Multiple sequence alignment - TraesCS5D01G395000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G395000 chr5D 100.000 2414 0 0 1 2414 462894668 462897081 0.000000e+00 4458.0
1 TraesCS5D01G395000 chr5D 81.901 1094 93 55 386 1397 462745741 462746811 0.000000e+00 826.0
2 TraesCS5D01G395000 chr5D 81.818 946 69 54 386 1243 462669074 462670004 0.000000e+00 699.0
3 TraesCS5D01G395000 chr5D 85.570 298 40 3 1909 2203 545144230 545144527 2.330000e-80 309.0
4 TraesCS5D01G395000 chr5D 86.957 276 32 4 1939 2210 391744670 391744945 8.380000e-80 307.0
5 TraesCS5D01G395000 chr5A 83.183 1219 90 54 386 1511 582886578 582887774 0.000000e+00 1009.0
6 TraesCS5D01G395000 chr5A 81.359 1089 103 54 386 1397 582652305 582653370 0.000000e+00 795.0
7 TraesCS5D01G395000 chr5A 85.333 300 38 4 1909 2203 575900083 575899785 3.020000e-79 305.0
8 TraesCS5D01G395000 chr5A 84.564 298 41 4 1909 2203 18845759 18846054 8.440000e-75 291.0
9 TraesCS5D01G395000 chr5A 84.483 174 17 10 2204 2369 582889751 582889922 1.920000e-36 163.0
10 TraesCS5D01G395000 chr5A 81.159 207 27 10 1 206 582652002 582652197 3.210000e-34 156.0
11 TraesCS5D01G395000 chr5A 91.919 99 4 2 202 296 10900591 10900689 4.190000e-28 135.0
12 TraesCS5D01G395000 chr5A 91.111 45 1 3 259 302 688962488 688962530 9.320000e-05 58.4
13 TraesCS5D01G395000 chr5A 87.755 49 3 3 259 305 25020079 25020126 1.000000e-03 54.7
14 TraesCS5D01G395000 chrUn 83.769 1072 88 47 389 1397 67088599 67087551 0.000000e+00 937.0
15 TraesCS5D01G395000 chrUn 83.721 1075 89 47 386 1397 307431032 307432083 0.000000e+00 937.0
16 TraesCS5D01G395000 chrUn 88.448 554 48 8 806 1352 199466153 199465609 0.000000e+00 654.0
17 TraesCS5D01G395000 chrUn 88.448 554 48 8 806 1352 343570593 343571137 0.000000e+00 654.0
18 TraesCS5D01G395000 chrUn 88.448 554 48 8 806 1352 343624505 343625049 0.000000e+00 654.0
19 TraesCS5D01G395000 chrUn 80.935 535 53 29 1378 1889 199465618 199465110 6.300000e-101 377.0
20 TraesCS5D01G395000 chrUn 80.899 534 53 29 1378 1888 343571128 343571635 2.270000e-100 375.0
21 TraesCS5D01G395000 chrUn 80.899 534 53 29 1378 1888 343625040 343625547 2.270000e-100 375.0
22 TraesCS5D01G395000 chrUn 85.382 301 33 9 1909 2203 10166467 10166762 3.900000e-78 302.0
23 TraesCS5D01G395000 chrUn 82.749 371 30 17 390 731 199466647 199466282 1.400000e-77 300.0
24 TraesCS5D01G395000 chrUn 82.749 371 30 17 390 731 343570099 343570464 1.400000e-77 300.0
25 TraesCS5D01G395000 chrUn 82.749 371 30 17 390 731 343624011 343624376 1.400000e-77 300.0
26 TraesCS5D01G395000 chrUn 80.829 193 22 8 6 197 343569810 343569988 1.160000e-28 137.0
27 TraesCS5D01G395000 chrUn 80.829 193 21 9 6 197 343623723 343623900 1.160000e-28 137.0
28 TraesCS5D01G395000 chrUn 76.842 190 27 11 4 192 338657947 338657774 9.190000e-15 91.6
29 TraesCS5D01G395000 chrUn 95.556 45 2 0 156 200 199466799 199466755 3.330000e-09 73.1
30 TraesCS5D01G395000 chrUn 97.436 39 1 0 336 374 67088672 67088634 1.550000e-07 67.6
31 TraesCS5D01G395000 chrUn 97.436 39 1 0 336 374 307430962 307431000 1.550000e-07 67.6
32 TraesCS5D01G395000 chr5B 86.946 858 74 26 386 1224 568844895 568845733 0.000000e+00 929.0
33 TraesCS5D01G395000 chr5B 88.989 554 45 7 806 1352 569224291 569224835 0.000000e+00 671.0
34 TraesCS5D01G395000 chr5B 88.448 554 48 8 806 1352 569103652 569104196 0.000000e+00 654.0
35 TraesCS5D01G395000 chr5B 80.804 547 53 30 1378 1901 569104187 569104704 4.870000e-102 381.0
36 TraesCS5D01G395000 chr5B 86.607 336 23 5 1220 1533 568846283 568846618 3.820000e-93 351.0
37 TraesCS5D01G395000 chr5B 92.478 226 9 4 1550 1768 568846876 568847100 1.390000e-82 316.0
38 TraesCS5D01G395000 chr5B 82.933 375 30 17 386 731 569223793 569224162 8.380000e-80 307.0
39 TraesCS5D01G395000 chr5B 82.749 371 30 17 390 731 569103158 569103523 1.400000e-77 300.0
40 TraesCS5D01G395000 chr5B 82.369 363 40 10 386 733 569140225 569140578 6.530000e-76 294.0
41 TraesCS5D01G395000 chr5B 82.369 363 40 10 386 733 569241401 569241754 6.530000e-76 294.0
42 TraesCS5D01G395000 chr5B 83.459 266 26 12 1646 1901 569225218 569225475 5.190000e-57 231.0
43 TraesCS5D01G395000 chr5B 84.444 135 15 2 2234 2362 569149150 569149284 7.010000e-26 128.0
44 TraesCS5D01G395000 chr5B 83.704 135 16 2 2234 2362 569250364 569250498 3.260000e-24 122.0
45 TraesCS5D01G395000 chr5B 77.005 187 26 11 4 189 569117166 569117336 9.190000e-15 91.6
46 TraesCS5D01G395000 chr5B 77.005 187 26 11 4 189 569134188 569134358 9.190000e-15 91.6
47 TraesCS5D01G395000 chr5B 93.750 48 3 0 150 197 569103000 569103047 3.330000e-09 73.1
48 TraesCS5D01G395000 chr5B 97.436 39 1 0 336 374 569223723 569223761 1.550000e-07 67.6
49 TraesCS5D01G395000 chr5B 94.872 39 2 0 336 374 568844820 568844858 7.210000e-06 62.1
50 TraesCS5D01G395000 chr7D 86.957 299 32 6 1909 2203 134841987 134842282 1.790000e-86 329.0
51 TraesCS5D01G395000 chr3A 85.906 298 39 3 1909 2203 251325312 251325609 5.010000e-82 315.0
52 TraesCS5D01G395000 chr2B 84.848 297 42 3 1910 2203 715925214 715925510 1.810000e-76 296.0
53 TraesCS5D01G395000 chr4B 84.385 301 40 6 1908 2203 479374642 479374940 3.040000e-74 289.0
54 TraesCS5D01G395000 chr3D 93.878 98 2 4 200 295 535978966 535978871 6.960000e-31 145.0
55 TraesCS5D01G395000 chr3D 91.176 102 2 4 202 296 434026375 434026476 5.420000e-27 132.0
56 TraesCS5D01G395000 chr1D 94.505 91 3 2 197 286 86902046 86902135 3.240000e-29 139.0
57 TraesCS5D01G395000 chr1B 92.079 101 4 4 192 289 95298208 95298307 3.240000e-29 139.0
58 TraesCS5D01G395000 chr7A 94.505 91 2 1 200 287 536770434 536770344 1.160000e-28 137.0
59 TraesCS5D01G395000 chr7A 88.000 50 4 2 258 306 90478822 90478870 9.320000e-05 58.4
60 TraesCS5D01G395000 chr6D 96.386 83 3 0 204 286 430139584 430139666 1.160000e-28 137.0
61 TraesCS5D01G395000 chr6A 93.617 94 2 1 204 293 612556351 612556444 1.160000e-28 137.0
62 TraesCS5D01G395000 chr2A 95.349 86 3 1 201 286 413323714 413323798 4.190000e-28 135.0
63 TraesCS5D01G395000 chr1A 83.019 159 17 3 406 554 559954113 559953955 4.190000e-28 135.0
64 TraesCS5D01G395000 chr1A 100.000 37 0 0 338 374 560044411 560044375 4.310000e-08 69.4
65 TraesCS5D01G395000 chr3B 88.889 45 3 2 259 301 554097723 554097767 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G395000 chr5D 462894668 462897081 2413 False 4458.000 4458 100.00000 1 2414 1 chr5D.!!$F4 2413
1 TraesCS5D01G395000 chr5D 462745741 462746811 1070 False 826.000 826 81.90100 386 1397 1 chr5D.!!$F3 1011
2 TraesCS5D01G395000 chr5D 462669074 462670004 930 False 699.000 699 81.81800 386 1243 1 chr5D.!!$F2 857
3 TraesCS5D01G395000 chr5A 582886578 582889922 3344 False 586.000 1009 83.83300 386 2369 2 chr5A.!!$F6 1983
4 TraesCS5D01G395000 chr5A 582652002 582653370 1368 False 475.500 795 81.25900 1 1397 2 chr5A.!!$F5 1396
5 TraesCS5D01G395000 chrUn 67087551 67088672 1121 True 502.300 937 90.60250 336 1397 2 chrUn.!!$R2 1061
6 TraesCS5D01G395000 chrUn 307430962 307432083 1121 False 502.300 937 90.57850 336 1397 2 chrUn.!!$F2 1061
7 TraesCS5D01G395000 chrUn 343569810 343571635 1825 False 366.500 654 83.23125 6 1888 4 chrUn.!!$F3 1882
8 TraesCS5D01G395000 chrUn 343623723 343625547 1824 False 366.500 654 83.23125 6 1888 4 chrUn.!!$F4 1882
9 TraesCS5D01G395000 chrUn 199465110 199466799 1689 True 351.025 654 86.92200 156 1889 4 chrUn.!!$R3 1733
10 TraesCS5D01G395000 chr5B 568844820 568847100 2280 False 414.525 929 90.22575 336 1768 4 chr5B.!!$F7 1432
11 TraesCS5D01G395000 chr5B 569103000 569104704 1704 False 352.025 654 86.43775 150 1901 4 chr5B.!!$F8 1751
12 TraesCS5D01G395000 chr5B 569223723 569225475 1752 False 319.150 671 88.20425 336 1901 4 chr5B.!!$F9 1565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
374 387 0.245539 CACATTGGCAGAAGCAAGGG 59.754 55.0 0.0 0.0 44.61 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 4534 0.037605 AGGAAAACGCGACGAGGAAT 60.038 50.0 15.93 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 28 9.747898 ATTGTAGAACCAGTCCAACAAAATATA 57.252 29.630 0.00 0.00 36.65 0.86
30 32 8.511604 AGAACCAGTCCAACAAAATATAGATG 57.488 34.615 0.00 0.00 0.00 2.90
34 36 8.906867 ACCAGTCCAACAAAATATAGATGAATG 58.093 33.333 0.00 0.00 0.00 2.67
35 37 7.864379 CCAGTCCAACAAAATATAGATGAATGC 59.136 37.037 0.00 0.00 0.00 3.56
47 52 9.881649 AATATAGATGAATGCGTAGAATCACAT 57.118 29.630 0.00 0.00 0.00 3.21
48 53 5.919272 AGATGAATGCGTAGAATCACATG 57.081 39.130 0.00 0.00 0.00 3.21
