Multiple sequence alignment - TraesCS5D01G389200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G389200 chr5D 100.000 4277 0 0 1 4277 458629910 458634186 0.000000e+00 7899.0
1 TraesCS5D01G389200 chr5D 85.227 176 24 2 2713 2887 476462519 476462693 3.400000e-41 180.0
2 TraesCS5D01G389200 chr5B 92.681 3375 146 39 816 4139 562046398 562049722 0.000000e+00 4771.0
3 TraesCS5D01G389200 chr5B 90.764 628 42 7 1278 1905 530921489 530922100 0.000000e+00 824.0
4 TraesCS5D01G389200 chr5B 91.572 439 11 10 118 536 562045974 562046406 2.220000e-162 582.0
5 TraesCS5D01G389200 chr5B 88.482 382 32 8 2889 3264 530922093 530922468 6.520000e-123 451.0
6 TraesCS5D01G389200 chr5A 93.315 2498 100 23 816 3281 576582560 576585022 0.000000e+00 3626.0
7 TraesCS5D01G389200 chr5A 85.861 778 45 16 3321 4095 576585026 576585741 0.000000e+00 767.0
8 TraesCS5D01G389200 chr5A 83.410 434 35 16 118 535 576582117 576582529 6.760000e-98 368.0
9 TraesCS5D01G389200 chr2D 93.923 2024 91 13 1278 3295 601057676 601055679 0.000000e+00 3027.0
10 TraesCS5D01G389200 chr2D 87.879 198 14 6 3321 3516 601055685 601055496 1.550000e-54 224.0
11 TraesCS5D01G389200 chr2D 93.151 73 5 0 4136 4208 463882432 463882504 1.630000e-19 108.0
12 TraesCS5D01G389200 chr4A 92.708 2016 119 12 1280 3295 532160580 532162567 0.000000e+00 2883.0
13 TraesCS5D01G389200 chr4A 100.000 279 0 0 537 815 707183726 707183448 2.280000e-142 516.0
14 TraesCS5D01G389200 chr4A 88.462 182 11 6 3321 3500 532162561 532162734 1.200000e-50 211.0
15 TraesCS5D01G389200 chr7D 95.140 1605 66 6 1697 3295 332691734 332693332 0.000000e+00 2521.0
16 TraesCS5D01G389200 chr7D 100.000 281 0 0 535 815 102982038 102982318 1.760000e-143 520.0
17 TraesCS5D01G389200 chr7D 87.616 323 25 2 1278 1600 332691059 332691366 1.130000e-95 361.0
18 TraesCS5D01G389200 chr7D 89.873 79 4 3 4136 4211 416240197 416240120 9.790000e-17 99.0
19 TraesCS5D01G389200 chr2A 91.611 1359 81 16 1278 2636 461411841 461413166 0.000000e+00 1847.0
20 TraesCS5D01G389200 chr2A 89.968 618 50 8 2661 3272 461413372 461413983 0.000000e+00 787.0
21 TraesCS5D01G389200 chr2A 91.250 80 3 3 4136 4211 89486243 89486322 5.850000e-19 106.0
22 TraesCS5D01G389200 chr1B 91.611 1359 81 16 1278 2636 520243732 520245057 0.000000e+00 1847.0
23 TraesCS5D01G389200 chr1B 89.644 618 52 7 2661 3272 520245263 520245874 0.000000e+00 776.0
