGCACG 57.601 45.000 0.00 0.00 0.00 5.34
469 470 0.040425 ATGAAACCGAAACTGCACGC 60.040 50.000 0.00 0.00 0.00 5.34
470 471 1.370051 GAAACCGAAACTGCACGCC 60.370 57.895 0.00 0.00 0.00 5.68
471 472 1.782028 GAAACCGAAACTGCACGCCT 61.782 55.000 0.00 0.00 0.00 5.52
472 473 1.381165 AAACCGAAACTGCACGCCTT 61.381 50.000 0.00 0.00 0.00 4.35
473 474 2.058829 AACCGAAACTGCACGCCTTG 62.059 55.000 0.00 0.00 0.00 3.61
474 475 2.250939 CCGAAACTGCACGCCTTGA 61.251 57.895 0.00 0.00 0.00 3.02
475 476 1.577328 CCGAAACTGCACGCCTTGAT 61.577 55.000 0.00 0.00 0.00 2.57
476 477 0.453282 CGAAACTGCACGCCTTGATG 60.453 55.000 0.00 0.00 0.00 3.07
477 478 0.730494 GAAACTGCACGCCTTGATGC 60.730 55.000 0.00 0.00 42.40 3.91
480 481 4.633769 TGCACGCCTTGATGCATA 57.366 50.000 0.00 0.00 46.63 3.14
481 482 3.099002 TGCACGCCTTGATGCATAT 57.901 47.368 0.00 0.00 46.63 1.78
482 483 2.252976 TGCACGCCTTGATGCATATA 57.747 45.000 0.00 0.00 46.63 0.86
483 484 2.570135 TGCACGCCTTGATGCATATAA 58.430 42.857 0.00 0.00 46.63 0.98
484 485 2.948315 TGCACGCCTTGATGCATATAAA 59.052 40.909 0.00 0.00 46.63 1.40
485 486 3.569277 TGCACGCCTTGATGCATATAAAT 59.431 39.130 0.00 0.00 46.63 1.40
486 487 4.161333 GCACGCCTTGATGCATATAAATC 58.839 43.478 0.00 0.00 41.65 2.17
487 488 4.083110 GCACGCCTTGATGCATATAAATCT 60.083 41.667 0.00 0.00 41.65 2.40
488 489 5.122239 GCACGCCTTGATGCATATAAATCTA 59.878 40.000 0.00 0.00 41.65 1.98
489 490 6.537566 CACGCCTTGATGCATATAAATCTAC 58.462 40.000 0.00 0.00 0.00 2.59
490 491 6.369890 CACGCCTTGATGCATATAAATCTACT 59.630 38.462 0.00 0.00 0.00 2.57
491 492 6.369890 ACGCCTTGATGCATATAAATCTACTG 59.630 38.462 0.00 0.00 0.00 2.74
492 493 6.369890 CGCCTTGATGCATATAAATCTACTGT 59.630 38.462 0.00 0.00 0.00 3.55
493 494 7.545615 CGCCTTGATGCATATAAATCTACTGTA 59.454 37.037 0.00 0.00 0.00 2.74
494 495 9.388506 GCCTTGATGCATATAAATCTACTGTAT 57.611 33.333 0.00 0.00 0.00 2.29
497 498 8.722480 TGATGCATATAAATCTACTGTATGCC 57.278 34.615 0.00 0.86 44.20 4.40
498 499 8.542926 TGATGCATATAAATCTACTGTATGCCT 58.457 33.333 0.00 3.83 44.20 4.75
499 500 8.954950 ATGCATATAAATCTACTGTATGCCTC 57.045 34.615 0.00 0.00 44.20 4.70
500 501 8.138928 TGCATATAAATCTACTGTATGCCTCT 57.861 34.615 11.69 0.00 44.20 3.69
501 502 8.597167 TGCATATAAATCTACTGTATGCCTCTT 58.403 33.333 11.69 0.00 44.20 2.85
502 503 9.092876 GCATATAAATCTACTGTATGCCTCTTC 57.907 37.037 4.73 0.00 40.89 2.87
505 506 5.799827 AATCTACTGTATGCCTCTTCTCC 57.200 43.478 0.00 0.00 0.00 3.71
506 507 3.567397 TCTACTGTATGCCTCTTCTCCC 58.433 50.000 0.00 0.00 0.00 4.30
507 508 1.115467 ACTGTATGCCTCTTCTCCCG 58.885 55.000 0.00 0.00 0.00 5.14
508 509 1.115467 CTGTATGCCTCTTCTCCCGT 58.885 55.000 0.00 0.00 0.00 5.28
509 510 1.067821 CTGTATGCCTCTTCTCCCGTC 59.932 57.143 0.00 0.00 0.00 4.79
510 511 1.112113 GTATGCCTCTTCTCCCGTCA 58.888 55.000 0.00 0.00 0.00 4.35
511 512 1.480954 GTATGCCTCTTCTCCCGTCAA 59.519 52.381 0.00 0.00 0.00 3.18
512 513 0.539051 ATGCCTCTTCTCCCGTCAAG 59.461 55.000 0.00 0.00 0.00 3.02
513 514 0.541998 TGCCTCTTCTCCCGTCAAGA 60.542 55.000 0.00 0.00 0.00 3.02
514 515 0.108567 GCCTCTTCTCCCGTCAAGAC 60.109 60.000 0.00 0.00 0.00 3.01
867 868 2.105128 GAGCCCATGTCCGACTCG 59.895 66.667 0.00 0.00 0.00 4.18
879 880 0.179084 CCGACTCGCTCTCTCTCTCT 60.179 60.000 0.00 0.00 0.00 3.10
880 881 1.209128 CGACTCGCTCTCTCTCTCTC 58.791 60.000 0.00 0.00 0.00 3.20
881 882 1.202417 CGACTCGCTCTCTCTCTCTCT 60.202 57.143 0.00 0.00 0.00 3.10
882 883 2.474816 GACTCGCTCTCTCTCTCTCTC 58.525 57.143 0.00 0.00 0.00 3.20
883 884 2.101582 GACTCGCTCTCTCTCTCTCTCT 59.898 54.545 0.00 0.00 0.00 3.10
884 885 2.159043 ACTCGCTCTCTCTCTCTCTCTG 60.159 54.545 0.00 0.00 0.00 3.35
939 984 4.874966 CAGTCTTGCAGATAAGGAAGGAAG 59.125 45.833 0.00 0.00 37.52 3.46
948 993 0.988063 AAGGAAGGAAGGCTCTGGTC 59.012 55.000 0.00 0.00 0.00 4.02
1014 1060 4.064768 CCAATGCCTGGGCCTCCA 62.065 66.667 4.53 0.00 42.17 3.86
1015 1061 2.757099 CAATGCCTGGGCCTCCAC 60.757 66.667 4.53 0.00 38.32 4.02
1016 1062 2.943265 AATGCCTGGGCCTCCACT 60.943 61.111 4.53 0.00 38.32 4.00
1017 1063 3.292481 AATGCCTGGGCCTCCACTG 62.292 63.158 4.53 0.00 38.32 3.66
1155 1207 3.021473 TAACCCATCGTCGCCACCC 62.021 63.158 0.00 0.00 0.00 4.61
1374 1453 1.215647 CGAACGAGGAGACCAAGGG 59.784 63.158 0.00 0.00 0.00 3.95
1599 1682 3.075134 AGCAACTCCATTCCCTTTCTCTT 59.925 43.478 0.00 0.00 0.00 2.85