50 55 5.464722 AGATGAATGCGTAGAATCACATGAC 59.535 40.000 0.00 0.00 0.00 3.06
59 64 6.237728 GCGTAGAATCACATGACAAAATCGTA 60.238 38.462 0.00 0.00 0.00 3.43
70 75 8.514594 ACATGACAAAATCGTAATTCTGACAAT 58.485 29.630 0.00 0.00 0.00 2.71
75 80 8.783093 ACAAAATCGTAATTCTGACAATCTTGA 58.217 29.630 0.00 0.00 0.00 3.02
114 119 2.072487 ATCTCCACCACCATCGGGG 61.072 63.158 0.00 0.00 44.81 5.73
115 120 4.489771 CTCCACCACCATCGGGGC 62.490 72.222 0.00 0.00 42.05 5.80
122 127 1.752694 CACCATCGGGGCGGAAAAT 60.753 57.895 0.00 0.00 42.05 1.82
124 129 0.476771 ACCATCGGGGCGGAAAATAT 59.523 50.000 0.00 0.00 42.05 1.28
127 132 3.150767 CCATCGGGGCGGAAAATATAAA 58.849 45.455 0.00 0.00 0.00 1.40
128 133 3.761752 CCATCGGGGCGGAAAATATAAAT 59.238 43.478 0.00 0.00 0.00 1.40
129 134 4.142469 CCATCGGGGCGGAAAATATAAATC 60.142 45.833 0.00 0.00 0.00 2.17
140 145 7.190920 GGAAAATATAAATCCGTGGAGAGTG 57.809 40.000 0.00 0.00 0.00 3.51
141 146 6.293462 GGAAAATATAAATCCGTGGAGAGTGC 60.293 42.308 0.00 0.00 0.00 4.40
142 147 2.225068 ATAAATCCGTGGAGAGTGCG 57.775 50.000 0.00 0.00 0.00 5.34
143 148 0.459585 TAAATCCGTGGAGAGTGCGC 60.460 55.000 0.00 0.00 0.00 6.09
144 149 2.449031 AAATCCGTGGAGAGTGCGCA 62.449 55.000 5.66 5.66 0.00 6.09
145 150 3.649277 ATCCGTGGAGAGTGCGCAC 62.649 63.158 32.79 32.79 0.00 5.34
146 151 4.662961 CCGTGGAGAGTGCGCACA 62.663 66.667 39.21 18.38 0.00 4.57
147 152 3.108289 CGTGGAGAGTGCGCACAG 61.108 66.667 39.21 18.12 0.00 3.66
211 216 8.890410 TGTTTAGTTGACTATAAGTACTCCCT 57.110 34.615 0.00 0.00 0.00 4.20
212 217 8.964772 TGTTTAGTTGACTATAAGTACTCCCTC 58.035 37.037 0.00 0.00 0.00 4.30
213 218 9.187996 GTTTAGTTGACTATAAGTACTCCCTCT 57.812 37.037 0.00 0.00 0.00 3.69
214 219 8.749026 TTAGTTGACTATAAGTACTCCCTCTG 57.251 38.462 0.00 0.00 0.00 3.35
215 220 6.733509 AGTTGACTATAAGTACTCCCTCTGT 58.266 40.000 0.00 0.00 0.00 3.41
216 221 7.183460 AGTTGACTATAAGTACTCCCTCTGTT 58.817 38.462 0.00 0.00 0.00 3.16
217 222 7.339976 AGTTGACTATAAGTACTCCCTCTGTTC 59.660 40.741 0.00 0.00 0.00 3.18
218 223 6.127793 TGACTATAAGTACTCCCTCTGTTCC 58.872 44.000 0.00 0.00 0.00 3.62
219 224 6.088541 ACTATAAGTACTCCCTCTGTTCCA 57.911 41.667 0.00 0.00 0.00 3.53
220 225 6.500336 ACTATAAGTACTCCCTCTGTTCCAA 58.500 40.000 0.00 0.00 0.00 3.53
221 226 6.958192 ACTATAAGTACTCCCTCTGTTCCAAA 59.042 38.462 0.00 0.00 0.00 3.28
222 227 6.893020 ATAAGTACTCCCTCTGTTCCAAAT 57.107 37.500 0.00 0.00 0.00 2.32
223 228 5.584551 AAGTACTCCCTCTGTTCCAAATT 57.415 39.130 0.00 0.00 0.00 1.82
224 229 6.697641 AAGTACTCCCTCTGTTCCAAATTA 57.302 37.500 0.00 0.00 0.00 1.40
225 230 6.893020 AGTACTCCCTCTGTTCCAAATTAT 57.107 37.500 0.00 0.00 0.00 1.28
226 231 7.272144 AGTACTCCCTCTGTTCCAAATTATT 57.728 36.000 0.00 0.00 0.00 1.40
227 232 7.339482 AGTACTCCCTCTGTTCCAAATTATTC 58.661 38.462 0.00 0.00 0.00 1.75
228 233 5.186198 ACTCCCTCTGTTCCAAATTATTCG 58.814 41.667 0.00 0.00 0.00 3.34
229 234 5.174037 TCCCTCTGTTCCAAATTATTCGT 57.826 39.130 0.00 0.00 0.00 3.85
230 235 5.183228 TCCCTCTGTTCCAAATTATTCGTC 58.817 41.667 0.00 0.00 0.00 4.20
231 236 4.034048 CCCTCTGTTCCAAATTATTCGTCG 59.966 45.833 0.00 0.00 0.00 5.12
232 237 4.630069 CCTCTGTTCCAAATTATTCGTCGT 59.370 41.667 0.00 0.00 0.00 4.34
233 238 5.445939 CCTCTGTTCCAAATTATTCGTCGTG 60.446 44.000 0.00 0.00 0.00 4.35
234 239 4.390603 TCTGTTCCAAATTATTCGTCGTGG 59.609 41.667 0.00 0.00 0.00 4.94
235 240 4.066490 TGTTCCAAATTATTCGTCGTGGT 58.934 39.130 0.00 0.00 0.00 4.16
236 241 4.515944 TGTTCCAAATTATTCGTCGTGGTT 59.484 37.500 0.00 0.00 0.00 3.67
237 242 5.008811 TGTTCCAAATTATTCGTCGTGGTTT 59.991 36.000 0.00 0.00 0.00 3.27
238 243 5.692613 TCCAAATTATTCGTCGTGGTTTT 57.307 34.783 0.00 0.00 0.00 2.43
239 244 6.798315 TCCAAATTATTCGTCGTGGTTTTA 57.202 33.333 0.00 0.00 0.00 1.52
240 245 6.833839 TCCAAATTATTCGTCGTGGTTTTAG 58.166 36.000 0.00 0.00 0.00 1.85
241 246 6.427547 TCCAAATTATTCGTCGTGGTTTTAGT 59.572 34.615 0.00 0.00 0.00 2.24
242 247 7.041235 TCCAAATTATTCGTCGTGGTTTTAGTT 60.041 33.333 0.00 0.00 0.00 2.24
243 248 7.269724 CCAAATTATTCGTCGTGGTTTTAGTTC 59.730 37.037 0.00 0.00 0.00 3.01
244 249 7.424227 AATTATTCGTCGTGGTTTTAGTTCA 57.576 32.000 0.00 0.00 0.00 3.18
245 250 7.605410 ATTATTCGTCGTGGTTTTAGTTCAT 57.395 32.000 0.00 0.00 0.00 2.57
246 251 4.718858 TTCGTCGTGGTTTTAGTTCATG 57.281 40.909 0.00 0.00 0.00 3.07
247 252 3.979948 TCGTCGTGGTTTTAGTTCATGA 58.020 40.909 0.00 0.00 0.00 3.07
248 253 4.370049 TCGTCGTGGTTTTAGTTCATGAA 58.630 39.130 3.38 3.38 0.00 2.57
249 254 4.209703 TCGTCGTGGTTTTAGTTCATGAAC 59.790 41.667 27.69 27.69 41.45 3.18
262 267 4.451557 GTTCATGAACTAAAACCACGACG 58.548 43.478 27.66 0.00 38.25 5.12
263 268 3.979948 TCATGAACTAAAACCACGACGA 58.020 40.909 0.00 0.00 0.00 4.20
264 269 3.985279 TCATGAACTAAAACCACGACGAG 59.015 43.478 0.00 0.00 0.00 4.18
265 270 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
266 271 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
267 272 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
268 273 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
269 274 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
270 275 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
271 276 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
272 277 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
273 278 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
274 279 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
275 280 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
276 281 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
277 282 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
278 283 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
279 284 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
280 285 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
281 286 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
287 292 4.586306 AATTTGGAACGGAGGGAGTAAT 57.414 40.909 0.00 0.00 0.00 1.89
310 315 3.675467 CAAAACGTGCTTATCTAGGGC 57.325 47.619 0.00 0.00 0.00 5.19
311 316 3.006940 CAAAACGTGCTTATCTAGGGCA 58.993 45.455 0.00 0.00 0.00 5.36
313 318 1.776662 ACGTGCTTATCTAGGGCAGA 58.223 50.000 0.00 0.00 36.62 4.26
314 319 1.683917 ACGTGCTTATCTAGGGCAGAG 59.316 52.381 0.00 0.00 36.48 3.35
315 320 1.957177 CGTGCTTATCTAGGGCAGAGA 59.043 52.381 0.00 0.00 36.48 3.10
316 321 2.560542 CGTGCTTATCTAGGGCAGAGAT 59.439 50.000 5.79 5.79 36.48 2.75
317 322 3.759086 CGTGCTTATCTAGGGCAGAGATA 59.241 47.826 4.07 4.07 36.48 1.98
318 323 4.218635 CGTGCTTATCTAGGGCAGAGATAA 59.781 45.833 15.49 15.49 41.46 1.75
319 324 5.279006 CGTGCTTATCTAGGGCAGAGATAAA 60.279 44.000 16.49 5.41 42.51 1.40
320 325 6.573289 CGTGCTTATCTAGGGCAGAGATAAAT 60.573 42.308 16.49 0.00 42.51 1.40
321 326 7.164803 GTGCTTATCTAGGGCAGAGATAAATT 58.835 38.462 16.49 0.00 42.51 1.82
322 327 7.333174 GTGCTTATCTAGGGCAGAGATAAATTC 59.667 40.741 16.49 11.27 42.51 2.17
323 328 6.821160 GCTTATCTAGGGCAGAGATAAATTCC 59.179 42.308 16.49 6.63 42.51 3.01
324 329 7.310983 GCTTATCTAGGGCAGAGATAAATTCCT 60.311 40.741 16.49 0.00 42.51 3.36
325 330 6.619329 ATCTAGGGCAGAGATAAATTCCTC 57.381 41.667 0.00 0.00 36.48 3.71
326 331 3.760580 AGGGCAGAGATAAATTCCTCG 57.239 47.619 0.00 0.00 34.75 4.63
327 332 2.370189 AGGGCAGAGATAAATTCCTCGG 59.630 50.000 0.00 0.00 34.75 4.63
328 333 2.147150 GGCAGAGATAAATTCCTCGGC 58.853 52.381 14.50 14.50 45.47 5.54
329 334 1.795286 GCAGAGATAAATTCCTCGGCG 59.205 52.381 0.00 0.00 39.84 6.46
330 335 1.795286 CAGAGATAAATTCCTCGGCGC 59.205 52.381 0.00 0.00 34.75 6.53
331 336 1.412710 AGAGATAAATTCCTCGGCGCA 59.587 47.619 10.83 0.00 34.75 6.09
332 337 1.795286 GAGATAAATTCCTCGGCGCAG 59.205 52.381 10.83 5.07 0.00 5.18
374 387 0.245539 CACATTGGCAGAAGCAAGGG 59.754 55.000 0.00 0.00 44.61 3.95
375 388 0.901580 ACATTGGCAGAAGCAAGGGG 60.902 55.000 0.00 0.00 44.61 4.79
376 389 1.986210 ATTGGCAGAAGCAAGGGGC 60.986 57.895 0.00 0.00 44.61 5.80
397 436 0.320374 TTCCACTTGCACGTAGGGAG 59.680 55.000 0.00 0.00 0.00 4.30
439 479 3.772387 CCTGTGATCTAGGGCAGAGATA 58.228 50.000 10.18 0.00 36.48 1.98
480 531 4.020751 CCTCTGACTTGGAAGTGATCAAGA 60.021 45.833 0.00 0.00 41.94 3.02
530 604 7.427606 CGAAGTCATGAAATAGCAATCAAAGAC 59.572 37.037 0.00 0.00 36.09 3.01
570 644 1.135972 GCGCGCGGATATTTGATCATT 60.136 47.619 33.06 0.00 0.00 2.57
597 672 7.816031 AGTCCTCGACAAATTAAATTAGACGAA 59.184 33.333 0.00 0.00 34.60 3.85
598 673 8.108782 GTCCTCGACAAATTAAATTAGACGAAG 58.891 37.037 0.00 0.00 32.09 3.79
601 676 7.453034 TCGACAAATTAAATTAGACGAAGCAG 58.547 34.615 0.00 0.00 0.00 4.24
