Multiple sequence alignment - TraesCS5D01G391000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G391000 chr5D 100.000 3706 0 0 1 3706 459313506 459317211 0.000000e+00 6844.0
1 TraesCS5D01G391000 chr5D 97.872 752 12 2 1 749 524914055 524914805 0.000000e+00 1297.0
2 TraesCS5D01G391000 chr5A 88.280 1698 107 48 1546 3206 578836857 578838499 0.000000e+00 1949.0
3 TraesCS5D01G391000 chr5A 91.198 818 25 17 750 1525 578835915 578836727 0.000000e+00 1068.0
4 TraesCS5D01G391000 chr5A 81.437 167 25 4 3522 3684 651797895 651798059 8.350000e-27 132.0
5 TraesCS5D01G391000 chr5A 100.000 28 0 0 3412 3439 452111561 452111588 7.000000e-03 52.8
6 TraesCS5D01G391000 chr5B 95.634 1168 37 6 1568 2724 563464153 563465317 0.000000e+00 1862.0
7 TraesCS5D01G391000 chr5B 94.679 1184 54 6 1546 2724 563544313 563543134 0.000000e+00 1829.0
8 TraesCS5D01G391000 chr5B 91.468 797 30 20 750 1527 563463268 563464045 0.000000e+00 1061.0
9 TraesCS5D01G391000 chr5B 88.235 816 39 27 750 1527 563545236 563544440 0.000000e+00 922.0
10 TraesCS5D01G391000 chr5B 81.046 153 25 4 3518 3666 114486223 114486375 6.500000e-23 119.0
11 TraesCS5D01G391000 chr5B 80.460 174 12 9 2866 3035 563465399 563465554 3.030000e-21 113.0
12 TraesCS5D01G391000 chr3D 91.452 1088 93 0 1636 2723 37969939 37968852 0.000000e+00 1495.0
13 TraesCS5D01G391000 chr3D 96.386 747 24 2 1 747 473449456 473448713 0.000000e+00 1227.0
14 TraesCS5D01G391000 chr3D 90.675 504 44 3 982 1483 37970920 37970418 0.000000e+00 667.0
15 TraesCS5D01G391000 chr3D 80.921 152 26 3 3518 3666 126939609 126939760 2.340000e-22 117.0
16 TraesCS5D01G391000 chr3B 91.368 1089 94 0 1636 2724 60366537 60365449 0.000000e+00 1491.0
17 TraesCS5D01G391000 chr3B 89.980 489 49 0 974 1462 60368089 60367601 1.880000e-177 632.0
18 TraesCS5D01G391000 chr3B 100.000 28 0 0 3412 3439 22654685 22654658 7.000000e-03 52.8
19 TraesCS5D01G391000 chr2D 97.470 751 16 2 1 751 20612865 20613612 0.000000e+00 1279.0
20 TraesCS5D01G391000 chr2D 81.098 164 29 2 3522 3683 49995860 49996023 3.000000e-26 130.0
21 TraesCS5D01G391000 chr6D 97.330 749 15 3 1 749 149308250 149308993 0.000000e+00 1267.0
22 TraesCS5D01G391000 chr7D 96.933 750 15 5 1 749 66506135 66505393 0.000000e+00 1251.0
23 TraesCS5D01G391000 chr1A 96.267 750 23 4 1 750 426525106 426525850 0.000000e+00 1225.0
24 TraesCS5D01G391000 chr1A 81.757 148 23 4 3522 3666 536636672 536636818 1.810000e-23 121.0
25 TraesCS5D01G391000 chr4B 95.187 748 34 2 1 748 534978319 534977574 0.000000e+00 1181.0
26 TraesCS5D01G391000 chr7A 86.629 1062 139 2 1639 2697 4515760 4516821 0.000000e+00 1171.0
27 TraesCS5D01G391000 chr7A 86.081 1092 146 5 1639 2725 4556977 4555887 0.000000e+00 1170.0
28 TraesCS5D01G391000 chr7A 88.337 463 54 0 1000 1462 4559792 4559330 1.160000e-154 556.0
29 TraesCS5D01G391000 chr7A 88.571 420 45 1 1046 1462 4511363 4511782 1.190000e-139 507.0
30 TraesCS5D01G391000 chr7A 100.000 28 0 0 3412 3439 430771678 430771651 7.000000e-03 52.8
31 TraesCS5D01G391000 chr6B 94.251 748 36 5 1 748 694110527 694111267 0.000000e+00 1136.0
32 TraesCS5D01G391000 chr6B 83.673 147 20 4 3522 3665 520547380 520547235 6.460000e-28 135.0
33 TraesCS5D01G391000 chr2B 92.102 747 53 5 1 746 792875067 792875808 0.000000e+00 1048.0
34 TraesCS5D01G391000 chr2B 84.977 213 32 0 2481 2693 439916536 439916324 2.240000e-52 217.0
35 TraesCS5D01G391000 chr3A 91.008 645 51 5 2133 2770 48663772 48663128 0.000000e+00 863.0
36 TraesCS5D01G391000 chr3A 90.397 479 46 0 1636 2114 48664334 48663856 6.750000e-177 630.0
37 TraesCS5D01G391000 chr4A 84.433 758 110 7 1639 2390 738980734 738979979 0.000000e+00 739.0
38 TraesCS5D01G391000 chr4A 87.553 474 59 0 989 1462 738983804 738983331 1.950000e-152 549.0
39 TraesCS5D01G391000 chr4A 78.743 334 71 0 1099 1432 585540067 585540400 1.340000e-54 224.0
40 TraesCS5D01G391000 chr4A 97.143 35 0 1 3405 3438 724867956 724867990 1.440000e-04 58.4
41 TraesCS5D01G391000 chr1B 83.108 148 21 4 3522 3666 15747039 15747185 8.350000e-27 132.0
42 TraesCS5D01G391000 chr1B 82.119 151 23 4 3522 3669 355814516 355814367 3.890000e-25 126.0
43 TraesCS5D01G391000 chr1B 92.105 38 3 0 3401 3438 437517578 437517615 2.000000e-03 54.7
44 TraesCS5D01G391000 chr1D 79.641 167 28 4 3522 3684 14192926 14192762 8.410000e-22 115.0
45 TraesCS5D01G391000 chr7B 100.000 28 0 0 3412 3439 278928877 278928850 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G391000 chr5D 459313506 459317211 3705 False 6844.0 6844 100.000000 1 3706 1 chr5D.!!$F1 3705
1 TraesCS5D01G391000 chr5D 524914055 524914805 750 False 1297.0 1297 97.872000 1 749 1 chr5D.!!$F2 748
2 TraesCS5D01G391000 chr5A 578835915 578838499 2584 False 1508.5 1949 89.739000 750 3206 2 chr5A.!!$F3 2456
3 TraesCS5D01G391000 chr5B 563543134 563545236 2102 True 1375.5 1829 91.457000 750 2724 2 chr5B.!!$R1 1974
4 TraesCS5D01G391000 chr5B 563463268 563465554 2286 False 1012.0 1862 89.187333 750 3035 3 chr5B.!!$F2 2285
5 TraesCS5D01G391000 chr3D 473448713 473449456 743 True 1227.0 1227 96.386000 1 747 1 chr3D.!!$R1 746
6 TraesCS5D01G391000 chr3D 37968852 37970920 2068 True 1081.0 1495 91.063500 982 2723 2 chr3D.!!$R2 1741
7 TraesCS5D01G391000 chr3B 60365449 60368089 2640 True 1061.5 1491 90.674000 974 2724 2 chr3B.!!$R2 1750
8 TraesCS5D01G391000 chr2D 20612865 20613612 747 False 1279.0 1279 97.470000 1 751 1 chr2D.!!$F1 750
9 TraesCS5D01G391000 chr6D 149308250 149308993 743 False 1267.0 1267 97.330000 1 749 1 chr6D.!!$F1 748
10 TraesCS5D01G391000 chr7D 66505393 66506135 742 True 1251.0 1251 96.933000 1 749 1 chr7D.!!$R1 748
11 TraesCS5D01G391000 chr1A 426525106 426525850 744 False 1225.0 1225 96.267000 1 750 1 chr1A.!!$F1 749
12 TraesCS5D01G391000 chr4B 534977574 534978319 745 True 1181.0 1181 95.187000 1 748 1 chr4B.!!$R1 747
13 TraesCS5D01G391000 chr7A 4555887 4559792 3905 True 863.0 1170 87.209000 1000 2725 2 chr7A.!!$R2 1725
14 TraesCS5D01G391000 chr7A 4511363 4516821 5458 False 839.0 1171 87.600000 1046 2697 2 chr7A.!!$F1 1651
15 TraesCS5D01G391000 chr6B 694110527 694111267 740 False 1136.0 1136 94.251000 1 748 1 chr6B.!!$F1 747
16 TraesCS5D01G391000 chr2B 792875067 792875808 741 False 1048.0 1048 92.102000 1 746 1 chr2B.!!$F1 745
17 TraesCS5D01G391000 chr3A 48663128 48664334 1206 True 746.5 863 90.702500 1636 2770 2 chr3A.!!$R1 1134
18 TraesCS5D01G391000 chr4A 738979979 738983804 3825 True 644.0 739 85.993000 989 2390 2 chr4A.!!$R1 1401

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 787 0.181824 TCTAAACTAATGGCCCCCGC 59.818 55.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2735 9823 1.441732 CGAAGCCAGCATGCATAGCA 61.442 55.0 21.98 0.0 44.86 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 89 4.305956 CTTTGGGCTGGGGCAGGT 62.306 66.667 0.00 0.00 40.87 4.00
513 516 4.137872 TGGTCCGTTCGGCGATCC 62.138 66.667 11.76 9.30 44.77 3.36
531 534 1.373435 CCCTGTGACGCCAACCTTA 59.627 57.895 0.00 0.00 0.00 2.69
690 699 5.182001 CGGATCCTTCTCATGTTGTTTCTTT 59.818 40.000 10.75 0.00 0.00 2.52
776 785 1.814248 CGCTCTAAACTAATGGCCCCC 60.814 57.143 0.00 0.00 0.00 5.40
777 786 1.814248 GCTCTAAACTAATGGCCCCCG 60.814 57.143 0.00 0.00 0.00 5.73
778 787 0.181824 TCTAAACTAATGGCCCCCGC 59.818 55.000 0.00 0.00 0.00 6.13
779 788 0.182775 CTAAACTAATGGCCCCCGCT 59.817 55.000 0.00 0.00 34.44 5.52
818 827 3.542676 TGACGTGGGCCAACTCGT 61.543 61.111 19.07 19.07 39.21 4.18
844 853 2.746375 ATCGCCCACTTGCCCCTAG 61.746 63.158 0.00 0.00 0.00 3.02
845 854 4.489771 CGCCCACTTGCCCCTAGG 62.490 72.222 0.06 0.06 0.00 3.02
938 974 2.093447 AGCACTACCTCTACCATTGCAC 60.093 50.000 0.00 0.00 0.00 4.57
940 976 2.236146 CACTACCTCTACCATTGCACCA 59.764 50.000 0.00 0.00 0.00 4.17
1465 3716 2.941480 TCAGGGAGGACGAGGTAATAC 58.059 52.381 0.00 0.00 0.00 1.89
1578 8006 4.776435 TGAAGATGGCACTTATGGATGA 57.224 40.909 0.00 0.00 0.00 2.92
1579 8007 5.314718 TGAAGATGGCACTTATGGATGAT 57.685 39.130 0.00 0.00 0.00 2.45
1580 8008 5.067954 TGAAGATGGCACTTATGGATGATG 58.932 41.667 0.00 0.00 0.00 3.07
1588 8590 4.036027 GCACTTATGGATGATGAACAGTGG 59.964 45.833 0.00 0.00 0.00 4.00
1613 8616 2.377310 CGTCGGCCGATTCGTGTTT 61.377 57.895 33.58 0.00 39.56 2.83
1907 8921 1.224592 CCAGGGCATCTACACCACC 59.775 63.158 0.00 0.00 0.00 4.61
2337 9425 2.887568 GCATCGACCACTGCGAGG 60.888 66.667 0.00 0.00 41.49 4.63
