Multiple sequence alignment - TraesCS5D01G389600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G389600 chr5D 100.000 3423 0 0 1 3423 458775941 458779363 0.000000e+00 6322.0
1 TraesCS5D01G389600 chr5D 90.278 72 5 2 2884 2954 337222863 337222793 3.640000e-15 93.5
2 TraesCS5D01G389600 chr5D 94.000 50 3 0 402 451 458776197 458776246 3.660000e-10 76.8
3 TraesCS5D01G389600 chr6B 84.259 1080 106 30 1033 2068 542223775 542224834 0.000000e+00 994.0
4 TraesCS5D01G389600 chr6B 81.349 504 48 25 2094 2578 542224897 542225373 5.400000e-98 368.0
5 TraesCS5D01G389600 chr6B 91.589 107 7 2 222 328 129560836 129560940 2.750000e-31 147.0
6 TraesCS5D01G389600 chr6B 93.333 45 2 1 932 976 542223564 542223607 7.930000e-07 65.8
7 TraesCS5D01G389600 chr6D 97.020 537 7 3 2895 3422 143406974 143407510 0.000000e+00 894.0
8 TraesCS5D01G389600 chr6D 96.642 536 9 3 2895 3421 445520541 445521076 0.000000e+00 881.0
9 TraesCS5D01G389600 chr6D 86.139 808 69 19 1299 2070 360681279 360682079 0.000000e+00 832.0
10 TraesCS5D01G389600 chr6D 82.779 511 50 20 2085 2578 360682147 360682636 4.080000e-114 422.0
11 TraesCS5D01G389600 chr6D 84.038 213 27 6 2688 2894 360682770 360682981 7.490000e-47 198.0
12 TraesCS5D01G389600 chr6D 88.182 110 13 0 3294 3403 436232566 436232457 7.710000e-27 132.0
13 TraesCS5D01G389600 chr6D 93.333 45 2 1 932 976 360680799 360680842 7.930000e-07 65.8
14 TraesCS5D01G389600 chr2D 96.507 544 9 4 2888 3422 136526787 136527329 0.000000e+00 891.0
15 TraesCS5D01G389600 chr2D 94.227 537 11 4 2895 3422 577998973 577999498 0.000000e+00 802.0
16 TraesCS5D01G389600 chr2D 95.343 408 8 5 2891 3289 546445507 546445912 3.730000e-179 638.0
17 TraesCS5D01G389600 chr4D 96.654 538 9 3 2894 3422 204711714 204711177 0.000000e+00 885.0
18 TraesCS5D01G389600 chr4D 98.450 129 2 0 3294 3422 309627585 309627457 9.560000e-56 228.0
19 TraesCS5D01G389600 chr5B 93.419 547 26 9 2349 2894 562456252 562456789 0.000000e+00 802.0
20 TraesCS5D01G389600 chr5B 88.456 641 47 13 540 1156 562451966 562452603 0.000000e+00 749.0
21 TraesCS5D01G389600 chr5B 92.243 477 12 7 1286 1737 562452600 562453076 0.000000e+00 652.0
22 TraesCS5D01G389600 chr5B 92.326 417 21 7 1843 2254 562454282 562454692 1.770000e-162 582.0
23 TraesCS5D01G389600 chr5B 91.398 93 8 0 2260 2352 562455904 562455996 9.970000e-26 128.0
24 TraesCS5D01G389600 chr5B 98.413 63 1 0 1754 1816 562453069 562453131 1.000000e-20 111.0
25 TraesCS5D01G389600 chr5B 98.000 50 1 0 402 451 443647185 443647234 1.690000e-13 87.9
26 TraesCS5D01G389600 chr5B 94.000 50 3 0 402 451 392800777 392800826 3.660000e-10 76.8
27 TraesCS5D01G389600 chr5B 97.222 36 1 0 515 550 562451702 562451737 1.030000e-05 62.1
28 TraesCS5D01G389600 chr6A 85.268 801 72 22 1298 2063 501792224 501793013 0.000000e+00 784.0
29 TraesCS5D01G389600 chr6A 81.854 507 50 24 2094 2578 501793104 501793590 4.140000e-104 388.0
30 TraesCS5D01G389600 chr6A 85.526 228 25 8 2673 2894 501793730 501793955 7.390000e-57 231.0
31 TraesCS5D01G389600 chr6A 91.509 106 9 0 220 325 127574473 127574578 2.750000e-31 147.0
32 TraesCS5D01G389600 chr6A 80.606 165 21 8 55 216 79121964 79122120 2.160000e-22 117.0
33 TraesCS5D01G389600 chr1D 95.262 401 9 4 2898 3289 408742978 408742579 8.060000e-176 627.0
34 TraesCS5D01G389600 chr1D 88.182 110 13 0 3294 3403 350662977 350662868 7.710000e-27 132.0
35 TraesCS5D01G389600 chr1D 91.071 56 5 0 402 457 493531658 493531603 3.660000e-10 76.8
36 TraesCS5D01G389600 chr7D 99.225 129 1 0 3294 3422 479708324 479708452 2.050000e-57 233.0
37 TraesCS5D01G389600 chr7D 88.136 118 13 1 211 328 283442024 283442140 4.610000e-29 139.0
38 TraesCS5D01G389600 chr3D 78.618 304 48 7 2991 3289 28267170 28267461 5.830000e-43 185.0
39 TraesCS5D01G389600 chr3D 78.289 304 49 7 2991 3289 28249986 28250277 2.710000e-41 180.0
40 TraesCS5D01G389600 chr3D 92.424 66 5 0 2885 2950 488878554 488878489 1.010000e-15 95.3
41 TraesCS5D01G389600 chr3B 92.593 108 7 1 221 328 173280030 173279924 1.640000e-33 154.0
42 TraesCS5D01G389600 chr2B 91.892 111 8 1 218 328 443848098 443848207 1.640000e-33 154.0
43 TraesCS5D01G389600 chr2B 96.000 50 2 0 402 451 443848137 443848186 7.870000e-12 82.4
44 TraesCS5D01G389600 chr7B 91.743 109 9 0 217 325 517136915 517136807 5.920000e-33 152.0
45 TraesCS5D01G389600 chr7B 79.191 173 27 8 29 196 451151774 451151606 1.000000e-20 111.0
46 TraesCS5D01G389600 chr7B 97.959 49 1 0 403 451 232429741 232429789 6.090000e-13 86.1
47 TraesCS5D01G389600 chr7A 91.150 113 9 1 216 328 496100438 496100549 5.920000e-33 152.0
48 TraesCS5D01G389600 chr7A 89.565 115 11 1 210 324 35161321 35161434 9.900000e-31 145.0
49 TraesCS5D01G389600 chr7A 96.000 50 2 0 402 451 35161367 35161416 7.870000e-12 82.4
50 TraesCS5D01G389600 chr7A 96.000 50 2 0 402 451 496100479 496100528 7.870000e-12 82.4
51 TraesCS5D01G389600 chr2A 91.667 108 8 1 221 328 14514379 14514273 7.650000e-32 148.0
52 TraesCS5D01G389600 chr2A 92.857 56 4 0 402 457 14514343 14514288 7.870000e-12 82.4
53 TraesCS5D01G389600 chrUn 88.889 99 10 1 3057 3154 94992068 94992166 1.670000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G389600 chr5D 458775941 458779363 3422 False 3199.400000 6322 97.000000 1 3423 2 chr5D.!!$F1 3422
1 TraesCS5D01G389600 chr6B 542223564 542225373 1809 False 475.933333 994 86.313667 932 2578 3 chr6B.!!$F2 1646
2 TraesCS5D01G389600 chr6D 143406974 143407510 536 False 894.000000 894 97.020000 2895 3422 1 chr6D.!!$F1 527
3 TraesCS5D01G389600 chr6D 445520541 445521076 535 False 881.000000 881 96.642000 2895 3421 1 chr6D.!!$F2 526
4 TraesCS5D01G389600 chr6D 360680799 360682981 2182 False 379.450000 832 86.572250 932 2894 4 chr6D.!!$F3 1962
5 TraesCS5D01G389600 chr2D 136526787 136527329 542 False 891.000000 891 96.507000 2888 3422 1 chr2D.!!$F1 534
6 TraesCS5D01G389600 chr2D 577998973 577999498 525 False 802.000000 802 94.227000 2895 3422 1 chr2D.!!$F3 527
7 TraesCS5D01G389600 chr4D 204711177 204711714 537 True 885.000000 885 96.654000 2894 3422 1 chr4D.!!$R1 528
8 TraesCS5D01G389600 chr5B 562451702 562456789 5087 False 440.871429 802 93.353857 515 2894 7 chr5B.!!$F3 2379
9 TraesCS5D01G389600 chr6A 501792224 501793955 1731 False 467.666667 784 84.216000 1298 2894 3 chr6A.!!$F3 1596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
552 553 0.032267 GAGATGGCCAGCGTAGGTAC 59.968 60.0 16.75 0.0 35.08 3.34 F
877 1132 0.108804 CAGTGCCACTACCACTACCG 60.109 60.0 0.00 0.0 41.34 4.02 F
1275 1640 0.174617 TCACGCTAACGGATCATGCA 59.825 50.0 0.00 0.0 46.04 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2257 4040 0.033366 TCAGTCTGCGCAGTTAAGCA 59.967 50.0 34.70 13.84 41.55 3.91 R
2264 4047 0.455633 GCCATTTTCAGTCTGCGCAG 60.456 55.0 31.53 31.53 0.00 5.18 R
2951 6287 0.174845 CCGTTTAGGCAGATCGGACA 59.825 55.0 0.26 0.00 43.22 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.277552 CCATCTCACGGGAGGCTA 57.722 61.111 16.20 0.00 41.69 3.93
18 19 1.742768 CCATCTCACGGGAGGCTAC 59.257 63.158 16.20 0.00 41.69 3.58
19 20 1.043116 CCATCTCACGGGAGGCTACA 61.043 60.000 16.20 0.00 41.69 2.74
20 21 0.103208 CATCTCACGGGAGGCTACAC 59.897 60.000 16.20 0.00 41.69 2.90
21 22 1.043673 ATCTCACGGGAGGCTACACC 61.044 60.000 16.20 0.00 41.69 4.16
22 23 2.682494 TCACGGGAGGCTACACCC 60.682 66.667 0.00 0.00 43.42 4.61
23 24 2.683933 CACGGGAGGCTACACCCT 60.684 66.667 8.04 0.00 44.55 4.34
24 25 2.122056 ACGGGAGGCTACACCCTT 59.878 61.111 8.04 0.00 44.55 3.95