602 677 6.192863 CGACAAATTAAATTAGACGAAGCAGC 59.807 38.462 0.00 0.00 0.00 5.25
603 678 7.145932 ACAAATTAAATTAGACGAAGCAGCT 57.854 32.000 0.00 0.00 0.00 4.24
604 679 7.023575 ACAAATTAAATTAGACGAAGCAGCTG 58.976 34.615 10.11 10.11 0.00 4.24
639 721 2.631384 TCTTCTCATGTTCCCTTCCCA 58.369 47.619 0.00 0.00 0.00 4.37
679 764 1.429463 CGAGGAACAAGTAGTGCACC 58.571 55.000 14.63 0.00 0.00 5.01
718 803 6.013379 CCTGATGGAAATAGGAGTAGCTAGA 58.987 44.000 0.00 0.00 33.33 2.43
719 804 6.152661 CCTGATGGAAATAGGAGTAGCTAGAG 59.847 46.154 0.00 0.00 33.33 2.43
720 805 5.478679 TGATGGAAATAGGAGTAGCTAGAGC 59.521 44.000 0.00 0.00 42.49 4.09
734 841 1.654105 CTAGAGCGTAAACAGGCAACG 59.346 52.381 0.00 0.00 46.39 4.10
813 948 1.176527 CAAATTGTCCAGGTCGCCAT 58.823 50.000 0.00 0.00 0.00 4.40
815 950 0.327924 AATTGTCCAGGTCGCCATGA 59.672 50.000 0.00 0.00 0.00 3.07
940 1104 7.334171 CCTGATTCTTCTTCTTCTTCTTCTTCC 59.666 40.741 0.00 0.00 0.00 3.46
941 1105 7.739825 TGATTCTTCTTCTTCTTCTTCTTCCA 58.260 34.615 0.00 0.00 0.00 3.53
965 1136 3.655777 AGATTAACCAGTCCAAGAACCCA 59.344 43.478 0.00 0.00 0.00 4.51
979 1150 2.549064 AACCCACCGTGGTTAACTAC 57.451 50.000 16.55 11.81 46.70 2.73
1143 1323 0.739561 GCTCCGAGTCCGTCAAGTAT 59.260 55.000 0.00 0.00 0.00 2.12
1283 2017 2.190313 CCAGATGCTTAGGCGGCA 59.810 61.111 13.08 0.00 44.05 5.69
1330 2067 0.938008 CATCTCATCGTCCTCGTCGA 59.062 55.000 0.00 0.00 41.45 4.20
1429 2166 1.954382 TCTGAATATCTGGTCGGTCCG 59.046 52.381 4.39 4.39 39.52 4.79
1430 2167 1.954382 CTGAATATCTGGTCGGTCCGA 59.046 52.381 10.71 10.71 39.52 4.55
1491 2248 5.309323 TGCCTGGTTCTTTATTTTCATCG 57.691 39.130 0.00 0.00 0.00 3.84
1521 2284 0.320683 TCGGACGTACGTCTTCCTCA 60.321 55.000 38.47 18.74 44.04 3.86
1602 2608 3.146104 AGCTAAGCACAAGTGTTGGAT 57.854 42.857 1.79 0.00 34.12 3.41
1613 2619 6.363357 GCACAAGTGTTGGATTTCATTTCTAC 59.637 38.462 1.79 0.00 34.12 2.59
1630 2636 3.641648 TCTACGTGTAAGTTTTGGTCGG 58.358 45.455 0.00 0.00 0.00 4.79
1768 2919 1.576421 CCGAGCTGTTCTTGGCAAC 59.424 57.895 0.00 0.00 39.44 4.17
1773 2924 1.615392 AGCTGTTCTTGGCAACCAATC 59.385 47.619 0.00 0.00 43.07 2.67
1802 4522 0.807275 TCGGTGCAATCGATCTGCTG 60.807 55.000 23.54 16.67 40.59 4.41
1805 4525 0.247974 GTGCAATCGATCTGCTGTGC 60.248 55.000 23.54 17.83 40.59 4.57
1814 4534 3.750652 TCGATCTGCTGTGCAATTGTTTA 59.249 39.130 7.40 0.00 38.41 2.01
1830 4550 2.801679 TGTTTATTCCTCGTCGCGTTTT 59.198 40.909 5.77 0.00 0.00 2.43
1833 4553 0.037605 ATTCCTCGTCGCGTTTTCCT 60.038 50.000 5.77 0.00 0.00 3.36
1870 4595 0.614697 TGCTCCTGTTCTCGGGATGA 60.615 55.000 0.00 0.00 46.68 2.92
1904 4629 4.863131 CACCTCATCAGTTTTCTACCGTAC 59.137 45.833 0.00 0.00 0.00 3.67
1906 4631 5.103000 CCTCATCAGTTTTCTACCGTACAG 58.897 45.833 0.00 0.00 0.00 2.74
1907 4632 5.336531 CCTCATCAGTTTTCTACCGTACAGT 60.337 44.000 0.00 0.00 0.00 3.55
1908 4633 6.127814 CCTCATCAGTTTTCTACCGTACAGTA 60.128 42.308 0.00 0.00 0.00 2.74
1909 4634 7.218228 TCATCAGTTTTCTACCGTACAGTAA 57.782 36.000 0.00 0.00 0.00 2.24
1912 4637 8.767085 CATCAGTTTTCTACCGTACAGTAAAAA 58.233 33.333 0.00 0.55 0.00 1.94
1914 4639 7.981225 TCAGTTTTCTACCGTACAGTAAAAACT 59.019 33.333 21.31 21.31 40.00 2.66
1916 4641 6.529463 TTTCTACCGTACAGTAAAAACTGC 57.471 37.500 5.47 0.00 41.19 4.40
1917 4642 5.458041 TCTACCGTACAGTAAAAACTGCT 57.542 39.130 5.47 0.00 41.19 4.24
1918 4643 5.464168 TCTACCGTACAGTAAAAACTGCTC 58.536 41.667 5.47 0.00 41.19 4.26
1919 4644 3.396560 ACCGTACAGTAAAAACTGCTCC 58.603 45.455 5.47 0.00 41.19 4.70
1920 4645 2.410730 CCGTACAGTAAAAACTGCTCCG 59.589 50.000 5.47 5.53 41.19 4.63
1921 4646 2.410730 CGTACAGTAAAAACTGCTCCGG 59.589 50.000 0.00 0.00 41.19 5.14
1922 4647 1.892209 ACAGTAAAAACTGCTCCGGG 58.108 50.000 0.00 0.00 41.19 5.73
1923 4648 0.521735 CAGTAAAAACTGCTCCGGGC 59.478 55.000 0.00 4.52 42.22 6.13
1924 4649 0.953960 AGTAAAAACTGCTCCGGGCG 60.954 55.000 0.00 3.58 45.43 6.13
1926 4651 2.741486 TAAAAACTGCTCCGGGCGCT 62.741 55.000 7.64 0.00 45.43 5.92
1927 4652 2.741486 AAAAACTGCTCCGGGCGCTA 62.741 55.000 7.64 0.00 45.43 4.26
1928 4653 2.741486 AAAACTGCTCCGGGCGCTAA 62.741 55.000 7.64 0.00 45.43 3.09
1929 4654 3.952628 AACTGCTCCGGGCGCTAAC 62.953 63.158 7.64 0.00 45.43 2.34
1930 4655 4.451150 CTGCTCCGGGCGCTAACA 62.451 66.667 7.64 0.00 45.43 2.41
1931 4656 3.740128 CTGCTCCGGGCGCTAACAT 62.740 63.158 7.64 0.00 45.43 2.71
1932 4657 2.513897 GCTCCGGGCGCTAACATT 60.514 61.111 7.64 0.00 0.00 2.71
1934 4659 1.654023 GCTCCGGGCGCTAACATTTT 61.654 55.000 7.64 0.00 0.00 1.82
1935 4660 0.808755 CTCCGGGCGCTAACATTTTT 59.191 50.000 7.64 0.00 0.00 1.94
1936 4661 2.011222 CTCCGGGCGCTAACATTTTTA 58.989 47.619 7.64 0.00 0.00 1.52
1937 4662 2.420722 CTCCGGGCGCTAACATTTTTAA 59.579 45.455 7.64 0.00 0.00 1.52
1939 4664 3.444388 TCCGGGCGCTAACATTTTTAATT 59.556 39.130 7.64 0.00 0.00 1.40
1941 4666 4.627900 CCGGGCGCTAACATTTTTAATTTT 59.372 37.500 7.64 0.00 0.00 1.82
1942 4667 5.120986 CCGGGCGCTAACATTTTTAATTTTT 59.879 36.000 7.64 0.00 0.00 1.94
1944 4669 5.792962 GGGCGCTAACATTTTTAATTTTTGC 59.207 36.000 7.64 0.00 0.00 3.68
1945 4670 5.792962 GGCGCTAACATTTTTAATTTTTGCC 59.207 36.000 7.64 0.00 0.00 4.52
1947 4672 5.503033 CGCTAACATTTTTAATTTTTGCCGC 59.497 36.000 0.00 0.00 0.00 6.53
1948 4673 5.792962 GCTAACATTTTTAATTTTTGCCGCC 59.207 36.000 0.00 0.00 0.00 6.13
1949 4674 4.397064 ACATTTTTAATTTTTGCCGCCG 57.603 36.364 0.00 0.00 0.00 6.46
1950 4675 3.187432 ACATTTTTAATTTTTGCCGCCGG 59.813 39.130 0.00 0.00 0.00 6.13
1951 4676 2.814280 TTTTAATTTTTGCCGCCGGA 57.186 40.000 7.68 0.00 0.00 5.14
1953 4678 0.959553 TTAATTTTTGCCGCCGGACA 59.040 45.000 7.68 0.69 0.00 4.02
1954 4679 0.959553 TAATTTTTGCCGCCGGACAA 59.040 45.000 7.68 8.24 0.00 3.18
1955 4680 0.598942 AATTTTTGCCGCCGGACAAC 60.599 50.000 7.68 0.00 0.00 3.32
1962 4687 4.680237 CGCCGGACAACTCCAGCA 62.680 66.667 5.05 0.00 39.71 4.41
1963 4688 2.743928 GCCGGACAACTCCAGCAG 60.744 66.667 5.05 0.00 39.54 4.24
1964 4689 3.059982 CCGGACAACTCCAGCAGA 58.940 61.111 0.00 0.00 36.12 4.26
1965 4690 1.371183 CCGGACAACTCCAGCAGAA 59.629 57.895 0.00 0.00 36.12 3.02
1966 4691 0.671781 CCGGACAACTCCAGCAGAAG 60.672 60.000 0.00 0.00 36.12 2.85
1967 4692 1.294659 CGGACAACTCCAGCAGAAGC 61.295 60.000 0.00 0.00 36.12 3.86
1981 4706 3.674423 GCAGAAGCTGTAAAATAGTGCG 58.326 45.455 0.00 0.00 37.91 5.34
1982 4707 3.674423 CAGAAGCTGTAAAATAGTGCGC 58.326 45.455 0.00 0.00 0.00 6.09
1983 4708 2.348666 AGAAGCTGTAAAATAGTGCGCG 59.651 45.455 0.00 0.00 0.00 6.86
1984 4709 0.373716 AGCTGTAAAATAGTGCGCGC 59.626 50.000 27.26 27.26 0.00 6.86
1985 4710 0.919427 GCTGTAAAATAGTGCGCGCG 60.919 55.000 28.44 28.44 0.00 6.86
1986 4711 0.643310 CTGTAAAATAGTGCGCGCGA 59.357 50.000 37.18 16.49 0.00 5.87
1987 4712 1.059979 CTGTAAAATAGTGCGCGCGAA 59.940 47.619 37.18 24.32 0.00 4.70
1988 4713 1.459975 TGTAAAATAGTGCGCGCGAAA 59.540 42.857 37.18 18.82 0.00 3.46
1989 4714 2.096367 TGTAAAATAGTGCGCGCGAAAA 60.096 40.909 37.18 16.29 0.00 2.29
1990 4715 2.039327 AAAATAGTGCGCGCGAAAAA 57.961 40.000 37.18 15.85 0.00 1.94
2005 4730 4.639171 AAAAAGGTTGGGCGCGCG 62.639 61.111 28.44 28.44 0.00 6.86
2033 4758 7.675962 AAAAATGCTATCACATGTTGCAAAT 57.324 28.000 0.00 0.00 37.20 2.32
2034 4759 7.675962 AAAATGCTATCACATGTTGCAAATT 57.324 28.000 0.00 10.44 37.20 1.82
2035 4760 7.675962 AAATGCTATCACATGTTGCAAATTT 57.324 28.000 0.00 9.60 37.20 1.82
2036 4761 6.656314 ATGCTATCACATGTTGCAAATTTG 57.344 33.333 14.03 14.03 37.20 2.32
2037 4762 5.780984 TGCTATCACATGTTGCAAATTTGA 58.219 33.333 22.31 6.79 0.00 2.69
2038 4763 5.865013 TGCTATCACATGTTGCAAATTTGAG 59.135 36.000 22.31 6.56 0.00 3.02
2039 4764 5.290158 GCTATCACATGTTGCAAATTTGAGG 59.710 40.000 22.31 5.10 0.00 3.86
2040 4765 3.391965 TCACATGTTGCAAATTTGAGGC 58.608 40.909 22.31 7.20 0.00 4.70
2041 4766 2.156117 CACATGTTGCAAATTTGAGGCG 59.844 45.455 22.31 6.76 0.00 5.52
2042 4767 1.127213 CATGTTGCAAATTTGAGGCGC 59.873 47.619 22.31 0.00 0.00 6.53
2043 4768 0.599728 TGTTGCAAATTTGAGGCGCC 60.600 50.000 21.89 21.89 0.00 6.53
2044 4769 1.372748 TTGCAAATTTGAGGCGCCG 60.373 52.632 23.20 4.86 0.00 6.46
2045 4770 2.506881 GCAAATTTGAGGCGCCGG 60.507 61.111 23.20 0.00 0.00 6.13
2046 4771 2.988688 GCAAATTTGAGGCGCCGGA 61.989 57.895 23.20 8.86 0.00 5.14
2047 4772 1.809207 CAAATTTGAGGCGCCGGAT 59.191 52.632 23.20 10.90 0.00 4.18
2048 4773 0.173255 CAAATTTGAGGCGCCGGATT 59.827 50.000 23.20 16.29 0.00 3.01
2049 4774 0.173255 AAATTTGAGGCGCCGGATTG 59.827 50.000 23.20 0.00 0.00 2.67