2678 9766 2.898738 CTGATGCTCCTCGCCACT 59.101 61.111 0.00 0.00 38.05 4.00
2726 9814 2.647381 GCGTTTGGTTGCGTGCATG 61.647 57.895 0.09 0.09 0.00 4.06
2728 9816 1.591059 GTTTGGTTGCGTGCATGCA 60.591 52.632 29.30 29.30 44.61 3.96
2781 9877 2.107726 ACCTATCATGATGCATGCACCT 59.892 45.455 25.37 8.32 41.18 4.00
2782 9878 2.488153 CCTATCATGATGCATGCACCTG 59.512 50.000 25.37 19.63 41.18 4.00
2783 9879 2.067365 ATCATGATGCATGCACCTGT 57.933 45.000 25.37 6.94 41.18 4.00
2784 9880 1.385528 TCATGATGCATGCACCTGTC 58.614 50.000 25.37 17.24 41.18 3.51
2785 9881 1.064979 TCATGATGCATGCACCTGTCT 60.065 47.619 25.37 5.55 41.18 3.41
2786 9882 2.171027 TCATGATGCATGCACCTGTCTA 59.829 45.455 25.37 7.94 41.18 2.59
2787 9883 3.146847 CATGATGCATGCACCTGTCTAT 58.853 45.455 25.37 3.73 35.02 1.98
2788 9884 2.842457 TGATGCATGCACCTGTCTATC 58.158 47.619 25.37 14.50 0.00 2.08
2789 9885 1.797046 GATGCATGCACCTGTCTATCG 59.203 52.381 25.37 0.00 0.00 2.92
2806 9902 2.107546 GGTGTGTGTCCGTCGGTT 59.892 61.111 11.88 0.00 0.00 4.44
2818 9914 1.153628 GTCGGTTCGTCCCCATCTG 60.154 63.158 0.00 0.00 0.00 2.90
2829 9929 3.305720 GTCCCCATCTGTATCTACCACA 58.694 50.000 0.00 0.00 0.00 4.17
2868 9994 0.109597 CTAGGGTTTCGTACGTGCGT 60.110 55.000 24.94 7.84 0.00 5.24
2881 10010 1.154672 GTGCGTGCGTGTGTGTATG 60.155 57.895 0.00 0.00 0.00 2.39
2889 10018 2.736192 TGCGTGTGTGTATGATTGAGTG 59.264 45.455 0.00 0.00 0.00 3.51
2890 10019 2.736721 GCGTGTGTGTATGATTGAGTGT 59.263 45.455 0.00 0.00 0.00 3.55
2900 10029 5.994668 TGTATGATTGAGTGTGTTGCTTGTA 59.005 36.000 0.00 0.00 0.00 2.41
2901 10030 6.654582 TGTATGATTGAGTGTGTTGCTTGTAT 59.345 34.615 0.00 0.00 0.00 2.29
2920 10049 4.757657 TGTATTTGATGTGTGTGGTGTACC 59.242 41.667 0.00 0.00 0.00 3.34
2921 10050 1.872388 TTGATGTGTGTGGTGTACCG 58.128 50.000 0.00 0.00 39.43 4.02
2922 10051 0.753867 TGATGTGTGTGGTGTACCGT 59.246 50.000 0.00 0.00 39.43 4.83
2923 10052 1.144969 GATGTGTGTGGTGTACCGTG 58.855 55.000 0.00 0.00 39.43 4.94
2924 10053 0.466543 ATGTGTGTGGTGTACCGTGT 59.533 50.000 0.00 0.00 39.43 4.49
2925 10054 1.109609 TGTGTGTGGTGTACCGTGTA 58.890 50.000 0.00 0.00 39.43 2.90
2927 10056 0.030504 TGTGTGGTGTACCGTGTACG 59.969 55.000 8.89 0.00 39.43 3.67
2928 10057 0.030638 GTGTGGTGTACCGTGTACGT 59.969 55.000 3.57 0.00 39.43 3.57
2929 10058 0.030504 TGTGGTGTACCGTGTACGTG 59.969 55.000 0.00 0.00 39.43 4.49
2949 10078 1.518325 CGTGCAGTGTAACCATGGAA 58.482 50.000 21.47 2.58 37.80 3.53
2951 10080 2.504367 GTGCAGTGTAACCATGGAAGT 58.496 47.619 21.47 5.62 37.80 3.01
2954 10083 2.346803 CAGTGTAACCATGGAAGTCCG 58.653 52.381 21.47 0.00 37.80 4.79
2967 10096 5.031066 TGGAAGTCCGTAATAATTGAGGG 57.969 43.478 0.00 0.00 39.43 4.30
2969 10098 3.487120 AGTCCGTAATAATTGAGGGCC 57.513 47.619 0.00 0.00 0.00 5.80
2977 10106 2.859165 TAATTGAGGGCCATCGATCC 57.141 50.000 20.26 0.00 0.00 3.36
2979 10108 1.410850 ATTGAGGGCCATCGATCCGT 61.411 55.000 14.59 0.00 0.00 4.69
2980 10109 2.029666 GAGGGCCATCGATCCGTG 59.970 66.667 6.18 0.00 0.00 4.94
2981 10110 2.443952 AGGGCCATCGATCCGTGA 60.444 61.111 6.18 0.00 0.00 4.35
2982 10111 1.821061 GAGGGCCATCGATCCGTGAT 61.821 60.000 6.18 0.00 0.00 3.06
2983 10112 1.374758 GGGCCATCGATCCGTGATC 60.375 63.158 4.39 4.37 35.88 2.92
2991 10120 3.114558 GATCCGTGATCGATCTGCC 57.885 57.895 25.02 12.44 39.71 4.85
2992 10121 0.389166 GATCCGTGATCGATCTGCCC 60.389 60.000 25.02 10.18 39.71 5.36
2993 10122 2.147315 ATCCGTGATCGATCTGCCCG 62.147 60.000 25.02 19.44 39.71 6.13
2994 10123 2.413351 CGTGATCGATCTGCCCGT 59.587 61.111 25.02 0.00 39.71 5.28
2995 10124 1.946156 CGTGATCGATCTGCCCGTG 60.946 63.158 25.02 4.67 39.71 4.94
2996 10125 1.437573 GTGATCGATCTGCCCGTGA 59.562 57.895 25.02 0.22 0.00 4.35
3025 10154 5.509716 TCTGCATGAATGATTGGATTGTC 57.490 39.130 0.00 0.00 0.00 3.18
3026 10155 4.951094 TCTGCATGAATGATTGGATTGTCA 59.049 37.500 0.00 0.00 0.00 3.58
3036 10165 5.439721 TGATTGGATTGTCATTACTCCCAG 58.560 41.667 0.00 0.00 0.00 4.45
3037 10166 5.191522 TGATTGGATTGTCATTACTCCCAGA 59.808 40.000 0.00 0.00 0.00 3.86
3039 10168 6.823286 TTGGATTGTCATTACTCCCAGATA 57.177 37.500 0.00 0.00 0.00 1.98
3050 10179 1.883275 CTCCCAGATAGGAGCACGTAG 59.117 57.143 0.00 0.00 46.76 3.51
3051 10180 0.315568 CCCAGATAGGAGCACGTAGC 59.684 60.000 0.00 0.00 41.22 3.58
3068 10197 4.948621 ACGTAGCTAGTACTCCTGTTTGAT 59.051 41.667 0.00 0.00 0.00 2.57
3069 10198 5.163642 ACGTAGCTAGTACTCCTGTTTGATG 60.164 44.000 0.00 0.00 0.00 3.07
3070 10199 4.130286 AGCTAGTACTCCTGTTTGATGC 57.870 45.455 0.00 0.00 0.00 3.91
3072 10201 4.116238 GCTAGTACTCCTGTTTGATGCTC 58.884 47.826 0.00 0.00 0.00 4.26
3073 10202 4.382040 GCTAGTACTCCTGTTTGATGCTCA 60.382 45.833 0.00 0.00 0.00 4.26
3074 10203 4.199432 AGTACTCCTGTTTGATGCTCAG 57.801 45.455 0.00 0.00 0.00 3.35
3075 10204 3.580458 AGTACTCCTGTTTGATGCTCAGT 59.420 43.478 0.00 0.00 0.00 3.41
3076 10205 3.498774 ACTCCTGTTTGATGCTCAGTT 57.501 42.857 0.00 0.00 0.00 3.16
3077 10206 3.825328 ACTCCTGTTTGATGCTCAGTTT 58.175 40.909 0.00 0.00 0.00 2.66
3078 10207 3.567164 ACTCCTGTTTGATGCTCAGTTTG 59.433 43.478 0.00 0.00 0.00 2.93
3079 10208 3.817084 CTCCTGTTTGATGCTCAGTTTGA 59.183 43.478 0.00 0.00 0.00 2.69
3080 10209 3.817084 TCCTGTTTGATGCTCAGTTTGAG 59.183 43.478 1.75 1.75 46.90 3.02
3095 10224 4.151335 CAGTTTGAGACTTCATCCTGTTCG 59.849 45.833 0.00 0.00 36.10 3.95
3134 10263 2.543578 ACATCGCATGTGTCACCAC 58.456 52.632 6.09 0.00 43.01 4.16
3151 10280 1.681780 CCACATTATTGACCTGGCCGT 60.682 52.381 0.00 0.00 0.00 5.68
3156 10285 2.911928 TTGACCTGGCCGTCAACA 59.088 55.556 18.86 2.25 45.49 3.33
3166 10295 3.413327 TGGCCGTCAACAAGCTAATTAA 58.587 40.909 0.00 0.00 0.00 1.40
3170 10299 4.265320 GCCGTCAACAAGCTAATTAATTGC 59.735 41.667 11.05 11.67 0.00 3.56
3175 10304 6.818142 GTCAACAAGCTAATTAATTGCCCAAT 59.182 34.615 11.05 0.00 0.00 3.16
3177 10306 5.673514 ACAAGCTAATTAATTGCCCAATGG 58.326 37.500 11.05 0.00 0.00 3.16
3233 10362 8.654230 ACTCCATGATATTGCGATATGATTAC 57.346 34.615 11.36 0.00 0.00 1.89
3234 10363 8.260114 ACTCCATGATATTGCGATATGATTACA 58.740 33.333 11.36 3.26 0.00 2.41
3235 10364 9.269453 CTCCATGATATTGCGATATGATTACAT 57.731 33.333 11.36 5.40 40.16 2.29
3242 10371 9.981114 ATATTGCGATATGATTACATATTCGGA 57.019 29.630 5.60 0.00 45.97 4.55
3243 10372 7.520119 TTGCGATATGATTACATATTCGGAC 57.480 36.000 3.25 0.00 45.97 4.79
3244 10373 6.863275 TGCGATATGATTACATATTCGGACT 58.137 36.000 3.25 0.00 45.97 3.85
3245 10374 6.751888 TGCGATATGATTACATATTCGGACTG 59.248 38.462 3.25 0.00 45.97 3.51
3246 10375 6.972901 GCGATATGATTACATATTCGGACTGA 59.027 38.462 3.25 0.00 45.97 3.41
3247 10376 7.488150 GCGATATGATTACATATTCGGACTGAA 59.512 37.037 0.00 0.00 45.97 3.02
3248 10377 9.353999 CGATATGATTACATATTCGGACTGAAA 57.646 33.333 0.00 0.00 45.97 2.69
3256 10385 9.878667 TTACATATTCGGACTGAAATAAGTGAA 57.121 29.630 0.00 0.00 40.71 3.18
3257 10386 8.197988 ACATATTCGGACTGAAATAAGTGAAC 57.802 34.615 0.00 0.00 40.71 3.18
3258 10387 7.822334 ACATATTCGGACTGAAATAAGTGAACA 59.178 33.333 0.00 0.00 40.71 3.18
3259 10388 8.664798 CATATTCGGACTGAAATAAGTGAACAA 58.335 33.333 0.00 0.00 40.71 2.83
3260 10389 6.928979 TTCGGACTGAAATAAGTGAACAAA 57.071 33.333 0.00 0.00 32.37 2.83
3261 10390 7.504924 TTCGGACTGAAATAAGTGAACAAAT 57.495 32.000 0.00 0.00 32.37 2.32
3262 10391 8.610248 TTCGGACTGAAATAAGTGAACAAATA 57.390 30.769 0.00 0.00 32.37 1.40
3263 10392 8.025243 TCGGACTGAAATAAGTGAACAAATAC 57.975 34.615 0.00 0.00 0.00 1.89
3264 10393 7.658167 TCGGACTGAAATAAGTGAACAAATACA 59.342 33.333 0.00 0.00 0.00 2.29
3265 10394 8.286800 CGGACTGAAATAAGTGAACAAATACAA 58.713 33.333 0.00 0.00 0.00 2.41
3275 10404 7.276953 AGTGAACAAATACAATAAAATGCGC 57.723 32.000 0.00 0.00 0.00 6.09
3276 10405 6.310224 AGTGAACAAATACAATAAAATGCGCC 59.690 34.615 4.18 0.00 0.00 6.53
3277 10406 6.310224 GTGAACAAATACAATAAAATGCGCCT 59.690 34.615 4.18 0.00 0.00 5.52
3278 10407 7.486551 GTGAACAAATACAATAAAATGCGCCTA 59.513 33.333 4.18 0.00 0.00 3.93
3279 10408 8.194104 TGAACAAATACAATAAAATGCGCCTAT 58.806 29.630 4.18 0.00 0.00 2.57
3280 10409 9.672086 GAACAAATACAATAAAATGCGCCTATA 57.328 29.630 4.18 0.00 0.00 1.31
3281 10410 9.458374 AACAAATACAATAAAATGCGCCTATAC 57.542 29.630 4.18 0.00 0.00 1.47
3282 10411 8.625651 ACAAATACAATAAAATGCGCCTATACA 58.374 29.630 4.18 0.00 0.00 2.29
3283 10412 8.901748 CAAATACAATAAAATGCGCCTATACAC 58.098 33.333 4.18 0.00 0.00 2.90