25 26 2.291043 ACGGGAGGCTACACCCTTG 61.291 63.158 8.04 0.00 44.55 3.61
26 27 2.291043 CGGGAGGCTACACCCTTGT 61.291 63.158 8.04 0.00 44.55 3.16
27 28 1.838073 CGGGAGGCTACACCCTTGTT 61.838 60.000 8.04 0.00 44.55 2.83
28 29 0.404426 GGGAGGCTACACCCTTGTTT 59.596 55.000 0.00 0.00 43.51 2.83
29 30 1.203013 GGGAGGCTACACCCTTGTTTT 60.203 52.381 0.00 0.00 43.51 2.43
30 31 2.594131 GGAGGCTACACCCTTGTTTTT 58.406 47.619 0.00 0.00 40.58 1.94
31 32 2.296190 GGAGGCTACACCCTTGTTTTTG 59.704 50.000 0.00 0.00 40.58 2.44
32 33 2.956333 GAGGCTACACCCTTGTTTTTGT 59.044 45.455 0.00 0.00 40.58 2.83
33 34 3.371034 AGGCTACACCCTTGTTTTTGTT 58.629 40.909 0.00 0.00 40.58 2.83
34 35 3.772572 AGGCTACACCCTTGTTTTTGTTT 59.227 39.130 0.00 0.00 40.58 2.83
35 36 4.224147 AGGCTACACCCTTGTTTTTGTTTT 59.776 37.500 0.00 0.00 40.58 2.43
36 37 4.569162 GGCTACACCCTTGTTTTTGTTTTC 59.431 41.667 0.00 0.00 37.15 2.29
37 38 5.416083 GCTACACCCTTGTTTTTGTTTTCT 58.584 37.500 0.00 0.00 37.15 2.52
38 39 5.872617 GCTACACCCTTGTTTTTGTTTTCTT 59.127 36.000 0.00 0.00 37.15 2.52
39 40 6.370442 GCTACACCCTTGTTTTTGTTTTCTTT 59.630 34.615 0.00 0.00 37.15 2.52
40 41 7.094975 GCTACACCCTTGTTTTTGTTTTCTTTT 60.095 33.333 0.00 0.00 37.15 2.27
41 42 7.575414 ACACCCTTGTTTTTGTTTTCTTTTT 57.425 28.000 0.00 0.00 28.43 1.94
86 87 8.770010 TTTTTACTTCCAAATACTCCAAGGAA 57.230 30.769 0.00 0.00 36.92 3.36
87 88 8.770010 TTTTACTTCCAAATACTCCAAGGAAA 57.230 30.769 0.00 0.00 37.86 3.13
88 89 8.950007 TTTACTTCCAAATACTCCAAGGAAAT 57.050 30.769 0.00 0.00 37.86 2.17
123 124 9.905171 AAAAACACTTTGCATAAAAACATTTGT 57.095 22.222 0.00 0.00 0.00 2.83
183 184 9.685276 AAATGTGTATGGAGAATATGTTTCTCA 57.315 29.630 17.19 7.96 45.01 3.27
184 185 9.857656 AATGTGTATGGAGAATATGTTTCTCAT 57.142 29.630 17.19 12.45 45.01 2.90
185 186 8.667076 TGTGTATGGAGAATATGTTTCTCATG 57.333 34.615 17.19 0.00 45.01 3.07
186 187 8.267183 TGTGTATGGAGAATATGTTTCTCATGT 58.733 33.333 17.19 8.44 45.01 3.21
187 188 9.764363 GTGTATGGAGAATATGTTTCTCATGTA 57.236 33.333 17.19 7.77 45.01 2.29
234 235 7.481275 AAAAATGCATTGTTCAAGAATTCGT 57.519 28.000 13.82 0.00 0.00 3.85
235 236 6.695292 AAATGCATTGTTCAAGAATTCGTC 57.305 33.333 13.82 0.00 0.00 4.20
236 237 4.159377 TGCATTGTTCAAGAATTCGTCC 57.841 40.909 0.00 0.00 0.00 4.79
237 238 3.163594 GCATTGTTCAAGAATTCGTCCG 58.836 45.455 0.00 0.00 0.00 4.79
238 239 3.120338 GCATTGTTCAAGAATTCGTCCGA 60.120 43.478 0.00 0.00 0.00 4.55
239 240 4.437390 GCATTGTTCAAGAATTCGTCCGAT 60.437 41.667 0.00 0.00 0.00 4.18
240 241 5.631026 CATTGTTCAAGAATTCGTCCGATT 58.369 37.500 0.00 0.00 0.00 3.34
241 242 6.674519 GCATTGTTCAAGAATTCGTCCGATTA 60.675 38.462 0.00 0.00 0.00 1.75
242 243 6.788684 TTGTTCAAGAATTCGTCCGATTAA 57.211 33.333 0.00 0.00 0.00 1.40
243 244 6.978343 TGTTCAAGAATTCGTCCGATTAAT 57.022 33.333 0.00 0.00 0.00 1.40
244 245 7.372451 TGTTCAAGAATTCGTCCGATTAATT 57.628 32.000 0.00 0.00 0.00 1.40
245 246 8.481974 TGTTCAAGAATTCGTCCGATTAATTA 57.518 30.769 0.00 0.00 0.00 1.40
246 247 9.104965 TGTTCAAGAATTCGTCCGATTAATTAT 57.895 29.630 0.00 0.00 0.00 1.28
247 248 9.931210 GTTCAAGAATTCGTCCGATTAATTATT 57.069 29.630 0.00 0.00 0.00 1.40
253 254 9.853921 GAATTCGTCCGATTAATTATTTAACGT 57.146 29.630 0.00 0.00 30.33 3.99
254 255 9.640974 AATTCGTCCGATTAATTATTTAACGTG 57.359 29.630 0.00 0.00 30.33 4.49
255 256 6.639212 TCGTCCGATTAATTATTTAACGTGC 58.361 36.000 0.00 0.00 30.33 5.34
256 257 5.842327 CGTCCGATTAATTATTTAACGTGCC 59.158 40.000 0.00 0.00 30.33 5.01
257 258 6.509837 CGTCCGATTAATTATTTAACGTGCCA 60.510 38.462 0.00 0.00 30.33 4.92
258 259 6.849305 GTCCGATTAATTATTTAACGTGCCAG 59.151 38.462 0.00 0.00 30.33 4.85
259 260 6.539464 TCCGATTAATTATTTAACGTGCCAGT 59.461 34.615 0.00 0.00 30.33 4.00
260 261 7.066043 TCCGATTAATTATTTAACGTGCCAGTT 59.934 33.333 0.00 0.00 38.07 3.16
261 262 8.336806 CCGATTAATTATTTAACGTGCCAGTTA 58.663 33.333 0.00 0.00 35.70 2.24
262 263 9.705471 CGATTAATTATTTAACGTGCCAGTTAA 57.295 29.630 9.03 9.03 42.68 2.01
265 266 9.705471 TTAATTATTTAACGTGCCAGTTAATCG 57.295 29.630 12.58 0.00 43.47 3.34
266 267 3.458779 TTTAACGTGCCAGTTAATCGC 57.541 42.857 12.58 0.00 43.47 4.58
267 268 2.373540 TAACGTGCCAGTTAATCGCT 57.626 45.000 0.00 0.00 34.08 4.93
268 269 2.373540 AACGTGCCAGTTAATCGCTA 57.626 45.000 0.00 0.00 31.74 4.26
269 270 1.636988 ACGTGCCAGTTAATCGCTAC 58.363 50.000 0.00 0.00 0.00 3.58
270 271 1.203994 ACGTGCCAGTTAATCGCTACT 59.796 47.619 0.00 0.00 0.00 2.57
271 272 1.588404 CGTGCCAGTTAATCGCTACTG 59.412 52.381 0.00 0.00 41.08 2.74
277 278 4.650754 CAGTTAATCGCTACTGGTAGGT 57.349 45.455 9.43 0.00 38.44 3.08
278 279 5.007385 CAGTTAATCGCTACTGGTAGGTT 57.993 43.478 9.43 0.00 38.44 3.50
279 280 4.804139 CAGTTAATCGCTACTGGTAGGTTG 59.196 45.833 9.43 0.00 38.44 3.77
280 281 4.708421 AGTTAATCGCTACTGGTAGGTTGA 59.292 41.667 9.43 0.00 33.87 3.18
281 282 3.521947 AATCGCTACTGGTAGGTTGAC 57.478 47.619 9.43 0.00 33.87 3.18
282 283 1.180029 TCGCTACTGGTAGGTTGACC 58.820 55.000 9.43 0.00 40.21 4.02
283 284 0.179145 CGCTACTGGTAGGTTGACCG 60.179 60.000 9.43 0.71 42.99 4.79
284 285 1.180029 GCTACTGGTAGGTTGACCGA 58.820 55.000 9.43 0.00 42.99 4.69
285 286 1.547372 GCTACTGGTAGGTTGACCGAA 59.453 52.381 9.43 0.00 42.99 4.30
286 287 2.167900 GCTACTGGTAGGTTGACCGAAT 59.832 50.000 9.43 0.00 42.99 3.34
287 288 3.737355 GCTACTGGTAGGTTGACCGAATC 60.737 52.174 9.43 0.00 42.99 2.52
288 289 1.203994 ACTGGTAGGTTGACCGAATCG 59.796 52.381 0.00 0.00 42.99 3.34
289 290 1.475280 CTGGTAGGTTGACCGAATCGA 59.525 52.381 3.36 0.00 42.99 3.59
290 291 1.894466 TGGTAGGTTGACCGAATCGAA 59.106 47.619 3.36 0.00 42.99 3.71
291 292 2.498481 TGGTAGGTTGACCGAATCGAAT 59.502 45.455 3.36 0.00 42.99 3.34
292 293 3.700539 TGGTAGGTTGACCGAATCGAATA 59.299 43.478 3.36 0.00 42.99 1.75
293 294 4.160065 TGGTAGGTTGACCGAATCGAATAA 59.840 41.667 3.36 0.00 42.99 1.40
294 295 4.505556 GGTAGGTTGACCGAATCGAATAAC 59.494 45.833 3.36 5.83 42.08 1.89
295 296 4.196626 AGGTTGACCGAATCGAATAACA 57.803 40.909 3.36 0.00 42.08 2.41
296 297 3.930848 AGGTTGACCGAATCGAATAACAC 59.069 43.478 3.36 1.34 42.08 3.32
297 298 3.063045 GGTTGACCGAATCGAATAACACC 59.937 47.826 3.36 0.00 0.00 4.16
298 299 3.880047 TGACCGAATCGAATAACACCT 57.120 42.857 3.36 0.00 0.00 4.00
299 300 4.987408 TGACCGAATCGAATAACACCTA 57.013 40.909 3.36 0.00 0.00 3.08
300 301 5.524971 TGACCGAATCGAATAACACCTAT 57.475 39.130 3.36 0.00 0.00 2.57
301 302 5.909477 TGACCGAATCGAATAACACCTATT 58.091 37.500 3.36 0.00 32.60 1.73
302 303 5.981315 TGACCGAATCGAATAACACCTATTC 59.019 40.000 3.36 0.00 41.76 1.75
303 304 5.909477 ACCGAATCGAATAACACCTATTCA 58.091 37.500 3.36 0.00 44.32 2.57
304 305 6.522054 ACCGAATCGAATAACACCTATTCAT 58.478 36.000 3.36 0.00 44.32 2.57
305 306 6.645415 ACCGAATCGAATAACACCTATTCATC 59.355 38.462 3.36 0.95 44.32 2.92
306 307 6.183359 CCGAATCGAATAACACCTATTCATCG 60.183 42.308 3.36 12.56 44.32 3.84
307 308 6.362551 CGAATCGAATAACACCTATTCATCGT 59.637 38.462 0.00 0.00 44.32 3.73
308 309 7.408132 AATCGAATAACACCTATTCATCGTG 57.592 36.000 0.00 0.00 44.32 4.35
309 310 5.898174 TCGAATAACACCTATTCATCGTGT 58.102 37.500 5.59 0.00 44.32 4.49
316 317 6.721571 ACACCTATTCATCGTGTTAACTTG 57.278 37.500 7.22 0.00 37.45 3.16
317 318 6.228258 ACACCTATTCATCGTGTTAACTTGT 58.772 36.000 7.22 0.00 37.45 3.16
318 319 6.367969 ACACCTATTCATCGTGTTAACTTGTC 59.632 38.462 7.22 0.00 37.45 3.18
319 320 6.367695 CACCTATTCATCGTGTTAACTTGTCA 59.632 38.462 7.22 0.00 0.00 3.58
320 321 6.590292 ACCTATTCATCGTGTTAACTTGTCAG 59.410 38.462 7.22 0.00 0.00 3.51