2050 4775 2.283472 AATTTGAGGCGCCGGATTGC 62.283 55.000 23.20 5.21 0.00 3.56
2066 4791 2.800746 GCGCGCGCTTCACAATTT 60.801 55.556 44.38 0.00 38.26 1.82
2067 4792 1.511043 GCGCGCGCTTCACAATTTA 60.511 52.632 44.38 0.00 38.26 1.40
2068 4793 1.720330 GCGCGCGCTTCACAATTTAC 61.720 55.000 44.38 13.65 38.26 2.01
2069 4794 0.451957 CGCGCGCTTCACAATTTACA 60.452 50.000 30.48 0.00 0.00 2.41
2070 4795 0.974836 GCGCGCTTCACAATTTACAC 59.025 50.000 26.67 0.00 0.00 2.90
2071 4796 1.399727 GCGCGCTTCACAATTTACACT 60.400 47.619 26.67 0.00 0.00 3.55
2072 4797 2.233355 CGCGCTTCACAATTTACACTG 58.767 47.619 5.56 0.00 0.00 3.66
2073 4798 1.978782 GCGCTTCACAATTTACACTGC 59.021 47.619 0.00 0.00 0.00 4.40
2074 4799 2.604373 GCGCTTCACAATTTACACTGCA 60.604 45.455 0.00 0.00 0.00 4.41
2075 4800 3.825308 CGCTTCACAATTTACACTGCAT 58.175 40.909 0.00 0.00 0.00 3.96
2076 4801 4.229096 CGCTTCACAATTTACACTGCATT 58.771 39.130 0.00 0.00 0.00 3.56
2077 4802 4.681025 CGCTTCACAATTTACACTGCATTT 59.319 37.500 0.00 0.00 0.00 2.32
2078 4803 5.175491 CGCTTCACAATTTACACTGCATTTT 59.825 36.000 0.00 0.00 0.00 1.82
2079 4804 6.292274 CGCTTCACAATTTACACTGCATTTTT 60.292 34.615 0.00 0.00 0.00 1.94
2096 4821 4.913126 TTTTTGGGCGCGTGTTTT 57.087 44.444 8.43 0.00 0.00 2.43
2097 4822 2.666989 TTTTTGGGCGCGTGTTTTC 58.333 47.368 8.43 0.00 0.00 2.29
2098 4823 1.140407 TTTTTGGGCGCGTGTTTTCG 61.140 50.000 8.43 0.00 0.00 3.46
2099 4824 2.938539 TTTTGGGCGCGTGTTTTCGG 62.939 55.000 8.43 0.00 0.00 4.30
2104 4829 3.698463 CGCGTGTTTTCGGCGTCT 61.698 61.111 6.85 0.00 0.00 4.18
2105 4830 2.366584 CGCGTGTTTTCGGCGTCTA 61.367 57.895 6.85 0.00 0.00 2.59
2106 4831 1.414897 GCGTGTTTTCGGCGTCTAG 59.585 57.895 6.85 0.00 0.00 2.43
2107 4832 1.280206 GCGTGTTTTCGGCGTCTAGT 61.280 55.000 6.85 0.00 0.00 2.57
2108 4833 1.967762 CGTGTTTTCGGCGTCTAGTA 58.032 50.000 6.85 0.00 0.00 1.82
2109 4834 2.318578 CGTGTTTTCGGCGTCTAGTAA 58.681 47.619 6.85 0.00 0.00 2.24
2110 4835 2.725723 CGTGTTTTCGGCGTCTAGTAAA 59.274 45.455 6.85 0.00 0.00 2.01
2111 4836 3.181546 CGTGTTTTCGGCGTCTAGTAAAG 60.182 47.826 6.85 0.00 0.00 1.85
2112 4837 2.733026 TGTTTTCGGCGTCTAGTAAAGC 59.267 45.455 6.85 1.47 0.00 3.51
2113 4838 2.728690 TTTCGGCGTCTAGTAAAGCA 57.271 45.000 6.85 0.00 0.00 3.91
2114 4839 2.728690 TTCGGCGTCTAGTAAAGCAA 57.271 45.000 6.85 0.00 0.00 3.91
2115 4840 2.953466 TCGGCGTCTAGTAAAGCAAT 57.047 45.000 6.85 0.00 0.00 3.56
2116 4841 2.536365 TCGGCGTCTAGTAAAGCAATG 58.464 47.619 6.85 0.00 0.00 2.82
2117 4842 2.094390 TCGGCGTCTAGTAAAGCAATGT 60.094 45.455 6.85 0.00 0.00 2.71
2118 4843 2.671396 CGGCGTCTAGTAAAGCAATGTT 59.329 45.455 0.00 0.00 0.00 2.71
2119 4844 3.483574 CGGCGTCTAGTAAAGCAATGTTG 60.484 47.826 0.00 0.00 0.00 3.33
2120 4845 3.181510 GGCGTCTAGTAAAGCAATGTTGG 60.182 47.826 0.00 0.00 0.00 3.77
2121 4846 3.181510 GCGTCTAGTAAAGCAATGTTGGG 60.182 47.826 0.00 0.00 0.00 4.12
2122 4847 4.000988 CGTCTAGTAAAGCAATGTTGGGT 58.999 43.478 0.00 0.00 0.00 4.51
2123 4848 4.092968 CGTCTAGTAAAGCAATGTTGGGTC 59.907 45.833 0.00 0.00 0.00 4.46
2124 4849 4.395231 GTCTAGTAAAGCAATGTTGGGTCC 59.605 45.833 0.00 0.00 0.00 4.46
2125 4850 2.159382 AGTAAAGCAATGTTGGGTCCG 58.841 47.619 0.00 0.00 0.00 4.79
2126 4851 1.201414 GTAAAGCAATGTTGGGTCCGG 59.799 52.381 0.00 0.00 0.00 5.14
2127 4852 1.815817 AAAGCAATGTTGGGTCCGGC 61.816 55.000 0.00 0.00 0.00 6.13
2128 4853 4.114997 GCAATGTTGGGTCCGGCG 62.115 66.667 0.00 0.00 0.00 6.46
2129 4854 4.114997 CAATGTTGGGTCCGGCGC 62.115 66.667 0.00 0.00 0.00 6.53
2134 4859 4.311445 TTGGGTCCGGCGCGTTAA 62.311 61.111 8.43 0.00 0.00 2.01
2135 4860 3.821636 TTGGGTCCGGCGCGTTAAA 62.822 57.895 8.43 0.00 0.00 1.52
2136 4861 3.049074 GGGTCCGGCGCGTTAAAA 61.049 61.111 8.43 0.00 0.00 1.52
2137 4862 2.615387 GGGTCCGGCGCGTTAAAAA 61.615 57.895 8.43 0.00 0.00 1.94
2138 4863 1.503091 GGTCCGGCGCGTTAAAAAT 59.497 52.632 8.43 0.00 0.00 1.82
2139 4864 0.795358 GGTCCGGCGCGTTAAAAATG 60.795 55.000 8.43 0.00 0.00 2.32
2140 4865 1.154188 TCCGGCGCGTTAAAAATGC 60.154 52.632 8.43 0.00 40.02 3.56
2141 4866 1.154112 CCGGCGCGTTAAAAATGCT 60.154 52.632 8.43 0.00 41.25 3.79
2142 4867 0.097325 CCGGCGCGTTAAAAATGCTA 59.903 50.000 8.43 0.00 41.25 3.49
2143 4868 1.176838 CGGCGCGTTAAAAATGCTAC 58.823 50.000 8.43 0.00 41.25 3.58
2144 4869 1.464355 CGGCGCGTTAAAAATGCTACA 60.464 47.619 8.43 0.00 41.25 2.74
2145 4870 2.173964 GGCGCGTTAAAAATGCTACAG 58.826 47.619 8.43 0.00 41.25 2.74
2146 4871 2.413634 GGCGCGTTAAAAATGCTACAGT 60.414 45.455 8.43 0.00 41.25 3.55
2147 4872 2.588106 GCGCGTTAAAAATGCTACAGTG 59.412 45.455 8.43 0.00 41.25 3.66
2148 4873 3.160545 CGCGTTAAAAATGCTACAGTGG 58.839 45.455 0.00 0.00 41.25 4.00
2149 4874 2.914838 GCGTTAAAAATGCTACAGTGGC 59.085 45.455 0.99 0.99 40.27 5.01
2150 4875 3.160545 CGTTAAAAATGCTACAGTGGCG 58.839 45.455 4.21 0.00 0.00 5.69
2151 4876 2.911819 TAAAAATGCTACAGTGGCGC 57.088 45.000 0.00 0.00 0.00 6.53
2152 4877 0.109781 AAAAATGCTACAGTGGCGCG 60.110 50.000 0.00 0.00 0.00 6.86
2153 4878 2.527547 AAAATGCTACAGTGGCGCGC 62.528 55.000 25.94 25.94 0.00 6.86
2154 4879 3.958147 AATGCTACAGTGGCGCGCT 62.958 57.895 32.29 13.63 0.00 5.92
2155 4880 2.572095 AATGCTACAGTGGCGCGCTA 62.572 55.000 32.29 24.64 0.00 4.26
2156 4881 2.508439 GCTACAGTGGCGCGCTAA 60.508 61.111 32.29 17.34 0.00 3.09
2157 4882 2.098233 GCTACAGTGGCGCGCTAAA 61.098 57.895 32.29 14.50 0.00 1.85
2158 4883 1.632046 GCTACAGTGGCGCGCTAAAA 61.632 55.000 32.29 11.71 0.00 1.52
2159 4884 0.094730 CTACAGTGGCGCGCTAAAAC 59.905 55.000 32.29 22.40 0.00 2.43
2160 4885 0.320073 TACAGTGGCGCGCTAAAACT 60.320 50.000 32.29 24.17 0.00 2.66
2161 4886 0.320073 ACAGTGGCGCGCTAAAACTA 60.320 50.000 32.29 5.94 0.00 2.24
2162 4887 1.006832 CAGTGGCGCGCTAAAACTAT 58.993 50.000 32.29 4.36 0.00 2.12
2163 4888 1.396996 CAGTGGCGCGCTAAAACTATT 59.603 47.619 32.29 6.16 0.00 1.73
2164 4889 2.081462 AGTGGCGCGCTAAAACTATTT 58.919 42.857 32.29 5.82 0.00 1.40
2165 4890 2.486592 AGTGGCGCGCTAAAACTATTTT 59.513 40.909 32.29 5.46 36.67 1.82
2166 4891 3.685756 AGTGGCGCGCTAAAACTATTTTA 59.314 39.130 32.29 0.00 34.19 1.52
2181 4906 9.797556 AAAACTATTTTAGAGCACGAAACTTTT 57.202 25.926 0.00 0.00 0.00 2.27
2182 4907 8.782533 AACTATTTTAGAGCACGAAACTTTTG 57.217 30.769 0.00 0.00 0.00 2.44
2183 4908 7.927048 ACTATTTTAGAGCACGAAACTTTTGT 58.073 30.769 0.00 0.00 0.00 2.83
2184 4909 7.855904 ACTATTTTAGAGCACGAAACTTTTGTG 59.144 33.333 15.23 15.23 36.70 3.33
2188 4913 2.203599 CACGAAACTTTTGTGCGCC 58.796 52.632 4.18 0.00 35.40 6.53
2189 4914 0.248458 CACGAAACTTTTGTGCGCCT 60.248 50.000 4.18 0.00 35.40 5.52
2190 4915 0.248458 ACGAAACTTTTGTGCGCCTG 60.248 50.000 4.18 0.00 35.40 4.85
2191 4916 0.248458 CGAAACTTTTGTGCGCCTGT 60.248 50.000 4.18 0.00 0.00 4.00
2192 4917 1.797348 CGAAACTTTTGTGCGCCTGTT 60.797 47.619 4.18 0.00 0.00 3.16
2193 4918 1.587946 GAAACTTTTGTGCGCCTGTTG 59.412 47.619 4.18 0.00 0.00 3.33
2194 4919 0.179113 AACTTTTGTGCGCCTGTTGG 60.179 50.000 4.18 0.00 0.00 3.77
2195 4920 1.034838 ACTTTTGTGCGCCTGTTGGA 61.035 50.000 4.18 0.00 34.57 3.53
2196 4921 0.318107 CTTTTGTGCGCCTGTTGGAG 60.318 55.000 4.18 0.00 36.16 3.86
2197 4922 0.749818 TTTTGTGCGCCTGTTGGAGA 60.750 50.000 4.18 0.00 34.95 3.71
2198 4923 0.537143 TTTGTGCGCCTGTTGGAGAT 60.537 50.000 4.18 0.00 34.95 2.75
2199 4924 1.236616 TTGTGCGCCTGTTGGAGATG 61.237 55.000 4.18 0.00 34.95 2.90
2200 4925 2.747460 TGCGCCTGTTGGAGATGC 60.747 61.111 4.18 0.00 34.95 3.91
2201 4926 2.437359 GCGCCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 34.95 3.79
2202 4927 2.467826 GCGCCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 34.95 4.26
2218 4943 1.208776 TGCTCACATGAGAGGGTGATG 59.791 52.381 19.90 0.00 44.74 3.07
2219 4944 1.950828 CTCACATGAGAGGGTGATGC 58.049 55.000 11.93 0.00 44.74 3.91
2223 4950 0.545171 CATGAGAGGGTGATGCTGGT 59.455 55.000 0.00 0.00 0.00 4.00
2228 4955 2.821366 GGGTGATGCTGGTGCTCG 60.821 66.667 0.00 0.00 40.48 5.03
2229 4956 2.265739 GGTGATGCTGGTGCTCGA 59.734 61.111 0.00 0.00 40.48 4.04
2230 4957 1.153289 GGTGATGCTGGTGCTCGAT 60.153 57.895 0.00 0.00 40.48 3.59
2243 4970 4.192317 GGTGCTCGATAGTGGAGAATTTT 58.808 43.478 0.00 0.00 33.27 1.82
2245 4972 4.631813 GTGCTCGATAGTGGAGAATTTTGT 59.368 41.667 0.00 0.00 33.27 2.83
2247 4974 5.705441 TGCTCGATAGTGGAGAATTTTGTTT 59.295 36.000 0.00 0.00 33.27 2.83
2252 4979 9.667107 TCGATAGTGGAGAATTTTGTTTAGATT 57.333 29.630 0.00 0.00 37.40 2.40
2276 5003 6.759497 ATTAATGGAAGAAAGTTTCTCCCG 57.241 37.500 18.28 0.00 39.61 5.14
2277 5004 3.790089 ATGGAAGAAAGTTTCTCCCGT 57.210 42.857 18.28 13.98 39.61 5.28