3284 10413 7.737972 ATACAATAAAATGCGCCTATACACA 57.262 32.000 4.18 0.00 0.00 3.72
3285 10414 6.633500 ACAATAAAATGCGCCTATACACAT 57.367 33.333 4.18 0.00 0.00 3.21
3286 10415 7.737972 ACAATAAAATGCGCCTATACACATA 57.262 32.000 4.18 0.00 0.00 2.29
3287 10416 8.335532 ACAATAAAATGCGCCTATACACATAT 57.664 30.769 4.18 0.00 0.00 1.78
3288 10417 8.236586 ACAATAAAATGCGCCTATACACATATG 58.763 33.333 4.18 0.00 0.00 1.78
3289 10418 5.627499 AAAATGCGCCTATACACATATGG 57.373 39.130 4.18 0.00 0.00 2.74
3290 10419 3.981071 ATGCGCCTATACACATATGGT 57.019 42.857 4.18 4.97 0.00 3.55
3291 10420 3.762407 TGCGCCTATACACATATGGTT 57.238 42.857 4.18 0.00 0.00 3.67
3292 10421 4.079980 TGCGCCTATACACATATGGTTT 57.920 40.909 4.18 0.77 0.00 3.27
3293 10422 5.216614 TGCGCCTATACACATATGGTTTA 57.783 39.130 4.18 1.85 0.00 2.01
3294 10423 5.612351 TGCGCCTATACACATATGGTTTAA 58.388 37.500 4.18 0.00 0.00 1.52
3295 10424 6.056236 TGCGCCTATACACATATGGTTTAAA 58.944 36.000 4.18 0.00 0.00 1.52
3296 10425 6.542735 TGCGCCTATACACATATGGTTTAAAA 59.457 34.615 4.18 0.00 0.00 1.52
3297 10426 7.067129 TGCGCCTATACACATATGGTTTAAAAA 59.933 33.333 4.18 0.00 0.00 1.94
3339 10468 7.938563 AGAGTGAACATAGAGAATATTTCGC 57.061 36.000 0.00 0.00 34.02 4.70
3340 10469 7.492524 AGAGTGAACATAGAGAATATTTCGCA 58.507 34.615 0.00 0.00 34.02 5.10
3341 10470 7.981789 AGAGTGAACATAGAGAATATTTCGCAA 59.018 33.333 0.00 0.00 34.02 4.85
3342 10471 7.910304 AGTGAACATAGAGAATATTTCGCAAC 58.090 34.615 0.00 0.00 34.02 4.17
3343 10472 7.011482 AGTGAACATAGAGAATATTTCGCAACC 59.989 37.037 0.00 0.00 34.02 3.77
3344 10473 5.907197 ACATAGAGAATATTTCGCAACCG 57.093 39.130 0.00 0.00 34.02 4.44
3345 10474 5.597806 ACATAGAGAATATTTCGCAACCGA 58.402 37.500 0.00 0.00 42.66 4.69
3346 10475 6.223852 ACATAGAGAATATTTCGCAACCGAT 58.776 36.000 0.00 0.00 43.97 4.18
3347 10476 7.375834 ACATAGAGAATATTTCGCAACCGATA 58.624 34.615 0.00 0.00 43.97 2.92
3348 10477 8.035394 ACATAGAGAATATTTCGCAACCGATAT 58.965 33.333 0.00 0.00 43.97 1.63
3349 10478 9.516314 CATAGAGAATATTTCGCAACCGATATA 57.484 33.333 0.00 0.00 43.97 0.86
3351 10480 8.827177 AGAGAATATTTCGCAACCGATATAAA 57.173 30.769 0.00 0.00 43.97 1.40
3352 10481 8.709646 AGAGAATATTTCGCAACCGATATAAAC 58.290 33.333 0.00 0.61 43.97 2.01
3353 10482 8.373048 AGAATATTTCGCAACCGATATAAACA 57.627 30.769 0.00 0.00 43.97 2.83
3354 10483 8.495949 AGAATATTTCGCAACCGATATAAACAG 58.504 33.333 0.00 0.00 43.97 3.16
3355 10484 4.868450 TTTCGCAACCGATATAAACAGG 57.132 40.909 0.00 0.00 43.97 4.00
3356 10485 3.530265 TCGCAACCGATATAAACAGGT 57.470 42.857 0.00 0.00 38.82 4.00
3357 10486 3.191669 TCGCAACCGATATAAACAGGTG 58.808 45.455 0.00 0.00 38.82 4.00
3358 10487 2.286833 CGCAACCGATATAAACAGGTGG 59.713 50.000 0.00 0.00 37.03 4.61
3359 10488 2.032924 GCAACCGATATAAACAGGTGGC 59.967 50.000 0.00 0.00 45.18 5.01
3360 10489 2.616842 CAACCGATATAAACAGGTGGCC 59.383 50.000 0.00 0.00 37.03 5.36
3361 10490 2.124411 ACCGATATAAACAGGTGGCCT 58.876 47.619 3.32 0.00 35.36 5.19
3362 10491 2.104281 ACCGATATAAACAGGTGGCCTC 59.896 50.000 3.32 0.00 35.36 4.70
3363 10492 2.104111 CCGATATAAACAGGTGGCCTCA 59.896 50.000 3.32 0.00 0.00 3.86
3364 10493 3.244561 CCGATATAAACAGGTGGCCTCAT 60.245 47.826 3.32 0.00 0.00 2.90
3365 10494 4.389374 CGATATAAACAGGTGGCCTCATT 58.611 43.478 3.32 0.00 0.00 2.57
3366 10495 4.214119 CGATATAAACAGGTGGCCTCATTG 59.786 45.833 3.32 5.64 0.00 2.82
3367 10496 2.969821 TAAACAGGTGGCCTCATTGT 57.030 45.000 3.32 6.33 0.00 2.71
3368 10497 2.086610 AAACAGGTGGCCTCATTGTT 57.913 45.000 16.59 16.59 36.09 2.83
3369 10498 1.620822 AACAGGTGGCCTCATTGTTC 58.379 50.000 16.59 0.00 32.11 3.18
3370 10499 0.251341 ACAGGTGGCCTCATTGTTCC 60.251 55.000 3.32 0.00 0.00 3.62
3371 10500 0.251297 CAGGTGGCCTCATTGTTCCA 60.251 55.000 3.32 0.00 0.00 3.53
3372 10501 0.482446 AGGTGGCCTCATTGTTCCAA 59.518 50.000 3.32 0.00 0.00 3.53
3373 10502 1.077663 AGGTGGCCTCATTGTTCCAAT 59.922 47.619 3.32 0.00 0.00 3.16
3374 10503 1.205417 GGTGGCCTCATTGTTCCAATG 59.795 52.381 3.32 10.04 0.00 2.82
3375 10504 1.895131 GTGGCCTCATTGTTCCAATGT 59.105 47.619 14.62 0.00 0.00 2.71
3376 10505 3.088532 GTGGCCTCATTGTTCCAATGTA 58.911 45.455 14.62 3.86 0.00 2.29
3377 10506 3.701040 GTGGCCTCATTGTTCCAATGTAT 59.299 43.478 14.62 0.00 0.00 2.29
3378 10507 4.160252 GTGGCCTCATTGTTCCAATGTATT 59.840 41.667 14.62 0.00 0.00 1.89
3379 10508 4.776837 TGGCCTCATTGTTCCAATGTATTT 59.223 37.500 14.62 0.00 0.00 1.40
3380 10509 5.111293 GGCCTCATTGTTCCAATGTATTTG 58.889 41.667 14.62 4.24 34.93 2.32
3381 10510 4.567959 GCCTCATTGTTCCAATGTATTTGC 59.432 41.667 14.62 8.90 33.73 3.68
3382 10511 5.722263 CCTCATTGTTCCAATGTATTTGCA 58.278 37.500 14.62 0.00 33.73 4.08
3383 10512 5.577945 CCTCATTGTTCCAATGTATTTGCAC 59.422 40.000 14.62 0.00 33.73 4.57
3384 10513 6.343716 TCATTGTTCCAATGTATTTGCACT 57.656 33.333 14.62 0.00 33.73 4.40
3385 10514 7.362834 CCTCATTGTTCCAATGTATTTGCACTA 60.363 37.037 14.62 0.00 33.73 2.74
3386 10515 7.890515 TCATTGTTCCAATGTATTTGCACTAA 58.109 30.769 14.62 0.00 33.73 2.24
3387 10516 7.812191 TCATTGTTCCAATGTATTTGCACTAAC 59.188 33.333 14.62 0.00 33.73 2.34
3388 10517 6.892658 TGTTCCAATGTATTTGCACTAACT 57.107 33.333 0.00 0.00 33.73 2.24
3389 10518 7.987750 TGTTCCAATGTATTTGCACTAACTA 57.012 32.000 0.00 0.00 33.73 2.24
3390 10519 8.039603 TGTTCCAATGTATTTGCACTAACTAG 57.960 34.615 0.00 0.00 33.73 2.57
3391 10520 7.663905 TGTTCCAATGTATTTGCACTAACTAGT 59.336 33.333 0.00 0.00 33.73 2.57
3392 10521 9.158233 GTTCCAATGTATTTGCACTAACTAGTA 57.842 33.333 0.00 0.00 32.44 1.82
3393 10522 9.727859 TTCCAATGTATTTGCACTAACTAGTAA 57.272 29.630 0.00 0.00 32.44 2.24
3394 10523 9.727859 TCCAATGTATTTGCACTAACTAGTAAA 57.272 29.630 0.00 0.00 32.44 2.01
3425 10554 8.980143 ATTAAAATCACGACACTTATTTTGGG 57.020 30.769 0.00 0.00 34.37 4.12
3426 10555 6.642707 AAAATCACGACACTTATTTTGGGA 57.357 33.333 0.00 0.00 31.99 4.37
3427 10556 6.834168 AAATCACGACACTTATTTTGGGAT 57.166 33.333 0.00 0.00 0.00 3.85
3428 10557 5.818136 ATCACGACACTTATTTTGGGATG 57.182 39.130 0.00 0.00 0.00 3.51
3429 10558 4.900684 TCACGACACTTATTTTGGGATGA 58.099 39.130 0.00 0.00 0.00 2.92
3430 10559 5.309638 TCACGACACTTATTTTGGGATGAA 58.690 37.500 0.00 0.00 0.00 2.57
3431 10560 5.411361 TCACGACACTTATTTTGGGATGAAG 59.589 40.000 0.00 0.00 0.00 3.02
3432 10561 4.700213 ACGACACTTATTTTGGGATGAAGG 59.300 41.667 0.00 0.00 0.00 3.46
3433 10562 4.096382 CGACACTTATTTTGGGATGAAGGG 59.904 45.833 0.00 0.00 0.00 3.95
3434 10563 5.261216 GACACTTATTTTGGGATGAAGGGA 58.739 41.667 0.00 0.00 0.00 4.20
3435 10564 5.264395 ACACTTATTTTGGGATGAAGGGAG 58.736 41.667 0.00 0.00 0.00 4.30
3436 10565 5.222337 ACACTTATTTTGGGATGAAGGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
3437 10566 6.011981 ACACTTATTTTGGGATGAAGGGAGTA 60.012 38.462 0.00 0.00 0.00 2.59
3438 10567 6.543831 CACTTATTTTGGGATGAAGGGAGTAG 59.456 42.308 0.00 0.00 0.00 2.57
3439 10568 3.366052 TTTTGGGATGAAGGGAGTAGC 57.634 47.619 0.00 0.00 0.00 3.58
3440 10569 0.830648 TTGGGATGAAGGGAGTAGCG 59.169 55.000 0.00 0.00 0.00 4.26
3441 10570 0.032515 TGGGATGAAGGGAGTAGCGA 60.033 55.000 0.00 0.00 0.00 4.93
3442 10571 1.120530 GGGATGAAGGGAGTAGCGAA 58.879 55.000 0.00 0.00 0.00 4.70
3443 10572 1.485066 GGGATGAAGGGAGTAGCGAAA 59.515 52.381 0.00 0.00 0.00 3.46
3444 10573 2.104963 GGGATGAAGGGAGTAGCGAAAT 59.895 50.000 0.00 0.00 0.00 2.17
3445 10574 3.433740 GGGATGAAGGGAGTAGCGAAATT 60.434 47.826 0.00 0.00 0.00 1.82
3446 10575 4.202326 GGGATGAAGGGAGTAGCGAAATTA 60.202 45.833 0.00 0.00 0.00 1.40
3447 10576 5.513267 GGGATGAAGGGAGTAGCGAAATTAT 60.513 44.000 0.00 0.00 0.00 1.28
3448 10577 6.295688 GGGATGAAGGGAGTAGCGAAATTATA 60.296 42.308 0.00 0.00 0.00 0.98
3449 10578 6.814146 GGATGAAGGGAGTAGCGAAATTATAG 59.186 42.308 0.00 0.00 0.00 1.31
3450 10579 5.539048 TGAAGGGAGTAGCGAAATTATAGC 58.461 41.667 0.00 0.00 0.00 2.97
3451 10580 5.069914 TGAAGGGAGTAGCGAAATTATAGCA 59.930 40.000 0.00 0.00 0.00 3.49
3452 10581 5.746990 AGGGAGTAGCGAAATTATAGCAT 57.253 39.130 0.00 0.00 0.00 3.79
3453 10582 6.115448 AGGGAGTAGCGAAATTATAGCATT 57.885 37.500 0.00 0.00 0.00 3.56
3454 10583 5.934625 AGGGAGTAGCGAAATTATAGCATTG 59.065 40.000 0.00 0.00 0.00 2.82
3455 10584 5.390991 GGGAGTAGCGAAATTATAGCATTGC 60.391 44.000 0.00 0.00 0.00 3.56
3456 10585 5.179368 GGAGTAGCGAAATTATAGCATTGCA 59.821 40.000 11.91 0.00 0.00 4.08
3457 10586 6.293407 GGAGTAGCGAAATTATAGCATTGCAA 60.293 38.462 11.91 0.00 0.00 4.08