321 322 5.862924 ATTCATCGTGTTAACTTGTCAGG 57.137 39.130 7.22 0.00 0.00 3.86
322 323 3.064207 TCATCGTGTTAACTTGTCAGGC 58.936 45.455 7.22 0.00 0.00 4.85
323 324 1.873698 TCGTGTTAACTTGTCAGGCC 58.126 50.000 7.22 0.00 0.00 5.19
324 325 1.139256 TCGTGTTAACTTGTCAGGCCA 59.861 47.619 5.01 0.00 0.00 5.36
325 326 1.531149 CGTGTTAACTTGTCAGGCCAG 59.469 52.381 5.01 0.00 0.00 4.85
326 327 2.805295 CGTGTTAACTTGTCAGGCCAGA 60.805 50.000 5.01 0.00 0.00 3.86
327 328 3.412386 GTGTTAACTTGTCAGGCCAGAT 58.588 45.455 5.01 0.00 0.00 2.90
328 329 3.437049 GTGTTAACTTGTCAGGCCAGATC 59.563 47.826 5.01 0.00 0.00 2.75
329 330 2.672961 TAACTTGTCAGGCCAGATCG 57.327 50.000 5.01 0.00 0.00 3.69
330 331 0.687354 AACTTGTCAGGCCAGATCGT 59.313 50.000 5.01 0.00 0.00 3.73
331 332 0.036952 ACTTGTCAGGCCAGATCGTG 60.037 55.000 5.01 0.00 0.00 4.35
332 333 0.036952 CTTGTCAGGCCAGATCGTGT 60.037 55.000 5.01 0.00 0.00 4.49
333 334 0.396435 TTGTCAGGCCAGATCGTGTT 59.604 50.000 5.01 0.00 0.00 3.32
334 335 1.262417 TGTCAGGCCAGATCGTGTTA 58.738 50.000 5.01 0.00 0.00 2.41
335 336 1.621317 TGTCAGGCCAGATCGTGTTAA 59.379 47.619 5.01 0.00 0.00 2.01
336 337 2.000447 GTCAGGCCAGATCGTGTTAAC 59.000 52.381 5.01 0.00 0.00 2.01
337 338 1.066430 TCAGGCCAGATCGTGTTAACC 60.066 52.381 5.01 0.00 0.00 2.85
338 339 0.981183 AGGCCAGATCGTGTTAACCA 59.019 50.000 5.01 0.00 0.00 3.67
339 340 1.349688 AGGCCAGATCGTGTTAACCAA 59.650 47.619 5.01 0.00 0.00 3.67
340 341 1.737793 GGCCAGATCGTGTTAACCAAG 59.262 52.381 0.00 0.00 0.00 3.61
341 342 2.614481 GGCCAGATCGTGTTAACCAAGA 60.614 50.000 0.00 0.25 35.98 3.02
342 343 3.071479 GCCAGATCGTGTTAACCAAGAA 58.929 45.455 2.48 0.00 35.16 2.52
343 344 3.689649 GCCAGATCGTGTTAACCAAGAAT 59.310 43.478 2.48 0.00 35.16 2.40
344 345 4.873827 GCCAGATCGTGTTAACCAAGAATA 59.126 41.667 2.48 0.00 35.16 1.75
345 346 5.527582 GCCAGATCGTGTTAACCAAGAATAT 59.472 40.000 2.48 0.00 35.16 1.28
346 347 6.038271 GCCAGATCGTGTTAACCAAGAATATT 59.962 38.462 2.48 0.00 35.16 1.28
347 348 7.409697 CCAGATCGTGTTAACCAAGAATATTG 58.590 38.462 2.48 0.00 35.16 1.90
348 349 7.065803 CCAGATCGTGTTAACCAAGAATATTGT 59.934 37.037 2.48 0.00 35.16 2.71
349 350 8.450964 CAGATCGTGTTAACCAAGAATATTGTT 58.549 33.333 2.48 0.00 35.16 2.83
350 351 9.010029 AGATCGTGTTAACCAAGAATATTGTTT 57.990 29.630 2.48 0.00 35.16 2.83
351 352 9.620660 GATCGTGTTAACCAAGAATATTGTTTT 57.379 29.630 2.48 0.00 35.16 2.43
353 354 9.881529 TCGTGTTAACCAAGAATATTGTTTTAC 57.118 29.630 2.48 0.00 0.00 2.01
354 355 9.666626 CGTGTTAACCAAGAATATTGTTTTACA 57.333 29.630 2.48 0.00 0.00 2.41
373 374 9.562752 GTTTTACATAATTGTTCAAGAAAACGC 57.437 29.630 0.00 0.00 33.28 4.84
374 375 9.522804 TTTTACATAATTGTTCAAGAAAACGCT 57.477 25.926 0.00 0.00 37.28 5.07
376 377 9.601971 TTACATAATTGTTCAAGAAAACGCTAC 57.398 29.630 0.00 0.00 37.28 3.58
377 378 7.871853 ACATAATTGTTCAAGAAAACGCTACT 58.128 30.769 0.00 0.00 29.55 2.57
378 379 8.015658 ACATAATTGTTCAAGAAAACGCTACTC 58.984 33.333 0.00 0.00 29.55 2.59
379 380 4.446857 TTGTTCAAGAAAACGCTACTCG 57.553 40.909 0.00 0.00 45.38 4.18
394 395 6.823678 CGCTACTCGTAACCAAGAATATTT 57.176 37.500 0.00 0.00 0.00 1.40
395 396 7.230466 CGCTACTCGTAACCAAGAATATTTT 57.770 36.000 0.00 0.00 0.00 1.82
396 397 7.681903 CGCTACTCGTAACCAAGAATATTTTT 58.318 34.615 0.00 0.00 0.00 1.94
417 418 6.932901 TTTTGTACAGTTAATCGGTACTCG 57.067 37.500 14.39 0.00 44.14 4.18
418 419 5.627499 TTGTACAGTTAATCGGTACTCGT 57.373 39.130 14.39 0.00 44.14 4.18
419 420 6.735678 TTGTACAGTTAATCGGTACTCGTA 57.264 37.500 14.39 0.00 44.14 3.43
420 421 6.349973 TGTACAGTTAATCGGTACTCGTAG 57.650 41.667 14.39 0.00 44.14 3.51
421 422 4.889832 ACAGTTAATCGGTACTCGTAGG 57.110 45.455 0.00 0.00 40.32 3.18
422 423 3.629398 ACAGTTAATCGGTACTCGTAGGG 59.371 47.826 0.00 0.00 40.32 3.53
423 424 3.629398 CAGTTAATCGGTACTCGTAGGGT 59.371 47.826 0.00 0.00 40.32 4.34
424 425 3.629398 AGTTAATCGGTACTCGTAGGGTG 59.371 47.826 0.00 0.00 40.32 4.61
425 426 2.425143 AATCGGTACTCGTAGGGTGA 57.575 50.000 0.00 0.00 40.32 4.02
426 427 1.673168 ATCGGTACTCGTAGGGTGAC 58.327 55.000 0.00 0.00 40.32 3.67
427 428 0.392998 TCGGTACTCGTAGGGTGACC 60.393 60.000 0.00 0.00 45.82 4.02
440 441 2.896168 GGGTGACCGAATCGAATAACA 58.104 47.619 3.36 0.00 43.64 2.41
441 442 2.606272 GGGTGACCGAATCGAATAACAC 59.394 50.000 3.36 6.65 43.64 3.32
442 443 2.606272 GGTGACCGAATCGAATAACACC 59.394 50.000 3.36 11.66 39.38 4.16
443 444 3.518590 GTGACCGAATCGAATAACACCT 58.481 45.455 3.36 0.00 0.00 4.00
444 445 4.440525 GGTGACCGAATCGAATAACACCTA 60.441 45.833 19.62 0.00 41.89 3.08
445 446 5.287226 GTGACCGAATCGAATAACACCTAT 58.713 41.667 3.36 0.00 0.00 2.57
446 447 5.751990 GTGACCGAATCGAATAACACCTATT 59.248 40.000 3.36 0.00 32.60 1.73
447 448 5.981315 TGACCGAATCGAATAACACCTATTC 59.019 40.000 3.36 0.00 41.76 1.75
448 449 5.909477 ACCGAATCGAATAACACCTATTCA 58.091 37.500 3.36 0.00 44.32 2.57
449 450 6.522054 ACCGAATCGAATAACACCTATTCAT 58.478 36.000 3.36 0.00 44.32 2.57
450 451 6.645415 ACCGAATCGAATAACACCTATTCATC 59.355 38.462 3.36 0.95 44.32 2.92
451 452 6.868864 CCGAATCGAATAACACCTATTCATCT 59.131 38.462 3.36 0.00 44.32 2.90
452 453 8.027189 CCGAATCGAATAACACCTATTCATCTA 58.973 37.037 3.36 0.00 44.32 1.98
453 454 9.066939 CGAATCGAATAACACCTATTCATCTAG 57.933 37.037 0.00 0.00 44.32 2.43
454 455 9.915629 GAATCGAATAACACCTATTCATCTAGT 57.084 33.333 0.00 0.00 44.32 2.57
504 505 9.610705 TCTTTCATTTGGAAAAATGTTGAATGA 57.389 25.926 10.14 0.00 44.52 2.57
511 512 9.709495 TTTGGAAAAATGTTGAATGATAAGGAG 57.291 29.630 0.00 0.00 0.00 3.69
512 513 8.648698 TGGAAAAATGTTGAATGATAAGGAGA 57.351 30.769 0.00 0.00 0.00 3.71
513 514 8.742777 TGGAAAAATGTTGAATGATAAGGAGAG 58.257 33.333 0.00 0.00 0.00 3.20
519 520 7.666063 TGTTGAATGATAAGGAGAGAGATGA 57.334 36.000 0.00 0.00 0.00 2.92
550 551 2.786495 CGAGATGGCCAGCGTAGGT 61.786 63.158 16.75 0.00 41.48 3.08
552 553 0.032267 GAGATGGCCAGCGTAGGTAC 59.968 60.000 16.75 0.00 35.08 3.34
554 555 0.529992 GATGGCCAGCGTAGGTACAC 60.530 60.000 13.05 0.00 35.08 2.90
562 803 1.337703 AGCGTAGGTACACACAAACGA 59.662 47.619 0.00 0.00 36.81 3.85
581 822 3.873910 TCCGTGGAAACCGGAGAA 58.126 55.556 9.46 0.00 44.61 2.87
582 823 2.134991 TCCGTGGAAACCGGAGAAA 58.865 52.632 9.46 0.00 44.61 2.52
585 826 1.572941 GTGGAAACCGGAGAAACGC 59.427 57.895 9.46 0.00 0.00 4.84
613 854 3.123621 CGTAGGTGACAGCAGATGAAAAC 59.876 47.826 7.50 0.00 0.00 2.43
614 855 2.146342 AGGTGACAGCAGATGAAAACG 58.854 47.619 7.50 0.00 0.00 3.60
651 906 1.033574 CTCCCATGTCTCTCCGTACC 58.966 60.000 0.00 0.00 0.00 3.34
652 907 0.750546 TCCCATGTCTCTCCGTACCG 60.751 60.000 0.00 0.00 0.00 4.02
655 910 1.602851 CCATGTCTCTCCGTACCGTAG 59.397 57.143 0.00 0.00 0.00 3.51
748 1003 1.213537 GTTCGCTGCGTACCTACCA 59.786 57.895 22.48 0.00 0.00 3.25
750 1005 2.531927 TTCGCTGCGTACCTACCACG 62.532 60.000 22.48 0.00 42.24 4.94
803 1058 1.388065 CGCTTCACTCTCTCCCCGAT 61.388 60.000 0.00 0.00 0.00 4.18
804 1059 0.387565 GCTTCACTCTCTCCCCGATC 59.612 60.000 0.00 0.00 0.00 3.69
805 1060 1.769026 CTTCACTCTCTCCCCGATCA 58.231 55.000 0.00 0.00 0.00 2.92
822 1077 1.005037 CATCGCCCGGCTGCTATTA 60.005 57.895 8.05 0.00 0.00 0.98
877 1132 0.108804 CAGTGCCACTACCACTACCG 60.109 60.000 0.00 0.00 41.34 4.02
904 1159 1.447314 GTCCAGCCGGTTCCTAACG 60.447 63.158 1.90 0.00 0.00 3.18
971 1226 4.803426 GCAGCAGGTCGTCCCGAG 62.803 72.222 0.00 0.00 36.23 4.63
978 1233 2.722201 GGTCGTCCCGAGCCTTCAT 61.722 63.158 4.60 0.00 46.63 2.57
979 1234 1.519455 GTCGTCCCGAGCCTTCATG 60.519 63.158 0.00 0.00 36.23 3.07