1669 1753 9.346725 GTCAGGAAATTCAGTTTTACATGAATC 57.653 33.333 0.00 0.00 43.56 2.52
1677 1761 6.437928 TCAGTTTTACATGAATCAACTGCAC 58.562 36.000 18.64 0.00 42.68 4.57
1702 1787 6.926272 CGCTCTTATAATCTTCCAAACTAGCT 59.074 38.462 0.00 0.00 0.00 3.32
1707 1792 3.847671 ATCTTCCAAACTAGCTAGCCC 57.152 47.619 20.91 0.00 0.00 5.19
1767 1874 4.142609 TCTATGAATTCACTCACCTGCC 57.857 45.455 11.07 0.00 0.00 4.85
1770 1877 0.674895 GAATTCACTCACCTGCCGCT 60.675 55.000 0.00 0.00 0.00 5.52
1787 1894 3.437049 GCCGCTCTAATATTGGATTGGAC 59.563 47.826 18.10 9.35 0.00 4.02
1952 2059 5.301551 CCTCTAGATCTCTCTTTGCTTAGCA 59.698 44.000 1.39 1.39 32.63 3.49
1953 2060 6.142818 TCTAGATCTCTCTTTGCTTAGCAC 57.857 41.667 6.34 0.00 33.63 4.40
1973 2081 2.679336 ACCATTGTATTTCCGGCGTAAC 59.321 45.455 6.01 0.00 0.00 2.50
2019 2135 5.636121 TGTTGCGACGTTATGAGAGTAAATT 59.364 36.000 0.00 0.00 0.00 1.82
2076 2192 1.003355 CGGAGGCGAATATGGGCAT 60.003 57.895 0.00 0.00 0.00 4.40
2085 2201 2.716217 GAATATGGGCATCAGGGTAGC 58.284 52.381 0.00 0.00 0.00 3.58
2089 2205 1.340399 TGGGCATCAGGGTAGCAGAG 61.340 60.000 0.00 0.00 0.00 3.35
2090 2206 1.050988 GGGCATCAGGGTAGCAGAGA 61.051 60.000 0.00 0.00 0.00 3.10
2093 2209 1.472376 GCATCAGGGTAGCAGAGACAC 60.472 57.143 0.00 0.00 0.00 3.67
2108 2224 2.177594 GACACTGGAGAGGTGCTGGG 62.178 65.000 0.00 0.00 38.14 4.45
2109 2225 2.205462 ACTGGAGAGGTGCTGGGT 59.795 61.111 0.00 0.00 0.00 4.51
2110 2226 2.219875 ACTGGAGAGGTGCTGGGTG 61.220 63.158 0.00 0.00 0.00 4.61
2111 2227 3.618780 CTGGAGAGGTGCTGGGTGC 62.619 68.421 0.00 0.00 43.25 5.01
2112 2228 3.325753 GGAGAGGTGCTGGGTGCT 61.326 66.667 0.00 0.00 43.37 4.40
2113 2229 1.990060 GGAGAGGTGCTGGGTGCTA 60.990 63.158 0.00 0.00 43.37 3.49
2114 2230 1.519719 GAGAGGTGCTGGGTGCTAG 59.480 63.158 0.00 0.00 43.37 3.42
2115 2231 1.965754 GAGAGGTGCTGGGTGCTAGG 61.966 65.000 0.00 0.00 43.37 3.02
2199 2316 5.716094 TGTACAAGAGATTACAAAGCGCTA 58.284 37.500 12.05 0.00 0.00 4.26
2228 2346 1.477195 CCACAAACCGACCCTACCAAA 60.477 52.381 0.00 0.00 0.00 3.28
2308 2426 2.397413 CTGTCGTGGCCCAAGTCCTT 62.397 60.000 0.00 0.00 0.00 3.36
2407 2525 3.252701 GCTTCCATAATGTCCAGCAGATG 59.747 47.826 0.00 0.00 0.00 2.90
2488 2606 1.114722 ACCACCATTGCACCAACCTG 61.115 55.000 0.00 0.00 0.00 4.00
2589 2707 1.200716 CTGCTGCAAAATGTGGTCGAT 59.799 47.619 3.02 0.00 0.00 3.59
2606 2724 0.461961 GATCGTGTCTTCCTCCTGGG 59.538 60.000 0.00 0.00 0.00 4.45
2823 2941 1.077501 CTCCGGCCACATTCCACAT 60.078 57.895 2.24 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.376918 GGCTGCTTGGGACTTGGC 61.377 66.667 0.00 0.00 0.00 4.52
1 2 2.677875 GGGCTGCTTGGGACTTGG 60.678 66.667 0.00 0.00 0.00 3.61
2 3 1.676967 GAGGGCTGCTTGGGACTTG 60.677 63.158 0.00 0.00 0.00 3.16
3 4 1.504275 ATGAGGGCTGCTTGGGACTT 61.504 55.000 0.00 0.00 0.00 3.01
4 5 1.927527 ATGAGGGCTGCTTGGGACT 60.928 57.895 0.00 0.00 0.00 3.85
5 6 1.751927 CATGAGGGCTGCTTGGGAC 60.752 63.158 0.00 0.00 0.00 4.46
7 8 1.304713 AACATGAGGGCTGCTTGGG 60.305 57.895 0.00 0.00 0.00 4.12
8 9 1.318158 GGAACATGAGGGCTGCTTGG 61.318 60.000 0.00 0.00 0.00 3.61
9 10 1.651240 CGGAACATGAGGGCTGCTTG 61.651 60.000 0.00 0.00 0.00 4.01
10 11 1.377725 CGGAACATGAGGGCTGCTT 60.378 57.895 0.00 0.00 0.00 3.91
11 12 2.270205 CGGAACATGAGGGCTGCT 59.730 61.111 0.00 0.00 0.00 4.24
12 13 2.819984 TTCCGGAACATGAGGGCTGC 62.820 60.000 14.35 0.00 0.00 5.25
13 14 0.745845 CTTCCGGAACATGAGGGCTG 60.746 60.000 14.35 0.00 0.00 4.85
14 15 0.909610 TCTTCCGGAACATGAGGGCT 60.910 55.000 14.35 0.00 0.00 5.19
15 16 0.035439 TTCTTCCGGAACATGAGGGC 60.035 55.000 14.35 0.00 0.00 5.19
24 25 1.621814 CCAGTACTGGTTCTTCCGGAA 59.378 52.381 30.57 17.73 45.09 4.30
25 26 1.263356 CCAGTACTGGTTCTTCCGGA 58.737 55.000 30.57 0.00 45.09 5.14
26 27 3.834732 CCAGTACTGGTTCTTCCGG 57.165 57.895 30.57 4.74 45.53 5.14
36 37 4.023878 GGAGAAGACGTATAGCCAGTACTG 60.024 50.000 16.34 16.34 0.00 2.74
37 38 4.136051 GGAGAAGACGTATAGCCAGTACT 58.864 47.826 0.00 0.00 0.00 2.73
38 39 3.059051 CGGAGAAGACGTATAGCCAGTAC 60.059 52.174 0.00 0.00 0.00 2.73
39 40 3.136763 CGGAGAAGACGTATAGCCAGTA 58.863 50.000 0.00 0.00 0.00 2.74
40 41 1.948145 CGGAGAAGACGTATAGCCAGT 59.052 52.381 0.00 0.00 0.00 4.00
41 42 1.948145 ACGGAGAAGACGTATAGCCAG 59.052 52.381 0.00 0.00 43.60 4.85