3458 10587 7.206981 AGTAGCGAAATTATAGCATTGCAAT 57.793 32.000 11.91 5.99 0.00 3.56
3459 10588 7.080099 AGTAGCGAAATTATAGCATTGCAATG 58.920 34.615 30.92 30.92 39.40 2.82
3460 10589 5.835257 AGCGAAATTATAGCATTGCAATGT 58.165 33.333 33.67 24.01 38.65 2.71
3461 10590 6.275335 AGCGAAATTATAGCATTGCAATGTT 58.725 32.000 33.67 30.99 38.65 2.71
3462 10591 6.418819 AGCGAAATTATAGCATTGCAATGTTC 59.581 34.615 33.67 25.67 38.65 3.18
3463 10592 6.198778 GCGAAATTATAGCATTGCAATGTTCA 59.801 34.615 33.67 21.82 38.65 3.18
3464 10593 7.095940 GCGAAATTATAGCATTGCAATGTTCAT 60.096 33.333 33.67 25.66 38.65 2.57
3465 10594 9.396938 CGAAATTATAGCATTGCAATGTTCATA 57.603 29.630 33.67 24.83 38.65 2.15
3471 10600 6.671614 AGCATTGCAATGTTCATATTTTGG 57.328 33.333 33.67 10.16 38.65 3.28
3472 10601 5.587043 AGCATTGCAATGTTCATATTTTGGG 59.413 36.000 33.67 9.76 38.65 4.12
3473 10602 5.585445 GCATTGCAATGTTCATATTTTGGGA 59.415 36.000 33.67 0.00 38.65 4.37
3474 10603 6.457257 GCATTGCAATGTTCATATTTTGGGAC 60.457 38.462 33.67 12.62 38.65 4.46
3475 10604 4.742417 TGCAATGTTCATATTTTGGGACG 58.258 39.130 0.00 0.00 0.00 4.79
3476 10605 4.111916 GCAATGTTCATATTTTGGGACGG 58.888 43.478 0.00 0.00 0.00 4.79
3477 10606 4.142271 GCAATGTTCATATTTTGGGACGGA 60.142 41.667 0.00 0.00 0.00 4.69
3478 10607 5.623368 GCAATGTTCATATTTTGGGACGGAA 60.623 40.000 0.00 0.00 0.00 4.30
3479 10608 6.393990 CAATGTTCATATTTTGGGACGGAAA 58.606 36.000 0.00 0.00 0.00 3.13
3480 10609 5.637006 TGTTCATATTTTGGGACGGAAAG 57.363 39.130 0.00 0.00 0.00 2.62
3481 10610 4.461081 TGTTCATATTTTGGGACGGAAAGG 59.539 41.667 0.00 0.00 0.00 3.11
3482 10611 4.577988 TCATATTTTGGGACGGAAAGGA 57.422 40.909 0.00 0.00 0.00 3.36
3483 10612 4.924625 TCATATTTTGGGACGGAAAGGAA 58.075 39.130 0.00 0.00 0.00 3.36
3484 10613 5.326069 TCATATTTTGGGACGGAAAGGAAA 58.674 37.500 0.00 0.00 0.00 3.13
3485 10614 5.417580 TCATATTTTGGGACGGAAAGGAAAG 59.582 40.000 0.00 0.00 0.00 2.62
3486 10615 1.989706 TTTGGGACGGAAAGGAAAGG 58.010 50.000 0.00 0.00 0.00 3.11
3487 10616 0.111639 TTGGGACGGAAAGGAAAGGG 59.888 55.000 0.00 0.00 0.00 3.95
3488 10617 1.001269 GGGACGGAAAGGAAAGGGG 60.001 63.158 0.00 0.00 0.00 4.79
3489 10618 1.001269 GGACGGAAAGGAAAGGGGG 60.001 63.158 0.00 0.00 0.00 5.40
3490 10619 1.765727 GACGGAAAGGAAAGGGGGT 59.234 57.895 0.00 0.00 0.00 4.95
3491 10620 0.986527 GACGGAAAGGAAAGGGGGTA 59.013 55.000 0.00 0.00 0.00 3.69
3492 10621 1.562942 GACGGAAAGGAAAGGGGGTAT 59.437 52.381 0.00 0.00 0.00 2.73
3493 10622 2.773661 GACGGAAAGGAAAGGGGGTATA 59.226 50.000 0.00 0.00 0.00 1.47
3494 10623 3.393609 GACGGAAAGGAAAGGGGGTATAT 59.606 47.826 0.00 0.00 0.00 0.86
3495 10624 4.569902 ACGGAAAGGAAAGGGGGTATATA 58.430 43.478 0.00 0.00 0.00 0.86
3496 10625 4.349048 ACGGAAAGGAAAGGGGGTATATAC 59.651 45.833 4.14 4.14 0.00 1.47
3497 10626 4.263199 CGGAAAGGAAAGGGGGTATATACC 60.263 50.000 21.88 21.88 45.71 2.73
3507 10636 2.056094 GGTATATACCGTGTCACGCC 57.944 55.000 20.01 9.78 40.91 5.68
3508 10637 1.610522 GGTATATACCGTGTCACGCCT 59.389 52.381 20.01 9.21 40.91 5.52
3509 10638 2.035066 GGTATATACCGTGTCACGCCTT 59.965 50.000 20.01 8.53 40.91 4.35
3510 10639 3.253188 GGTATATACCGTGTCACGCCTTA 59.747 47.826 20.01 10.41 40.91 2.69
3511 10640 3.637998 ATATACCGTGTCACGCCTTAG 57.362 47.619 20.01 8.35 40.91 2.18
3512 10641 1.180029 ATACCGTGTCACGCCTTAGT 58.820 50.000 20.01 13.69 40.91 2.24
3513 10642 0.961019 TACCGTGTCACGCCTTAGTT 59.039 50.000 20.01 0.40 40.91 2.24
3514 10643 0.319297 ACCGTGTCACGCCTTAGTTC 60.319 55.000 20.01 0.00 40.91 3.01
3515 10644 0.319211 CCGTGTCACGCCTTAGTTCA 60.319 55.000 20.01 0.00 40.91 3.18
3516 10645 1.671850 CCGTGTCACGCCTTAGTTCAT 60.672 52.381 20.01 0.00 40.91 2.57
3517 10646 1.654105 CGTGTCACGCCTTAGTTCATC 59.346 52.381 13.22 0.00 33.65 2.92
3518 10647 2.000447 GTGTCACGCCTTAGTTCATCC 59.000 52.381 0.00 0.00 0.00 3.51
3519 10648 1.066430 TGTCACGCCTTAGTTCATCCC 60.066 52.381 0.00 0.00 0.00 3.85
3520 10649 1.207329 GTCACGCCTTAGTTCATCCCT 59.793 52.381 0.00 0.00 0.00 4.20
3521 10650 1.207089 TCACGCCTTAGTTCATCCCTG 59.793 52.381 0.00 0.00 0.00 4.45
3522 10651 1.066143 CACGCCTTAGTTCATCCCTGT 60.066 52.381 0.00 0.00 0.00 4.00
3523 10652 1.066143 ACGCCTTAGTTCATCCCTGTG 60.066 52.381 0.00 0.00 0.00 3.66
3524 10653 1.743772 CGCCTTAGTTCATCCCTGTGG 60.744 57.143 0.00 0.00 0.00 4.17
3525 10654 2.019156 GCCTTAGTTCATCCCTGTGGC 61.019 57.143 0.00 0.00 0.00 5.01
3526 10655 1.656652 CTTAGTTCATCCCTGTGGCG 58.343 55.000 0.00 0.00 0.00 5.69
3527 10656 0.251916 TTAGTTCATCCCTGTGGCGG 59.748 55.000 0.00 0.00 0.00 6.13
3528 10657 0.616395 TAGTTCATCCCTGTGGCGGA 60.616 55.000 0.00 0.00 0.00 5.54
3529 10658 1.745489 GTTCATCCCTGTGGCGGAC 60.745 63.158 0.00 0.00 30.39 4.79
3530 10659 2.966732 TTCATCCCTGTGGCGGACC 61.967 63.158 0.00 0.00 30.39 4.46
3531 10660 3.402681 CATCCCTGTGGCGGACCT 61.403 66.667 0.00 0.00 36.63 3.85
3532 10661 2.063979 CATCCCTGTGGCGGACCTA 61.064 63.158 0.00 0.00 36.63 3.08
3533 10662 1.762460 ATCCCTGTGGCGGACCTAG 60.762 63.158 0.00 0.00 36.63 3.02
3534 10663 2.238319 ATCCCTGTGGCGGACCTAGA 62.238 60.000 0.00 0.00 36.63 2.43
3535 10664 1.987855 CCCTGTGGCGGACCTAGAA 60.988 63.158 0.00 0.00 36.63 2.10
3536 10665 1.550130 CCCTGTGGCGGACCTAGAAA 61.550 60.000 0.00 0.00 36.63 2.52
3537 10666 0.541863 CCTGTGGCGGACCTAGAAAT 59.458 55.000 0.00 0.00 36.63 2.17
3538 10667 1.760613 CCTGTGGCGGACCTAGAAATA 59.239 52.381 0.00 0.00 36.63 1.40
3539 10668 2.169769 CCTGTGGCGGACCTAGAAATAA 59.830 50.000 0.00 0.00 36.63 1.40
3540 10669 3.370103 CCTGTGGCGGACCTAGAAATAAA 60.370 47.826 0.00 0.00 36.63 1.40
3541 10670 4.258543 CTGTGGCGGACCTAGAAATAAAA 58.741 43.478 0.00 0.00 36.63 1.52
3542 10671 4.850680 TGTGGCGGACCTAGAAATAAAAT 58.149 39.130 0.00 0.00 36.63 1.82
3543 10672 4.638421 TGTGGCGGACCTAGAAATAAAATG 59.362 41.667 0.00 0.00 36.63 2.32
3544 10673 4.879545 GTGGCGGACCTAGAAATAAAATGA 59.120 41.667 0.00 0.00 36.63 2.57
3545 10674 5.007724 GTGGCGGACCTAGAAATAAAATGAG 59.992 44.000 0.00 0.00 36.63 2.90
3546 10675 5.104693 TGGCGGACCTAGAAATAAAATGAGA 60.105 40.000 0.00 0.00 36.63 3.27
3547 10676 5.467063 GGCGGACCTAGAAATAAAATGAGAG 59.533 44.000 0.00 0.00 0.00 3.20
3548 10677 6.049790 GCGGACCTAGAAATAAAATGAGAGT 58.950 40.000 0.00 0.00 0.00 3.24
3549 10678 6.018669 GCGGACCTAGAAATAAAATGAGAGTG 60.019 42.308 0.00 0.00 0.00 3.51
3550 10679 7.042335 CGGACCTAGAAATAAAATGAGAGTGT 58.958 38.462 0.00 0.00 0.00 3.55
3551 10680 7.010552 CGGACCTAGAAATAAAATGAGAGTGTG 59.989 40.741 0.00 0.00 0.00 3.82
3552 10681 7.201652 GGACCTAGAAATAAAATGAGAGTGTGC 60.202 40.741 0.00 0.00 0.00 4.57
3553 10682 7.168219 ACCTAGAAATAAAATGAGAGTGTGCA 58.832 34.615 0.00 0.00 0.00 4.57
3554 10683 7.119846 ACCTAGAAATAAAATGAGAGTGTGCAC 59.880 37.037 10.75 10.75 0.00 4.57
3555 10684 6.882610 AGAAATAAAATGAGAGTGTGCACA 57.117 33.333 17.42 17.42 0.00 4.57
3556 10685 6.672147 AGAAATAAAATGAGAGTGTGCACAC 58.328 36.000 37.13 37.13 46.77 3.82
3573 10702 9.124807 GTGTGCACACTTTAAAATAATAAGGTC 57.875 33.333 36.77 8.68 43.25 3.85
3574 10703 9.073475 TGTGCACACTTTAAAATAATAAGGTCT 57.927 29.630 17.42 0.00 0.00 3.85
3591 10720 9.487442 AATAAGGTCTATTTTAATTGGCTTGGA 57.513 29.630 0.00 0.00 0.00 3.53
3592 10721 6.775594 AGGTCTATTTTAATTGGCTTGGAC 57.224 37.500 0.00 0.00 0.00 4.02
3593 10722 5.656859 AGGTCTATTTTAATTGGCTTGGACC 59.343 40.000 0.00 0.00 39.54 4.46
3594 10723 5.420739 GGTCTATTTTAATTGGCTTGGACCA 59.579 40.000 0.00 0.00 39.20 4.02
3595 10724 6.405842 GGTCTATTTTAATTGGCTTGGACCAG 60.406 42.308 0.00 0.00 41.82 4.00
3596 10725 3.676291 TTTTAATTGGCTTGGACCAGC 57.324 42.857 7.23 7.23 41.82 4.85
3605 10734 3.961480 GCTTGGACCAGCCTTAAAAAT 57.039 42.857 0.00 0.00 37.63 1.82
3606 10735 3.849911 GCTTGGACCAGCCTTAAAAATC 58.150 45.455 0.00 0.00 37.63 2.17
3607 10736 3.258123 GCTTGGACCAGCCTTAAAAATCA 59.742 43.478 0.00 0.00 37.63 2.57
3608 10737 4.619160 GCTTGGACCAGCCTTAAAAATCAG 60.619 45.833 0.00 0.00 37.63 2.90
3609 10738 2.825532 TGGACCAGCCTTAAAAATCAGC 59.174 45.455 0.00 0.00 37.63 4.26
3610 10739 3.092301 GGACCAGCCTTAAAAATCAGCT 58.908 45.455 0.00 0.00 0.00 4.24
3611 10740 4.263727 TGGACCAGCCTTAAAAATCAGCTA 60.264 41.667 0.00 0.00 37.63 3.32
3612 10741 4.889995 GGACCAGCCTTAAAAATCAGCTAT 59.110 41.667 0.00 0.00 31.23 2.97
3613 10742 5.360999 GGACCAGCCTTAAAAATCAGCTATT 59.639 40.000 0.00 0.00 31.23 1.73
3614 10743 6.127338 GGACCAGCCTTAAAAATCAGCTATTT 60.127 38.462 0.00 0.00 39.56 1.40