1005 1352 2.231721 TGTCGATCGTGTTAACATGGGA 59.768 45.455 24.12 16.81 33.80 4.37
1016 1363 1.453155 AACATGGGACTGATTGCGTC 58.547 50.000 0.00 0.00 0.00 5.19
1212 1577 3.168628 CTGCGGTCAGTTTGCTTTG 57.831 52.632 0.00 0.00 35.61 2.77
1213 1578 0.662619 CTGCGGTCAGTTTGCTTTGA 59.337 50.000 0.00 0.00 35.61 2.69
1214 1579 1.267806 CTGCGGTCAGTTTGCTTTGAT 59.732 47.619 0.00 0.00 35.61 2.57
1215 1580 1.266718 TGCGGTCAGTTTGCTTTGATC 59.733 47.619 0.00 0.00 0.00 2.92
1216 1581 1.266718 GCGGTCAGTTTGCTTTGATCA 59.733 47.619 0.00 0.00 0.00 2.92
1217 1582 2.287547 GCGGTCAGTTTGCTTTGATCAA 60.288 45.455 3.38 3.38 0.00 2.57
1218 1583 3.300009 CGGTCAGTTTGCTTTGATCAAC 58.700 45.455 7.89 0.00 0.00 3.18
1219 1584 3.243035 CGGTCAGTTTGCTTTGATCAACA 60.243 43.478 7.89 0.63 0.00 3.33
1220 1585 4.681744 GGTCAGTTTGCTTTGATCAACAA 58.318 39.130 7.89 7.51 36.65 2.83
1221 1586 4.504097 GGTCAGTTTGCTTTGATCAACAAC 59.496 41.667 7.89 8.92 38.29 3.32
1222 1587 5.101628 GTCAGTTTGCTTTGATCAACAACA 58.898 37.500 7.89 3.88 38.29 3.33
1223 1588 5.004726 GTCAGTTTGCTTTGATCAACAACAC 59.995 40.000 7.89 10.53 38.29 3.32
1224 1589 4.863689 CAGTTTGCTTTGATCAACAACACA 59.136 37.500 7.89 0.00 38.29 3.72
1225 1590 4.864247 AGTTTGCTTTGATCAACAACACAC 59.136 37.500 7.89 9.67 38.29 3.82
1226 1591 4.446994 TTGCTTTGATCAACAACACACA 57.553 36.364 7.89 0.00 38.29 3.72
1227 1592 4.652421 TGCTTTGATCAACAACACACAT 57.348 36.364 7.89 0.00 38.29 3.21
1228 1593 4.609947 TGCTTTGATCAACAACACACATC 58.390 39.130 7.89 0.00 38.29 3.06
1229 1594 4.097589 TGCTTTGATCAACAACACACATCA 59.902 37.500 7.89 0.00 38.29 3.07
1230 1595 4.442073 GCTTTGATCAACAACACACATCAC 59.558 41.667 7.89 0.00 38.29 3.06
1231 1596 5.734220 GCTTTGATCAACAACACACATCACT 60.734 40.000 7.89 0.00 38.29 3.41
1232 1597 5.833406 TTGATCAACAACACACATCACTT 57.167 34.783 3.38 0.00 33.18 3.16
1233 1598 5.422666 TGATCAACAACACACATCACTTC 57.577 39.130 0.00 0.00 0.00 3.01
1234 1599 4.880696 TGATCAACAACACACATCACTTCA 59.119 37.500 0.00 0.00 0.00 3.02
1235 1600 4.614555 TCAACAACACACATCACTTCAC 57.385 40.909 0.00 0.00 0.00 3.18
1236 1601 4.260985 TCAACAACACACATCACTTCACT 58.739 39.130 0.00 0.00 0.00 3.41
1237 1602 4.699735 TCAACAACACACATCACTTCACTT 59.300 37.500 0.00 0.00 0.00 3.16
1238 1603 4.882671 ACAACACACATCACTTCACTTC 57.117 40.909 0.00 0.00 0.00 3.01
1239 1604 3.627577 ACAACACACATCACTTCACTTCC 59.372 43.478 0.00 0.00 0.00 3.46
1240 1605 3.558931 ACACACATCACTTCACTTCCA 57.441 42.857 0.00 0.00 0.00 3.53
1241 1606 4.090761 ACACACATCACTTCACTTCCAT 57.909 40.909 0.00 0.00 0.00 3.41
1242 1607 4.464008 ACACACATCACTTCACTTCCATT 58.536 39.130 0.00 0.00 0.00 3.16
1243 1608 5.620206 ACACACATCACTTCACTTCCATTA 58.380 37.500 0.00 0.00 0.00 1.90
1244 1609 5.470098 ACACACATCACTTCACTTCCATTAC 59.530 40.000 0.00 0.00 0.00 1.89
1245 1610 4.690748 ACACATCACTTCACTTCCATTACG 59.309 41.667 0.00 0.00 0.00 3.18
1246 1611 4.690748 CACATCACTTCACTTCCATTACGT 59.309 41.667 0.00 0.00 0.00 3.57
1247 1612 5.179368 CACATCACTTCACTTCCATTACGTT 59.821 40.000 0.00 0.00 0.00 3.99
1248 1613 6.367695 CACATCACTTCACTTCCATTACGTTA 59.632 38.462 0.00 0.00 0.00 3.18
1249 1614 6.932400 ACATCACTTCACTTCCATTACGTTAA 59.068 34.615 0.00 0.00 0.00 2.01
1250 1615 6.774354 TCACTTCACTTCCATTACGTTAAC 57.226 37.500 0.00 0.00 0.00 2.01
1251 1616 6.282167 TCACTTCACTTCCATTACGTTAACA 58.718 36.000 6.39 0.00 0.00 2.41
1252 1617 6.762187 TCACTTCACTTCCATTACGTTAACAA 59.238 34.615 6.39 0.00 0.00 2.83
1253 1618 7.042321 TCACTTCACTTCCATTACGTTAACAAG 60.042 37.037 6.39 2.50 0.00 3.16
1254 1619 6.764560 ACTTCACTTCCATTACGTTAACAAGT 59.235 34.615 6.39 3.13 0.00 3.16
1255 1620 6.533819 TCACTTCCATTACGTTAACAAGTG 57.466 37.500 19.20 19.20 40.30 3.16
1256 1621 6.050432 TCACTTCCATTACGTTAACAAGTGT 58.950 36.000 22.07 9.71 40.02 3.55
1257 1622 6.201425 TCACTTCCATTACGTTAACAAGTGTC 59.799 38.462 22.07 0.00 40.02 3.67
1258 1623 6.018588 CACTTCCATTACGTTAACAAGTGTCA 60.019 38.462 17.90 0.00 36.21 3.58
1259 1624 5.910637 TCCATTACGTTAACAAGTGTCAC 57.089 39.130 6.39 0.00 0.00 3.67
1260 1625 4.445052 TCCATTACGTTAACAAGTGTCACG 59.555 41.667 6.39 12.27 39.27 4.35
1261 1626 3.839823 TTACGTTAACAAGTGTCACGC 57.160 42.857 6.39 0.00 37.84 5.34
1262 1627 1.930567 ACGTTAACAAGTGTCACGCT 58.069 45.000 6.39 0.00 37.84 5.07
1263 1628 3.082698 ACGTTAACAAGTGTCACGCTA 57.917 42.857 6.39 0.00 37.84 4.26
1264 1629 3.446799 ACGTTAACAAGTGTCACGCTAA 58.553 40.909 6.39 0.00 37.84 3.09
1265 1630 3.243643 ACGTTAACAAGTGTCACGCTAAC 59.756 43.478 6.39 3.99 37.84 2.34
1267 1632 1.214367 AACAAGTGTCACGCTAACGG 58.786 50.000 0.00 0.00 46.04 4.44
1268 1633 0.386476 ACAAGTGTCACGCTAACGGA 59.614 50.000 0.00 0.00 46.04 4.69
1269 1634 1.000506 ACAAGTGTCACGCTAACGGAT 59.999 47.619 0.00 0.00 46.04 4.18
1270 1635 1.654105 CAAGTGTCACGCTAACGGATC 59.346 52.381 0.00 0.00 46.04 3.36
1271 1636 0.885879 AGTGTCACGCTAACGGATCA 59.114 50.000 0.00 0.00 46.04 2.92
1272 1637 1.476891 AGTGTCACGCTAACGGATCAT 59.523 47.619 0.00 0.00 46.04 2.45
1273 1638 1.588404 GTGTCACGCTAACGGATCATG 59.412 52.381 0.00 0.00 46.04 3.07
1274 1639 0.577269 GTCACGCTAACGGATCATGC 59.423 55.000 0.00 0.00 46.04 4.06
1275 1640 0.174617 TCACGCTAACGGATCATGCA 59.825 50.000 0.00 0.00 46.04 3.96
1276 1641 1.202521 TCACGCTAACGGATCATGCAT 60.203 47.619 0.00 0.00 46.04 3.96
1277 1642 1.070376 CACGCTAACGGATCATGCATG 60.070 52.381 21.07 21.07 46.04 4.06
1278 1643 1.220529 CGCTAACGGATCATGCATGT 58.779 50.000 25.43 13.42 34.97 3.21
1279 1644 1.193203 CGCTAACGGATCATGCATGTC 59.807 52.381 25.43 20.19 34.97 3.06
1280 1645 2.212652 GCTAACGGATCATGCATGTCA 58.787 47.619 25.43 8.61 0.00 3.58
1281 1646 2.810274 GCTAACGGATCATGCATGTCAT 59.190 45.455 25.43 13.32 35.31 3.06
1282 1647 3.120408 GCTAACGGATCATGCATGTCATC 60.120 47.826 25.43 20.38 31.79 2.92
1283 1648 1.888215 ACGGATCATGCATGTCATCC 58.112 50.000 26.67 26.67 31.79 3.51
1284 1649 1.419012 ACGGATCATGCATGTCATCCT 59.581 47.619 30.26 20.50 33.78 3.24
1730 2289 4.219999 GCGCTGGAGGAGGAGCTC 62.220 72.222 4.71 4.71 32.70 4.09
1731 2290 3.898509 CGCTGGAGGAGGAGCTCG 61.899 72.222 7.83 0.00 32.70 5.03
1732 2291 3.535962 GCTGGAGGAGGAGCTCGG 61.536 72.222 7.83 0.00 32.12 4.63
1733 2292 3.535962 CTGGAGGAGGAGCTCGGC 61.536 72.222 7.83 1.44 0.00 5.54
1796 2355 3.010088 CGTCGTCGTGCTCAACATA 57.990 52.632 0.00 0.00 0.00 2.29
1824 2383 3.423206 CACCGACAAGACAAAGTACGTAC 59.577 47.826 18.10 18.10 0.00 3.67
1825 2384 2.653584 CCGACAAGACAAAGTACGTACG 59.346 50.000 19.49 15.01 0.00 3.67
1857 3547 2.095853 CAGTTAACCGACCATGCATGAC 59.904 50.000 28.31 18.79 0.00 3.06
1858 3548 1.062002 GTTAACCGACCATGCATGACG 59.938 52.381 28.31 27.44 0.00 4.35
1859 3549 0.533032 TAACCGACCATGCATGACGA 59.467 50.000 31.69 18.35 32.49 4.20
1860 3550 1.019278 AACCGACCATGCATGACGAC 61.019 55.000 31.69 17.09 32.49 4.34
1861 3551 2.173669 CCGACCATGCATGACGACC 61.174 63.158 31.69 16.06 32.49 4.79
1864 3554 1.421410 GACCATGCATGACGACCGAC 61.421 60.000 28.31 6.67 0.00 4.79
1872 3562 0.311165 ATGACGACCGACGATCCATC 59.689 55.000 0.00 0.00 45.77 3.51
1876 3566 0.663688 CGACCGACGATCCATCTTCT 59.336 55.000 0.00 0.00 45.77 2.85
2096 3878 4.570369 GCTTAATCCTTCTGCTCTTCTGAC 59.430 45.833 0.00 0.00 0.00 3.51
2179 3961 2.560119 GCCCAACAACGCCATGACA 61.560 57.895 0.00 0.00 0.00 3.58
2182 3964 1.172180 CCAACAACGCCATGACACCT 61.172 55.000 0.00 0.00 0.00 4.00
2226 4008 2.345244 CCAGGTCAGTCGCAGCTT 59.655 61.111 0.00 0.00 0.00 3.74
2227 4009 2.031516 CCAGGTCAGTCGCAGCTTG 61.032 63.158 0.00 0.00 0.00 4.01
2229 4011 2.358003 GGTCAGTCGCAGCTTGCT 60.358 61.111 6.58 0.00 42.25 3.91