24 TraesCS5D01G389200 chr1A 91.244 1359 86 16 1278 2636 64843087 64844412 0.000000e+00 1820.0
25 TraesCS5D01G389200 chr1A 89.968 618 50 8 2661 3272 64844618 64845229 0.000000e+00 787.0
26 TraesCS5D01G389200 chr3B 90.519 1002 62 16 1278 2279 568297089 568296121 0.000000e+00 1293.0
27 TraesCS5D01G389200 chr1D 90.476 504 33 6 1278 1781 476219179 476218691 0.000000e+00 651.0
28 TraesCS5D01G389200 chr1D 90.278 504 34 6 1278 1781 467357272 467357760 0.000000e+00 645.0
29 TraesCS5D01G389200 chr6D 100.000 279 0 0 537 815 456205738 456206016 2.280000e-142 516.0
30 TraesCS5D01G389200 chr3D 96.786 280 7 1 537 816 348890824 348891101 2.330000e-127 466.0
31 TraesCS5D01G389200 chr3D 94.139 273 4 1 544 816 16126791 16126531 5.150000e-109 405.0
32 TraesCS5D01G389200 chr2B 94.444 252 12 2 565 815 2124400 2124650 1.870000e-103 387.0
33 TraesCS5D01G389200 chr2B 86.517 89 10 2 4132 4218 376149254 376149166 3.520000e-16 97.1
34 TraesCS5D01G389200 chr6A 91.463 82 3 3 4132 4209 97593994 97593913 4.520000e-20 110.0
35 TraesCS5D01G389200 chr7B 92.308 78 3 1 4133 4207 245982772 245982849 1.630000e-19 108.0
36 TraesCS5D01G389200 chr7B 92.000 75 4 2 4136 4208 156633848 156633922 2.100000e-18 104.0
37 TraesCS5D01G389200 chr6B 93.056 72 4 1 4136 4207 123700644 123700714 2.100000e-18 104.0
38 TraesCS5D01G389200 chr3A 89.286 84 4 3 4129 4207 141041240 141041323 2.720000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G389200 chr5D 458629910 458634186 4276 False 7899.0 7899 100.000000 1 4277 1 chr5D.!!$F1 4276
1 TraesCS5D01G389200 chr5B 562045974 562049722 3748 False 2676.5 4771 92.126500 118 4139 2 chr5B.!!$F2 4021
2 TraesCS5D01G389200 chr5B 530921489 530922468 979 False 637.5 824 89.623000 1278 3264 2 chr5B.!!$F1 1986
3 TraesCS5D01G389200 chr5A 576582117 576585741 3624 False 1587.0 3626 87.528667 118 4095 3 chr5A.!!$F1 3977
4 TraesCS5D01G389200 chr2D 601055496 601057676 2180 True 1625.5 3027 90.901000 1278 3516 2 chr2D.!!$R1 2238
5 TraesCS5D01G389200 chr4A 532160580 532162734 2154 False 1547.0 2883 90.585000 1280 3500 2 chr4A.!!$F1 2220
6 TraesCS5D01G389200 chr7D 332691059 332693332 2273 False 1441.0 2521 91.378000 1278 3295 2 chr7D.!!$F2 2017
7 TraesCS5D01G389200 chr2A 461411841 461413983 2142 False 1317.0 1847 90.789500 1278 3272 2 chr2A.!!$F2 1994
8 TraesCS5D01G389200 chr1B 520243732 520245874 2142 False 1311.5 1847 90.627500 1278 3272 2 chr1B.!!$F1 1994