3654 10783 3.467374 TTTCCAAAATTCTGGGTGTGC 57.533 42.857 0.00 0.00 37.06 4.57
3655 10784 1.337118 TCCAAAATTCTGGGTGTGCC 58.663 50.000 0.00 0.00 37.06 5.01
3656 10785 1.047002 CCAAAATTCTGGGTGTGCCA 58.953 50.000 0.00 0.00 36.17 4.92
3657 10786 1.624813 CCAAAATTCTGGGTGTGCCAT 59.375 47.619 0.00 0.00 36.17 4.40
3658 10787 2.613474 CCAAAATTCTGGGTGTGCCATG 60.613 50.000 0.00 0.00 36.17 3.66
3659 10788 1.269012 AAATTCTGGGTGTGCCATGG 58.731 50.000 7.63 7.63 36.17 3.66
3660 10789 1.259840 AATTCTGGGTGTGCCATGGC 61.260 55.000 30.54 30.54 42.35 4.40
3681 10810 4.029472 CCCGCTAGGTACACCACT 57.971 61.111 0.38 0.00 38.89 4.00
3682 10811 1.515954 CCCGCTAGGTACACCACTG 59.484 63.158 0.38 0.00 38.89 3.66
3683 10812 1.515954 CCGCTAGGTACACCACTGG 59.484 63.158 0.38 0.00 38.89 4.00
3684 10813 1.255667 CCGCTAGGTACACCACTGGT 61.256 60.000 0.38 0.00 38.89 4.00
3685 10814 0.606604 CGCTAGGTACACCACTGGTT 59.393 55.000 0.00 0.00 38.89 3.67
3686 10815 1.403780 CGCTAGGTACACCACTGGTTC 60.404 57.143 0.00 0.00 38.89 3.62
3687 10816 1.621814 GCTAGGTACACCACTGGTTCA 59.378 52.381 0.00 0.00 38.89 3.18
3688 10817 2.612221 GCTAGGTACACCACTGGTTCAC 60.612 54.545 0.00 0.00 38.89 3.18
3689 10818 0.763035 AGGTACACCACTGGTTCACC 59.237 55.000 16.06 16.06 37.28 4.02
3690 10819 0.250597 GGTACACCACTGGTTCACCC 60.251 60.000 13.93 2.98 33.29 4.61
3691 10820 0.763035 GTACACCACTGGTTCACCCT 59.237 55.000 0.00 0.00 31.02 4.34
3692 10821 1.972795 GTACACCACTGGTTCACCCTA 59.027 52.381 0.00 0.00 31.02 3.53
3693 10822 1.742308 ACACCACTGGTTCACCCTAT 58.258 50.000 0.00 0.00 31.02 2.57
3694 10823 2.910544 ACACCACTGGTTCACCCTATA 58.089 47.619 0.00 0.00 31.02 1.31
3695 10824 2.570302 ACACCACTGGTTCACCCTATAC 59.430 50.000 0.00 0.00 31.02 1.47
3696 10825 2.569853 CACCACTGGTTCACCCTATACA 59.430 50.000 0.00 0.00 31.02 2.29
3697 10826 3.199946 CACCACTGGTTCACCCTATACAT 59.800 47.826 0.00 0.00 31.02 2.29
3698 10827 3.199946 ACCACTGGTTCACCCTATACATG 59.800 47.826 0.00 0.00 27.29 3.21
3699 10828 3.433598 CCACTGGTTCACCCTATACATGG 60.434 52.174 0.00 0.00 34.29 3.66
3700 10829 3.199946 CACTGGTTCACCCTATACATGGT 59.800 47.826 0.00 0.00 34.40 3.55
3701 10830 3.850173 ACTGGTTCACCCTATACATGGTT 59.150 43.478 0.00 0.00 30.70 3.67
3702 10831 4.291249 ACTGGTTCACCCTATACATGGTTT 59.709 41.667 0.00 0.00 30.70 3.27
3703 10832 4.850680 TGGTTCACCCTATACATGGTTTC 58.149 43.478 0.00 0.00 30.70 2.78
3704 10833 4.204799 GGTTCACCCTATACATGGTTTCC 58.795 47.826 0.00 0.00 30.70 3.13
3705 10834 3.830744 TCACCCTATACATGGTTTCCG 57.169 47.619 0.00 0.00 30.70 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 0.403271 ACTGGCAGCAAGGTCTTCAT 59.597 50.000 15.89 0.00 0.00 2.57
513 516 0.035439 ATAAGGTTGGCGTCACAGGG 60.035 55.000 0.00 0.00 0.00 4.45
531 534 4.689345 CGGAGAAACTACGGAGAACAAAAT 59.311 41.667 0.00 0.00 33.64 1.82
571 574 3.055719 CGCCCACCGCAAGACAAT 61.056 61.111 0.00 0.00 43.02 2.71
602 605 5.644206 TGCAGAACAACACTACACTTACAAA 59.356 36.000 0.00 0.00 0.00 2.83
674 683 4.335315 AGCAACGAAAGAAACAACATGAGA 59.665 37.500 0.00 0.00 0.00 3.27
777 786 2.747460 TGACGCAGCCCATGAAGC 60.747 61.111 0.00 0.00 0.00 3.86
778 787 2.401766 GGTGACGCAGCCCATGAAG 61.402 63.158 0.00 0.00 0.00 3.02
779 788 2.359850 GGTGACGCAGCCCATGAA 60.360 61.111 0.00 0.00 0.00 2.57
844 853 2.941480 TCCTTGACGTATAGGAGTCCC 58.059 52.381 12.78 0.00 35.66 4.46
845 854 4.796618 GCAATCCTTGACGTATAGGAGTCC 60.797 50.000 19.43 0.00 43.46 3.85
846 855 4.038162 AGCAATCCTTGACGTATAGGAGTC 59.962 45.833 19.43 12.56 43.46 3.36
847 856 3.961408 AGCAATCCTTGACGTATAGGAGT 59.039 43.478 19.43 15.61 43.46 3.85
848 857 4.592485 AGCAATCCTTGACGTATAGGAG 57.408 45.455 19.43 10.70 43.46 3.69
849 858 7.956328 ATATAGCAATCCTTGACGTATAGGA 57.044 36.000 17.64 17.64 44.29 2.94
853 862 8.639761 GGGTATATATAGCAATCCTTGACGTAT 58.360 37.037 20.52 0.00 32.63 3.06
854 863 7.069085 GGGGTATATATAGCAATCCTTGACGTA 59.931 40.741 20.52 0.00 32.63 3.57
855 864 6.127140 GGGGTATATATAGCAATCCTTGACGT 60.127 42.308 20.52 0.00 32.63 4.34
856 865 6.281405 GGGGTATATATAGCAATCCTTGACG 58.719 44.000 20.52 0.00 32.63 4.35
857 866 6.387220 AGGGGGTATATATAGCAATCCTTGAC 59.613 42.308 20.52 3.25 32.63 3.18
897 923 1.202758 TGGTGGTGATTGGTGTGAGTC 60.203 52.381 0.00 0.00 0.00 3.36
1465 3716 7.534085 TGCCACGTTCAGATAGTTAATTAAG 57.466 36.000 0.00 0.00 0.00 1.85
1544 7558 7.775120 AGTGCCATCTTCATCGAAATATTTTT 58.225 30.769 1.43 0.00 0.00 1.94
1548 7854 7.120285 CCATAAGTGCCATCTTCATCGAAATAT 59.880 37.037 0.00 0.00 0.00 1.28
1558 7864 5.311265 TCATCATCCATAAGTGCCATCTTC 58.689 41.667 0.00 0.00 0.00 2.87
1565 7871 4.036027 CCACTGTTCATCATCCATAAGTGC 59.964 45.833 0.00 0.00 33.97 4.40
1566 7872 5.188434 ACCACTGTTCATCATCCATAAGTG 58.812 41.667 0.00 0.00 34.85 3.16
1578 8006 3.682858 CCGACGAATTAACCACTGTTCAT 59.317 43.478 0.00 0.00 35.87 2.57
1579 8007 3.061322 CCGACGAATTAACCACTGTTCA 58.939 45.455 0.00 0.00 35.87 3.18
1580 8008 2.159747 GCCGACGAATTAACCACTGTTC 60.160 50.000 0.00 0.00 35.87 3.18
1742 8756 3.838795 CGCTTCTTCCCGAACGCG 61.839 66.667 3.53 3.53 40.26 6.01
1811 8825 2.409870 GGGGATGTTGAAGCCGCTG 61.410 63.158 0.00 0.00 0.00 5.18
1866 8880 4.166011 GCGCTTCATGCCGGTGAC 62.166 66.667 1.90 0.00 38.78 3.67
2159 9247 1.817357 CCTGCAGCTTCTTCATCACA 58.183 50.000 8.66 0.00 0.00 3.58
2255 9343 1.747709 CCTCCTTGATCACCAGCTTG 58.252 55.000 0.00 0.00 0.00 4.01
2337 9425 2.660802 CACCGTGTACCCCTCCAC 59.339 66.667 0.00 0.00 0.00 4.02
2708 9796 2.354539 ATGCACGCAACCAAACGC 60.355 55.556 0.00 0.00 0.00 4.84
2735 9823 1.441732 CGAAGCCAGCATGCATAGCA 61.442 55.000 21.98 0.00 44.86 3.49
2789 9885 1.952635 GAACCGACGGACACACACC 60.953 63.158 23.38 0.00 0.00 4.16
2806 9902 2.176148 TGGTAGATACAGATGGGGACGA 59.824 50.000 0.00 0.00 0.00 4.20
2818 9914 1.469126 CGCGCGTGTGTGGTAGATAC 61.469 60.000 24.19 0.00 0.00 2.24
2849 9949 0.109597 ACGCACGTACGAAACCCTAG 60.110 55.000 24.41 6.49 36.70 3.02
2856 9956 3.388406 CACGCACGCACGTACGAA 61.388 61.111 24.41 0.00 46.34 3.85
2868 9994 2.736192 CACTCAATCATACACACACGCA 59.264 45.455 0.00 0.00 0.00 5.24
2881 10010 6.437928 TCAAATACAAGCAACACACTCAATC 58.562 36.000 0.00 0.00 0.00 2.67
2889 10018 5.173673 CACACACATCAAATACAAGCAACAC 59.826 40.000 0.00 0.00 0.00 3.32
2890 10019 5.280164 CACACACATCAAATACAAGCAACA 58.720 37.500 0.00 0.00 0.00 3.33
2900 10029 2.811431 CGGTACACCACACACATCAAAT 59.189 45.455 0.00 0.00 35.14 2.32
2901 10030 2.214347 CGGTACACCACACACATCAAA 58.786 47.619 0.00 0.00 35.14 2.69
2920 10049 3.028019 ACTGCACGCACGTACACG 61.028 61.111 0.00 0.00 46.33 4.49
2921 10050 0.935831 TACACTGCACGCACGTACAC 60.936 55.000 0.00 0.00 0.00 2.90
2922 10051 0.248949 TTACACTGCACGCACGTACA 60.249 50.000 0.00 0.00 0.00 2.90
2923 10052 0.160182 GTTACACTGCACGCACGTAC 59.840 55.000 0.00 0.00 0.00 3.67
2924 10053 0.940519 GGTTACACTGCACGCACGTA 60.941 55.000 0.00 0.00 0.00 3.57
2925 10054 2.241880 GGTTACACTGCACGCACGT 61.242 57.895 0.00 0.00 0.00 4.49
2927 10056 0.110238 CATGGTTACACTGCACGCAC 60.110 55.000 0.00 0.00 0.00 5.34
2928 10057 1.233950 CCATGGTTACACTGCACGCA 61.234 55.000 2.57 0.00 0.00 5.24
2929 10058 0.953471 TCCATGGTTACACTGCACGC 60.953 55.000 12.58 0.00 0.00 5.34
2949 10078 2.775384 TGGCCCTCAATTATTACGGACT 59.225 45.455 0.00 0.00 0.00 3.85
2951 10080 3.556213 CGATGGCCCTCAATTATTACGGA 60.556 47.826 8.86 0.00 0.00 4.69
2954 10083 4.636206 GGATCGATGGCCCTCAATTATTAC 59.364 45.833 0.54 0.00 0.00 1.89
2977 10106 1.946156 CACGGGCAGATCGATCACG 60.946 63.158 26.47 23.65 41.26 4.35
2979 10108 0.179111 GTTCACGGGCAGATCGATCA 60.179 55.000 26.47 0.78 0.00 2.92
2980 10109 0.103208 AGTTCACGGGCAGATCGATC 59.897 55.000 17.91 17.91 0.00 3.69
2981 10110 0.179100 CAGTTCACGGGCAGATCGAT 60.179 55.000 0.00 0.00 0.00 3.59
2982 10111 1.215382 CAGTTCACGGGCAGATCGA 59.785 57.895 0.00 0.00 0.00 3.59
2983 10112 0.172578 TACAGTTCACGGGCAGATCG 59.827 55.000 0.00 0.00 0.00 3.69
2984 10113 2.101582 AGATACAGTTCACGGGCAGATC 59.898 50.000 0.00 0.00 0.00 2.75
2985 10114 2.111384 AGATACAGTTCACGGGCAGAT 58.889 47.619 0.00 0.00 0.00 2.90
2986 10115 1.204704 CAGATACAGTTCACGGGCAGA 59.795 52.381 0.00 0.00 0.00 4.26
2987 10116 1.645034 CAGATACAGTTCACGGGCAG 58.355 55.000 0.00 0.00 0.00 4.85
2988 10117 0.391130 GCAGATACAGTTCACGGGCA 60.391 55.000 0.00 0.00 0.00 5.36
2989 10118 0.391130 TGCAGATACAGTTCACGGGC 60.391 55.000 0.00 0.00 0.00 6.13
2990 10119 1.935873 CATGCAGATACAGTTCACGGG 59.064 52.381 0.00 0.00 0.00 5.28