2278 5005 2.846193 TGGAAGAAAGTTTCTCCCGTG 58.154 47.619 18.28 0.00 39.61 4.94
2282 5014 3.570912 AGAAAGTTTCTCCCGTGGAAA 57.429 42.857 12.50 0.00 34.07 3.13
2283 5015 3.893521 AGAAAGTTTCTCCCGTGGAAAA 58.106 40.909 12.50 0.00 34.07 2.29
2292 5024 1.418264 TCCCGTGGAAAATGTGAGTCA 59.582 47.619 0.00 0.00 0.00 3.41
2300 5033 3.888930 GGAAAATGTGAGTCACCCAAGAA 59.111 43.478 20.43 0.78 32.73 2.52
2307 5040 4.141597 TGTGAGTCACCCAAGAATTGTGTA 60.142 41.667 20.43 0.00 33.33 2.90
2339 5072 1.307097 GTCTGATAGACGTACGCCCT 58.693 55.000 16.72 15.07 35.28 5.19
2351 5084 4.568956 ACGTACGCCCTAAATACAAAAGT 58.431 39.130 16.72 0.00 0.00 2.66
2353 5086 6.162777 ACGTACGCCCTAAATACAAAAGTTA 58.837 36.000 16.72 0.00 0.00 2.24
2358 5091 5.163602 CGCCCTAAATACAAAAGTTATGGCA 60.164 40.000 10.55 0.00 38.00 4.92
2369 5102 5.779529 AAAGTTATGGCATGCATCTTAGG 57.220 39.130 21.36 0.00 0.00 2.69
2370 5103 4.443978 AGTTATGGCATGCATCTTAGGT 57.556 40.909 21.36 0.00 0.00 3.08
2371 5104 4.392940 AGTTATGGCATGCATCTTAGGTC 58.607 43.478 21.36 0.00 0.00 3.85
2372 5105 4.103785 AGTTATGGCATGCATCTTAGGTCT 59.896 41.667 21.36 2.86 0.00 3.85
2373 5106 3.589951 ATGGCATGCATCTTAGGTCTT 57.410 42.857 21.36 0.00 0.00 3.01
2374 5107 4.712051 ATGGCATGCATCTTAGGTCTTA 57.288 40.909 21.36 0.00 0.00 2.10
2375 5108 4.077300 TGGCATGCATCTTAGGTCTTAG 57.923 45.455 21.36 0.00 0.00 2.18
2376 5109 2.810852 GGCATGCATCTTAGGTCTTAGC 59.189 50.000 21.36 0.00 0.00 3.09
2377 5110 3.495806 GGCATGCATCTTAGGTCTTAGCT 60.496 47.826 21.36 0.00 0.00 3.32
2378 5111 4.133078 GCATGCATCTTAGGTCTTAGCTT 58.867 43.478 14.21 0.00 0.00 3.74
2379 5112 4.024218 GCATGCATCTTAGGTCTTAGCTTG 60.024 45.833 14.21 0.00 0.00 4.01
2380 5113 5.363101 CATGCATCTTAGGTCTTAGCTTGA 58.637 41.667 0.00 0.00 0.00 3.02
2381 5114 4.759782 TGCATCTTAGGTCTTAGCTTGAC 58.240 43.478 10.08 10.08 0.00 3.18
2387 5120 2.861147 GGTCTTAGCTTGACCCTTGT 57.139 50.000 21.27 0.00 46.01 3.16
2388 5121 3.141767 GGTCTTAGCTTGACCCTTGTT 57.858 47.619 21.27 0.00 46.01 2.83
2389 5122 2.814336 GGTCTTAGCTTGACCCTTGTTG 59.186 50.000 21.27 0.00 46.01 3.33
2390 5123 2.814336 GTCTTAGCTTGACCCTTGTTGG 59.186 50.000 0.00 0.00 0.00 3.77
2391 5124 1.541588 CTTAGCTTGACCCTTGTTGGC 59.458 52.381 0.00 0.00 0.00 4.52
2392 5125 0.771127 TAGCTTGACCCTTGTTGGCT 59.229 50.000 0.00 0.00 0.00 4.75
2393 5126 0.771127 AGCTTGACCCTTGTTGGCTA 59.229 50.000 0.00 0.00 0.00 3.93
2394 5127 0.881796 GCTTGACCCTTGTTGGCTAC 59.118 55.000 0.00 0.00 0.00 3.58
2395 5128 1.156736 CTTGACCCTTGTTGGCTACG 58.843 55.000 0.00 0.00 0.00 3.51
2396 5129 0.759959 TTGACCCTTGTTGGCTACGA 59.240 50.000 0.00 0.00 0.00 3.43
2397 5130 0.759959 TGACCCTTGTTGGCTACGAA 59.240 50.000 0.00 0.00 0.00 3.85
2398 5131 1.349688 TGACCCTTGTTGGCTACGAAT 59.650 47.619 0.00 0.00 0.00 3.34
2399 5132 1.737793 GACCCTTGTTGGCTACGAATG 59.262 52.381 0.00 0.00 0.00 2.67
2400 5133 1.094785 CCCTTGTTGGCTACGAATGG 58.905 55.000 0.00 0.00 0.00 3.16
2401 5134 1.339631 CCCTTGTTGGCTACGAATGGA 60.340 52.381 0.00 0.00 0.00 3.41
2402 5135 1.737793 CCTTGTTGGCTACGAATGGAC 59.262 52.381 0.00 0.00 0.00 4.02
2403 5136 1.393539 CTTGTTGGCTACGAATGGACG 59.606 52.381 0.00 0.00 39.31 4.79
2404 5137 1.017177 TGTTGGCTACGAATGGACGC 61.017 55.000 0.00 0.00 36.70 5.19
2405 5138 1.807981 TTGGCTACGAATGGACGCG 60.808 57.895 3.53 3.53 36.70 6.01
2406 5139 3.627218 GGCTACGAATGGACGCGC 61.627 66.667 5.73 0.00 36.70 6.86
2407 5140 2.582498 GCTACGAATGGACGCGCT 60.582 61.111 5.73 0.00 36.70 5.92
2408 5141 2.165301 GCTACGAATGGACGCGCTT 61.165 57.895 5.73 0.00 36.70 4.68
2409 5142 0.868602 GCTACGAATGGACGCGCTTA 60.869 55.000 5.73 0.00 36.70 3.09
2410 5143 1.121240 CTACGAATGGACGCGCTTAG 58.879 55.000 5.73 0.00 36.70 2.18
2411 5144 0.248743 TACGAATGGACGCGCTTAGG 60.249 55.000 5.73 0.00 36.70 2.69
2412 5145 1.226859 CGAATGGACGCGCTTAGGA 60.227 57.895 5.73 0.00 0.00 2.94
2413 5146 0.804544 CGAATGGACGCGCTTAGGAA 60.805 55.000 5.73 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 7.864379 GCATTCATCTATATTTTGTTGGACTGG 59.136 37.037 0.00 0.00 0.00 4.00
26 28 5.464722 GTCATGTGATTCTACGCATTCATCT 59.535 40.000 0.00 0.00 38.66 2.90
30 32 5.469373 TTGTCATGTGATTCTACGCATTC 57.531 39.130 0.00 0.00 38.66 2.67
34 36 4.957967 CGATTTTGTCATGTGATTCTACGC 59.042 41.667 0.00 0.00 0.00 4.42
35 37 6.094739 ACGATTTTGTCATGTGATTCTACG 57.905 37.500 0.00 0.00 0.00 3.51
47 52 8.322906 AGATTGTCAGAATTACGATTTTGTCA 57.677 30.769 0.00 0.00 31.27 3.58
48 53 9.055248 CAAGATTGTCAGAATTACGATTTTGTC 57.945 33.333 0.00 0.00 32.26 3.18
50 55 9.778993 ATCAAGATTGTCAGAATTACGATTTTG 57.221 29.630 0.00 4.85 35.58 2.44
59 64 4.574013 GCCGAGATCAAGATTGTCAGAATT 59.426 41.667 0.00 0.00 0.00 2.17
70 75 1.683917 GGAGCTTAGCCGAGATCAAGA 59.316 52.381 0.00 0.00 33.83 3.02
75 80 0.187361 AGGAGGAGCTTAGCCGAGAT 59.813 55.000 0.00 0.00 0.00 2.75
122 127 2.545113 GCGCACTCTCCACGGATTTATA 60.545 50.000 0.30 0.00 0.00 0.98
124 129 0.459585 GCGCACTCTCCACGGATTTA 60.460 55.000 0.30 0.00 0.00 1.40
127 132 3.381983 TGCGCACTCTCCACGGAT 61.382 61.111 5.66 0.00 0.00 4.18
128 133 4.357947 GTGCGCACTCTCCACGGA 62.358 66.667 32.55 0.00 0.00 4.69
129 134 4.662961 TGTGCGCACTCTCCACGG 62.663 66.667 37.59 0.00 32.32 4.94
131 136 3.418068 GCTGTGCGCACTCTCCAC 61.418 66.667 37.59 18.24 38.92 4.02
133 138 3.117171 CAGCTGTGCGCACTCTCC 61.117 66.667 37.59 22.99 42.61 3.71
143 148 2.686558 ATTTTGTGTACGCAGCTGTG 57.313 45.000 25.37 25.37 0.00 3.66
144 149 4.435518 CGATTATTTTGTGTACGCAGCTGT 60.436 41.667 16.64 0.00 0.00 4.40
145 150 4.021822 CGATTATTTTGTGTACGCAGCTG 58.978 43.478 10.11 10.11 0.00 4.24
146 151 3.063452 CCGATTATTTTGTGTACGCAGCT 59.937 43.478 9.41 1.38 0.00 4.24
147 152 3.350912 CCGATTATTTTGTGTACGCAGC 58.649 45.455 9.41 0.00 0.00 5.25
148 153 3.063452 AGCCGATTATTTTGTGTACGCAG 59.937 43.478 9.41 0.00 0.00 5.18
152 157 6.358118 TCATCAGCCGATTATTTTGTGTAC 57.642 37.500 0.00 0.00 0.00 2.90
206 211 5.186198 ACGAATAATTTGGAACAGAGGGAG 58.814 41.667 0.00 0.00 42.39 4.30
207 212 5.174037 ACGAATAATTTGGAACAGAGGGA 57.826 39.130 0.00 0.00 42.39 4.20
208 213 4.034048 CGACGAATAATTTGGAACAGAGGG 59.966 45.833 0.00 0.00 42.39 4.30
209 214 4.630069 ACGACGAATAATTTGGAACAGAGG 59.370 41.667 0.00 0.00 42.39 3.69
210 215 5.445939 CCACGACGAATAATTTGGAACAGAG 60.446 44.000 0.00 0.00 42.39 3.35
211 216 4.390603 CCACGACGAATAATTTGGAACAGA 59.609 41.667 0.00 0.00 42.39 3.41
212 217 4.153475 ACCACGACGAATAATTTGGAACAG 59.847 41.667 0.00 0.00 42.39 3.16
213 218 4.066490 ACCACGACGAATAATTTGGAACA 58.934 39.130 0.00 0.00 0.00 3.18
214 219 4.673534 ACCACGACGAATAATTTGGAAC 57.326 40.909 0.00 0.00 0.00 3.62
215 220 5.692613 AAACCACGACGAATAATTTGGAA 57.307 34.783 0.00 0.00 0.00 3.53
216 221 5.692613 AAAACCACGACGAATAATTTGGA 57.307 34.783 0.00 0.00 0.00 3.53
217 222 6.604930 ACTAAAACCACGACGAATAATTTGG 58.395 36.000 0.00 0.00 0.00 3.28
218 223 7.799447 TGAACTAAAACCACGACGAATAATTTG 59.201 33.333 0.00 0.00 0.00 2.32
219 224 7.863666 TGAACTAAAACCACGACGAATAATTT 58.136 30.769 0.00 0.00 0.00 1.82
220 225 7.424227 TGAACTAAAACCACGACGAATAATT 57.576 32.000 0.00 0.00 0.00 1.40
221 226 7.332430 TCATGAACTAAAACCACGACGAATAAT 59.668 33.333 0.00 0.00 0.00 1.28
222 227 6.645827 TCATGAACTAAAACCACGACGAATAA 59.354 34.615 0.00 0.00 0.00 1.40
223 228 6.157904 TCATGAACTAAAACCACGACGAATA 58.842 36.000 0.00 0.00 0.00 1.75
224 229 4.992319 TCATGAACTAAAACCACGACGAAT 59.008 37.500 0.00 0.00 0.00 3.34
225 230 4.370049 TCATGAACTAAAACCACGACGAA 58.630 39.130 0.00 0.00 0.00 3.85
226 231 3.979948 TCATGAACTAAAACCACGACGA 58.020 40.909 0.00 0.00 0.00 4.20
227 232 4.451557 GTTCATGAACTAAAACCACGACG 58.548 43.478 27.66 0.00 38.25 5.12
240 245 4.209703 TCGTCGTGGTTTTAGTTCATGAAC 59.790 41.667 27.69 27.69 41.45 3.18
241 246 4.370049 TCGTCGTGGTTTTAGTTCATGAA 58.630 39.130 3.38 3.38 0.00 2.57
242 247 3.979948 TCGTCGTGGTTTTAGTTCATGA 58.020 40.909 0.00 0.00 0.00 3.07
243 248 3.739300 ACTCGTCGTGGTTTTAGTTCATG 59.261 43.478 0.00 0.00 0.00 3.07
244 249 3.986277 ACTCGTCGTGGTTTTAGTTCAT 58.014 40.909 0.00 0.00 0.00 2.57
245 250 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
246 251 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
247 252 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
248 253 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
249 254 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
250 255 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
251 256 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