42 43 1.674441 CACGGAGAAGACGTATAGCCA 59.326 52.381 0.00 0.00 43.58 4.75
43 44 1.674962 ACACGGAGAAGACGTATAGCC 59.325 52.381 0.00 0.00 43.58 3.93
44 45 2.353889 TCACACGGAGAAGACGTATAGC 59.646 50.000 0.00 0.00 43.58 2.97
45 46 4.341099 GTTCACACGGAGAAGACGTATAG 58.659 47.826 0.00 0.00 43.58 1.31
46 47 3.127548 GGTTCACACGGAGAAGACGTATA 59.872 47.826 0.00 0.00 43.58 1.47
47 48 2.094854 GGTTCACACGGAGAAGACGTAT 60.095 50.000 0.00 0.00 43.58 3.06
48 49 1.267806 GGTTCACACGGAGAAGACGTA 59.732 52.381 0.00 0.00 43.58 3.57
49 50 0.031721 GGTTCACACGGAGAAGACGT 59.968 55.000 0.00 0.00 46.82 4.34
50 51 0.666577 GGGTTCACACGGAGAAGACG 60.667 60.000 0.00 0.00 37.36 4.18
51 52 0.680061 AGGGTTCACACGGAGAAGAC 59.320 55.000 0.00 0.00 0.00 3.01
52 53 2.168496 CTAGGGTTCACACGGAGAAGA 58.832 52.381 0.00 0.00 0.00 2.87
53 54 1.404315 GCTAGGGTTCACACGGAGAAG 60.404 57.143 0.00 0.00 0.00 2.85
54 55 0.606604 GCTAGGGTTCACACGGAGAA 59.393 55.000 0.00 0.00 0.00 2.87
55 56 0.541063 TGCTAGGGTTCACACGGAGA 60.541 55.000 0.00 0.00 0.00 3.71
56 57 0.320374 TTGCTAGGGTTCACACGGAG 59.680 55.000 0.00 0.00 0.00 4.63
57 58 0.981183 ATTGCTAGGGTTCACACGGA 59.019 50.000 0.00 0.00 0.00 4.69
58 59 1.086696 CATTGCTAGGGTTCACACGG 58.913 55.000 0.00 0.00 0.00 4.94
59 60 1.086696 CCATTGCTAGGGTTCACACG 58.913 55.000 0.00 0.00 0.00 4.49
60 61 0.811281 GCCATTGCTAGGGTTCACAC 59.189 55.000 0.00 0.00 33.53 3.82
61 62 0.323360 GGCCATTGCTAGGGTTCACA 60.323 55.000 0.00 0.00 37.74 3.58
62 63 0.323360 TGGCCATTGCTAGGGTTCAC 60.323 55.000 0.00 0.00 37.74 3.18
63 64 0.630673 ATGGCCATTGCTAGGGTTCA 59.369 50.000 14.09 0.45 37.74 3.18
64 65 1.322442 GATGGCCATTGCTAGGGTTC 58.678 55.000 21.84 0.00 37.74 3.62
65 66 0.106015 GGATGGCCATTGCTAGGGTT 60.106 55.000 21.84 0.00 37.74 4.11
66 67 1.288508 TGGATGGCCATTGCTAGGGT 61.289 55.000 21.84 0.00 39.92 4.34
67 68 0.538977 CTGGATGGCCATTGCTAGGG 60.539 60.000 21.84 2.74 44.91 3.53
68 69 1.177256 GCTGGATGGCCATTGCTAGG 61.177 60.000 21.84 8.49 44.91 3.02
69 70 1.512996 CGCTGGATGGCCATTGCTAG 61.513 60.000 21.84 16.04 44.91 3.42
70 71 1.526686 CGCTGGATGGCCATTGCTA 60.527 57.895 21.84 4.88 44.91 3.49
71 72 2.831742 CGCTGGATGGCCATTGCT 60.832 61.111 21.84 0.00 44.91 3.91
72 73 4.580551 GCGCTGGATGGCCATTGC 62.581 66.667 21.84 21.79 44.91 3.56
73 74 2.023414 AATGCGCTGGATGGCCATTG 62.023 55.000 21.84 14.22 44.91 2.82
74 75 1.759299 AATGCGCTGGATGGCCATT 60.759 52.632 21.84 3.11 44.91 3.16
75 76 2.123597 AATGCGCTGGATGGCCAT 60.124 55.556 20.96 20.96 44.91 4.40
76 77 3.142162 CAATGCGCTGGATGGCCA 61.142 61.111 8.56 8.56 43.47 5.36
77 78 4.580551 GCAATGCGCTGGATGGCC 62.581 66.667 9.73 0.00 37.77 5.36
78 79 4.580551 GGCAATGCGCTGGATGGC 62.581 66.667 9.73 10.85 41.91 4.40
79 80 2.831742 AGGCAATGCGCTGGATGG 60.832 61.111 9.73 0.00 41.91 3.51
80 81 2.719979 GAGGCAATGCGCTGGATG 59.280 61.111 9.73 3.33 41.91 3.51
81 82 2.517875 GGAGGCAATGCGCTGGAT 60.518 61.111 9.73 0.00 41.91 3.41
99 100 0.531753 GAAGATGAGGAGCTTCCGGC 60.532 60.000 0.00 0.00 42.75 6.13
100 101 0.826715 TGAAGATGAGGAGCTTCCGG 59.173 55.000 0.00 0.00 42.89 5.14
101 102 2.275318 GTTGAAGATGAGGAGCTTCCG 58.725 52.381 0.00 0.00 42.89 4.30
102 103 2.026822 TGGTTGAAGATGAGGAGCTTCC 60.027 50.000 0.00 0.00 42.89 3.46
103 104 3.006247 GTGGTTGAAGATGAGGAGCTTC 58.994 50.000 0.00 0.00 43.68 3.86
104 105 2.613977 CGTGGTTGAAGATGAGGAGCTT 60.614 50.000 0.00 0.00 0.00 3.74
105 106 1.066573 CGTGGTTGAAGATGAGGAGCT 60.067 52.381 0.00 0.00 0.00 4.09
106 107 1.066858 TCGTGGTTGAAGATGAGGAGC 60.067 52.381 0.00 0.00 0.00 4.70
107 108 2.611518 GTCGTGGTTGAAGATGAGGAG 58.388 52.381 0.00 0.00 0.00 3.69
108 109 1.067846 CGTCGTGGTTGAAGATGAGGA 60.068 52.381 0.00 0.00 0.00 3.71
109 110 1.336887 ACGTCGTGGTTGAAGATGAGG 60.337 52.381 0.00 0.00 0.00 3.86
110 111 1.986378 GACGTCGTGGTTGAAGATGAG 59.014 52.381 0.63 0.00 0.00 2.90
111 112 1.336517 GGACGTCGTGGTTGAAGATGA 60.337 52.381 9.92 0.00 0.00 2.92
112 113 1.068474 GGACGTCGTGGTTGAAGATG 58.932 55.000 9.92 0.00 0.00 2.90
113 114 0.966920 AGGACGTCGTGGTTGAAGAT 59.033 50.000 10.45 0.00 0.00 2.40
114 115 0.313043 GAGGACGTCGTGGTTGAAGA 59.687 55.000 16.63 0.00 0.00 2.87
115 116 0.031585 TGAGGACGTCGTGGTTGAAG 59.968 55.000 16.63 0.00 0.00 3.02
116 117 0.460722 TTGAGGACGTCGTGGTTGAA 59.539 50.000 16.63 0.00 0.00 2.69
117 118 0.031585 CTTGAGGACGTCGTGGTTGA 59.968 55.000 16.63 0.00 0.00 3.18