2991 10120 2.892374 TCATGCAGATACAGTTCACGG 58.108 47.619 0.00 0.00 0.00 4.94
2992 10121 4.567959 TCATTCATGCAGATACAGTTCACG 59.432 41.667 0.00 0.00 0.00 4.35
2993 10122 6.615264 ATCATTCATGCAGATACAGTTCAC 57.385 37.500 0.00 0.00 0.00 3.18
2994 10123 6.038936 CCAATCATTCATGCAGATACAGTTCA 59.961 38.462 0.00 0.00 0.00 3.18
2995 10124 6.261603 TCCAATCATTCATGCAGATACAGTTC 59.738 38.462 0.00 0.00 0.00 3.01
2996 10125 6.124340 TCCAATCATTCATGCAGATACAGTT 58.876 36.000 0.00 0.00 0.00 3.16
3044 10173 4.155462 TCAAACAGGAGTACTAGCTACGTG 59.845 45.833 0.00 0.00 0.00 4.49
3050 10179 4.116238 GAGCATCAAACAGGAGTACTAGC 58.884 47.826 0.00 0.00 33.17 3.42
3051 10180 5.330455 TGAGCATCAAACAGGAGTACTAG 57.670 43.478 0.00 0.00 45.97 2.57
3068 10197 3.326006 AGGATGAAGTCTCAAACTGAGCA 59.674 43.478 0.00 0.00 43.95 4.26
3069 10198 3.683822 CAGGATGAAGTCTCAAACTGAGC 59.316 47.826 0.00 0.00 41.02 4.26
3070 10199 4.892433 ACAGGATGAAGTCTCAAACTGAG 58.108 43.478 13.17 0.00 42.12 3.35
3072 10201 4.151335 CGAACAGGATGAAGTCTCAAACTG 59.849 45.833 7.48 7.48 41.53 3.16
3073 10202 4.202264 ACGAACAGGATGAAGTCTCAAACT 60.202 41.667 0.00 0.00 39.69 2.66
3074 10203 4.058817 ACGAACAGGATGAAGTCTCAAAC 58.941 43.478 0.00 0.00 39.69 2.93
3075 10204 4.307432 GACGAACAGGATGAAGTCTCAAA 58.693 43.478 0.00 0.00 39.69 2.69
3076 10205 3.611766 CGACGAACAGGATGAAGTCTCAA 60.612 47.826 0.00 0.00 39.69 3.02
3077 10206 2.095212 CGACGAACAGGATGAAGTCTCA 60.095 50.000 0.00 0.00 39.69 3.27
3078 10207 2.095161 ACGACGAACAGGATGAAGTCTC 60.095 50.000 0.00 0.00 39.69 3.36
3079 10208 1.887198 ACGACGAACAGGATGAAGTCT 59.113 47.619 0.00 0.00 39.69 3.24
3080 10209 2.349297 ACGACGAACAGGATGAAGTC 57.651 50.000 0.00 0.00 39.69 3.01
3081 10210 2.800544 CAAACGACGAACAGGATGAAGT 59.199 45.455 0.00 0.00 39.69 3.01
3082 10211 2.800544 ACAAACGACGAACAGGATGAAG 59.199 45.455 0.00 0.00 39.69 3.02
3083 10212 2.798283 GACAAACGACGAACAGGATGAA 59.202 45.455 0.00 0.00 39.69 2.57
3084 10213 2.400399 GACAAACGACGAACAGGATGA 58.600 47.619 0.00 0.00 39.69 2.92
3085 10214 1.459592 GGACAAACGACGAACAGGATG 59.540 52.381 0.00 0.00 46.00 3.51
3086 10215 1.792006 GGACAAACGACGAACAGGAT 58.208 50.000 0.00 0.00 0.00 3.24
3087 10216 0.595567 CGGACAAACGACGAACAGGA 60.596 55.000 0.00 0.00 35.47 3.86
3088 10217 1.554042 CCGGACAAACGACGAACAGG 61.554 60.000 0.00 0.00 35.47 4.00
3127 10256 2.423538 GCCAGGTCAATAATGTGGTGAC 59.576 50.000 0.00 0.00 40.77 3.67
3133 10262 1.280710 TGACGGCCAGGTCAATAATGT 59.719 47.619 10.68 0.00 43.55 2.71
3134 10263 2.036958 TGACGGCCAGGTCAATAATG 57.963 50.000 10.68 0.00 43.55 1.90
3141 10270 2.617274 GCTTGTTGACGGCCAGGTC 61.617 63.158 2.24 3.27 37.45 3.85
3144 10273 1.453155 ATTAGCTTGTTGACGGCCAG 58.547 50.000 2.24 0.00 0.00 4.85
3151 10280 5.991933 TGGGCAATTAATTAGCTTGTTGA 57.008 34.783 16.74 0.00 0.00 3.18
3207 10336 9.750125 GTAATCATATCGCAATATCATGGAGTA 57.250 33.333 0.00 0.00 0.00 2.59
3208 10337 8.260114 TGTAATCATATCGCAATATCATGGAGT 58.740 33.333 0.00 0.00 0.00 3.85
3209 10338 8.652810 TGTAATCATATCGCAATATCATGGAG 57.347 34.615 0.00 0.00 0.00 3.86
3216 10345 9.981114 TCCGAATATGTAATCATATCGCAATAT 57.019 29.630 1.96 0.00 43.80 1.28
3217 10346 9.244799 GTCCGAATATGTAATCATATCGCAATA 57.755 33.333 1.96 0.00 43.80 1.90
3218 10347 7.981789 AGTCCGAATATGTAATCATATCGCAAT 59.018 33.333 1.96 0.00 43.80 3.56
3219 10348 7.275560 CAGTCCGAATATGTAATCATATCGCAA 59.724 37.037 1.96 0.00 43.80 4.85
3220 10349 6.751888 CAGTCCGAATATGTAATCATATCGCA 59.248 38.462 1.96 0.00 43.80 5.10
3221 10350 6.972901 TCAGTCCGAATATGTAATCATATCGC 59.027 38.462 1.96 0.00 43.80 4.58
3222 10351 8.911247 TTCAGTCCGAATATGTAATCATATCG 57.089 34.615 1.96 6.96 43.80 2.92
3230 10359 9.878667 TTCACTTATTTCAGTCCGAATATGTAA 57.121 29.630 0.00 0.00 32.32 2.41
3231 10360 9.309516 GTTCACTTATTTCAGTCCGAATATGTA 57.690 33.333 0.00 0.00 32.32 2.29
3232 10361 7.822334 TGTTCACTTATTTCAGTCCGAATATGT 59.178 33.333 0.00 0.00 32.32 2.29
3233 10362 8.196802 TGTTCACTTATTTCAGTCCGAATATG 57.803 34.615 0.00 0.00 32.32 1.78
3234 10363 8.786826 TTGTTCACTTATTTCAGTCCGAATAT 57.213 30.769 0.00 0.00 32.32 1.28
3235 10364 8.610248 TTTGTTCACTTATTTCAGTCCGAATA 57.390 30.769 0.00 0.00 32.32 1.75
3236 10365 7.504924 TTTGTTCACTTATTTCAGTCCGAAT 57.495 32.000 0.00 0.00 32.32 3.34
3237 10366 6.928979 TTTGTTCACTTATTTCAGTCCGAA 57.071 33.333 0.00 0.00 0.00 4.30
3238 10367 7.658167 TGTATTTGTTCACTTATTTCAGTCCGA 59.342 33.333 0.00 0.00 0.00 4.55
3239 10368 7.802738 TGTATTTGTTCACTTATTTCAGTCCG 58.197 34.615 0.00 0.00 0.00 4.79
3249 10378 8.855279 GCGCATTTTATTGTATTTGTTCACTTA 58.145 29.630 0.30 0.00 0.00 2.24
3250 10379 7.148656 GGCGCATTTTATTGTATTTGTTCACTT 60.149 33.333 10.83 0.00 0.00 3.16
3251 10380 6.310224 GGCGCATTTTATTGTATTTGTTCACT 59.690 34.615 10.83 0.00 0.00 3.41
3252 10381 6.310224 AGGCGCATTTTATTGTATTTGTTCAC 59.690 34.615 10.83 0.00 0.00 3.18
3253 10382 6.393990 AGGCGCATTTTATTGTATTTGTTCA 58.606 32.000 10.83 0.00 0.00 3.18
3254 10383 6.885735 AGGCGCATTTTATTGTATTTGTTC 57.114 33.333 10.83 0.00 0.00 3.18
3255 10384 9.458374 GTATAGGCGCATTTTATTGTATTTGTT 57.542 29.630 10.83 0.00 0.00 2.83
3256 10385 8.625651 TGTATAGGCGCATTTTATTGTATTTGT 58.374 29.630 10.83 0.00 0.00 2.83
3257 10386 8.901748 GTGTATAGGCGCATTTTATTGTATTTG 58.098 33.333 10.83 0.00 0.00 2.32
3258 10387 8.625651 TGTGTATAGGCGCATTTTATTGTATTT 58.374 29.630 10.83 0.00 0.00 1.40
3259 10388 8.160521 TGTGTATAGGCGCATTTTATTGTATT 57.839 30.769 10.83 0.00 0.00 1.89
3260 10389 7.737972 TGTGTATAGGCGCATTTTATTGTAT 57.262 32.000 10.83 0.00 0.00 2.29
3261 10390 7.737972 ATGTGTATAGGCGCATTTTATTGTA 57.262 32.000 10.83 0.00 36.31 2.41
3262 10391 6.633500 ATGTGTATAGGCGCATTTTATTGT 57.367 33.333 10.83 0.00 36.31 2.71
3263 10392 7.697710 CCATATGTGTATAGGCGCATTTTATTG 59.302 37.037 10.83 0.00 39.84 1.90
3264 10393 7.393234 ACCATATGTGTATAGGCGCATTTTATT 59.607 33.333 10.83 0.00 39.84 1.40
3265 10394 6.884295 ACCATATGTGTATAGGCGCATTTTAT 59.116 34.615 10.83 3.99 39.84 1.40
3266 10395 6.234920 ACCATATGTGTATAGGCGCATTTTA 58.765 36.000 10.83 0.00 39.84 1.52
3267 10396 5.070001 ACCATATGTGTATAGGCGCATTTT 58.930 37.500 10.83 0.00 39.84 1.82
3268 10397 4.651778 ACCATATGTGTATAGGCGCATTT 58.348 39.130 10.83 0.00 39.84 2.32
3269 10398 4.286297 ACCATATGTGTATAGGCGCATT 57.714 40.909 10.83 0.00 39.84 3.56
3270 10399 3.981071 ACCATATGTGTATAGGCGCAT 57.019 42.857 10.83 3.98 41.72 4.73
3271 10400 3.762407 AACCATATGTGTATAGGCGCA 57.238 42.857 10.83 0.00 0.00 6.09
3272 10401 6.548441 TTTAAACCATATGTGTATAGGCGC 57.452 37.500 0.00 0.00 0.00 6.53
3313 10442 9.464714 GCGAAATATTCTCTATGTTCACTCTTA 57.535 33.333 0.00 0.00 0.00 2.10
3314 10443 7.981789 TGCGAAATATTCTCTATGTTCACTCTT 59.018 33.333 0.00 0.00 0.00 2.85
3315 10444 7.492524 TGCGAAATATTCTCTATGTTCACTCT 58.507 34.615 0.00 0.00 0.00 3.24
3316 10445 7.700322 TGCGAAATATTCTCTATGTTCACTC 57.300 36.000 0.00 0.00 0.00 3.51
3317 10446 7.011482 GGTTGCGAAATATTCTCTATGTTCACT 59.989 37.037 0.00 0.00 0.00 3.41
3318 10447 7.126398 GGTTGCGAAATATTCTCTATGTTCAC 58.874 38.462 0.00 0.00 0.00 3.18
3319 10448 6.019075 CGGTTGCGAAATATTCTCTATGTTCA 60.019 38.462 0.00 0.00 0.00 3.18
3320 10449 6.200286 TCGGTTGCGAAATATTCTCTATGTTC 59.800 38.462 0.00 0.00 0.00 3.18
3321 10450 6.046593 TCGGTTGCGAAATATTCTCTATGTT 58.953 36.000 0.00 0.00 0.00 2.71
3322 10451 5.597806 TCGGTTGCGAAATATTCTCTATGT 58.402 37.500 0.00 0.00 0.00 2.29
3323 10452 6.712241 ATCGGTTGCGAAATATTCTCTATG 57.288 37.500 0.00 0.00 0.00 2.23
3325 10454 9.917129 TTTATATCGGTTGCGAAATATTCTCTA 57.083 29.630 0.00 0.00 0.00 2.43
3326 10455 8.709646 GTTTATATCGGTTGCGAAATATTCTCT 58.290 33.333 0.00 0.00 0.00 3.10
3327 10456 8.492748 TGTTTATATCGGTTGCGAAATATTCTC 58.507 33.333 0.00 0.00 0.00 2.87
3328 10457 8.373048 TGTTTATATCGGTTGCGAAATATTCT 57.627 30.769 0.00 0.00 0.00 2.40
3329 10458 7.744715 CCTGTTTATATCGGTTGCGAAATATTC 59.255 37.037 0.00 0.00 0.00 1.75
3330 10459 7.227910 ACCTGTTTATATCGGTTGCGAAATATT 59.772 33.333 0.00 0.00 0.00 1.28
3331 10460 6.708949 ACCTGTTTATATCGGTTGCGAAATAT 59.291 34.615 0.00 0.00 0.00 1.28
3332 10461 6.018588 CACCTGTTTATATCGGTTGCGAAATA 60.019 38.462 0.00 0.00 0.00 1.40
3333 10462 4.879545 ACCTGTTTATATCGGTTGCGAAAT 59.120 37.500 0.00 0.00 0.00 2.17
3334 10463 4.093703 CACCTGTTTATATCGGTTGCGAAA 59.906 41.667 0.00 0.00 0.00 3.46
3335 10464 3.619483 CACCTGTTTATATCGGTTGCGAA 59.381 43.478 0.00 0.00 0.00 4.70