252 257 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
253 258 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
254 259 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
255 260 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
256 261 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
257 262 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
258 263 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
259 264 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
260 265 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
261 266 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
262 267 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
263 268 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
264 269 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
265 270 5.703730 ATTACTCCCTCCGTTCCAAATTA 57.296 39.130 0.00 0.00 0.00 1.40
266 271 4.586306 ATTACTCCCTCCGTTCCAAATT 57.414 40.909 0.00 0.00 0.00 1.82
267 272 4.444449 GCTATTACTCCCTCCGTTCCAAAT 60.444 45.833 0.00 0.00 0.00 2.32
268 273 3.118519 GCTATTACTCCCTCCGTTCCAAA 60.119 47.826 0.00 0.00 0.00 3.28
269 274 2.433239 GCTATTACTCCCTCCGTTCCAA 59.567 50.000 0.00 0.00 0.00 3.53
270 275 2.037144 GCTATTACTCCCTCCGTTCCA 58.963 52.381 0.00 0.00 0.00 3.53
271 276 2.037144 TGCTATTACTCCCTCCGTTCC 58.963 52.381 0.00 0.00 0.00 3.62
272 277 3.814005 TTGCTATTACTCCCTCCGTTC 57.186 47.619 0.00 0.00 0.00 3.95
273 278 4.259356 GTTTTGCTATTACTCCCTCCGTT 58.741 43.478 0.00 0.00 0.00 4.44
274 279 3.677976 CGTTTTGCTATTACTCCCTCCGT 60.678 47.826 0.00 0.00 0.00 4.69
275 280 2.864343 CGTTTTGCTATTACTCCCTCCG 59.136 50.000 0.00 0.00 0.00 4.63
276 281 3.621715 CACGTTTTGCTATTACTCCCTCC 59.378 47.826 0.00 0.00 0.00 4.30
277 282 4.859629 CACGTTTTGCTATTACTCCCTC 57.140 45.455 0.00 0.00 0.00 4.30
305 310 3.578716 CCGAGGAATTTATCTCTGCCCTA 59.421 47.826 0.00 0.00 0.00 3.53
307 312 2.772287 CCGAGGAATTTATCTCTGCCC 58.228 52.381 0.00 0.00 0.00 5.36
309 314 1.795286 CGCCGAGGAATTTATCTCTGC 59.205 52.381 0.00 9.21 37.05 4.26
310 315 1.795286 GCGCCGAGGAATTTATCTCTG 59.205 52.381 0.00 0.00 0.00 3.35
311 316 1.412710 TGCGCCGAGGAATTTATCTCT 59.587 47.619 4.18 0.00 0.00 3.10
313 318 1.871080 CTGCGCCGAGGAATTTATCT 58.129 50.000 4.18 0.00 0.00 1.98
314 319 0.235926 GCTGCGCCGAGGAATTTATC 59.764 55.000 4.18 0.00 0.00 1.75
315 320 0.463654 TGCTGCGCCGAGGAATTTAT 60.464 50.000 4.18 0.00 0.00 1.40
316 321 1.078778 TGCTGCGCCGAGGAATTTA 60.079 52.632 4.18 0.00 0.00 1.40
317 322 2.359850 TGCTGCGCCGAGGAATTT 60.360 55.556 4.18 0.00 0.00 1.82
318 323 3.127533 GTGCTGCGCCGAGGAATT 61.128 61.111 4.18 0.00 0.00 2.17
319 324 3.687321 ATGTGCTGCGCCGAGGAAT 62.687 57.895 11.12 0.00 0.00 3.01
320 325 2.514510 TAATGTGCTGCGCCGAGGAA 62.515 55.000 11.12 0.00 0.00 3.36
321 326 2.906182 CTAATGTGCTGCGCCGAGGA 62.906 60.000 11.12 0.00 0.00 3.71
322 327 2.511373 TAATGTGCTGCGCCGAGG 60.511 61.111 11.12 0.00 0.00 4.63
323 328 1.361668 AACTAATGTGCTGCGCCGAG 61.362 55.000 11.12 7.55 0.00 4.63
324 329 0.108567 TAACTAATGTGCTGCGCCGA 60.109 50.000 11.12 0.00 0.00 5.54
325 330 0.301687 CTAACTAATGTGCTGCGCCG 59.698 55.000 11.12 0.00 0.00 6.46
326 331 0.657840 CCTAACTAATGTGCTGCGCC 59.342 55.000 11.12 0.00 0.00 6.53
327 332 1.369625 ACCTAACTAATGTGCTGCGC 58.630 50.000 6.19 6.19 0.00 6.09
328 333 2.351726 GGAACCTAACTAATGTGCTGCG 59.648 50.000 0.00 0.00 0.00 5.18
329 334 3.127030 GTGGAACCTAACTAATGTGCTGC 59.873 47.826 0.00 0.00 0.00 5.25
330 335 4.579869 AGTGGAACCTAACTAATGTGCTG 58.420 43.478 0.00 0.00 37.80 4.41
331 336 4.910458 AGTGGAACCTAACTAATGTGCT 57.090 40.909 0.00 0.00 37.80 4.40
332 337 4.379499 GCAAGTGGAACCTAACTAATGTGC 60.379 45.833 0.00 0.00 37.80 4.57
333 338 4.759693 TGCAAGTGGAACCTAACTAATGTG 59.240 41.667 0.00 0.00 37.80 3.21
334 339 4.760204 GTGCAAGTGGAACCTAACTAATGT 59.240 41.667 0.00 0.00 37.80 2.71
374 387 1.897398 CTACGTGCAAGTGGAACGCC 61.897 60.000 15.96 0.00 45.86 5.68
375 388 1.491563 CTACGTGCAAGTGGAACGC 59.508 57.895 15.96 0.00 45.86 4.84
376 389 1.289109 CCCTACGTGCAAGTGGAACG 61.289 60.000 17.27 0.00 45.86 3.95
378 391 0.320374 CTCCCTACGTGCAAGTGGAA 59.680 55.000 17.27 4.63 0.00 3.53
379 392 1.972198 CTCCCTACGTGCAAGTGGA 59.028 57.895 17.27 13.63 0.00 4.02
382 395 2.172483 CTGGCTCCCTACGTGCAAGT 62.172 60.000 10.83 10.83 32.41 3.16
383 396 1.448540 CTGGCTCCCTACGTGCAAG 60.449 63.158 0.00 0.00 32.41 4.01
384 397 2.662596 CTGGCTCCCTACGTGCAA 59.337 61.111 0.00 0.00 32.41 4.08
387 426 2.185350 CAGCTGGCTCCCTACGTG 59.815 66.667 5.57 0.00 0.00 4.49
439 479 2.359850 TGCTGCGCGGAGGAATTT 60.360 55.556 29.18 0.00 0.00 1.82
457 508 3.969287 TGATCACTTCCAAGTCAGAGG 57.031 47.619 0.00 0.00 37.08 3.69
487 538 9.793252 CATGACTTCGATGATGTATCATGTATA 57.207 33.333 11.81 0.00 46.84 1.47
489 540 7.885297 TCATGACTTCGATGATGTATCATGTA 58.115 34.615 19.41 10.15 46.84 2.29
497 548 6.051074 TGCTATTTCATGACTTCGATGATGT 58.949 36.000 5.16 0.00 29.96 3.06
498 549 6.535274 TGCTATTTCATGACTTCGATGATG 57.465 37.500 5.16 0.00 29.96 3.07
530 604 3.001330 CGCTTTAGTCTTTGAATAGGCCG 59.999 47.826 0.00 0.00 0.00 6.13
570 644 8.461222 TCGTCTAATTTAATTTGTCGAGGACTA 58.539 33.333 14.13 0.00 33.10 2.59
598 673 2.042831 ATTTCGTCCAGCCAGCTGC 61.043 57.895 14.26 3.91 42.35 5.25
601 676 0.169009 GAACATTTCGTCCAGCCAGC 59.831 55.000 0.00 0.00 0.00 4.85
602 677 1.813513 AGAACATTTCGTCCAGCCAG 58.186 50.000 0.00 0.00 34.02 4.85
603 678 2.151202 GAAGAACATTTCGTCCAGCCA 58.849 47.619 0.00 0.00 32.94 4.75
604 679 2.416893 GAGAAGAACATTTCGTCCAGCC 59.583 50.000 0.00 0.00 38.68 4.85
639 721 3.447229 CGCCTGGTTTAATTTTCCCTGAT 59.553 43.478 0.00 0.00 0.00 2.90
646 728 3.892588 TGTTCCTCGCCTGGTTTAATTTT 59.107 39.130 0.00 0.00 0.00 1.82
679 764 3.384668 CATCAGGGTTCTACGTATGCTG 58.615 50.000 0.00 0.00 0.00 4.41
691 776 4.103311 GCTACTCCTATTTCCATCAGGGTT 59.897 45.833 0.00 0.00 38.11 4.11
693 778 3.906846 AGCTACTCCTATTTCCATCAGGG 59.093 47.826 0.00 0.00 34.83 4.45
720 805 1.440353 GCTGCGTTGCCTGTTTACG 60.440 57.895 0.00 0.00 38.26 3.18
721 806 0.240945 ATGCTGCGTTGCCTGTTTAC 59.759 50.000 0.00 0.00 0.00 2.01
722 807 0.240678 CATGCTGCGTTGCCTGTTTA 59.759 50.000 0.00 0.00 0.00 2.01
734 841 3.755628 CCAGGTGTGGCATGCTGC 61.756 66.667 18.92 11.17 44.08 5.25
804 939 0.976641 TCTCTTTGTCATGGCGACCT 59.023 50.000 0.00 0.00 44.71 3.85
813 948 2.289694 GGCACCTTAGCTCTCTTTGTCA 60.290 50.000 0.00 0.00 34.17 3.58
815 950 2.481289 GGCACCTTAGCTCTCTTTGT 57.519 50.000 0.00 0.00 34.17 2.83
940 1104 4.938226 GGTTCTTGGACTGGTTAATCTCTG 59.062 45.833 0.00 0.00 0.00 3.35
941 1105 4.019231 GGGTTCTTGGACTGGTTAATCTCT 60.019 45.833 0.00 0.00 0.00 3.10
974 1145 7.341256 TGTCTAGTTTGGAATAGATCGGTAGTT 59.659 37.037 0.00 0.00 31.05 2.24
975 1146 6.832384 TGTCTAGTTTGGAATAGATCGGTAGT 59.168 38.462 0.00 0.00 31.05 2.73
979 1150 5.928839 CCATGTCTAGTTTGGAATAGATCGG 59.071 44.000 0.00 0.00 31.05 4.18
981 1152 7.158021 CCTCCATGTCTAGTTTGGAATAGATC 58.842 42.308 10.71 0.00 38.99 2.75
983 1154 5.163301 GCCTCCATGTCTAGTTTGGAATAGA 60.163 44.000 10.71 0.00 38.99 1.98
993 1173 1.330655 CCACCGCCTCCATGTCTAGT 61.331 60.000 0.00 0.00 0.00 2.57
1048 1228 2.362369 CGGTGCACTCCTCCTCCAT 61.362 63.158 17.98 0.00 0.00 3.41
1172 1352 3.083349 CCTCCTCCACGCCCATCA 61.083 66.667 0.00 0.00 0.00 3.07
1308 2042 1.371022 CGAGGACGATGAGATGGCG 60.371 63.158 0.00 0.00 42.66 5.69
1352 2089 2.807045 GTCCAGACGCTGACGCAG 60.807 66.667 8.20 2.92 45.53 5.18
1353 2090 4.357947 GGTCCAGACGCTGACGCA 62.358 66.667 8.20 0.00 45.53 5.24
1491 2248 0.457853 TACGTCCGAAGCATGCACTC 60.458 55.000 21.98 14.70 0.00 3.51
1521 2284 1.449246 GCTTGTGCTCTGAGGCGAT 60.449 57.895 6.83 0.00 36.03 4.58
1577 2583 1.202651 ACACTTGTGCTTAGCTTCCGT 60.203 47.619 5.60 0.00 0.00 4.69
1602 2608 7.987649 ACCAAAACTTACACGTAGAAATGAAA 58.012 30.769 0.00 0.00 0.00 2.69
1613 2619 2.608546 TCAACCGACCAAAACTTACACG 59.391 45.455 0.00 0.00 0.00 4.49
1630 2636 8.621286 ACCATAATTAAGTTTCATCGGATCAAC 58.379 33.333 0.00 0.00 0.00 3.18
1692 2842 6.825213 TCCTCAGGTGATGATTAATTGAACTG 59.175 38.462 0.00 0.00 37.28 3.16
1768 2919 4.516323 TGCACCGATGGATATATGATTGG 58.484 43.478 0.00 0.00 0.00 3.16
1773 2924 4.432712 TCGATTGCACCGATGGATATATG 58.567 43.478 6.31 0.00 0.00 1.78
1802 4522 4.088648 CGACGAGGAATAAACAATTGCAC 58.911 43.478 5.05 0.00 38.32 4.57
1805 4525 3.181524 ACGCGACGAGGAATAAACAATTG 60.182 43.478 15.93 3.24 0.00 2.32
1814 4534 0.037605 AGGAAAACGCGACGAGGAAT 60.038 50.000 15.93 0.00 0.00 3.01
1830 4550 5.131642 AGCAAGATCATTCTCACCAATAGGA 59.868 40.000 0.00 0.00 38.69 2.94