118 119 0.031585 TCTTGAGGACGTCGTGGTTG 59.968 55.000 16.63 3.44 0.00 3.77
119 120 0.966920 ATCTTGAGGACGTCGTGGTT 59.033 50.000 16.63 0.00 0.00 3.67
120 121 0.526662 GATCTTGAGGACGTCGTGGT 59.473 55.000 16.63 0.00 0.00 4.16
121 122 0.523546 CGATCTTGAGGACGTCGTGG 60.524 60.000 16.63 5.88 0.00 4.94
122 123 0.168348 ACGATCTTGAGGACGTCGTG 59.832 55.000 16.63 1.38 43.07 4.35
123 124 0.447011 GACGATCTTGAGGACGTCGT 59.553 55.000 11.12 11.12 46.78 4.34
124 125 3.221834 GACGATCTTGAGGACGTCG 57.778 57.895 9.92 0.00 43.60 5.12
126 127 2.438411 AGAAGACGATCTTGAGGACGT 58.562 47.619 5.20 0.00 36.73 4.34
127 128 3.495670 AAGAAGACGATCTTGAGGACG 57.504 47.619 5.20 0.00 36.73 4.79
128 129 4.810790 TGAAAGAAGACGATCTTGAGGAC 58.189 43.478 5.20 0.00 39.54 3.85
129 130 5.468540 TTGAAAGAAGACGATCTTGAGGA 57.531 39.130 5.20 0.00 39.54 3.71
130 131 4.092675 GCTTGAAAGAAGACGATCTTGAGG 59.907 45.833 5.20 0.00 39.54 3.86
131 132 4.092675 GGCTTGAAAGAAGACGATCTTGAG 59.907 45.833 5.20 5.28 39.54 3.02
132 133 3.997021 GGCTTGAAAGAAGACGATCTTGA 59.003 43.478 5.20 0.00 39.54 3.02
133 134 4.333633 GGCTTGAAAGAAGACGATCTTG 57.666 45.455 5.20 0.00 39.54 3.02
140 141 3.394719 AGAACTCGGCTTGAAAGAAGAC 58.605 45.455 0.00 0.00 0.00 3.01
141 142 3.753294 AGAACTCGGCTTGAAAGAAGA 57.247 42.857 0.00 0.00 0.00 2.87
142 143 3.187432 GGAAGAACTCGGCTTGAAAGAAG 59.813 47.826 0.00 0.00 0.00 2.85
143 144 3.139077 GGAAGAACTCGGCTTGAAAGAA 58.861 45.455 0.00 0.00 0.00 2.52
144 145 2.104111 TGGAAGAACTCGGCTTGAAAGA 59.896 45.455 0.00 0.00 0.00 2.52
145 146 2.494059 TGGAAGAACTCGGCTTGAAAG 58.506 47.619 0.00 0.00 0.00 2.62
146 147 2.631160 TGGAAGAACTCGGCTTGAAA 57.369 45.000 0.00 0.00 0.00 2.69
147 148 2.038426 TGATGGAAGAACTCGGCTTGAA 59.962 45.455 0.00 0.00 0.00 2.69
148 149 1.623311 TGATGGAAGAACTCGGCTTGA 59.377 47.619 0.00 0.00 0.00 3.02
149 150 2.099141 TGATGGAAGAACTCGGCTTG 57.901 50.000 0.00 0.00 0.00 4.01
150 151 3.012518 CAATGATGGAAGAACTCGGCTT 58.987 45.455 0.00 0.00 0.00 4.35
151 152 2.636830 CAATGATGGAAGAACTCGGCT 58.363 47.619 0.00 0.00 0.00 5.52
152 153 1.064654 GCAATGATGGAAGAACTCGGC 59.935 52.381 0.00 0.00 0.00 5.54
153 154 1.672881 GGCAATGATGGAAGAACTCGG 59.327 52.381 0.00 0.00 0.00 4.63
154 155 2.611292 GAGGCAATGATGGAAGAACTCG 59.389 50.000 0.00 0.00 0.00 4.18
155 156 2.948315 GGAGGCAATGATGGAAGAACTC 59.052 50.000 0.00 0.00 0.00 3.01
156 157 2.309755 TGGAGGCAATGATGGAAGAACT 59.690 45.455 0.00 0.00 0.00 3.01
157 158 2.686915 CTGGAGGCAATGATGGAAGAAC 59.313 50.000 0.00 0.00 0.00 3.01
158 159 2.577563 TCTGGAGGCAATGATGGAAGAA 59.422 45.455 0.00 0.00 0.00 2.52
159 160 2.199208 TCTGGAGGCAATGATGGAAGA 58.801 47.619 0.00 0.00 0.00 2.87
160 161 2.723322 TCTGGAGGCAATGATGGAAG 57.277 50.000 0.00 0.00 0.00 3.46
161 162 2.486013 CGATCTGGAGGCAATGATGGAA 60.486 50.000 0.00 0.00 0.00 3.53
162 163 1.071228 CGATCTGGAGGCAATGATGGA 59.929 52.381 0.00 0.00 0.00 3.41
163 164 1.520494 CGATCTGGAGGCAATGATGG 58.480 55.000 0.00 0.00 0.00 3.51
164 165 1.071228 TCCGATCTGGAGGCAATGATG 59.929 52.381 2.65 0.00 43.74 3.07
165 166 1.427809 TCCGATCTGGAGGCAATGAT 58.572 50.000 2.65 0.00 43.74 2.45
166 167 2.914908 TCCGATCTGGAGGCAATGA 58.085 52.632 2.65 0.00 43.74 2.57
189 190 4.241555 ATCAGGATCGGGCACGCC 62.242 66.667 1.67 0.00 40.69 5.68
190 191 2.663188 GATCAGGATCGGGCACGC 60.663 66.667 1.67 0.00 40.69 5.34
191 192 2.029666 GGATCAGGATCGGGCACG 59.970 66.667 0.00 0.00 38.69 5.34
192 193 2.427753 GGGATCAGGATCGGGCAC 59.572 66.667 3.38 0.00 38.69 5.01
193 194 3.233980 CGGGATCAGGATCGGGCA 61.234 66.667 3.38 0.00 38.69 5.36
194 195 2.441822 CTTCGGGATCAGGATCGGGC 62.442 65.000 3.38 0.00 38.69 6.13
195 196 1.668294 CTTCGGGATCAGGATCGGG 59.332 63.158 3.38 0.00 38.69 5.14
196 197 1.005630 GCTTCGGGATCAGGATCGG 60.006 63.158 3.38 0.00 38.69 4.18
197 198 0.038709 GAGCTTCGGGATCAGGATCG 60.039 60.000 3.38 0.00 38.69 3.69
198 199 0.320050 GGAGCTTCGGGATCAGGATC 59.680 60.000 0.55 0.55 37.11 3.36
199 200 0.399091 TGGAGCTTCGGGATCAGGAT 60.399 55.000 0.00 0.00 30.93 3.24
200 201 0.399091 ATGGAGCTTCGGGATCAGGA 60.399 55.000 0.00 0.00 30.93 3.86
201 202 0.034616 GATGGAGCTTCGGGATCAGG 59.965 60.000 0.00 0.00 30.93 3.86
202 203 0.755079 TGATGGAGCTTCGGGATCAG 59.245 55.000 0.00 0.00 30.93 2.90
203 204 1.345741 GATGATGGAGCTTCGGGATCA 59.654 52.381 0.00 0.00 30.93 2.92