9 TraesCS5D01G389200 chr1A 64843087 64845229 2142 False 1303.5 1820 90.606000 1278 3272 2 chr1A.!!$F1 1994
10 TraesCS5D01G389200 chr3B 568296121 568297089 968 True 1293.0 1293 90.519000 1278 2279 1 chr3B.!!$R1 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.036388 TCTCATTTTCTCGGCGCCTT 60.036 50.0 26.68 0.0 0.00 4.35 F
698 729 0.108138 AGAACAGTGCATCCCGCTAC 60.108 55.0 0.00 0.0 43.06 3.58 F
778 809 0.179000 CCTGGGACACTGTAGCATCC 59.821 60.0 0.00 0.0 0.00 3.51 F
1077 1152 0.626382 TCCAGTGTCTCCTCTCCGAT 59.374 55.0 0.00 0.0 0.00 4.18 F
2669 3243 0.110823 GAATGCGCGTTTGTCGAGTT 60.111 50.0 17.37 0.0 42.86 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1345 0.393077 ACAGAAAGGACACACGAGGG 59.607 55.000 0.00 0.0 0.00 4.30 R
2380 2773 0.807667 CTTCCTCCTCGGTGATTGCG 60.808 60.000 0.00 0.0 0.00 4.85 R
2669 3243 4.892965 AGCCGGCAACCAACTGCA 62.893 61.111 31.54 0.0 44.52 4.41 R
3028 3616 3.817787 CATGCCGTCCATGTCCAG 58.182 61.111 5.42 0.0 45.05 3.86 R
3735 4327 0.317436 TTCGAAACAACACGGCATGC 60.317 50.000 9.90 9.9 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.699671 GTGCCAAAACACAACCGC 58.300 55.556 0.00 0.00 40.40 5.68
18 19 1.880796 GTGCCAAAACACAACCGCC 60.881 57.895 0.00 0.00 40.40 6.13
19 20 2.656973 GCCAAAACACAACCGCCG 60.657 61.111 0.00 0.00 0.00 6.46
20 21 3.111939 CCAAAACACAACCGCCGA 58.888 55.556 0.00 0.00 0.00 5.54
21 22 1.008995 CCAAAACACAACCGCCGAG 60.009 57.895 0.00 0.00 0.00 4.63
23 24 2.190841 AAAACACAACCGCCGAGGG 61.191 57.895 2.11 0.00 46.96 4.30
39 40 3.512516 GGCAAGAGCGTGGCCATC 61.513 66.667 9.72 1.70 46.92 3.51
40 41 2.437359 GCAAGAGCGTGGCCATCT 60.437 61.111 9.72 9.82 0.00 2.90
41 42 2.467826 GCAAGAGCGTGGCCATCTC 61.468 63.158 23.07 23.07 0.00 2.75
42 43 1.078918 CAAGAGCGTGGCCATCTCA 60.079 57.895 28.59 0.00 0.00 3.27
43 44 0.463295 CAAGAGCGTGGCCATCTCAT 60.463 55.000 28.59 19.74 0.00 2.90
44 45 0.254178 AAGAGCGTGGCCATCTCATT 59.746 50.000 28.59 20.02 0.00 2.57
45 46 0.254178 AGAGCGTGGCCATCTCATTT 59.746 50.000 28.59 13.59 0.00 2.32
46 47 1.098050 GAGCGTGGCCATCTCATTTT 58.902 50.000 24.65 2.07 0.00 1.82
47 48 1.064654 GAGCGTGGCCATCTCATTTTC 59.935 52.381 24.65 3.99 0.00 2.29
48 49 1.098050 GCGTGGCCATCTCATTTTCT 58.902 50.000 9.72 0.00 0.00 2.52
49 50 1.064654 GCGTGGCCATCTCATTTTCTC 59.935 52.381 9.72 0.00 0.00 2.87
50 51 1.328680 CGTGGCCATCTCATTTTCTCG 59.671 52.381 9.72 0.00 0.00 4.04