1833 4553 5.131642 AGGAGCAAGATCATTCTCACCAATA 59.868 40.000 0.25 0.00 0.00 1.90
1870 4595 4.147321 ACTGATGAGGTGCACAAAGAAAT 58.853 39.130 20.43 2.81 0.00 2.17
1904 4629 0.521735 GCCCGGAGCAGTTTTTACTG 59.478 55.000 0.73 1.03 42.97 2.74
1906 4631 1.500396 CGCCCGGAGCAGTTTTTAC 59.500 57.895 0.73 0.00 44.04 2.01
1907 4632 2.329614 GCGCCCGGAGCAGTTTTTA 61.330 57.895 15.48 0.00 44.04 1.52
1908 4633 2.741486 TAGCGCCCGGAGCAGTTTTT 62.741 55.000 20.97 4.86 44.04 1.94
1909 4634 2.741486 TTAGCGCCCGGAGCAGTTTT 62.741 55.000 20.97 5.48 44.04 2.43
1912 4637 4.452733 GTTAGCGCCCGGAGCAGT 62.453 66.667 20.97 6.73 44.04 4.40
1914 4639 2.813226 AAATGTTAGCGCCCGGAGCA 62.813 55.000 20.97 2.03 44.04 4.26
1916 4641 0.808755 AAAAATGTTAGCGCCCGGAG 59.191 50.000 0.73 0.00 0.00 4.63
1917 4642 2.110901 TAAAAATGTTAGCGCCCGGA 57.889 45.000 0.73 0.00 0.00 5.14
1918 4643 2.923605 TTAAAAATGTTAGCGCCCGG 57.076 45.000 2.29 0.00 0.00 5.73
1919 4644 5.771602 AAAATTAAAAATGTTAGCGCCCG 57.228 34.783 2.29 0.00 0.00 6.13
1920 4645 5.792962 GCAAAAATTAAAAATGTTAGCGCCC 59.207 36.000 2.29 0.00 0.00 6.13
1921 4646 5.792962 GGCAAAAATTAAAAATGTTAGCGCC 59.207 36.000 2.29 0.00 0.00 6.53
1922 4647 5.503033 CGGCAAAAATTAAAAATGTTAGCGC 59.497 36.000 0.00 0.00 0.00 5.92
1923 4648 5.503033 GCGGCAAAAATTAAAAATGTTAGCG 59.497 36.000 0.00 0.00 0.00 4.26
1924 4649 5.792962 GGCGGCAAAAATTAAAAATGTTAGC 59.207 36.000 3.07 0.00 0.00 3.09
1926 4651 5.107065 CCGGCGGCAAAAATTAAAAATGTTA 60.107 36.000 15.42 0.00 0.00 2.41
1927 4652 4.319839 CCGGCGGCAAAAATTAAAAATGTT 60.320 37.500 15.42 0.00 0.00 2.71
1928 4653 3.187432 CCGGCGGCAAAAATTAAAAATGT 59.813 39.130 15.42 0.00 0.00 2.71
1929 4654 3.433615 TCCGGCGGCAAAAATTAAAAATG 59.566 39.130 23.83 0.00 0.00 2.32
1930 4655 3.433957 GTCCGGCGGCAAAAATTAAAAAT 59.566 39.130 23.83 0.00 0.00 1.82
1931 4656 2.801111 GTCCGGCGGCAAAAATTAAAAA 59.199 40.909 23.83 0.00 0.00 1.94
1932 4657 2.223971 TGTCCGGCGGCAAAAATTAAAA 60.224 40.909 23.83 0.00 0.00 1.52
1934 4659 0.959553 TGTCCGGCGGCAAAAATTAA 59.040 45.000 23.83 0.00 0.00 1.40
1935 4660 0.959553 TTGTCCGGCGGCAAAAATTA 59.040 45.000 25.85 9.02 0.00 1.40
1936 4661 0.598942 GTTGTCCGGCGGCAAAAATT 60.599 50.000 28.32 0.00 0.00 1.82
1937 4662 1.006688 GTTGTCCGGCGGCAAAAAT 60.007 52.632 28.32 0.00 0.00 1.82
1939 4664 2.517402 AGTTGTCCGGCGGCAAAA 60.517 55.556 28.32 17.46 0.00 2.44
1949 4674 2.549332 GCTTCTGCTGGAGTTGTCC 58.451 57.895 0.34 0.00 44.24 4.02
1960 4685 3.674423 CGCACTATTTTACAGCTTCTGC 58.326 45.455 0.00 0.00 34.37 4.26
1961 4686 3.674423 GCGCACTATTTTACAGCTTCTG 58.326 45.455 0.30 0.00 37.52 3.02
1962 4687 2.348666 CGCGCACTATTTTACAGCTTCT 59.651 45.455 8.75 0.00 0.00 2.85
1963 4688 2.694043 CGCGCACTATTTTACAGCTTC 58.306 47.619 8.75 0.00 0.00 3.86
1964 4689 1.202031 GCGCGCACTATTTTACAGCTT 60.202 47.619 29.10 0.00 0.00 3.74
1965 4690 0.373716 GCGCGCACTATTTTACAGCT 59.626 50.000 29.10 0.00 0.00 4.24
1966 4691 0.919427 CGCGCGCACTATTTTACAGC 60.919 55.000 32.61 0.00 0.00 4.40
1967 4692 0.643310 TCGCGCGCACTATTTTACAG 59.357 50.000 32.61 10.01 0.00 2.74
1968 4693 1.069255 TTCGCGCGCACTATTTTACA 58.931 45.000 32.61 0.00 0.00 2.41
1969 4694 2.147921 TTTCGCGCGCACTATTTTAC 57.852 45.000 32.61 0.00 0.00 2.01
1970 4695 2.876992 TTTTCGCGCGCACTATTTTA 57.123 40.000 32.61 0.15 0.00 1.52
1971 4696 2.039327 TTTTTCGCGCGCACTATTTT 57.961 40.000 32.61 0.00 0.00 1.82
1988 4713 4.639171 CGCGCGCCCAACCTTTTT 62.639 61.111 27.72 0.00 0.00 1.94
1994 4719 3.882835 TTTTTAGCGCGCGCCCAAC 62.883 57.895 46.98 23.47 43.17 3.77
1995 4720 3.661131 TTTTTAGCGCGCGCCCAA 61.661 55.556 46.98 37.17 43.17 4.12
2009 4734 7.675962 ATTTGCAACATGTGATAGCATTTTT 57.324 28.000 13.85 1.30 34.87 1.94
2010 4735 7.675962 AATTTGCAACATGTGATAGCATTTT 57.324 28.000 13.85 9.27 34.87 1.82
2011 4736 7.388224 TCAAATTTGCAACATGTGATAGCATTT 59.612 29.630 13.54 10.53 34.87 2.32
2012 4737 6.874664 TCAAATTTGCAACATGTGATAGCATT 59.125 30.769 13.54 6.25 34.87 3.56
2013 4738 6.399743 TCAAATTTGCAACATGTGATAGCAT 58.600 32.000 13.54 1.34 34.87 3.79
2014 4739 5.780984 TCAAATTTGCAACATGTGATAGCA 58.219 33.333 13.54 5.23 0.00 3.49
2015 4740 5.290158 CCTCAAATTTGCAACATGTGATAGC 59.710 40.000 13.54 2.33 0.00 2.97
2016 4741 5.290158 GCCTCAAATTTGCAACATGTGATAG 59.710 40.000 13.54 1.20 0.00 2.08
2017 4742 5.170021 GCCTCAAATTTGCAACATGTGATA 58.830 37.500 13.54 0.00 0.00 2.15
2018 4743 3.998341 GCCTCAAATTTGCAACATGTGAT 59.002 39.130 13.54 0.00 0.00 3.06
2019 4744 3.391965 GCCTCAAATTTGCAACATGTGA 58.608 40.909 13.54 6.49 0.00 3.58
2020 4745 2.156117 CGCCTCAAATTTGCAACATGTG 59.844 45.455 13.54 2.13 0.00 3.21
2021 4746 2.406130 CGCCTCAAATTTGCAACATGT 58.594 42.857 13.54 0.00 0.00 3.21
2022 4747 1.127213 GCGCCTCAAATTTGCAACATG 59.873 47.619 13.54 0.00 0.00 3.21
2023 4748 1.431496 GCGCCTCAAATTTGCAACAT 58.569 45.000 13.54 0.00 0.00 2.71
2024 4749 0.599728 GGCGCCTCAAATTTGCAACA 60.600 50.000 22.15 0.00 0.00 3.33
2025 4750 1.616872 CGGCGCCTCAAATTTGCAAC 61.617 55.000 26.68 3.98 0.00 4.17
2026 4751 1.372748 CGGCGCCTCAAATTTGCAA 60.373 52.632 26.68 0.00 0.00 4.08
2027 4752 2.257980 CGGCGCCTCAAATTTGCA 59.742 55.556 26.68 2.12 0.00 4.08
2028 4753 2.283472 ATCCGGCGCCTCAAATTTGC 62.283 55.000 26.68 1.00 0.00 3.68
2029 4754 0.173255 AATCCGGCGCCTCAAATTTG 59.827 50.000 26.68 12.15 0.00 2.32
2030 4755 0.173255 CAATCCGGCGCCTCAAATTT 59.827 50.000 26.68 6.48 0.00 1.82
2031 4756 1.809207 CAATCCGGCGCCTCAAATT 59.191 52.632 26.68 14.93 0.00 1.82
2032 4757 2.774799 GCAATCCGGCGCCTCAAAT 61.775 57.895 26.68 9.38 0.00 2.32
2033 4758 3.439540 GCAATCCGGCGCCTCAAA 61.440 61.111 26.68 7.16 0.00 2.69
2049 4774 1.511043 TAAATTGTGAAGCGCGCGC 60.511 52.632 45.10 45.10 42.33 6.86
2050 4775 0.451957 TGTAAATTGTGAAGCGCGCG 60.452 50.000 28.44 28.44 0.00 6.86
2051 4776 0.974836 GTGTAAATTGTGAAGCGCGC 59.025 50.000 26.66 26.66 0.00 6.86
2052 4777 2.233355 CAGTGTAAATTGTGAAGCGCG 58.767 47.619 0.00 0.00 0.00 6.86
2053 4778 1.978782 GCAGTGTAAATTGTGAAGCGC 59.021 47.619 0.00 0.00 0.00 5.92
2054 4779 3.266541 TGCAGTGTAAATTGTGAAGCG 57.733 42.857 0.00 0.00 0.00 4.68
2055 4780 6.529463 AAAATGCAGTGTAAATTGTGAAGC 57.471 33.333 0.00 0.00 0.00 3.86
2079 4804 1.140407 CGAAAACACGCGCCCAAAAA 61.140 50.000 5.73 0.00 0.00 1.94
2080 4805 1.586564 CGAAAACACGCGCCCAAAA 60.587 52.632 5.73 0.00 0.00 2.44
2081 4806 2.024871 CGAAAACACGCGCCCAAA 59.975 55.556 5.73 0.00 0.00 3.28
2082 4807 3.955101 CCGAAAACACGCGCCCAA 61.955 61.111 5.73 0.00 0.00 4.12
2087 4812 2.262187 CTAGACGCCGAAAACACGCG 62.262 60.000 3.53 3.53 38.17 6.01
2088 4813 1.280206 ACTAGACGCCGAAAACACGC 61.280 55.000 0.00 0.00 0.00 5.34
2089 4814 1.967762 TACTAGACGCCGAAAACACG 58.032 50.000 0.00 0.00 0.00 4.49
2090 4815 3.422732 GCTTTACTAGACGCCGAAAACAC 60.423 47.826 0.00 0.00 0.00 3.32
2091 4816 2.733026 GCTTTACTAGACGCCGAAAACA 59.267 45.455 0.00 0.00 0.00 2.83
2092 4817 2.733026 TGCTTTACTAGACGCCGAAAAC 59.267 45.455 0.00 0.00 0.00 2.43
2093 4818 3.029320 TGCTTTACTAGACGCCGAAAA 57.971 42.857 0.00 0.00 0.00 2.29
2094 4819 2.728690 TGCTTTACTAGACGCCGAAA 57.271 45.000 0.00 0.00 0.00 3.46
2095 4820 2.728690 TTGCTTTACTAGACGCCGAA 57.271 45.000 0.00 0.00 0.00 4.30
2096 4821 2.094390 ACATTGCTTTACTAGACGCCGA 60.094 45.455 0.00 0.00 0.00 5.54
2097 4822 2.268298 ACATTGCTTTACTAGACGCCG 58.732 47.619 0.00 0.00 0.00 6.46
2098 4823 3.181510 CCAACATTGCTTTACTAGACGCC 60.182 47.826 0.00 0.00 0.00 5.68
2099 4824 3.181510 CCCAACATTGCTTTACTAGACGC 60.182 47.826 0.00 0.00 0.00 5.19
2100 4825 4.000988 ACCCAACATTGCTTTACTAGACG 58.999 43.478 0.00 0.00 0.00 4.18
2101 4826 4.395231 GGACCCAACATTGCTTTACTAGAC 59.605 45.833 0.00 0.00 0.00 2.59
2102 4827 4.585879 GGACCCAACATTGCTTTACTAGA 58.414 43.478 0.00 0.00 0.00 2.43
2103 4828 3.374058 CGGACCCAACATTGCTTTACTAG 59.626 47.826 0.00 0.00 0.00 2.57
2104 4829 3.340034 CGGACCCAACATTGCTTTACTA 58.660 45.455 0.00 0.00 0.00 1.82
2105 4830 2.159382 CGGACCCAACATTGCTTTACT 58.841 47.619 0.00 0.00 0.00 2.24
2106 4831 1.201414 CCGGACCCAACATTGCTTTAC 59.799 52.381 0.00 0.00 0.00 2.01
2107 4832 1.540267 CCGGACCCAACATTGCTTTA 58.460 50.000 0.00 0.00 0.00 1.85
2108 4833 1.815817 GCCGGACCCAACATTGCTTT 61.816 55.000 5.05 0.00 0.00 3.51
2109 4834 2.275380 GCCGGACCCAACATTGCTT 61.275 57.895 5.05 0.00 0.00 3.91
2110 4835 2.676471 GCCGGACCCAACATTGCT 60.676 61.111 5.05 0.00 0.00 3.91
2111 4836 4.114997 CGCCGGACCCAACATTGC 62.115 66.667 5.05 0.00 0.00 3.56
2112 4837 4.114997 GCGCCGGACCCAACATTG 62.115 66.667 5.05 0.00 0.00 2.82