204 205 1.338579 GGATGATGGAGCTTCGGGATC 60.339 57.143 0.00 0.00 0.00 3.36
205 206 0.689623 GGATGATGGAGCTTCGGGAT 59.310 55.000 0.00 0.00 0.00 3.85
206 207 0.690744 TGGATGATGGAGCTTCGGGA 60.691 55.000 0.00 0.00 0.00 5.14
207 208 0.399454 ATGGATGATGGAGCTTCGGG 59.601 55.000 0.00 0.00 0.00 5.14
208 209 1.805869 GATGGATGATGGAGCTTCGG 58.194 55.000 0.00 0.00 0.00 4.30
209 210 1.000171 TCGATGGATGATGGAGCTTCG 60.000 52.381 0.00 0.00 0.00 3.79
210 211 2.827800 TCGATGGATGATGGAGCTTC 57.172 50.000 0.00 0.00 0.00 3.86
211 212 2.905085 AGATCGATGGATGATGGAGCTT 59.095 45.455 0.54 0.00 32.10 3.74
212 213 2.538222 AGATCGATGGATGATGGAGCT 58.462 47.619 0.54 0.00 31.29 4.09
213 214 3.331478 AAGATCGATGGATGATGGAGC 57.669 47.619 0.54 0.00 31.51 4.70
214 215 3.436015 GCAAAGATCGATGGATGATGGAG 59.564 47.826 0.54 0.00 31.51 3.86
215 216 3.072038 AGCAAAGATCGATGGATGATGGA 59.928 43.478 0.54 0.00 31.51 3.41
216 217 3.409570 AGCAAAGATCGATGGATGATGG 58.590 45.455 0.54 0.00 31.51 3.51
217 218 3.123116 CGAGCAAAGATCGATGGATGATG 59.877 47.826 0.54 0.00 44.55 3.07
218 219 3.006217 TCGAGCAAAGATCGATGGATGAT 59.994 43.478 0.54 0.00 45.37 2.45
219 220 2.362077 TCGAGCAAAGATCGATGGATGA 59.638 45.455 0.54 0.00 45.37 2.92
220 221 2.747436 TCGAGCAAAGATCGATGGATG 58.253 47.619 0.54 0.00 45.37 3.51
227 228 2.346847 CAGAAACCTCGAGCAAAGATCG 59.653 50.000 6.99 0.00 43.08 3.69
228 229 3.330267 ACAGAAACCTCGAGCAAAGATC 58.670 45.455 6.99 0.00 0.00 2.75
229 230 3.409026 ACAGAAACCTCGAGCAAAGAT 57.591 42.857 6.99 0.00 0.00 2.40
230 231 2.910688 ACAGAAACCTCGAGCAAAGA 57.089 45.000 6.99 0.00 0.00 2.52
231 232 2.224314 GGAACAGAAACCTCGAGCAAAG 59.776 50.000 6.99 0.00 0.00 2.77
232 233 2.218603 GGAACAGAAACCTCGAGCAAA 58.781 47.619 6.99 0.00 0.00 3.68
233 234 1.872237 CGGAACAGAAACCTCGAGCAA 60.872 52.381 6.99 0.00 0.00 3.91
234 235 0.319555 CGGAACAGAAACCTCGAGCA 60.320 55.000 6.99 0.00 0.00 4.26
235 236 1.627550 GCGGAACAGAAACCTCGAGC 61.628 60.000 6.99 0.00 0.00 5.03
236 237 1.344942 CGCGGAACAGAAACCTCGAG 61.345 60.000 5.13 5.13 36.65 4.04
237 238 1.372499 CGCGGAACAGAAACCTCGA 60.372 57.895 0.00 0.00 36.65 4.04
238 239 1.344942 CTCGCGGAACAGAAACCTCG 61.345 60.000 6.13 0.00 36.01 4.63
239 240 1.627550 GCTCGCGGAACAGAAACCTC 61.628 60.000 6.13 0.00 0.00 3.85
240 241 1.668151 GCTCGCGGAACAGAAACCT 60.668 57.895 6.13 0.00 0.00 3.50
241 242 2.861006 GCTCGCGGAACAGAAACC 59.139 61.111 6.13 0.00 0.00 3.27
242 243 2.470286 CGCTCGCGGAACAGAAAC 59.530 61.111 6.13 0.00 35.56 2.78
252 253 4.849329 GGGACACTACCGCTCGCG 62.849 72.222 0.00 0.00 39.44 5.87
253 254 1.660560 TTAGGGACACTACCGCTCGC 61.661 60.000 0.00 0.00 0.00 5.03
254 255 0.381089 CTTAGGGACACTACCGCTCG 59.619 60.000 0.00 0.00 0.00 5.03
255 256 0.745468 CCTTAGGGACACTACCGCTC 59.255 60.000 0.00 0.00 33.58 5.03
256 257 1.328430 GCCTTAGGGACACTACCGCT 61.328 60.000 0.00 0.00 33.58 5.52
257 258 1.143401 GCCTTAGGGACACTACCGC 59.857 63.158 0.00 0.00 33.58 5.68
258 259 1.683418 GGGCCTTAGGGACACTACCG 61.683 65.000 0.84 0.00 44.19 4.02
259 260 0.326332 AGGGCCTTAGGGACACTACC 60.326 60.000 0.00 0.00 44.19 3.18
260 261 1.121378 GAGGGCCTTAGGGACACTAC 58.879 60.000 7.89 0.00 44.19 2.73
261 262 0.396695 CGAGGGCCTTAGGGACACTA 60.397 60.000 7.89 0.00 44.19 2.74
262 263 1.686110 CGAGGGCCTTAGGGACACT 60.686 63.158 7.89 0.00 44.19 3.55
263 264 1.684734 TCGAGGGCCTTAGGGACAC 60.685 63.158 7.89 0.00 44.19 3.67
264 265 1.684734 GTCGAGGGCCTTAGGGACA 60.685 63.158 7.89 0.00 44.19 4.02
265 266 2.433146 GGTCGAGGGCCTTAGGGAC 61.433 68.421 7.89 12.98 40.80 4.46
266 267 2.042230 GGTCGAGGGCCTTAGGGA 60.042 66.667 7.89 0.00 33.58 4.20
267 268 3.162154 GGGTCGAGGGCCTTAGGG 61.162 72.222 7.89 0.00 0.00 3.53
268 269 3.162154 GGGGTCGAGGGCCTTAGG 61.162 72.222 7.89 0.00 0.00 2.69
269 270 3.162154 GGGGGTCGAGGGCCTTAG 61.162 72.222 7.89 5.43 0.00 2.18
303 304 3.291383 CTCCTCTCCCCGCTAGCG 61.291 72.222 29.93 29.93 39.44 4.26
304 305 2.915137 CCTCCTCTCCCCGCTAGC 60.915 72.222 4.06 4.06 0.00 3.42
305 306 2.203567 CCCTCCTCTCCCCGCTAG 60.204 72.222 0.00 0.00 0.00 3.42
306 307 3.834056 CCCCTCCTCTCCCCGCTA 61.834 72.222 0.00 0.00 0.00 4.26
309 310 4.548513 CCTCCCCTCCTCTCCCCG 62.549 77.778 0.00 0.00 0.00 5.73
310 311 4.179599 CCCTCCCCTCCTCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