51 52 1.672881 GTGGCCATCTCATTTTCTCGG 59.327 52.381 9.72 0.00 0.00 4.63
52 53 0.665298 GGCCATCTCATTTTCTCGGC 59.335 55.000 0.00 0.00 37.33 5.54
53 54 0.305922 GCCATCTCATTTTCTCGGCG 59.694 55.000 0.00 0.00 0.00 6.46
54 55 0.305922 CCATCTCATTTTCTCGGCGC 59.694 55.000 0.00 0.00 0.00 6.53
55 56 0.305922 CATCTCATTTTCTCGGCGCC 59.694 55.000 19.07 19.07 0.00 6.53
56 57 0.179000 ATCTCATTTTCTCGGCGCCT 59.821 50.000 26.68 0.00 0.00 5.52
57 58 0.036388 TCTCATTTTCTCGGCGCCTT 60.036 50.000 26.68 0.00 0.00 4.35
58 59 0.804989 CTCATTTTCTCGGCGCCTTT 59.195 50.000 26.68 0.00 0.00 3.11
59 60 0.802494 TCATTTTCTCGGCGCCTTTC 59.198 50.000 26.68 0.00 0.00 2.62
60 61 0.179163 CATTTTCTCGGCGCCTTTCC 60.179 55.000 26.68 0.00 0.00 3.13
61 62 1.313091 ATTTTCTCGGCGCCTTTCCC 61.313 55.000 26.68 0.00 0.00 3.97
62 63 2.684192 TTTTCTCGGCGCCTTTCCCA 62.684 55.000 26.68 0.85 0.00 4.37
63 64 2.478335 TTTCTCGGCGCCTTTCCCAT 62.478 55.000 26.68 0.00 0.00 4.00
64 65 2.438434 CTCGGCGCCTTTCCCATT 60.438 61.111 26.68 0.00 0.00 3.16
65 66 2.034999 TCGGCGCCTTTCCCATTT 59.965 55.556 26.68 0.00 0.00 2.32
66 67 1.993369 CTCGGCGCCTTTCCCATTTC 61.993 60.000 26.68 0.00 0.00 2.17
67 68 2.339556 CGGCGCCTTTCCCATTTCA 61.340 57.895 26.68 0.00 0.00 2.69
68 69 1.215382 GGCGCCTTTCCCATTTCAC 59.785 57.895 22.15 0.00 0.00 3.18
69 70 1.154035 GCGCCTTTCCCATTTCACG 60.154 57.895 0.00 0.00 0.00 4.35
70 71 1.582610 GCGCCTTTCCCATTTCACGA 61.583 55.000 0.00 0.00 0.00 4.35
71 72 0.878416 CGCCTTTCCCATTTCACGAA 59.122 50.000 0.00 0.00 0.00 3.85
72 73 1.135689 CGCCTTTCCCATTTCACGAAG 60.136 52.381 0.00 0.00 0.00 3.79
73 74 2.159382 GCCTTTCCCATTTCACGAAGA 58.841 47.619 0.00 0.00 0.00 2.87
74 75 2.162408 GCCTTTCCCATTTCACGAAGAG 59.838 50.000 0.00 0.00 0.00 2.85
75 76 3.674997 CCTTTCCCATTTCACGAAGAGA 58.325 45.455 0.00 0.00 0.00 3.10
76 77 4.072131 CCTTTCCCATTTCACGAAGAGAA 58.928 43.478 0.00 0.00 34.85 2.87
77 78 4.154918 CCTTTCCCATTTCACGAAGAGAAG 59.845 45.833 0.00 0.00 38.51 2.85
78 79 4.617253 TTCCCATTTCACGAAGAGAAGA 57.383 40.909 0.00 0.00 38.51 2.87
79 80 4.617253 TCCCATTTCACGAAGAGAAGAA 57.383 40.909 0.00 0.00 38.51 2.52
80 81 4.968259 TCCCATTTCACGAAGAGAAGAAA 58.032 39.130 0.00 0.00 38.51 2.52
81 82 5.373222 TCCCATTTCACGAAGAGAAGAAAA 58.627 37.500 0.00 0.00 38.51 2.29
82 83 5.470098 TCCCATTTCACGAAGAGAAGAAAAG 59.530 40.000 0.00 0.00 38.51 2.27
83 84 5.335191 CCCATTTCACGAAGAGAAGAAAAGG 60.335 44.000 0.00 0.00 38.51 3.11