3336 10465 3.191669 CACCTGTTTATATCGGTTGCGA 58.808 45.455 0.00 0.00 0.00 5.10
3337 10466 2.286833 CCACCTGTTTATATCGGTTGCG 59.713 50.000 0.00 0.00 0.00 4.85
3338 10467 2.032924 GCCACCTGTTTATATCGGTTGC 59.967 50.000 0.00 0.00 32.18 4.17
3339 10468 2.616842 GGCCACCTGTTTATATCGGTTG 59.383 50.000 0.00 0.00 0.00 3.77
3340 10469 2.508300 AGGCCACCTGTTTATATCGGTT 59.492 45.455 5.01 0.00 29.57 4.44
3341 10470 2.104281 GAGGCCACCTGTTTATATCGGT 59.896 50.000 5.01 0.00 31.76 4.69
3342 10471 2.104111 TGAGGCCACCTGTTTATATCGG 59.896 50.000 5.01 0.00 31.76 4.18
3343 10472 3.469008 TGAGGCCACCTGTTTATATCG 57.531 47.619 5.01 0.00 31.76 2.92
3344 10473 5.133221 ACAATGAGGCCACCTGTTTATATC 58.867 41.667 5.01 0.00 31.76 1.63
3345 10474 5.129368 ACAATGAGGCCACCTGTTTATAT 57.871 39.130 5.01 0.00 31.76 0.86
3346 10475 4.584638 ACAATGAGGCCACCTGTTTATA 57.415 40.909 5.01 0.00 31.76 0.98
3347 10476 3.456380 ACAATGAGGCCACCTGTTTAT 57.544 42.857 5.01 0.00 31.76 1.40
3348 10477 2.969821 ACAATGAGGCCACCTGTTTA 57.030 45.000 5.01 0.00 31.76 2.01
3349 10478 1.963515 GAACAATGAGGCCACCTGTTT 59.036 47.619 15.62 0.00 33.99 2.83
3350 10479 1.620822 GAACAATGAGGCCACCTGTT 58.379 50.000 14.78 14.78 35.55 3.16
3351 10480 0.251341 GGAACAATGAGGCCACCTGT 60.251 55.000 5.01 1.89 31.76 4.00
3352 10481 0.251297 TGGAACAATGAGGCCACCTG 60.251 55.000 5.01 1.15 29.21 4.00
3353 10482 2.163454 TGGAACAATGAGGCCACCT 58.837 52.632 5.01 0.00 31.82 4.00
3354 10483 4.841441 TGGAACAATGAGGCCACC 57.159 55.556 5.01 0.00 31.92 4.61
3365 10494 6.892658 AGTTAGTGCAAATACATTGGAACA 57.107 33.333 0.00 0.00 41.36 3.18
3366 10495 8.040716 ACTAGTTAGTGCAAATACATTGGAAC 57.959 34.615 0.00 0.00 41.36 3.62
3367 10496 9.727859 TTACTAGTTAGTGCAAATACATTGGAA 57.272 29.630 0.00 0.00 41.36 3.53
3368 10497 9.727859 TTTACTAGTTAGTGCAAATACATTGGA 57.272 29.630 0.00 0.00 37.34 3.53
3399 10528 9.418045 CCCAAAATAAGTGTCGTGATTTTAATT 57.582 29.630 0.00 0.00 31.86 1.40
3400 10529 8.798402 TCCCAAAATAAGTGTCGTGATTTTAAT 58.202 29.630 0.00 0.00 31.86 1.40
3401 10530 8.167605 TCCCAAAATAAGTGTCGTGATTTTAA 57.832 30.769 0.00 0.00 31.86 1.52
3402 10531 7.747155 TCCCAAAATAAGTGTCGTGATTTTA 57.253 32.000 0.00 0.00 31.86 1.52
3403 10532 6.642707 TCCCAAAATAAGTGTCGTGATTTT 57.357 33.333 0.00 0.00 32.97 1.82
3404 10533 6.432783 TCATCCCAAAATAAGTGTCGTGATTT 59.567 34.615 0.00 0.00 0.00 2.17
3405 10534 5.943416 TCATCCCAAAATAAGTGTCGTGATT 59.057 36.000 0.00 0.00 0.00 2.57
3406 10535 5.496556 TCATCCCAAAATAAGTGTCGTGAT 58.503 37.500 0.00 0.00 0.00 3.06
3407 10536 4.900684 TCATCCCAAAATAAGTGTCGTGA 58.099 39.130 0.00 0.00 0.00 4.35
3408 10537 5.391950 CCTTCATCCCAAAATAAGTGTCGTG 60.392 44.000 0.00 0.00 0.00 4.35
3409 10538 4.700213 CCTTCATCCCAAAATAAGTGTCGT 59.300 41.667 0.00 0.00 0.00 4.34
3410 10539 4.096382 CCCTTCATCCCAAAATAAGTGTCG 59.904 45.833 0.00 0.00 0.00 4.35
3411 10540 5.261216 TCCCTTCATCCCAAAATAAGTGTC 58.739 41.667 0.00 0.00 0.00 3.67
3412 10541 5.222337 ACTCCCTTCATCCCAAAATAAGTGT 60.222 40.000 0.00 0.00 0.00 3.55
3413 10542 5.264395 ACTCCCTTCATCCCAAAATAAGTG 58.736 41.667 0.00 0.00 0.00 3.16
3414 10543 5.536497 ACTCCCTTCATCCCAAAATAAGT 57.464 39.130 0.00 0.00 0.00 2.24
3415 10544 5.532779 GCTACTCCCTTCATCCCAAAATAAG 59.467 44.000 0.00 0.00 0.00 1.73
3416 10545 5.445964 GCTACTCCCTTCATCCCAAAATAA 58.554 41.667 0.00 0.00 0.00 1.40
3417 10546 4.444306 CGCTACTCCCTTCATCCCAAAATA 60.444 45.833 0.00 0.00 0.00 1.40
3418 10547 3.685550 CGCTACTCCCTTCATCCCAAAAT 60.686 47.826 0.00 0.00 0.00 1.82
3419 10548 2.355716 CGCTACTCCCTTCATCCCAAAA 60.356 50.000 0.00 0.00 0.00 2.44
3420 10549 1.209504 CGCTACTCCCTTCATCCCAAA 59.790 52.381 0.00 0.00 0.00 3.28
3421 10550 0.830648 CGCTACTCCCTTCATCCCAA 59.169 55.000 0.00 0.00 0.00 4.12
3422 10551 0.032515 TCGCTACTCCCTTCATCCCA 60.033 55.000 0.00 0.00 0.00 4.37
3423 10552 1.120530 TTCGCTACTCCCTTCATCCC 58.879 55.000 0.00 0.00 0.00 3.85
3424 10553 2.981859 TTTCGCTACTCCCTTCATCC 57.018 50.000 0.00 0.00 0.00 3.51
3425 10554 6.311690 GCTATAATTTCGCTACTCCCTTCATC 59.688 42.308 0.00 0.00 0.00 2.92
3426 10555 6.166982 GCTATAATTTCGCTACTCCCTTCAT 58.833 40.000 0.00 0.00 0.00 2.57
3427 10556 5.069914 TGCTATAATTTCGCTACTCCCTTCA 59.930 40.000 0.00 0.00 0.00 3.02
3428 10557 5.539048 TGCTATAATTTCGCTACTCCCTTC 58.461 41.667 0.00 0.00 0.00 3.46
3429 10558 5.546621 TGCTATAATTTCGCTACTCCCTT 57.453 39.130 0.00 0.00 0.00 3.95
3430 10559 5.746990 ATGCTATAATTTCGCTACTCCCT 57.253 39.130 0.00 0.00 0.00 4.20
3431 10560 5.390991 GCAATGCTATAATTTCGCTACTCCC 60.391 44.000 0.00 0.00 0.00 4.30
3432 10561 5.179368 TGCAATGCTATAATTTCGCTACTCC 59.821 40.000 6.82 0.00 0.00 3.85
3433 10562 6.228273 TGCAATGCTATAATTTCGCTACTC 57.772 37.500 6.82 0.00 0.00 2.59
3434 10563 6.618287 TTGCAATGCTATAATTTCGCTACT 57.382 33.333 6.82 0.00 0.00 2.57
3435 10564 6.857964 ACATTGCAATGCTATAATTTCGCTAC 59.142 34.615 33.94 0.00 40.04 3.58
3436 10565 6.969366 ACATTGCAATGCTATAATTTCGCTA 58.031 32.000 33.94 0.00 40.04 4.26
3437 10566 5.835257 ACATTGCAATGCTATAATTTCGCT 58.165 33.333 33.94 11.31 40.04 4.93
3438 10567 6.198778 TGAACATTGCAATGCTATAATTTCGC 59.801 34.615 33.94 11.37 40.04 4.70
3439 10568 7.682593 TGAACATTGCAATGCTATAATTTCG 57.317 32.000 33.94 10.83 40.04 3.46
3445 10574 9.478768 CCAAAATATGAACATTGCAATGCTATA 57.521 29.630 33.94 27.17 40.04 1.31
3446 10575 7.442969 CCCAAAATATGAACATTGCAATGCTAT 59.557 33.333 33.94 26.18 40.04 2.97
3447 10576 6.762187 CCCAAAATATGAACATTGCAATGCTA 59.238 34.615 33.94 22.21 40.04 3.49
3448 10577 5.587043 CCCAAAATATGAACATTGCAATGCT 59.413 36.000 33.94 25.29 40.04 3.79
3449 10578 5.585445 TCCCAAAATATGAACATTGCAATGC 59.415 36.000 33.94 21.39 40.04 3.56
3450 10579 6.237888 CGTCCCAAAATATGAACATTGCAATG 60.238 38.462 32.74 32.74 42.10 2.82
3451 10580 5.811613 CGTCCCAAAATATGAACATTGCAAT 59.188 36.000 5.99 5.99 0.00 3.56
3452 10581 5.167121 CGTCCCAAAATATGAACATTGCAA 58.833 37.500 0.00 0.00 0.00 4.08
3453 10582 4.381398 CCGTCCCAAAATATGAACATTGCA 60.381 41.667 0.00 0.00 0.00 4.08
3454 10583 4.111916 CCGTCCCAAAATATGAACATTGC 58.888 43.478 0.00 0.00 0.00 3.56
3455 10584 5.574891 TCCGTCCCAAAATATGAACATTG 57.425 39.130 0.00 0.00 0.00 2.82
3456 10585 6.350949 CCTTTCCGTCCCAAAATATGAACATT 60.351 38.462 0.00 0.00 0.00 2.71
3457 10586 5.127031 CCTTTCCGTCCCAAAATATGAACAT 59.873 40.000 0.00 0.00 0.00 2.71
3458 10587 4.461081 CCTTTCCGTCCCAAAATATGAACA 59.539 41.667 0.00 0.00 0.00 3.18
3459 10588 4.703093 TCCTTTCCGTCCCAAAATATGAAC 59.297 41.667 0.00 0.00 0.00 3.18
3460 10589 4.924625 TCCTTTCCGTCCCAAAATATGAA 58.075 39.130 0.00 0.00 0.00 2.57
3461 10590 4.577988 TCCTTTCCGTCCCAAAATATGA 57.422 40.909 0.00 0.00 0.00 2.15
3462 10591 5.394115 CCTTTCCTTTCCGTCCCAAAATATG 60.394 44.000 0.00 0.00 0.00 1.78
3463 10592 4.709886 CCTTTCCTTTCCGTCCCAAAATAT 59.290 41.667 0.00 0.00 0.00 1.28
3464 10593 4.083565 CCTTTCCTTTCCGTCCCAAAATA 58.916 43.478 0.00 0.00 0.00 1.40
3465 10594 2.897326 CCTTTCCTTTCCGTCCCAAAAT 59.103 45.455 0.00 0.00 0.00 1.82
3466 10595 2.312390 CCTTTCCTTTCCGTCCCAAAA 58.688 47.619 0.00 0.00 0.00 2.44
3467 10596 1.479757 CCCTTTCCTTTCCGTCCCAAA 60.480 52.381 0.00 0.00 0.00 3.28
3468 10597 0.111639 CCCTTTCCTTTCCGTCCCAA 59.888 55.000 0.00 0.00 0.00 4.12
3469 10598 1.765074 CCCTTTCCTTTCCGTCCCA 59.235 57.895 0.00 0.00 0.00 4.37
3470 10599 1.001269 CCCCTTTCCTTTCCGTCCC 60.001 63.158 0.00 0.00 0.00 4.46
3471 10600 1.001269 CCCCCTTTCCTTTCCGTCC 60.001 63.158 0.00 0.00 0.00 4.79
3472 10601 0.986527 TACCCCCTTTCCTTTCCGTC 59.013 55.000 0.00 0.00 0.00 4.79
3473 10602 1.677490 ATACCCCCTTTCCTTTCCGT 58.323 50.000 0.00 0.00 0.00 4.69
3474 10603 4.263199 GGTATATACCCCCTTTCCTTTCCG 60.263 50.000 19.76 0.00 40.53 4.30
3475 10604 4.263199 CGGTATATACCCCCTTTCCTTTCC 60.263 50.000 23.49 0.00 43.51 3.13
3476 10605 4.349048 ACGGTATATACCCCCTTTCCTTTC 59.651 45.833 23.49 0.00 43.51 2.62
3477 10606 4.103627 CACGGTATATACCCCCTTTCCTTT 59.896 45.833 23.49 0.00 43.51 3.11
3478 10607 3.649502 CACGGTATATACCCCCTTTCCTT 59.350 47.826 23.49 0.00 43.51 3.36
3479 10608 3.245441 CACGGTATATACCCCCTTTCCT 58.755 50.000 23.49 0.00 43.51 3.36
3480 10609 2.974794 ACACGGTATATACCCCCTTTCC 59.025 50.000 23.49 0.00 43.51 3.13
3481 10610 3.642848 TGACACGGTATATACCCCCTTTC 59.357 47.826 23.49 13.97 43.51 2.62
3482 10611 3.389002 GTGACACGGTATATACCCCCTTT 59.611 47.826 23.49 6.17 43.51 3.11