311 312 4.179599 CCCCTCCCCTCCTCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
312 313 3.036959 TCCCCTCCCCTCCTCTCC 61.037 72.222 0.00 0.00 0.00 3.71
313 314 1.376249 ATCTCCCCTCCCCTCCTCTC 61.376 65.000 0.00 0.00 0.00 3.20
314 315 0.938926 AATCTCCCCTCCCCTCCTCT 60.939 60.000 0.00 0.00 0.00 3.69
315 316 0.766288 CAATCTCCCCTCCCCTCCTC 60.766 65.000 0.00 0.00 0.00 3.71
316 317 1.319799 CAATCTCCCCTCCCCTCCT 59.680 63.158 0.00 0.00 0.00 3.69
317 318 1.772156 CCAATCTCCCCTCCCCTCC 60.772 68.421 0.00 0.00 0.00 4.30
318 319 0.624795 AACCAATCTCCCCTCCCCTC 60.625 60.000 0.00 0.00 0.00 4.30
319 320 0.624795 GAACCAATCTCCCCTCCCCT 60.625 60.000 0.00 0.00 0.00 4.79
320 321 0.624795 AGAACCAATCTCCCCTCCCC 60.625 60.000 0.00 0.00 30.46 4.81
321 322 3.029083 AGAACCAATCTCCCCTCCC 57.971 57.895 0.00 0.00 30.46 4.30
329 330 1.831736 CCCCACGTAGAGAACCAATCT 59.168 52.381 0.00 0.00 42.61 2.40
330 331 1.742750 GCCCCACGTAGAGAACCAATC 60.743 57.143 0.00 0.00 0.00 2.67
331 332 0.252197 GCCCCACGTAGAGAACCAAT 59.748 55.000 0.00 0.00 0.00 3.16
332 333 1.675219 GCCCCACGTAGAGAACCAA 59.325 57.895 0.00 0.00 0.00 3.67
333 334 2.642254 CGCCCCACGTAGAGAACCA 61.642 63.158 0.00 0.00 36.87 3.67
334 335 1.880819 TTCGCCCCACGTAGAGAACC 61.881 60.000 0.00 0.00 44.19 3.62
335 336 0.037975 TTTCGCCCCACGTAGAGAAC 60.038 55.000 0.00 0.00 44.19 3.01
336 337 0.245539 CTTTCGCCCCACGTAGAGAA 59.754 55.000 0.00 0.00 44.19 2.87
337 338 0.896940 ACTTTCGCCCCACGTAGAGA 60.897 55.000 0.00 0.00 44.19 3.10
338 339 0.458025 GACTTTCGCCCCACGTAGAG 60.458 60.000 0.00 0.00 44.19 2.43
339 340 1.588082 GACTTTCGCCCCACGTAGA 59.412 57.895 0.00 0.00 44.19 2.59
340 341 1.804326 CGACTTTCGCCCCACGTAG 60.804 63.158 0.00 0.00 44.19 3.51
341 342 2.259204 CGACTTTCGCCCCACGTA 59.741 61.111 0.00 0.00 44.19 3.57
362 363 2.758770 TTTCACGTTCCTCTCGGCGG 62.759 60.000 7.21 0.00 0.00 6.13
363 364 1.372499 TTTCACGTTCCTCTCGGCG 60.372 57.895 0.00 0.00 0.00 6.46
364 365 1.289800 GGTTTCACGTTCCTCTCGGC 61.290 60.000 0.00 0.00 0.00 5.54
365 366 0.669625 GGGTTTCACGTTCCTCTCGG 60.670 60.000 0.00 0.00 0.00 4.63
366 367 0.317479 AGGGTTTCACGTTCCTCTCG 59.683 55.000 0.00 0.00 0.00 4.04
367 368 3.324117 GTTAGGGTTTCACGTTCCTCTC 58.676 50.000 0.00 0.00 0.00 3.20
368 369 2.288640 CGTTAGGGTTTCACGTTCCTCT 60.289 50.000 0.00 0.00 0.00 3.69
369 370 2.064014 CGTTAGGGTTTCACGTTCCTC 58.936 52.381 0.00 0.00 0.00 3.71
370 371 1.688197 TCGTTAGGGTTTCACGTTCCT 59.312 47.619 0.00 0.00 35.40 3.36
371 372 2.064014 CTCGTTAGGGTTTCACGTTCC 58.936 52.381 0.00 0.00 35.40 3.62
372 373 2.985139 CTCTCGTTAGGGTTTCACGTTC 59.015 50.000 0.00 0.00 35.40 3.95
373 374 2.288640 CCTCTCGTTAGGGTTTCACGTT 60.289 50.000 0.00 0.00 35.40 3.99
374 375 1.271656 CCTCTCGTTAGGGTTTCACGT 59.728 52.381 0.00 0.00 35.40 4.49
375 376 1.992170 CCTCTCGTTAGGGTTTCACG 58.008 55.000 0.00 0.00 32.55 4.35
383 384 2.098770 CGTAAGTTCCCCTCTCGTTAGG 59.901 54.545 0.00 0.00 36.30 2.69
384 385 3.417690 CGTAAGTTCCCCTCTCGTTAG 57.582 52.381 0.00 0.00 0.00 2.34
395 396 6.096365 CGTGTGACAACGTACGTAAGTTCC 62.096 50.000 23.12 16.61 43.41 3.62
396 397 3.122026 CGTGTGACAACGTACGTAAGTTC 60.122 47.826 23.12 18.12 43.41 3.01
397 398 2.783284 CGTGTGACAACGTACGTAAGTT 59.217 45.455 23.12 19.24 43.41 2.66
398 399 2.375110 CGTGTGACAACGTACGTAAGT 58.625 47.619 23.12 22.28 44.43 2.24
408 409 3.185797 GGGATCAAACTACGTGTGACAAC 59.814 47.826 0.00 0.00 32.15 3.32
409 410 3.070446 AGGGATCAAACTACGTGTGACAA 59.930 43.478 0.00 0.00 32.15 3.18
410 411 2.631062 AGGGATCAAACTACGTGTGACA 59.369 45.455 0.00 0.00 32.15 3.58
411 412 3.314541 AGGGATCAAACTACGTGTGAC 57.685 47.619 0.00 0.00 32.15 3.67
412 413 4.082408 CACTAGGGATCAAACTACGTGTGA 60.082 45.833 0.00 0.00 34.03 3.58
413 414 4.174009 CACTAGGGATCAAACTACGTGTG 58.826 47.826 0.00 0.00 0.00 3.82
414 415 3.194968 CCACTAGGGATCAAACTACGTGT 59.805 47.826 0.00 0.00 40.01 4.49
415 416 3.194968 ACCACTAGGGATCAAACTACGTG 59.805 47.826 0.00 4.99 41.15 4.49
416 417 3.438183 ACCACTAGGGATCAAACTACGT 58.562 45.455 0.00 0.00 41.15 3.57
417 418 4.430908 GAACCACTAGGGATCAAACTACG 58.569 47.826 0.00 0.00 38.31 3.51
418 419 4.767478 GGAACCACTAGGGATCAAACTAC 58.233 47.826 0.00 0.00 40.12 2.73
436 437 5.353111 TCGGTTTCATTTTTCTTTGGGAAC 58.647 37.500 0.00 0.00 33.13 3.62
437 438 5.599999 TCGGTTTCATTTTTCTTTGGGAA 57.400 34.783 0.00 0.00 0.00 3.97