2230 4012 2.386660 GGTCAGTCGCAGCTTGCTC 61.387 63.158 6.58 1.13 42.25 4.26
2231 4013 1.373999 GTCAGTCGCAGCTTGCTCT 60.374 57.895 6.58 3.00 42.25 4.09
2249 4032 2.363406 GCTTCCAAGCCTGGCCAT 60.363 61.111 16.57 1.11 46.20 4.40
2254 4037 2.361992 CAAGCCTGGCCATGCTCA 60.362 61.111 32.18 0.00 36.66 4.26
2255 4038 1.756950 CAAGCCTGGCCATGCTCAT 60.757 57.895 32.18 17.56 36.66 2.90
2257 4040 0.616679 AAGCCTGGCCATGCTCATTT 60.617 50.000 32.18 16.49 36.66 2.32
2258 4041 1.143183 GCCTGGCCATGCTCATTTG 59.857 57.895 24.15 0.55 0.00 2.32
2263 4046 2.166870 CTGGCCATGCTCATTTGCTTAA 59.833 45.455 5.51 0.00 0.00 1.85
2264 4047 2.094078 TGGCCATGCTCATTTGCTTAAC 60.094 45.455 0.00 0.00 0.00 2.01
2265 4048 2.167075 GGCCATGCTCATTTGCTTAACT 59.833 45.455 0.00 0.00 0.00 2.24
2268 4051 2.617250 TGCTCATTTGCTTAACTGCG 57.383 45.000 0.00 0.00 35.36 5.18
2269 4052 1.262882 GCTCATTTGCTTAACTGCGC 58.737 50.000 0.00 0.00 35.36 6.09
2270 4053 1.401409 GCTCATTTGCTTAACTGCGCA 60.401 47.619 10.98 10.98 35.36 6.09
2271 4054 2.512885 CTCATTTGCTTAACTGCGCAG 58.487 47.619 34.89 34.89 37.46 5.18
2280 5269 3.365364 GCTTAACTGCGCAGACTGAAAAT 60.365 43.478 42.03 15.97 0.00 1.82
2283 5272 0.455633 CTGCGCAGACTGAAAATGGC 60.456 55.000 33.66 0.00 0.00 4.40
2289 5278 2.543653 GCAGACTGAAAATGGCAAACGT 60.544 45.455 6.65 0.00 0.00 3.99
2298 5287 0.031994 ATGGCAAACGTTTGACCTGC 59.968 50.000 37.02 25.10 45.65 4.85
2426 5673 1.338200 CCAGCCAGTACCAGTGAAGTC 60.338 57.143 0.00 0.00 0.00 3.01
2428 5675 1.620819 AGCCAGTACCAGTGAAGTCAG 59.379 52.381 0.00 0.00 0.00 3.51
2435 5682 1.271054 ACCAGTGAAGTCAGCATCCAC 60.271 52.381 0.00 0.00 0.00 4.02
2451 5698 4.074526 ACGGAGTCGCAGCTGCAT 62.075 61.111 36.03 22.30 29.74 3.96
2484 5744 2.899838 TCGTGTGCCAGTTGCCAC 60.900 61.111 0.00 0.00 40.16 5.01
2495 5756 4.234574 GCCAGTTGCCACAAACTAAATAC 58.765 43.478 0.00 0.00 38.34 1.89
2505 5766 5.801947 CCACAAACTAAATACAGATGCTTGC 59.198 40.000 0.00 0.00 0.00 4.01
2644 5973 1.913778 TGTGCAGCTCCATTTGTGAT 58.086 45.000 0.00 0.00 0.00 3.06
2655 5984 5.119931 TCCATTTGTGATGTTGTACTTGC 57.880 39.130 0.00 0.00 0.00 4.01
2660 5989 3.540617 TGTGATGTTGTACTTGCACTGT 58.459 40.909 0.00 0.00 0.00 3.55
2669 5998 7.711846 TGTTGTACTTGCACTGTCATAAAAAT 58.288 30.769 0.00 0.00 0.00 1.82
2671 6000 9.840427 GTTGTACTTGCACTGTCATAAAAATAT 57.160 29.630 0.00 0.00 0.00 1.28
2828 6164 9.482175 ACCTCTACAAATAGTCTTTCTCTGTAT 57.518 33.333 0.00 0.00 0.00 2.29
2896 6232 3.055094 ACTGCACTAGTCAAACATAGGGG 60.055 47.826 0.00 0.00 33.17 4.79
2951 6287 0.184933 TTTACACCACCTTGCCAGCT 59.815 50.000 0.00 0.00 0.00 4.24
2966 6302 0.461548 CAGCTGTCCGATCTGCCTAA 59.538 55.000 5.25 0.00 33.76 2.69
2967 6303 1.134699 CAGCTGTCCGATCTGCCTAAA 60.135 52.381 5.25 0.00 33.76 1.85
2968 6304 1.134670 AGCTGTCCGATCTGCCTAAAC 60.135 52.381 0.00 0.00 33.76 2.01
3082 6427 4.424711 TCCATTGCAGCCCCGGTC 62.425 66.667 0.00 0.00 0.00 4.79
3207 6552 4.431131 CTCCATTGCAGCCCGGGT 62.431 66.667 24.63 5.98 0.00 5.28
3422 6767 2.045438 TGCAACATAGCACCGGGG 60.045 61.111 6.32 0.84 40.11 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.043116 TGTAGCCTCCCGTGAGATGG 61.043 60.000 0.00 0.00 41.42 3.51
1 2 0.103208 GTGTAGCCTCCCGTGAGATG 59.897 60.000 0.00 0.00 41.42 2.90
2 3 1.043673 GGTGTAGCCTCCCGTGAGAT 61.044 60.000 0.00 0.00 41.42 2.75
3 4 1.681327 GGTGTAGCCTCCCGTGAGA 60.681 63.158 0.00 0.00 41.42 3.27
4 5 2.722201 GGGTGTAGCCTCCCGTGAG 61.722 68.421 0.00 0.00 34.81 3.51
5 6 2.682494 GGGTGTAGCCTCCCGTGA 60.682 66.667 0.00 0.00 34.81 4.35
9 10 0.404426 AAACAAGGGTGTAGCCTCCC 59.596 55.000 2.68 0.00 43.55 4.30
10 11 2.287977 AAAACAAGGGTGTAGCCTCC 57.712 50.000 2.68 0.00 36.80 4.30
11 12 2.956333 ACAAAAACAAGGGTGTAGCCTC 59.044 45.455 2.68 0.00 36.80 4.70
12 13 3.026707 ACAAAAACAAGGGTGTAGCCT 57.973 42.857 0.00 0.00 36.80 4.58
13 14 3.812156 AACAAAAACAAGGGTGTAGCC 57.188 42.857 0.00 0.00 36.80 3.93
14 15 5.416083 AGAAAACAAAAACAAGGGTGTAGC 58.584 37.500 0.00 0.00 36.80 3.58
15 16 7.899178 AAAGAAAACAAAAACAAGGGTGTAG 57.101 32.000 0.00 0.00 36.80 2.74
16 17 8.678593 AAAAAGAAAACAAAAACAAGGGTGTA 57.321 26.923 0.00 0.00 36.80 2.90
17 18 7.575414 AAAAAGAAAACAAAAACAAGGGTGT 57.425 28.000 0.00 0.00 40.75 4.16
61 62 8.770010 TTCCTTGGAGTATTTGGAAGTAAAAA 57.230 30.769 0.00 0.00 33.48 1.94
62 63 8.770010 TTTCCTTGGAGTATTTGGAAGTAAAA 57.230 30.769 0.00 0.00 37.96 1.52
63 64 8.950007 ATTTCCTTGGAGTATTTGGAAGTAAA 57.050 30.769 0.00 0.00 37.96 2.01
97 98 9.905171 ACAAATGTTTTTATGCAAAGTGTTTTT 57.095 22.222 0.00 0.00 0.00 1.94
157 158 9.685276 TGAGAAACATATTCTCCATACACATTT 57.315 29.630 13.87 0.00 43.14 2.32
158 159 9.857656 ATGAGAAACATATTCTCCATACACATT 57.142 29.630 13.87 0.00 43.14 2.71
159 160 9.281371 CATGAGAAACATATTCTCCATACACAT 57.719 33.333 13.87 0.00 43.14 3.21
160 161 8.267183 ACATGAGAAACATATTCTCCATACACA 58.733 33.333 13.87 0.00 43.14 3.72
161 162 8.668510 ACATGAGAAACATATTCTCCATACAC 57.331 34.615 13.87 0.00 43.14 2.90
210 211 7.307337 GGACGAATTCTTGAACAATGCATTTTT 60.307 33.333 9.83 10.21 0.00 1.94
211 212 6.146021 GGACGAATTCTTGAACAATGCATTTT 59.854 34.615 9.83 7.81 0.00 1.82
212 213 5.634859 GGACGAATTCTTGAACAATGCATTT 59.365 36.000 9.83 0.00 0.00 2.32
213 214 5.163513 GGACGAATTCTTGAACAATGCATT 58.836 37.500 5.99 5.99 0.00 3.56
214 215 4.672542 CGGACGAATTCTTGAACAATGCAT 60.673 41.667 3.52 0.00 0.00 3.96
215 216 3.364864 CGGACGAATTCTTGAACAATGCA 60.365 43.478 3.52 0.00 0.00 3.96
216 217 3.120338 TCGGACGAATTCTTGAACAATGC 60.120 43.478 3.52 0.00 0.00 3.56
217 218 4.661993 TCGGACGAATTCTTGAACAATG 57.338 40.909 3.52 0.00 0.00 2.82
218 219 5.880054 AATCGGACGAATTCTTGAACAAT 57.120 34.783 3.52 0.00 0.00 2.71
219 220 6.788684 TTAATCGGACGAATTCTTGAACAA 57.211 33.333 3.52 0.00 0.00 2.83
220 221 6.978343 ATTAATCGGACGAATTCTTGAACA 57.022 33.333 3.52 0.00 0.00 3.18
221 222 9.931210 AATAATTAATCGGACGAATTCTTGAAC 57.069 29.630 3.52 0.00 0.00 3.18
227 228 9.853921 ACGTTAAATAATTAATCGGACGAATTC 57.146 29.630 14.44 0.00 33.76 2.17
228 229 9.640974 CACGTTAAATAATTAATCGGACGAATT 57.359 29.630 14.44 0.00 33.76 2.17
229 230 7.795272 GCACGTTAAATAATTAATCGGACGAAT 59.205 33.333 14.44 0.00 33.76 3.34
230 231 7.118724 GCACGTTAAATAATTAATCGGACGAA 58.881 34.615 14.44 0.00 33.76 3.85
231 232 6.292274 GGCACGTTAAATAATTAATCGGACGA 60.292 38.462 14.44 0.00 33.76 4.20
232 233 5.842327 GGCACGTTAAATAATTAATCGGACG 59.158 40.000 0.00 8.98 33.76 4.79
233 234 6.717413 TGGCACGTTAAATAATTAATCGGAC 58.283 36.000 0.00 3.52 33.76 4.79
234 235 6.539464 ACTGGCACGTTAAATAATTAATCGGA 59.461 34.615 0.00 0.00 33.76 4.55
235 236 6.721321 ACTGGCACGTTAAATAATTAATCGG 58.279 36.000 0.00 0.00 33.76 4.18
236 237 9.705471 TTAACTGGCACGTTAAATAATTAATCG 57.295 29.630 15.27 4.69 35.61 3.34
239 240 9.705471 CGATTAACTGGCACGTTAAATAATTAA 57.295 29.630 19.04 4.26 39.31 1.40
240 241 7.851963 GCGATTAACTGGCACGTTAAATAATTA 59.148 33.333 19.04 0.00 39.31 1.40
241 242 6.689669 GCGATTAACTGGCACGTTAAATAATT 59.310 34.615 19.04 8.38 39.31 1.40
242 243 6.037830 AGCGATTAACTGGCACGTTAAATAAT 59.962 34.615 19.04 9.33 39.31 1.28
243 244 5.352016 AGCGATTAACTGGCACGTTAAATAA 59.648 36.000 19.04 6.06 39.31 1.40
244 245 4.871557 AGCGATTAACTGGCACGTTAAATA 59.128 37.500 19.04 5.02 39.31 1.40
245 246 3.687698 AGCGATTAACTGGCACGTTAAAT 59.312 39.130 19.04 11.71 39.31 1.40
246 247 3.068560 AGCGATTAACTGGCACGTTAAA 58.931 40.909 19.04 8.85 39.31 1.52
247 248 2.690786 AGCGATTAACTGGCACGTTAA 58.309 42.857 18.08 18.08 39.80 2.01