2117 4842 3.821636 TTTAACGCGCCGGACCCAA 62.822 57.895 5.05 0.00 0.00 4.12
2118 4843 3.821636 TTTTAACGCGCCGGACCCA 62.822 57.895 5.05 0.00 0.00 4.51
2119 4844 1.925415 ATTTTTAACGCGCCGGACCC 61.925 55.000 5.05 0.00 0.00 4.46
2120 4845 0.795358 CATTTTTAACGCGCCGGACC 60.795 55.000 5.05 0.00 0.00 4.46
2121 4846 1.400246 GCATTTTTAACGCGCCGGAC 61.400 55.000 5.05 0.00 0.00 4.79
2122 4847 1.154188 GCATTTTTAACGCGCCGGA 60.154 52.632 5.05 0.00 0.00 5.14
2123 4848 0.097325 TAGCATTTTTAACGCGCCGG 59.903 50.000 5.73 0.00 0.00 6.13
2124 4849 1.176838 GTAGCATTTTTAACGCGCCG 58.823 50.000 5.73 0.00 0.00 6.46
2125 4850 2.173964 CTGTAGCATTTTTAACGCGCC 58.826 47.619 5.73 0.00 0.00 6.53
2126 4851 2.588106 CACTGTAGCATTTTTAACGCGC 59.412 45.455 5.73 0.00 0.00 6.86
2127 4852 3.160545 CCACTGTAGCATTTTTAACGCG 58.839 45.455 3.53 3.53 0.00 6.01
2128 4853 2.914838 GCCACTGTAGCATTTTTAACGC 59.085 45.455 0.00 0.00 0.00 4.84
2129 4854 3.160545 CGCCACTGTAGCATTTTTAACG 58.839 45.455 0.00 0.00 0.00 3.18
2130 4855 2.914838 GCGCCACTGTAGCATTTTTAAC 59.085 45.455 0.00 0.00 0.00 2.01
2131 4856 2.413502 CGCGCCACTGTAGCATTTTTAA 60.414 45.455 0.00 0.00 0.00 1.52
2132 4857 1.129624 CGCGCCACTGTAGCATTTTTA 59.870 47.619 0.00 0.00 0.00 1.52
2133 4858 0.109781 CGCGCCACTGTAGCATTTTT 60.110 50.000 0.00 0.00 0.00 1.94
2134 4859 1.501741 CGCGCCACTGTAGCATTTT 59.498 52.632 0.00 0.00 0.00 1.82
2135 4860 3.039202 GCGCGCCACTGTAGCATTT 62.039 57.895 23.24 0.00 0.00 2.32
2136 4861 2.572095 TAGCGCGCCACTGTAGCATT 62.572 55.000 30.33 6.92 0.00 3.56
2137 4862 2.572095 TTAGCGCGCCACTGTAGCAT 62.572 55.000 30.33 7.53 0.00 3.79
2138 4863 2.773397 TTTAGCGCGCCACTGTAGCA 62.773 55.000 30.33 0.71 0.00 3.49
2139 4864 1.632046 TTTTAGCGCGCCACTGTAGC 61.632 55.000 30.33 0.00 0.00 3.58
2140 4865 0.094730 GTTTTAGCGCGCCACTGTAG 59.905 55.000 30.33 0.00 0.00 2.74
2141 4866 0.320073 AGTTTTAGCGCGCCACTGTA 60.320 50.000 30.33 10.64 0.00 2.74
2142 4867 0.320073 TAGTTTTAGCGCGCCACTGT 60.320 50.000 30.33 11.88 0.00 3.55
2143 4868 1.006832 ATAGTTTTAGCGCGCCACTG 58.993 50.000 30.33 0.00 0.00 3.66
2144 4869 1.734163 AATAGTTTTAGCGCGCCACT 58.266 45.000 30.33 25.00 0.00 4.00
2145 4870 2.537639 AAATAGTTTTAGCGCGCCAC 57.462 45.000 30.33 19.26 0.00 5.01
2146 4871 4.267357 CTAAAATAGTTTTAGCGCGCCA 57.733 40.909 30.33 12.88 43.74 5.69
2155 4880 9.797556 AAAAGTTTCGTGCTCTAAAATAGTTTT 57.202 25.926 0.00 0.00 36.67 2.43
2156 4881 9.233232 CAAAAGTTTCGTGCTCTAAAATAGTTT 57.767 29.630 0.00 0.00 0.00 2.66
2157 4882 8.403236 ACAAAAGTTTCGTGCTCTAAAATAGTT 58.597 29.630 0.00 0.00 0.00 2.24
2158 4883 7.855904 CACAAAAGTTTCGTGCTCTAAAATAGT 59.144 33.333 0.00 0.00 0.00 2.12
2159 4884 8.204182 CACAAAAGTTTCGTGCTCTAAAATAG 57.796 34.615 0.00 0.00 0.00 1.73
2170 4895 0.248458 AGGCGCACAAAAGTTTCGTG 60.248 50.000 10.83 2.15 0.00 4.35
2171 4896 0.248458 CAGGCGCACAAAAGTTTCGT 60.248 50.000 10.83 0.00 0.00 3.85
2172 4897 0.248458 ACAGGCGCACAAAAGTTTCG 60.248 50.000 10.83 0.00 0.00 3.46
2173 4898 1.587946 CAACAGGCGCACAAAAGTTTC 59.412 47.619 10.83 0.00 0.00 2.78
2174 4899 1.639280 CAACAGGCGCACAAAAGTTT 58.361 45.000 10.83 0.00 0.00 2.66
2175 4900 0.179113 CCAACAGGCGCACAAAAGTT 60.179 50.000 10.83 0.91 0.00 2.66
2176 4901 1.034838 TCCAACAGGCGCACAAAAGT 61.035 50.000 10.83 0.00 0.00 2.66
2177 4902 0.318107 CTCCAACAGGCGCACAAAAG 60.318 55.000 10.83 0.00 0.00 2.27
2178 4903 0.749818 TCTCCAACAGGCGCACAAAA 60.750 50.000 10.83 0.00 0.00 2.44
2179 4904 0.537143 ATCTCCAACAGGCGCACAAA 60.537 50.000 10.83 0.00 0.00 2.83
2180 4905 1.073025 ATCTCCAACAGGCGCACAA 59.927 52.632 10.83 0.00 0.00 3.33
2181 4906 1.672030 CATCTCCAACAGGCGCACA 60.672 57.895 10.83 0.00 0.00 4.57
2182 4907 3.044059 GCATCTCCAACAGGCGCAC 62.044 63.158 10.83 0.00 0.00 5.34
2183 4908 2.747460 GCATCTCCAACAGGCGCA 60.747 61.111 10.83 0.00 0.00 6.09
2184 4909 2.437359 AGCATCTCCAACAGGCGC 60.437 61.111 0.00 0.00 0.00 6.53
2185 4910 1.078918 TGAGCATCTCCAACAGGCG 60.079 57.895 0.00 0.00 34.92 5.52
2186 4911 0.321919 TGTGAGCATCTCCAACAGGC 60.322 55.000 0.00 0.00 34.92 4.85
2187 4912 2.014857 CATGTGAGCATCTCCAACAGG 58.985 52.381 0.00 0.00 34.92 4.00
2188 4913 2.937149 CTCATGTGAGCATCTCCAACAG 59.063 50.000 0.00 0.00 35.13 3.16
2189 4914 2.568509 TCTCATGTGAGCATCTCCAACA 59.431 45.455 5.14 0.00 41.80 3.33
2190 4915 3.196463 CTCTCATGTGAGCATCTCCAAC 58.804 50.000 11.58 0.00 41.80 3.77
2191 4916 2.169978 CCTCTCATGTGAGCATCTCCAA 59.830 50.000 17.52 0.00 41.80 3.53
2192 4917 1.761198 CCTCTCATGTGAGCATCTCCA 59.239 52.381 17.52 0.00 41.80 3.86
2193 4918 1.070445 CCCTCTCATGTGAGCATCTCC 59.930 57.143 17.52 0.00 41.80 3.71
2194 4919 1.761784 ACCCTCTCATGTGAGCATCTC 59.238 52.381 17.52 0.00 41.80 2.75
2195 4920 1.485480 CACCCTCTCATGTGAGCATCT 59.515 52.381 17.52 0.00 41.80 2.90
2196 4921 1.483827 TCACCCTCTCATGTGAGCATC 59.516 52.381 17.52 0.00 41.80 3.91
2197 4922 1.576577 TCACCCTCTCATGTGAGCAT 58.423 50.000 17.52 6.29 41.80 3.79
2198 4923 1.208776 CATCACCCTCTCATGTGAGCA 59.791 52.381 17.52 3.55 44.07 4.26
2199 4924 1.950828 CATCACCCTCTCATGTGAGC 58.049 55.000 17.52 0.00 44.07 4.26
2200 4925 1.485480 AGCATCACCCTCTCATGTGAG 59.515 52.381 16.27 16.27 44.07 3.51
2201 4926 1.208776 CAGCATCACCCTCTCATGTGA 59.791 52.381 0.00 0.00 44.86 3.58
2202 4927 1.664873 CAGCATCACCCTCTCATGTG 58.335 55.000 0.00 0.00 0.00 3.21
2218 4943 0.249238 CTCCACTATCGAGCACCAGC 60.249 60.000 0.00 0.00 42.56 4.85
2219 4944 1.393603 TCTCCACTATCGAGCACCAG 58.606 55.000 0.00 0.00 0.00 4.00
2223 4950 4.832248 ACAAAATTCTCCACTATCGAGCA 58.168 39.130 0.00 0.00 0.00 4.26
2268 4995 3.146066 CTCACATTTTCCACGGGAGAAA 58.854 45.455 0.00 0.00 29.69 2.52
2271 4998 2.076863 GACTCACATTTTCCACGGGAG 58.923 52.381 0.00 0.00 31.21 4.30
2274 5001 1.535462 GGTGACTCACATTTTCCACGG 59.465 52.381 11.34 0.00 35.86 4.94
2275 5002 1.535462 GGGTGACTCACATTTTCCACG 59.465 52.381 11.34 0.00 35.86 4.94
2276 5003 2.582052 TGGGTGACTCACATTTTCCAC 58.418 47.619 11.34 0.00 35.86 4.02
2277 5004 3.117701 TCTTGGGTGACTCACATTTTCCA 60.118 43.478 11.34 5.85 35.86 3.53
2278 5005 3.486383 TCTTGGGTGACTCACATTTTCC 58.514 45.455 11.34 3.36 35.86 3.13
2282 5014 4.279169 CACAATTCTTGGGTGACTCACATT 59.721 41.667 11.34 0.00 35.86 2.71
2283 5015 3.822735 CACAATTCTTGGGTGACTCACAT 59.177 43.478 11.34 0.00 35.86 3.21
2300 5033 4.640201 AGACAAACTTGCAGTGTACACAAT 59.360 37.500 27.06 5.30 0.00 2.71
2307 5040 4.752101 GTCTATCAGACAAACTTGCAGTGT 59.248 41.667 1.46 0.00 44.45 3.55
2336 5069 6.701400 GCATGCCATAACTTTTGTATTTAGGG 59.299 38.462 6.36 0.00 31.25 3.53
2339 5072 8.694540 AGATGCATGCCATAACTTTTGTATTTA 58.305 29.630 16.68 0.00 33.29 1.40
2351 5084 4.712051 AGACCTAAGATGCATGCCATAA 57.288 40.909 16.68 0.00 33.29 1.90
2353 5086 3.589951 AAGACCTAAGATGCATGCCAT 57.410 42.857 16.68 8.81 36.70 4.40
2358 5091 5.363939 GTCAAGCTAAGACCTAAGATGCAT 58.636 41.667 0.00 0.00 0.00 3.96
2369 5102 2.814336 CCAACAAGGGTCAAGCTAAGAC 59.186 50.000 10.02 10.02 35.29 3.01
2370 5103 2.814097 GCCAACAAGGGTCAAGCTAAGA 60.814 50.000 0.00 0.00 38.09 2.10
2371 5104 1.541588 GCCAACAAGGGTCAAGCTAAG 59.458 52.381 0.00 0.00 38.09 2.18
2372 5105 1.616159 GCCAACAAGGGTCAAGCTAA 58.384 50.000 0.00 0.00 38.09 3.09
2373 5106 3.339547 GCCAACAAGGGTCAAGCTA 57.660 52.632 0.00 0.00 38.09 3.32
2374 5107 4.181051 GCCAACAAGGGTCAAGCT 57.819 55.556 0.00 0.00 38.09 3.74
2381 5114 1.094785 CCATTCGTAGCCAACAAGGG 58.905 55.000 0.00 0.00 38.09 3.95
2382 5115 1.737793 GTCCATTCGTAGCCAACAAGG 59.262 52.381 0.00 0.00 41.84 3.61
2383 5116 1.393539 CGTCCATTCGTAGCCAACAAG 59.606 52.381 0.00 0.00 0.00 3.16
2384 5117 1.434555 CGTCCATTCGTAGCCAACAA 58.565 50.000 0.00 0.00 0.00 2.83
2385 5118 1.017177 GCGTCCATTCGTAGCCAACA 61.017 55.000 0.00 0.00 0.00 3.33
2386 5119 1.713830 GCGTCCATTCGTAGCCAAC 59.286 57.895 0.00 0.00 0.00 3.77
2387 5120 1.807981 CGCGTCCATTCGTAGCCAA 60.808 57.895 0.00 0.00 0.00 4.52
2388 5121 2.202690 CGCGTCCATTCGTAGCCA 60.203 61.111 0.00 0.00 0.00 4.75
2389 5122 3.627218 GCGCGTCCATTCGTAGCC 61.627 66.667 8.43 0.00 33.45 3.93
2390 5123 0.868602 TAAGCGCGTCCATTCGTAGC 60.869 55.000 8.43 0.00 37.07 3.58
2391 5124 1.121240 CTAAGCGCGTCCATTCGTAG 58.879 55.000 8.43 0.00 0.00 3.51
2392 5125 0.248743 CCTAAGCGCGTCCATTCGTA 60.249 55.000 8.43 0.00 0.00 3.43
2393 5126 1.518572 CCTAAGCGCGTCCATTCGT 60.519 57.895 8.43 0.00 0.00 3.85
2394 5127 0.804544 TTCCTAAGCGCGTCCATTCG 60.805 55.000 8.43 0.00 0.00 3.34
2395 5128 3.059603 TTCCTAAGCGCGTCCATTC 57.940 52.632 8.43 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.