438 439 5.599999 TTCGGTTTCATTTTTCTTTGGGA 57.400 34.783 0.00 0.00 0.00 4.37
439 440 5.815222 AGTTTCGGTTTCATTTTTCTTTGGG 59.185 36.000 0.00 0.00 0.00 4.12
440 441 6.704819 CAGTTTCGGTTTCATTTTTCTTTGG 58.295 36.000 0.00 0.00 0.00 3.28
441 442 6.183360 TGCAGTTTCGGTTTCATTTTTCTTTG 60.183 34.615 0.00 0.00 0.00 2.77
442 443 5.872070 TGCAGTTTCGGTTTCATTTTTCTTT 59.128 32.000 0.00 0.00 0.00 2.52
443 444 5.290885 GTGCAGTTTCGGTTTCATTTTTCTT 59.709 36.000 0.00 0.00 0.00 2.52
444 445 4.803613 GTGCAGTTTCGGTTTCATTTTTCT 59.196 37.500 0.00 0.00 0.00 2.52
445 446 4.317069 CGTGCAGTTTCGGTTTCATTTTTC 60.317 41.667 0.00 0.00 0.00 2.29
446 447 3.549873 CGTGCAGTTTCGGTTTCATTTTT 59.450 39.130 0.00 0.00 0.00 1.94
447 448 3.112580 CGTGCAGTTTCGGTTTCATTTT 58.887 40.909 0.00 0.00 0.00 1.82
448 449 2.726633 CGTGCAGTTTCGGTTTCATTT 58.273 42.857 0.00 0.00 0.00 2.32
449 450 1.599419 GCGTGCAGTTTCGGTTTCATT 60.599 47.619 0.00 0.00 0.00 2.57
450 451 0.040425 GCGTGCAGTTTCGGTTTCAT 60.040 50.000 0.00 0.00 0.00 2.57
451 452 1.353804 GCGTGCAGTTTCGGTTTCA 59.646 52.632 0.00 0.00 0.00 2.69
452 453 1.370051 GGCGTGCAGTTTCGGTTTC 60.370 57.895 0.00 0.00 0.00 2.78
453 454 1.381165 AAGGCGTGCAGTTTCGGTTT 61.381 50.000 0.00 0.00 0.00 3.27
454 455 1.822186 AAGGCGTGCAGTTTCGGTT 60.822 52.632 0.00 0.00 0.00 4.44
455 456 2.203153 AAGGCGTGCAGTTTCGGT 60.203 55.556 0.00 0.00 0.00 4.69
456 457 1.577328 ATCAAGGCGTGCAGTTTCGG 61.577 55.000 0.00 0.00 0.00 4.30
457 458 0.453282 CATCAAGGCGTGCAGTTTCG 60.453 55.000 0.00 0.00 0.00 3.46
458 459 0.730494 GCATCAAGGCGTGCAGTTTC 60.730 55.000 0.00 0.00 40.94 2.78
459 460 1.286880 GCATCAAGGCGTGCAGTTT 59.713 52.632 0.00 0.00 40.94 2.66
460 461 1.898094 TGCATCAAGGCGTGCAGTT 60.898 52.632 5.95 0.00 45.60 3.16
461 462 2.281692 TGCATCAAGGCGTGCAGT 60.282 55.556 5.95 0.00 45.60 4.40
464 465 3.624326 TTTATATGCATCAAGGCGTGC 57.376 42.857 0.19 0.00 41.61 5.34
465 466 5.618056 AGATTTATATGCATCAAGGCGTG 57.382 39.130 0.19 0.00 36.28 5.34
466 467 6.369890 CAGTAGATTTATATGCATCAAGGCGT 59.630 38.462 0.19 0.00 36.28 5.68
467 468 6.369890 ACAGTAGATTTATATGCATCAAGGCG 59.630 38.462 0.19 0.00 36.28 5.52
468 469 7.678947 ACAGTAGATTTATATGCATCAAGGC 57.321 36.000 0.19 0.00 0.00 4.35
471 472 9.166173 GGCATACAGTAGATTTATATGCATCAA 57.834 33.333 0.19 0.00 46.44 2.57
472 473 8.542926 AGGCATACAGTAGATTTATATGCATCA 58.457 33.333 0.19 0.00 46.44 3.07
473 474 8.954950 AGGCATACAGTAGATTTATATGCATC 57.045 34.615 0.19 0.00 46.44 3.91
474 475 8.766476 AGAGGCATACAGTAGATTTATATGCAT 58.234 33.333 3.79 3.79 46.44 3.96
475 476 8.138928 AGAGGCATACAGTAGATTTATATGCA 57.861 34.615 14.49 0.00 46.44 3.96
476 477 9.092876 GAAGAGGCATACAGTAGATTTATATGC 57.907 37.037 6.07 6.07 44.77 3.14
479 480 9.026121 GGAGAAGAGGCATACAGTAGATTTATA 57.974 37.037 0.00 0.00 0.00 0.98
480 481 7.038658 GGGAGAAGAGGCATACAGTAGATTTAT 60.039 40.741 0.00 0.00 0.00 1.40
481 482 6.267928 GGGAGAAGAGGCATACAGTAGATTTA 59.732 42.308 0.00 0.00 0.00 1.40
482 483 5.071115 GGGAGAAGAGGCATACAGTAGATTT 59.929 44.000 0.00 0.00 0.00 2.17
483 484 4.591072 GGGAGAAGAGGCATACAGTAGATT 59.409 45.833 0.00 0.00 0.00 2.40
484 485 4.156477 GGGAGAAGAGGCATACAGTAGAT 58.844 47.826 0.00 0.00 0.00 1.98
485 486 3.567397 GGGAGAAGAGGCATACAGTAGA 58.433 50.000 0.00 0.00 0.00 2.59
486 487 2.294791 CGGGAGAAGAGGCATACAGTAG 59.705 54.545 0.00 0.00 0.00 2.57
487 488 2.307768 CGGGAGAAGAGGCATACAGTA 58.692 52.381 0.00 0.00 0.00 2.74
488 489 1.115467 CGGGAGAAGAGGCATACAGT 58.885 55.000 0.00 0.00 0.00 3.55
489 490 1.067821 GACGGGAGAAGAGGCATACAG 59.932 57.143 0.00 0.00 0.00 2.74
490 491 1.112113 GACGGGAGAAGAGGCATACA 58.888 55.000 0.00 0.00 0.00 2.29
491 492 1.112113 TGACGGGAGAAGAGGCATAC 58.888 55.000 0.00 0.00 0.00 2.39
492 493 1.757118 CTTGACGGGAGAAGAGGCATA 59.243 52.381 0.00 0.00 0.00 3.14
493 494 0.539051 CTTGACGGGAGAAGAGGCAT 59.461 55.000 0.00 0.00 0.00 4.40
494 495 0.541998 TCTTGACGGGAGAAGAGGCA 60.542 55.000 0.00 0.00 0.00 4.75
495 496 0.108567 GTCTTGACGGGAGAAGAGGC 60.109 60.000 0.00 0.00 0.00 4.70
496 497 0.171455 CGTCTTGACGGGAGAAGAGG 59.829 60.000 14.53 0.00 0.00 3.69
497 498 1.166129 TCGTCTTGACGGGAGAAGAG 58.834 55.000 20.71 0.00 30.11 2.85
498 499 1.612676 TTCGTCTTGACGGGAGAAGA 58.387 50.000 20.71 0.00 31.35 2.87
499 500 2.263077 CATTCGTCTTGACGGGAGAAG 58.737 52.381 20.71 4.54 0.00 2.85