248 249 2.373540 AGCGATTAACTGGCACGTTA 57.626 45.000 5.73 5.73 0.00 3.18
249 250 1.997606 GTAGCGATTAACTGGCACGTT 59.002 47.619 7.34 7.34 0.00 3.99
250 251 1.203994 AGTAGCGATTAACTGGCACGT 59.796 47.619 0.00 0.00 0.00 4.49
251 252 1.588404 CAGTAGCGATTAACTGGCACG 59.412 52.381 0.00 0.00 39.55 5.34
256 257 4.650754 ACCTACCAGTAGCGATTAACTG 57.349 45.455 0.00 0.00 42.25 3.16
257 258 4.708421 TCAACCTACCAGTAGCGATTAACT 59.292 41.667 0.00 0.00 31.95 2.24
258 259 4.802563 GTCAACCTACCAGTAGCGATTAAC 59.197 45.833 0.00 0.00 31.95 2.01
259 260 4.142093 GGTCAACCTACCAGTAGCGATTAA 60.142 45.833 0.00 0.00 39.50 1.40
260 261 3.382546 GGTCAACCTACCAGTAGCGATTA 59.617 47.826 0.00 0.00 39.50 1.75
261 262 2.167900 GGTCAACCTACCAGTAGCGATT 59.832 50.000 0.00 0.00 39.50 3.34
262 263 1.755380 GGTCAACCTACCAGTAGCGAT 59.245 52.381 0.00 0.00 39.50 4.58
263 264 1.180029 GGTCAACCTACCAGTAGCGA 58.820 55.000 0.00 0.00 39.50 4.93
264 265 0.179145 CGGTCAACCTACCAGTAGCG 60.179 60.000 0.00 0.00 39.71 4.26
265 266 1.180029 TCGGTCAACCTACCAGTAGC 58.820 55.000 0.00 0.00 39.71 3.58
266 267 3.488721 CGATTCGGTCAACCTACCAGTAG 60.489 52.174 0.00 0.00 39.71 2.57
267 268 2.424601 CGATTCGGTCAACCTACCAGTA 59.575 50.000 0.00 0.00 39.71 2.74
268 269 1.203994 CGATTCGGTCAACCTACCAGT 59.796 52.381 0.00 0.00 39.71 4.00
269 270 1.475280 TCGATTCGGTCAACCTACCAG 59.525 52.381 6.18 0.00 39.71 4.00
270 271 1.548081 TCGATTCGGTCAACCTACCA 58.452 50.000 6.18 0.00 39.71 3.25
271 272 2.660189 TTCGATTCGGTCAACCTACC 57.340 50.000 6.18 0.00 36.08 3.18
272 273 5.005107 GTGTTATTCGATTCGGTCAACCTAC 59.995 44.000 6.18 0.76 0.00 3.18
273 274 5.104374 GTGTTATTCGATTCGGTCAACCTA 58.896 41.667 6.18 0.00 0.00 3.08
274 275 3.930848 GTGTTATTCGATTCGGTCAACCT 59.069 43.478 6.18 0.00 0.00 3.50
275 276 3.063045 GGTGTTATTCGATTCGGTCAACC 59.937 47.826 6.18 3.92 0.00 3.77
276 277 3.930848 AGGTGTTATTCGATTCGGTCAAC 59.069 43.478 6.18 8.12 0.00 3.18
277 278 4.196626 AGGTGTTATTCGATTCGGTCAA 57.803 40.909 6.18 0.00 0.00 3.18
278 279 3.880047 AGGTGTTATTCGATTCGGTCA 57.120 42.857 6.18 0.00 0.00 4.02
279 280 6.449448 GAATAGGTGTTATTCGATTCGGTC 57.551 41.667 6.18 0.00 38.59 4.79
293 294 6.228258 ACAAGTTAACACGATGAATAGGTGT 58.772 36.000 8.61 0.00 46.11 4.16
294 295 6.367695 TGACAAGTTAACACGATGAATAGGTG 59.632 38.462 8.61 0.00 37.67 4.00
295 296 6.460781 TGACAAGTTAACACGATGAATAGGT 58.539 36.000 8.61 0.00 0.00 3.08
296 297 6.036083 CCTGACAAGTTAACACGATGAATAGG 59.964 42.308 8.61 7.83 0.00 2.57
297 298 6.455646 GCCTGACAAGTTAACACGATGAATAG 60.456 42.308 8.61 3.61 0.00 1.73
298 299 5.350365 GCCTGACAAGTTAACACGATGAATA 59.650 40.000 8.61 0.00 0.00 1.75
299 300 4.154195 GCCTGACAAGTTAACACGATGAAT 59.846 41.667 8.61 0.00 0.00 2.57
300 301 3.496884 GCCTGACAAGTTAACACGATGAA 59.503 43.478 8.61 0.00 0.00 2.57
301 302 3.064207 GCCTGACAAGTTAACACGATGA 58.936 45.455 8.61 0.00 0.00 2.92
302 303 2.159627 GGCCTGACAAGTTAACACGATG 59.840 50.000 8.61 4.01 0.00 3.84
303 304 2.224426 TGGCCTGACAAGTTAACACGAT 60.224 45.455 8.61 0.00 0.00 3.73
304 305 1.139256 TGGCCTGACAAGTTAACACGA 59.861 47.619 8.61 0.00 0.00 4.35
305 306 1.531149 CTGGCCTGACAAGTTAACACG 59.469 52.381 8.61 0.35 0.00 4.49
306 307 2.846193 TCTGGCCTGACAAGTTAACAC 58.154 47.619 8.48 0.00 0.00 3.32
307 308 3.674997 GATCTGGCCTGACAAGTTAACA 58.325 45.455 15.36 0.00 0.00 2.41
308 309 2.673368 CGATCTGGCCTGACAAGTTAAC 59.327 50.000 15.36 0.00 0.00 2.01
309 310 2.301870 ACGATCTGGCCTGACAAGTTAA 59.698 45.455 15.36 0.00 0.00 2.01
310 311 1.899814 ACGATCTGGCCTGACAAGTTA 59.100 47.619 15.36 0.00 0.00 2.24
311 312 0.687354 ACGATCTGGCCTGACAAGTT 59.313 50.000 15.36 0.00 0.00 2.66
312 313 0.036952 CACGATCTGGCCTGACAAGT 60.037 55.000 15.36 11.91 0.00 3.16
313 314 0.036952 ACACGATCTGGCCTGACAAG 60.037 55.000 15.36 11.28 0.00 3.16
314 315 0.396435 AACACGATCTGGCCTGACAA 59.604 50.000 15.36 0.00 0.00 3.18
315 316 1.262417 TAACACGATCTGGCCTGACA 58.738 50.000 15.36 0.00 0.00 3.58
316 317 2.000447 GTTAACACGATCTGGCCTGAC 59.000 52.381 15.36 8.14 0.00 3.51
317 318 1.066430 GGTTAACACGATCTGGCCTGA 60.066 52.381 15.40 15.40 0.00 3.86
318 319 1.338674 TGGTTAACACGATCTGGCCTG 60.339 52.381 3.32 2.92 0.00 4.85
319 320 0.981183 TGGTTAACACGATCTGGCCT 59.019 50.000 3.32 0.00 0.00 5.19
320 321 1.737793 CTTGGTTAACACGATCTGGCC 59.262 52.381 8.10 0.00 0.00 5.36
321 322 2.695359 TCTTGGTTAACACGATCTGGC 58.305 47.619 8.10 0.00 0.00 4.85
322 323 7.065803 ACAATATTCTTGGTTAACACGATCTGG 59.934 37.037 8.10 0.00 0.00 3.86
323 324 7.974675 ACAATATTCTTGGTTAACACGATCTG 58.025 34.615 8.10 0.00 0.00 2.90
324 325 8.561738 AACAATATTCTTGGTTAACACGATCT 57.438 30.769 8.10 0.00 0.00 2.75
325 326 9.620660 AAAACAATATTCTTGGTTAACACGATC 57.379 29.630 8.10 0.00 0.00 3.69
327 328 9.881529 GTAAAACAATATTCTTGGTTAACACGA 57.118 29.630 8.10 0.00 0.00 4.35
328 329 9.666626 TGTAAAACAATATTCTTGGTTAACACG 57.333 29.630 8.10 0.00 0.00 4.49
347 348 9.562752 GCGTTTTCTTGAACAATTATGTAAAAC 57.437 29.630 0.00 0.00 39.40 2.43
348 349 9.522804 AGCGTTTTCTTGAACAATTATGTAAAA 57.477 25.926 0.00 0.00 39.40 1.52
350 351 9.601971 GTAGCGTTTTCTTGAACAATTATGTAA 57.398 29.630 0.00 0.00 39.40 2.41
351 352 8.995220 AGTAGCGTTTTCTTGAACAATTATGTA 58.005 29.630 0.00 0.00 39.40 2.29
352 353 7.871853 AGTAGCGTTTTCTTGAACAATTATGT 58.128 30.769 0.00 0.00 43.14 2.29
353 354 7.214449 CGAGTAGCGTTTTCTTGAACAATTATG 59.786 37.037 0.00 0.00 34.64 1.90
354 355 7.234384 CGAGTAGCGTTTTCTTGAACAATTAT 58.766 34.615 0.00 0.00 34.64 1.28
355 356 6.586751 CGAGTAGCGTTTTCTTGAACAATTA 58.413 36.000 0.00 0.00 34.64 1.40
356 357 5.440685 CGAGTAGCGTTTTCTTGAACAATT 58.559 37.500 0.00 0.00 34.64 2.32
357 358 5.018695 CGAGTAGCGTTTTCTTGAACAAT 57.981 39.130 0.00 0.00 34.64 2.71
358 359 4.446857 CGAGTAGCGTTTTCTTGAACAA 57.553 40.909 0.00 0.00 34.64 2.83
393 394 6.922957 ACGAGTACCGATTAACTGTACAAAAA 59.077 34.615 10.17 0.00 40.15 1.94
394 395 6.446318 ACGAGTACCGATTAACTGTACAAAA 58.554 36.000 10.17 0.00 40.15 2.44
395 396 6.012658 ACGAGTACCGATTAACTGTACAAA 57.987 37.500 10.17 0.00 40.15 2.83
396 397 5.627499 ACGAGTACCGATTAACTGTACAA 57.373 39.130 10.17 0.00 40.15 2.41
397 398 5.294306 CCTACGAGTACCGATTAACTGTACA 59.706 44.000 10.17 0.00 40.15 2.90
398 399 5.277538 CCCTACGAGTACCGATTAACTGTAC 60.278 48.000 10.17 0.00 41.76 2.90
399 400 4.816385 CCCTACGAGTACCGATTAACTGTA 59.184 45.833 10.17 0.00 41.76 2.74
400 401 3.629398 CCCTACGAGTACCGATTAACTGT 59.371 47.826 10.17 0.00 41.76 3.55
401 402 3.629398 ACCCTACGAGTACCGATTAACTG 59.371 47.826 10.17 0.00 41.76 3.16
402 403 3.629398 CACCCTACGAGTACCGATTAACT 59.371 47.826 10.17 0.00 41.76 2.24
403 404 3.627577 TCACCCTACGAGTACCGATTAAC 59.372 47.826 10.17 0.00 41.76 2.01
404 405 3.627577 GTCACCCTACGAGTACCGATTAA 59.372 47.826 10.17 0.00 41.76 1.40
405 406 3.206150 GTCACCCTACGAGTACCGATTA 58.794 50.000 10.17 0.00 41.76 1.75
406 407 2.019984 GTCACCCTACGAGTACCGATT 58.980 52.381 10.17 0.00 41.76 3.34
407 408 1.673168 GTCACCCTACGAGTACCGAT 58.327 55.000 10.17 0.00 41.76 4.18
408 409 0.392998 GGTCACCCTACGAGTACCGA 60.393 60.000 10.17 0.00 41.76 4.69
409 410 1.709147 CGGTCACCCTACGAGTACCG 61.709 65.000 0.00 0.00 43.20 4.02
410 411 0.392998 TCGGTCACCCTACGAGTACC 60.393 60.000 0.00 0.00 32.29 3.34
411 412 1.453155 TTCGGTCACCCTACGAGTAC 58.547 55.000 0.00 0.00 37.95 2.73
412 413 2.292267 GATTCGGTCACCCTACGAGTA 58.708 52.381 0.00 0.00 37.95 2.59
413 414 1.101331 GATTCGGTCACCCTACGAGT 58.899 55.000 0.00 0.00 37.95 4.18
414 415 0.029035 CGATTCGGTCACCCTACGAG 59.971 60.000 0.00 0.00 37.95 4.18