3483 10612 2.967887 GTGACACGGTATATACCCCCTT 59.032 50.000 23.49 7.81 43.51 3.95
3484 10613 2.601905 GTGACACGGTATATACCCCCT 58.398 52.381 23.49 7.78 43.51 4.79
3485 10614 1.270550 CGTGACACGGTATATACCCCC 59.729 57.143 23.49 11.88 43.51 5.40
3486 10615 1.336240 GCGTGACACGGTATATACCCC 60.336 57.143 27.86 12.18 43.51 4.95
3487 10616 1.336240 GGCGTGACACGGTATATACCC 60.336 57.143 27.86 14.55 43.51 3.69
3488 10617 1.610522 AGGCGTGACACGGTATATACC 59.389 52.381 27.86 20.39 42.82 2.73
3489 10618 3.360249 AAGGCGTGACACGGTATATAC 57.640 47.619 27.86 10.19 42.82 1.47
3490 10619 4.136796 ACTAAGGCGTGACACGGTATATA 58.863 43.478 27.86 3.30 42.82 0.86
3491 10620 2.954318 ACTAAGGCGTGACACGGTATAT 59.046 45.455 27.86 0.00 42.82 0.86
3492 10621 2.368439 ACTAAGGCGTGACACGGTATA 58.632 47.619 27.86 5.00 42.82 1.47
3493 10622 1.180029 ACTAAGGCGTGACACGGTAT 58.820 50.000 27.86 4.21 42.82 2.73
3494 10623 0.961019 AACTAAGGCGTGACACGGTA 59.039 50.000 27.86 0.00 42.82 4.02
3495 10624 0.319297 GAACTAAGGCGTGACACGGT 60.319 55.000 27.86 14.63 42.82 4.83
3496 10625 0.319211 TGAACTAAGGCGTGACACGG 60.319 55.000 27.86 13.99 42.82 4.94
3497 10626 1.654105 GATGAACTAAGGCGTGACACG 59.346 52.381 23.43 23.43 45.88 4.49
3498 10627 2.000447 GGATGAACTAAGGCGTGACAC 59.000 52.381 0.00 0.00 0.00 3.67
3499 10628 1.066430 GGGATGAACTAAGGCGTGACA 60.066 52.381 0.00 0.00 0.00 3.58
3500 10629 1.207329 AGGGATGAACTAAGGCGTGAC 59.793 52.381 0.00 0.00 0.00 3.67
3501 10630 1.207089 CAGGGATGAACTAAGGCGTGA 59.793 52.381 0.00 0.00 0.00 4.35
3502 10631 1.066143 ACAGGGATGAACTAAGGCGTG 60.066 52.381 0.00 0.00 0.00 5.34
3503 10632 1.066143 CACAGGGATGAACTAAGGCGT 60.066 52.381 0.00 0.00 0.00 5.68
3504 10633 1.656652 CACAGGGATGAACTAAGGCG 58.343 55.000 0.00 0.00 0.00 5.52
3505 10634 2.019156 GCCACAGGGATGAACTAAGGC 61.019 57.143 0.00 0.00 35.59 4.35
3506 10635 1.743772 CGCCACAGGGATGAACTAAGG 60.744 57.143 0.00 0.00 35.59 2.69
3507 10636 1.656652 CGCCACAGGGATGAACTAAG 58.343 55.000 0.00 0.00 35.59 2.18
3508 10637 0.251916 CCGCCACAGGGATGAACTAA 59.748 55.000 0.00 0.00 35.59 2.24
3509 10638 0.616395 TCCGCCACAGGGATGAACTA 60.616 55.000 0.00 0.00 35.59 2.24
3510 10639 1.918293 TCCGCCACAGGGATGAACT 60.918 57.895 0.00 0.00 35.59 3.01
3511 10640 1.745489 GTCCGCCACAGGGATGAAC 60.745 63.158 0.00 0.00 35.67 3.18
3512 10641 2.668632 GTCCGCCACAGGGATGAA 59.331 61.111 0.00 0.00 35.67 2.57
3513 10642 2.523740 TAGGTCCGCCACAGGGATGA 62.524 60.000 0.00 0.00 35.67 2.92
3514 10643 2.032860 CTAGGTCCGCCACAGGGATG 62.033 65.000 0.00 0.00 35.67 3.51
3515 10644 1.762460 CTAGGTCCGCCACAGGGAT 60.762 63.158 0.00 0.00 35.67 3.85
3516 10645 2.363795 CTAGGTCCGCCACAGGGA 60.364 66.667 0.00 0.00 37.19 4.20
3517 10646 1.550130 TTTCTAGGTCCGCCACAGGG 61.550 60.000 0.00 0.00 37.19 4.45
3518 10647 0.541863 ATTTCTAGGTCCGCCACAGG 59.458 55.000 0.00 0.00 37.19 4.00
3519 10648 3.536956 TTATTTCTAGGTCCGCCACAG 57.463 47.619 0.00 0.00 37.19 3.66
3520 10649 3.985019 TTTATTTCTAGGTCCGCCACA 57.015 42.857 0.00 0.00 37.19 4.17
3521 10650 4.879545 TCATTTTATTTCTAGGTCCGCCAC 59.120 41.667 0.00 0.00 37.19 5.01
3522 10651 5.104693 TCTCATTTTATTTCTAGGTCCGCCA 60.105 40.000 0.00 0.00 37.19 5.69
3523 10652 5.365619 TCTCATTTTATTTCTAGGTCCGCC 58.634 41.667 0.00 0.00 0.00 6.13
3524 10653 6.018669 CACTCTCATTTTATTTCTAGGTCCGC 60.019 42.308 0.00 0.00 0.00 5.54
3525 10654 7.010552 CACACTCTCATTTTATTTCTAGGTCCG 59.989 40.741 0.00 0.00 0.00 4.79
3526 10655 7.201652 GCACACTCTCATTTTATTTCTAGGTCC 60.202 40.741 0.00 0.00 0.00 4.46
3527 10656 7.334421 TGCACACTCTCATTTTATTTCTAGGTC 59.666 37.037 0.00 0.00 0.00 3.85
3528 10657 7.119846 GTGCACACTCTCATTTTATTTCTAGGT 59.880 37.037 13.17 0.00 0.00 3.08
3529 10658 7.119699 TGTGCACACTCTCATTTTATTTCTAGG 59.880 37.037 17.42 0.00 0.00 3.02
3530 10659 7.959651 GTGTGCACACTCTCATTTTATTTCTAG 59.040 37.037 36.77 0.00 43.25 2.43
3531 10660 7.806690 GTGTGCACACTCTCATTTTATTTCTA 58.193 34.615 36.77 0.00 43.25 2.10
3532 10661 6.672147 GTGTGCACACTCTCATTTTATTTCT 58.328 36.000 36.77 0.00 43.25 2.52
3533 10662 6.918043 GTGTGCACACTCTCATTTTATTTC 57.082 37.500 36.77 9.72 43.25 2.17
3547 10676 9.124807 GACCTTATTATTTTAAAGTGTGCACAC 57.875 33.333 37.13 37.13 46.77 3.82
3548 10677 9.073475 AGACCTTATTATTTTAAAGTGTGCACA 57.927 29.630 17.42 17.42 0.00 4.57
3565 10694 9.487442 TCCAAGCCAATTAAAATAGACCTTATT 57.513 29.630 0.00 0.00 0.00 1.40
3566 10695 8.914011 GTCCAAGCCAATTAAAATAGACCTTAT 58.086 33.333 0.00 0.00 0.00 1.73
3567 10696 7.340999 GGTCCAAGCCAATTAAAATAGACCTTA 59.659 37.037 0.00 0.00 37.63 2.69
3568 10697 6.154534 GGTCCAAGCCAATTAAAATAGACCTT 59.845 38.462 0.00 0.00 37.63 3.50
3569 10698 5.656859 GGTCCAAGCCAATTAAAATAGACCT 59.343 40.000 0.00 0.00 37.63 3.85
3570 10699 5.420739 TGGTCCAAGCCAATTAAAATAGACC 59.579 40.000 0.00 0.00 40.35 3.85
3571 10700 6.524101 TGGTCCAAGCCAATTAAAATAGAC 57.476 37.500 0.00 0.00 35.25 2.59
3572 10701 5.127031 GCTGGTCCAAGCCAATTAAAATAGA 59.873 40.000 0.00 0.00 38.18 1.98
3573 10702 5.351458 GCTGGTCCAAGCCAATTAAAATAG 58.649 41.667 0.00 0.00 38.18 1.73
3574 10703 5.337578 GCTGGTCCAAGCCAATTAAAATA 57.662 39.130 0.00 0.00 38.18 1.40
3575 10704 4.206477 GCTGGTCCAAGCCAATTAAAAT 57.794 40.909 0.00 0.00 38.18 1.82
3576 10705 3.676291 GCTGGTCCAAGCCAATTAAAA 57.324 42.857 0.00 0.00 38.18 1.52
3585 10714 3.258123 TGATTTTTAAGGCTGGTCCAAGC 59.742 43.478 0.00 0.00 42.75 4.01
3586 10715 4.619160 GCTGATTTTTAAGGCTGGTCCAAG 60.619 45.833 0.00 0.00 37.29 3.61
3587 10716 3.258123 GCTGATTTTTAAGGCTGGTCCAA 59.742 43.478 0.00 0.00 37.29 3.53
3588 10717 2.825532 GCTGATTTTTAAGGCTGGTCCA 59.174 45.455 0.00 0.00 37.29 4.02
3589 10718 3.092301 AGCTGATTTTTAAGGCTGGTCC 58.908 45.455 0.00 0.00 31.68 4.46
3590 10719 6.456795 AATAGCTGATTTTTAAGGCTGGTC 57.543 37.500 0.00 0.00 34.88 4.02
3591 10720 6.857437 AAATAGCTGATTTTTAAGGCTGGT 57.143 33.333 0.00 0.00 33.77 4.00
3632 10761 4.195416 GCACACCCAGAATTTTGGAAAAA 58.805 39.130 16.44 0.00 40.87 1.94
3633 10762 3.432890 GGCACACCCAGAATTTTGGAAAA 60.433 43.478 16.44 0.00 40.87 2.29
3634 10763 2.103941 GGCACACCCAGAATTTTGGAAA 59.896 45.455 16.44 0.00 40.87 3.13
3635 10764 1.691434 GGCACACCCAGAATTTTGGAA 59.309 47.619 16.44 0.00 40.87 3.53
3636 10765 1.337118 GGCACACCCAGAATTTTGGA 58.663 50.000 16.44 0.00 40.87 3.53
3637 10766 1.047002 TGGCACACCCAGAATTTTGG 58.953 50.000 8.06 8.06 39.18 3.28
3653 10782 4.794648 TAGCGGGTGTGCCATGGC 62.795 66.667 30.54 30.54 42.35 4.40
3654 10783 2.514592 CTAGCGGGTGTGCCATGG 60.515 66.667 7.63 7.63 36.17 3.66
3655 10784 2.514592 CCTAGCGGGTGTGCCATG 60.515 66.667 0.00 0.00 36.17 3.66
3664 10793 1.515954 CAGTGGTGTACCTAGCGGG 59.484 63.158 2.32 0.00 41.89 6.13
3665 10794 1.255667 ACCAGTGGTGTACCTAGCGG 61.256 60.000 15.86 0.98 32.98 5.52
3666 10795 0.606604 AACCAGTGGTGTACCTAGCG 59.393 55.000 17.56 0.00 35.34 4.26
3667 10796 1.621814 TGAACCAGTGGTGTACCTAGC 59.378 52.381 17.56 0.00 35.34 3.42
3668 10797 2.028385 GGTGAACCAGTGGTGTACCTAG 60.028 54.545 28.54 0.00 38.58 3.02
3669 10798 1.972795 GGTGAACCAGTGGTGTACCTA 59.027 52.381 28.54 8.15 38.58 3.08
3670 10799 0.763035 GGTGAACCAGTGGTGTACCT 59.237 55.000 28.54 11.29 38.58 3.08
3671 10800 0.250597 GGGTGAACCAGTGGTGTACC 60.251 60.000 28.19 28.19 39.94 3.34
3672 10801 0.763035 AGGGTGAACCAGTGGTGTAC 59.237 55.000 17.56 17.18 43.89 2.90
3673 10802 2.402182 TAGGGTGAACCAGTGGTGTA 57.598 50.000 17.56 4.98 43.89 2.90
3674 10803 1.742308 ATAGGGTGAACCAGTGGTGT 58.258 50.000 17.56 6.11 43.89 4.16
3675 10804 2.569853 TGTATAGGGTGAACCAGTGGTG 59.430 50.000 17.56 0.00 43.89 4.17
3676 10805 2.910544 TGTATAGGGTGAACCAGTGGT 58.089 47.619 9.70 9.70 43.89 4.16
3677 10806 3.433598 CCATGTATAGGGTGAACCAGTGG 60.434 52.174 7.91 7.91 43.89 4.00
3678 10807 3.199946 ACCATGTATAGGGTGAACCAGTG 59.800 47.826 0.00 0.00 40.01 3.66
3679 10808 3.460825 ACCATGTATAGGGTGAACCAGT 58.539 45.455 0.00 0.00 40.01 4.00
3680 10809 4.503714 AACCATGTATAGGGTGAACCAG 57.496 45.455 0.00 0.00 40.79 4.00
3681 10810 4.324719 GGAAACCATGTATAGGGTGAACCA 60.325 45.833 0.00 0.00 40.79 3.67
3682 10811 4.204799 GGAAACCATGTATAGGGTGAACC 58.795 47.826 0.00 0.00 40.79 3.62
3683 10812 3.875134 CGGAAACCATGTATAGGGTGAAC 59.125 47.826 0.00 0.00 40.79 3.18
3684 10813 4.145365 CGGAAACCATGTATAGGGTGAA 57.855 45.455 0.00 0.00 40.79 3.18
3685 10814 3.830744 CGGAAACCATGTATAGGGTGA 57.169 47.619 0.00 0.00 40.79 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.