500 501 1.671850 GCATTCGTCTTGACGGGAGAA 60.672 52.381 20.71 9.75 0.00 2.87
501 502 0.108804 GCATTCGTCTTGACGGGAGA 60.109 55.000 20.71 7.40 0.00 3.71
502 503 0.389817 TGCATTCGTCTTGACGGGAG 60.390 55.000 20.71 12.41 0.00 4.30
503 504 0.389817 CTGCATTCGTCTTGACGGGA 60.390 55.000 20.71 11.68 0.00 5.14
504 505 0.389817 TCTGCATTCGTCTTGACGGG 60.390 55.000 20.71 12.73 0.00 5.28
505 506 1.325640 CATCTGCATTCGTCTTGACGG 59.674 52.381 20.71 8.13 0.00 4.79
506 507 1.325640 CCATCTGCATTCGTCTTGACG 59.674 52.381 15.98 15.98 0.00 4.35
834 835 1.792301 CTCGCAGCAGAATGTGTGG 59.208 57.895 0.00 0.00 39.31 4.17
846 847 4.147449 TCGGACATGGGCTCGCAG 62.147 66.667 0.00 0.00 0.00 5.18
847 848 4.451150 GTCGGACATGGGCTCGCA 62.451 66.667 2.62 0.00 0.00 5.10
849 850 2.105128 GAGTCGGACATGGGCTCG 59.895 66.667 11.27 0.00 0.00 5.03
867 868 3.462021 GAGACAGAGAGAGAGAGAGAGC 58.538 54.545 0.00 0.00 0.00 4.09
879 880 1.535833 GTTGGAGGACGAGACAGAGA 58.464 55.000 0.00 0.00 0.00 3.10
880 881 0.169230 CGTTGGAGGACGAGACAGAG 59.831 60.000 0.00 0.00 45.47 3.35
881 882 1.863662 GCGTTGGAGGACGAGACAGA 61.864 60.000 1.15 0.00 45.47 3.41
882 883 1.444553 GCGTTGGAGGACGAGACAG 60.445 63.158 1.15 0.00 45.47 3.51
883 884 2.649034 GCGTTGGAGGACGAGACA 59.351 61.111 1.15 0.00 45.47 3.41
884 885 2.504244 CGCGTTGGAGGACGAGAC 60.504 66.667 0.00 0.00 45.47 3.36
948 993 3.730761 GTTGGAGCTGTGCGCAGG 61.731 66.667 27.56 8.34 42.78 4.85
1012 1058 0.962356 GACATGGTGGAAGGCAGTGG 60.962 60.000 0.00 0.00 0.00 4.00
1013 1059 0.962356 GGACATGGTGGAAGGCAGTG 60.962 60.000 0.00 0.00 0.00 3.66
1014 1060 1.380302 GGACATGGTGGAAGGCAGT 59.620 57.895 0.00 0.00 0.00 4.40
1015 1061 1.379044 GGGACATGGTGGAAGGCAG 60.379 63.158 0.00 0.00 0.00 4.85
1016 1062 1.852157 AGGGACATGGTGGAAGGCA 60.852 57.895 0.00 0.00 0.00 4.75
1017 1063 1.379044 CAGGGACATGGTGGAAGGC 60.379 63.158 0.00 0.00 0.00 4.35
1155 1207 0.179073 AACGAGCGGATGAATGGAGG 60.179 55.000 0.00 0.00 0.00 4.30
1156 1208 1.202463 AGAACGAGCGGATGAATGGAG 60.202 52.381 0.00 0.00 0.00 3.86
1557 1636 1.519719 CTGGCTGGCTGTACCTCTC 59.480 63.158 2.00 0.00 40.22 3.20
1581 1664 4.324641 GGCTTAAGAGAAAGGGAATGGAGT 60.325 45.833 6.67 0.00 0.00 3.85
1669 1753 5.277058 GGAAGATTATAAGAGCGTGCAGTTG 60.277 44.000 0.00 0.00 0.00 3.16
1677 1761 6.926272 AGCTAGTTTGGAAGATTATAAGAGCG 59.074 38.462 0.00 0.00 0.00 5.03
1737 1844 9.778741 GGTGAGTGAATTCATAGATGGTTTATA 57.221 33.333 12.12 0.00 0.00 0.98
1738 1845 8.497745 AGGTGAGTGAATTCATAGATGGTTTAT 58.502 33.333 12.12 0.00 0.00 1.40
1767 1874 3.123621 GCGTCCAATCCAATATTAGAGCG 59.876 47.826 0.00 0.00 0.00 5.03
1770 1877 5.048782 GCATTGCGTCCAATCCAATATTAGA 60.049 40.000 0.00 0.00 39.60 2.10
1787 1894 0.578683 CATACGACTCCTGCATTGCG 59.421 55.000 3.84 0.00 0.00 4.85
1940 2047 6.350110 GGAAATACAATGGTGCTAAGCAAAGA 60.350 38.462 0.00 0.00 41.47 2.52
1941 2048 5.807011 GGAAATACAATGGTGCTAAGCAAAG 59.193 40.000 0.00 0.00 41.47 2.77
1952 2059 2.679336 GTTACGCCGGAAATACAATGGT 59.321 45.455 5.05 0.00 0.00 3.55
1953 2060 2.940410 AGTTACGCCGGAAATACAATGG 59.060 45.455 5.05 0.00 0.00 3.16
1973 2081 7.186021 ACAAAAGGACACAAGTATAACGAAG 57.814 36.000 0.00 0.00 0.00 3.79
2048 2164 1.885560 TTCGCCTCCGTTGAATCAAA 58.114 45.000 0.00 0.00 35.54 2.69
2076 2192 1.550327 CAGTGTCTCTGCTACCCTGA 58.450 55.000 0.00 0.00 37.36 3.86
2085 2201 0.246086 GCACCTCTCCAGTGTCTCTG 59.754 60.000 0.00 0.00 43.27 3.35
2089 2205 1.294780 CCAGCACCTCTCCAGTGTC 59.705 63.158 0.00 0.00 37.56 3.67
2090 2206 2.219875 CCCAGCACCTCTCCAGTGT 61.220 63.158 0.00 0.00 37.56 3.55
2093 2209 2.667418 CACCCAGCACCTCTCCAG 59.333 66.667 0.00 0.00 0.00 3.86
2199 2316 0.685097 TCGGTTTGTGGCTCTTAGCT 59.315 50.000 0.00 0.00 41.99 3.32
2228 2346 0.543174 GTGAGGAGTGGAGTGGAGGT 60.543 60.000 0.00 0.00 0.00 3.85
2308 2426 2.094894 GGACACGATCTTCGACGACTTA 59.905 50.000 0.00 0.00 43.74 2.24
2407 2525 3.781341 TTCGACACGTTTGTAATGCTC 57.219 42.857 0.00 0.00 35.47 4.26
2488 2606 1.896660 TTGCCCAGCAAACGACTCC 60.897 57.895 0.00 0.00 45.96 3.85
2589 2707 2.283529 GCCCAGGAGGAAGACACGA 61.284 63.158 0.00 0.00 38.24 4.35
2606 2724 4.384056 ACATCTCAATGCTACCTATGTGC 58.616 43.478 0.00 0.00 36.26 4.57
2823 2941 1.139498 TGAGGACAGCCCCATTTGGA 61.139 55.000 0.00 0.00 37.39 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.