415 416 0.392863 TCGATTCGGTCACCCTACGA 60.393 55.000 6.18 0.00 34.47 3.43
416 417 0.452987 TTCGATTCGGTCACCCTACG 59.547 55.000 6.18 0.00 0.00 3.51
417 418 2.884894 ATTCGATTCGGTCACCCTAC 57.115 50.000 6.18 0.00 0.00 3.18
418 419 3.700539 TGTTATTCGATTCGGTCACCCTA 59.299 43.478 6.18 0.00 0.00 3.53
419 420 2.498481 TGTTATTCGATTCGGTCACCCT 59.502 45.455 6.18 0.00 0.00 4.34
420 421 2.606272 GTGTTATTCGATTCGGTCACCC 59.394 50.000 6.18 0.00 0.00 4.61
421 422 2.606272 GGTGTTATTCGATTCGGTCACC 59.394 50.000 6.18 12.81 37.51 4.02
422 423 3.518590 AGGTGTTATTCGATTCGGTCAC 58.481 45.455 6.18 8.36 0.00 3.67
423 424 3.880047 AGGTGTTATTCGATTCGGTCA 57.120 42.857 6.18 0.00 0.00 4.02
424 425 6.449448 GAATAGGTGTTATTCGATTCGGTC 57.551 41.667 6.18 0.00 38.59 4.79
485 486 9.709495 CTCCTTATCATTCAACATTTTTCCAAA 57.291 29.630 0.00 0.00 0.00 3.28
486 487 9.087871 TCTCCTTATCATTCAACATTTTTCCAA 57.912 29.630 0.00 0.00 0.00 3.53
487 488 8.648698 TCTCCTTATCATTCAACATTTTTCCA 57.351 30.769 0.00 0.00 0.00 3.53
488 489 8.960591 TCTCTCCTTATCATTCAACATTTTTCC 58.039 33.333 0.00 0.00 0.00 3.13
490 491 9.745018 TCTCTCTCCTTATCATTCAACATTTTT 57.255 29.630 0.00 0.00 0.00 1.94
491 492 9.917887 ATCTCTCTCCTTATCATTCAACATTTT 57.082 29.630 0.00 0.00 0.00 1.82
492 493 9.339850 CATCTCTCTCCTTATCATTCAACATTT 57.660 33.333 0.00 0.00 0.00 2.32
493 494 8.712103 TCATCTCTCTCCTTATCATTCAACATT 58.288 33.333 0.00 0.00 0.00 2.71
494 495 8.260099 TCATCTCTCTCCTTATCATTCAACAT 57.740 34.615 0.00 0.00 0.00 2.71
495 496 7.666063 TCATCTCTCTCCTTATCATTCAACA 57.334 36.000 0.00 0.00 0.00 3.33
496 497 8.587608 AGATCATCTCTCTCCTTATCATTCAAC 58.412 37.037 0.00 0.00 0.00 3.18
497 498 8.724113 AGATCATCTCTCTCCTTATCATTCAA 57.276 34.615 0.00 0.00 0.00 2.69
498 499 9.819754 TTAGATCATCTCTCTCCTTATCATTCA 57.180 33.333 0.00 0.00 35.28 2.57
500 501 8.752187 GCTTAGATCATCTCTCTCCTTATCATT 58.248 37.037 0.00 0.00 35.28 2.57
501 502 7.894897 TGCTTAGATCATCTCTCTCCTTATCAT 59.105 37.037 0.00 0.00 35.28 2.45
502 503 7.237255 TGCTTAGATCATCTCTCTCCTTATCA 58.763 38.462 0.00 0.00 35.28 2.15
503 504 7.701539 TGCTTAGATCATCTCTCTCCTTATC 57.298 40.000 0.00 0.00 35.28 1.75
504 505 8.669055 ATTGCTTAGATCATCTCTCTCCTTAT 57.331 34.615 0.00 0.00 35.28 1.73
505 506 8.366401 CAATTGCTTAGATCATCTCTCTCCTTA 58.634 37.037 0.00 0.00 35.28 2.69
506 507 6.999705 ATTGCTTAGATCATCTCTCTCCTT 57.000 37.500 0.00 0.00 35.28 3.36
507 508 6.742082 GCAATTGCTTAGATCATCTCTCTCCT 60.742 42.308 23.21 0.00 38.21 3.69
508 509 5.409214 GCAATTGCTTAGATCATCTCTCTCC 59.591 44.000 23.21 0.00 38.21 3.71
509 510 5.118971 CGCAATTGCTTAGATCATCTCTCTC 59.881 44.000 26.86 0.00 39.32 3.20
510 511 4.989797 CGCAATTGCTTAGATCATCTCTCT 59.010 41.667 26.86 0.00 39.32 3.10
511 512 4.987285 TCGCAATTGCTTAGATCATCTCTC 59.013 41.667 26.86 0.00 39.32 3.20
512 513 4.953667 TCGCAATTGCTTAGATCATCTCT 58.046 39.130 26.86 0.00 39.32 3.10
513 514 4.987285 TCTCGCAATTGCTTAGATCATCTC 59.013 41.667 26.86 0.00 39.32 2.75
519 520 2.551459 GCCATCTCGCAATTGCTTAGAT 59.449 45.455 26.90 26.90 40.04 1.98
595 836 1.400242 GCGTTTTCATCTGCTGTCACC 60.400 52.381 0.00 0.00 0.00 4.02
597 838 0.874390 GGCGTTTTCATCTGCTGTCA 59.126 50.000 0.00 0.00 0.00 3.58
598 839 0.179215 CGGCGTTTTCATCTGCTGTC 60.179 55.000 0.00 0.00 0.00 3.51
803 1058 1.468506 TAATAGCAGCCGGGCGATGA 61.469 55.000 14.39 0.94 39.27 2.92
804 1059 0.391661 ATAATAGCAGCCGGGCGATG 60.392 55.000 14.39 8.73 39.27 3.84
805 1060 0.391661 CATAATAGCAGCCGGGCGAT 60.392 55.000 14.39 10.02 39.27 4.58
822 1077 2.517875 GCGGCTGGGCAGAATCAT 60.518 61.111 0.00 0.00 0.00 2.45
895 1150 1.632948 GGCTGGTTCGCGTTAGGAAC 61.633 60.000 5.77 1.99 42.32 3.62
970 1225 0.035152 TCGACAATGGCATGAAGGCT 60.035 50.000 0.00 0.00 44.55 4.58
971 1226 1.002033 GATCGACAATGGCATGAAGGC 60.002 52.381 0.00 0.00 44.50 4.35
973 1228 1.935873 ACGATCGACAATGGCATGAAG 59.064 47.619 24.34 0.00 0.00 3.02
975 1230 1.289276 CACGATCGACAATGGCATGA 58.711 50.000 24.34 0.00 0.00 3.07
976 1231 1.009078 ACACGATCGACAATGGCATG 58.991 50.000 24.34 8.60 0.00 4.06
978 1233 2.371910 TAACACGATCGACAATGGCA 57.628 45.000 24.34 0.00 0.00 4.92
979 1234 2.413796 TGTTAACACGATCGACAATGGC 59.586 45.455 24.34 6.69 0.00 4.40
1005 1352 2.097038 GCAGAGCGACGCAATCAGT 61.097 57.895 23.70 0.00 0.00 3.41
1016 1363 1.075425 CTGGAGAACGAAGCAGAGCG 61.075 60.000 0.00 0.00 0.00 5.03
1107 1472 4.379243 AGCGCGTTCTCCACCCAG 62.379 66.667 8.43 0.00 0.00 4.45
1205 1570 4.446994 TGTGTGTTGTTGATCAAAGCAA 57.553 36.364 10.35 8.51 37.81 3.91
1206 1571 4.097589 TGATGTGTGTTGTTGATCAAAGCA 59.902 37.500 10.35 6.73 37.81 3.91
1207 1572 4.442073 GTGATGTGTGTTGTTGATCAAAGC 59.558 41.667 10.35 4.08 37.81 3.51
1208 1573 5.824429 AGTGATGTGTGTTGTTGATCAAAG 58.176 37.500 10.35 0.00 37.81 2.77
1209 1574 5.833406 AGTGATGTGTGTTGTTGATCAAA 57.167 34.783 10.35 0.00 37.81 2.69
1210 1575 5.356470 TGAAGTGATGTGTGTTGTTGATCAA 59.644 36.000 3.38 3.38 0.00 2.57
1211 1576 4.880696 TGAAGTGATGTGTGTTGTTGATCA 59.119 37.500 0.00 0.00 0.00 2.92
1212 1577 5.008019 AGTGAAGTGATGTGTGTTGTTGATC 59.992 40.000 0.00 0.00 0.00 2.92
1213 1578 4.883585 AGTGAAGTGATGTGTGTTGTTGAT 59.116 37.500 0.00 0.00 0.00 2.57
1214 1579 4.260985 AGTGAAGTGATGTGTGTTGTTGA 58.739 39.130 0.00 0.00 0.00 3.18
1215 1580 4.621068 AGTGAAGTGATGTGTGTTGTTG 57.379 40.909 0.00 0.00 0.00 3.33
1216 1581 4.096382 GGAAGTGAAGTGATGTGTGTTGTT 59.904 41.667 0.00 0.00 0.00 2.83
1217 1582 3.627577 GGAAGTGAAGTGATGTGTGTTGT 59.372 43.478 0.00 0.00 0.00 3.32
1218 1583 3.627123 TGGAAGTGAAGTGATGTGTGTTG 59.373 43.478 0.00 0.00 0.00 3.33
1219 1584 3.884895 TGGAAGTGAAGTGATGTGTGTT 58.115 40.909 0.00 0.00 0.00 3.32
1220 1585 3.558931 TGGAAGTGAAGTGATGTGTGT 57.441 42.857 0.00 0.00 0.00 3.72
1221 1586 5.389830 CGTAATGGAAGTGAAGTGATGTGTG 60.390 44.000 0.00 0.00 0.00 3.82
1222 1587 4.690748 CGTAATGGAAGTGAAGTGATGTGT 59.309 41.667 0.00 0.00 0.00 3.72
1223 1588 4.690748 ACGTAATGGAAGTGAAGTGATGTG 59.309 41.667 0.00 0.00 0.00 3.21
1224 1589 4.894784 ACGTAATGGAAGTGAAGTGATGT 58.105 39.130 0.00 0.00 0.00 3.06
1225 1590 5.862924 AACGTAATGGAAGTGAAGTGATG 57.137 39.130 0.00 0.00 0.00 3.07
1226 1591 6.932400 TGTTAACGTAATGGAAGTGAAGTGAT 59.068 34.615 0.26 0.00 0.00 3.06
1227 1592 6.282167 TGTTAACGTAATGGAAGTGAAGTGA 58.718 36.000 0.26 0.00 0.00 3.41
1228 1593 6.533819 TGTTAACGTAATGGAAGTGAAGTG 57.466 37.500 0.26 0.00 0.00 3.16
1229 1594 6.764560 ACTTGTTAACGTAATGGAAGTGAAGT 59.235 34.615 0.26 0.00 0.00 3.01
1230 1595 7.069569 CACTTGTTAACGTAATGGAAGTGAAG 58.930 38.462 20.02 8.63 40.71 3.02
1231 1596 6.539464 ACACTTGTTAACGTAATGGAAGTGAA 59.461 34.615 26.60 3.76 40.71 3.18
1232 1597 6.050432 ACACTTGTTAACGTAATGGAAGTGA 58.950 36.000 26.60 0.00 40.71 3.41
1233 1598 6.018588 TGACACTTGTTAACGTAATGGAAGTG 60.019 38.462 21.75 21.75 42.81 3.16
1234 1599 6.018507 GTGACACTTGTTAACGTAATGGAAGT 60.019 38.462 0.26 0.53 0.00 3.01
1235 1600 6.360329 GTGACACTTGTTAACGTAATGGAAG 58.640 40.000 0.26 0.00 0.00 3.46
1236 1601 5.050904 CGTGACACTTGTTAACGTAATGGAA 60.051 40.000 3.68 0.00 35.26 3.53
1237 1602 4.445052 CGTGACACTTGTTAACGTAATGGA 59.555 41.667 3.68 0.00 35.26 3.41
1238 1603 4.694177 CGTGACACTTGTTAACGTAATGG 58.306 43.478 3.68 0.00 35.26 3.16
1239 1604 4.084745 AGCGTGACACTTGTTAACGTAATG 60.085 41.667 15.62 0.00 39.22 1.90
1240 1605 4.053295 AGCGTGACACTTGTTAACGTAAT 58.947 39.130 15.62 4.80 39.22 1.89
1241 1606 3.446799 AGCGTGACACTTGTTAACGTAA 58.553 40.909 15.62 0.00 39.22 3.18
1242 1607 3.082698 AGCGTGACACTTGTTAACGTA 57.917 42.857 15.62 0.00 39.22 3.57
1243 1608 1.930567 AGCGTGACACTTGTTAACGT 58.069 45.000 15.62 0.00 39.22 3.99
1244 1609 3.657325 CGTTAGCGTGACACTTGTTAACG 60.657 47.826 19.67 19.67 39.67 3.18
1245 1610 3.362304 CCGTTAGCGTGACACTTGTTAAC 60.362 47.826 3.68 0.00 36.15 2.01
1246 1611 2.796031 CCGTTAGCGTGACACTTGTTAA 59.204 45.455 3.68 0.00 36.15 2.01
1247 1612 2.034432 TCCGTTAGCGTGACACTTGTTA 59.966 45.455 3.68 0.00 36.15 2.41
1248 1613 1.202440 TCCGTTAGCGTGACACTTGTT 60.202 47.619 3.68 0.00 36.15 2.83
1249 1614 0.386476 TCCGTTAGCGTGACACTTGT 59.614 50.000 3.68 0.00 36.15 3.16
1250 1615 1.654105 GATCCGTTAGCGTGACACTTG 59.346 52.381 3.68 0.00 36.15 3.16
1251 1616 1.271379 TGATCCGTTAGCGTGACACTT 59.729 47.619 3.68 0.00 36.15 3.16
1252 1617 0.885879 TGATCCGTTAGCGTGACACT 59.114 50.000 3.68 0.00 36.15 3.55
1253 1618 1.588404 CATGATCCGTTAGCGTGACAC 59.412 52.381 0.00 0.00 31.92 3.67
1254 1619 1.921243 CATGATCCGTTAGCGTGACA 58.079 50.000 0.00 0.00 31.92 3.58
1255 1620 0.577269 GCATGATCCGTTAGCGTGAC 59.423 55.000 0.00 0.00 31.92 3.67
1256 1621 0.174617 TGCATGATCCGTTAGCGTGA 59.825 50.000 0.00 0.00 31.92 4.35
1257 1622 1.070376 CATGCATGATCCGTTAGCGTG 60.070 52.381 22.59 0.00 36.10 5.34
1258 1623 1.220529 CATGCATGATCCGTTAGCGT 58.779 50.000 22.59 0.00 36.15 5.07
1259 1624 1.193203 GACATGCATGATCCGTTAGCG 59.807 52.381 32.75 1.99 37.95 4.26
1260 1625 2.212652 TGACATGCATGATCCGTTAGC 58.787 47.619 32.75 10.13 0.00 3.09
1261 1626 3.434641 GGATGACATGCATGATCCGTTAG 59.565 47.826 32.75 3.35 37.34 2.34
1262 1627 3.071457 AGGATGACATGCATGATCCGTTA 59.929 43.478 32.75 7.43 36.69 3.18
1263 1628 2.158711 AGGATGACATGCATGATCCGTT 60.159 45.455 32.75 16.39 36.69 4.44
1264 1629 1.419012 AGGATGACATGCATGATCCGT 59.581 47.619 32.75 20.23 36.69 4.69
1265 1630 1.804748 CAGGATGACATGCATGATCCG 59.195 52.381 32.75 22.73 39.69 4.18
1266 1631 2.160205 CCAGGATGACATGCATGATCC 58.840 52.381 32.75 30.04 39.69 3.36
1267 1632 2.160205 CCCAGGATGACATGCATGATC 58.840 52.381 32.75 23.51 39.69 2.92
1268 1633 1.822062 GCCCAGGATGACATGCATGAT 60.822 52.381 32.75 16.86 39.69 2.45
1269 1634 0.466739 GCCCAGGATGACATGCATGA 60.467 55.000 32.75 12.33 39.69 3.07
1270 1635 1.792118 CGCCCAGGATGACATGCATG 61.792 60.000 25.09 25.09 39.69 4.06
1271 1636 1.527611 CGCCCAGGATGACATGCAT 60.528 57.895 9.80 0.00 39.69 3.96
1272 1637 2.124612 CGCCCAGGATGACATGCA 60.125 61.111 9.80 0.00 39.69 3.96
1273 1638 3.589881 GCGCCCAGGATGACATGC 61.590 66.667 0.00 0.00 39.69 4.06
1274 1639 3.274586 CGCGCCCAGGATGACATG 61.275 66.667 0.00 0.00 39.69 3.21
1336 1846 3.343421 GTGGAACGGCGTGGTGAC 61.343 66.667 15.70 4.53 0.00 3.67
1734 2293 4.214327 CTCCTCCTCGAAGGCGGC 62.214 72.222 0.00 0.00 40.10 6.53
1735 2294 3.532155 CCTCCTCCTCGAAGGCGG 61.532 72.222 0.00 0.00 41.66 6.13
1736 2295 2.756283 ACCTCCTCCTCGAAGGCG 60.756 66.667 0.00 0.00 36.29 5.52
1737 2296 2.776913 CGACCTCCTCCTCGAAGGC 61.777 68.421 0.00 0.00 36.29 4.35
1738 2297 1.077644 TCGACCTCCTCCTCGAAGG 60.078 63.158 0.00 0.00 36.01 3.46
1739 2298 1.707239 CGTCGACCTCCTCCTCGAAG 61.707 65.000 10.58 0.00 40.46 3.79
1740 2299 1.744368 CGTCGACCTCCTCCTCGAA 60.744 63.158 10.58 0.00 40.46 3.71
1741 2300 2.125229 CGTCGACCTCCTCCTCGA 60.125 66.667 10.58 0.00 36.58 4.04
1742 2301 3.878519 GCGTCGACCTCCTCCTCG 61.879 72.222 10.58 0.00 0.00 4.63
1743 2302 3.519930 GGCGTCGACCTCCTCCTC 61.520 72.222 10.58 0.00 0.00 3.71
1744 2303 3.663815 ATGGCGTCGACCTCCTCCT 62.664 63.158 18.69 5.09 0.00 3.69
1745 2304 3.148279 ATGGCGTCGACCTCCTCC 61.148 66.667 18.69 9.75 0.00 4.30
1746 2305 2.105128 CATGGCGTCGACCTCCTC 59.895 66.667 18.69 3.07 0.00 3.71
1747 2306 4.148825 GCATGGCGTCGACCTCCT 62.149 66.667 18.69 5.68 0.00 3.69
1748 2307 4.148825 AGCATGGCGTCGACCTCC 62.149 66.667 10.58 12.04 0.00 4.30
1749 2308 2.887568 CAGCATGGCGTCGACCTC 60.888 66.667 10.58 2.78 0.00 3.85
1796 2355 2.023414 TTGTCTTGTCGGTGAGCGGT 62.023 55.000 3.57 0.00 0.00 5.68
1838 2397 1.062002 CGTCATGCATGGTCGGTTAAC 59.938 52.381 25.97 13.02 0.00 2.01
1839 2398 1.066787 TCGTCATGCATGGTCGGTTAA 60.067 47.619 29.44 16.77 0.00 2.01
1841 2400 1.019278 GTCGTCATGCATGGTCGGTT 61.019 55.000 29.44 0.00 0.00 4.44
1857 3547 0.663688 AGAAGATGGATCGTCGGTCG 59.336 55.000 0.00 0.00 39.73 4.79
1858 3548 2.159226 ACAAGAAGATGGATCGTCGGTC 60.159 50.000 0.00 0.00 39.73 4.79
1859 3549 1.825474 ACAAGAAGATGGATCGTCGGT 59.175 47.619 0.00 0.00 39.73 4.69
1860 3550 2.464865 GACAAGAAGATGGATCGTCGG 58.535 52.381 0.00 0.00 39.73 4.79
1861 3551 2.099921 AGGACAAGAAGATGGATCGTCG 59.900 50.000 0.00 0.00 39.73 5.12
1864 3554 5.049818 GCAATTAGGACAAGAAGATGGATCG 60.050 44.000 0.00 0.00 0.00 3.69
1872 3562 4.397417 CAGGGAAGCAATTAGGACAAGAAG 59.603 45.833 0.00 0.00 0.00 2.85
1876 3566 3.806949 ACAGGGAAGCAATTAGGACAA 57.193 42.857 0.00 0.00 0.00 3.18
1973 3675 2.045708 GTGTCCATGATGGCGCCAA 61.046 57.895 36.33 19.92 37.47 4.52
2039 3741 1.434696 CAGCCCGGAATTCATGTGC 59.565 57.895 0.73 2.09 0.00 4.57
2096 3878 4.944372 GTCGCCGCCGTATCCTGG 62.944 72.222 0.00 0.00 35.54 4.45
2179 3961 1.303317 GGTGCCGGAAATGTGAGGT 60.303 57.895 5.05 0.00 0.00 3.85
2182 3964 1.602323 GGTGGTGCCGGAAATGTGA 60.602 57.895 5.05 0.00 0.00 3.58
2247 4030 2.850060 CGCAGTTAAGCAAATGAGCATG 59.150 45.455 0.00 0.00 36.85 4.06
2249 4032 2.617250 CGCAGTTAAGCAAATGAGCA 57.383 45.000 0.00 0.00 36.85 4.26
2254 4037 2.095567 CAGTCTGCGCAGTTAAGCAAAT 60.096 45.455 34.70 12.18 43.31 2.32
2255 4038 1.264020 CAGTCTGCGCAGTTAAGCAAA 59.736 47.619 34.70 12.25 43.31 3.68
2257 4040 0.033366 TCAGTCTGCGCAGTTAAGCA 59.967 50.000 34.70 13.84 41.55 3.91
2258 4041 1.148310 TTCAGTCTGCGCAGTTAAGC 58.852 50.000 34.70 20.25 0.00 3.09
2263 4046 0.877071 CCATTTTCAGTCTGCGCAGT 59.123 50.000 34.70 16.24 0.00 4.40
2264 4047 0.455633 GCCATTTTCAGTCTGCGCAG 60.456 55.000 31.53 31.53 0.00 5.18
2265 4048 1.171549 TGCCATTTTCAGTCTGCGCA 61.172 50.000 10.98 10.98 0.00 6.09
2268 4051 2.053627 CGTTTGCCATTTTCAGTCTGC 58.946 47.619 0.00 0.00 0.00 4.26
2269 4052 3.354089 ACGTTTGCCATTTTCAGTCTG 57.646 42.857 0.00 0.00 0.00 3.51
2270 4053 4.111916 CAAACGTTTGCCATTTTCAGTCT 58.888 39.130 26.55 0.00 0.00 3.24
2271 4054 4.026886 GTCAAACGTTTGCCATTTTCAGTC 60.027 41.667 31.42 3.14 38.05 3.51
2280 5269 1.034838 AGCAGGTCAAACGTTTGCCA 61.035 50.000 34.80 21.52 37.05 4.92
2283 5272 1.533756 CCACAGCAGGTCAAACGTTTG 60.534 52.381 30.63 30.63 39.48 2.93
2289 5278 1.077140 TGCACCACAGCAGGTCAAA 60.077 52.632 0.00 0.00 40.77 2.69
2426 5673 2.887568 GCGACTCCGTGGATGCTG 60.888 66.667 0.00 0.00 38.24 4.41
2428 5675 2.887568 CTGCGACTCCGTGGATGC 60.888 66.667 0.00 0.00 38.24 3.91
2435 5682 3.561213 CATGCAGCTGCGACTCCG 61.561 66.667 32.11 13.45 45.83 4.63
2440 5687 3.436924 CAAGGCATGCAGCTGCGA 61.437 61.111 32.11 21.69 45.83 5.10
2451 5698 1.803922 CGACGATACGTGCAAGGCA 60.804 57.895 4.26 0.00 41.37 4.75
2461 5708 0.713883 CAACTGGCACACGACGATAC 59.286 55.000 0.00 0.00 0.00 2.24
2484 5744 6.094603 AGGAGCAAGCATCTGTATTTAGTTTG 59.905 38.462 0.00 0.00 0.00 2.93
2505 5766 1.001764 TGATGGCCACTGCAAGGAG 60.002 57.895 8.16 0.00 39.30 3.69
2644 5973 6.685527 TTTTATGACAGTGCAAGTACAACA 57.314 33.333 0.00 0.00 0.00 3.33
2896 6232 2.458610 GGTTTACGCCTAGCACCGC 61.459 63.158 0.00 0.00 0.00 5.68
2951 6287 0.174845 CCGTTTAGGCAGATCGGACA 59.825 55.000 0.26 0.00 43.22 4.02
2966 6302 1.808390 GCGCGAGGTGTAATCCGTT 60.808 57.895 12.10 0.00 0.00 4.44
2967 6303 2.202703 GCGCGAGGTGTAATCCGT 60.203 61.111 12.10 0.00 0.00 4.69
2968 6304 2.202690 TGCGCGAGGTGTAATCCG 60.203 61.111 12.10 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.