84 85 5.335191 CCATTTCACGAAGAGAAGAAAAGGG 60.335 44.000 0.00 0.00 38.51 3.95
85 86 2.767505 TCACGAAGAGAAGAAAAGGGC 58.232 47.619 0.00 0.00 0.00 5.19
86 87 2.104111 TCACGAAGAGAAGAAAAGGGCA 59.896 45.455 0.00 0.00 0.00 5.36
87 88 2.481952 CACGAAGAGAAGAAAAGGGCAG 59.518 50.000 0.00 0.00 0.00 4.85
88 89 2.079925 CGAAGAGAAGAAAAGGGCAGG 58.920 52.381 0.00 0.00 0.00 4.85
89 90 2.289694 CGAAGAGAAGAAAAGGGCAGGA 60.290 50.000 0.00 0.00 0.00 3.86
90 91 3.620966 CGAAGAGAAGAAAAGGGCAGGAT 60.621 47.826 0.00 0.00 0.00 3.24
91 92 4.339748 GAAGAGAAGAAAAGGGCAGGATT 58.660 43.478 0.00 0.00 0.00 3.01
92 93 4.394797 AGAGAAGAAAAGGGCAGGATTT 57.605 40.909 0.00 0.00 0.00 2.17
93 94 4.745351 AGAGAAGAAAAGGGCAGGATTTT 58.255 39.130 0.00 0.00 0.00 1.82
94 95 4.769488 AGAGAAGAAAAGGGCAGGATTTTC 59.231 41.667 2.91 2.91 42.88 2.29
95 96 3.834813 AGAAGAAAAGGGCAGGATTTTCC 59.165 43.478 6.75 0.00 43.34 3.13
97 98 3.435275 AGAAAAGGGCAGGATTTTCCTC 58.565 45.455 6.75 0.00 45.66 3.71
98 99 2.238084 AAAGGGCAGGATTTTCCTCC 57.762 50.000 0.00 0.00 45.66 4.30
99 100 0.336392 AAGGGCAGGATTTTCCTCCC 59.664 55.000 16.94 16.94 45.66 4.30
100 101 4.686695 GGCAGGATTTTCCTCCCC 57.313 61.111 0.00 0.00 45.66 4.81
101 102 1.075970 GGCAGGATTTTCCTCCCCC 60.076 63.158 0.00 0.00 45.66 5.40
102 103 1.697297 GCAGGATTTTCCTCCCCCA 59.303 57.895 0.00 0.00 45.66 4.96
103 104 0.262876 GCAGGATTTTCCTCCCCCAT 59.737 55.000 0.00 0.00 45.66 4.00
104 105 1.343377 GCAGGATTTTCCTCCCCCATT 60.343 52.381 0.00 0.00 45.66 3.16
105 106 2.894007 GCAGGATTTTCCTCCCCCATTT 60.894 50.000 0.00 0.00 45.66 2.32
106 107 3.033909 CAGGATTTTCCTCCCCCATTTC 58.966 50.000 0.00 0.00 45.66 2.17
107 108 2.023015 AGGATTTTCCTCCCCCATTTCC 60.023 50.000 0.00 0.00 45.66 3.13
108 109 2.023015 GGATTTTCCTCCCCCATTTCCT 60.023 50.000 0.00 0.00 32.53 3.36
109 110 3.568780 GGATTTTCCTCCCCCATTTCCTT 60.569 47.826 0.00 0.00 32.53 3.36
110 111 3.646867 TTTTCCTCCCCCATTTCCTTT 57.353 42.857 0.00 0.00 0.00 3.11
111 112 3.646867 TTTCCTCCCCCATTTCCTTTT 57.353 42.857 0.00 0.00 0.00 2.27
112 113 2.919772 TCCTCCCCCATTTCCTTTTC 57.080 50.000 0.00 0.00 0.00 2.29
113 114 2.077803 TCCTCCCCCATTTCCTTTTCA 58.922 47.619 0.00 0.00 0.00 2.69
114 115 2.179427 CCTCCCCCATTTCCTTTTCAC 58.821 52.381 0.00 0.00 0.00 3.18
115 116 2.179427 CTCCCCCATTTCCTTTTCACC 58.821 52.381 0.00 0.00 0.00 4.02
116 117 1.203250 TCCCCCATTTCCTTTTCACCC 60.203 52.381 0.00 0.00 0.00 4.61
139 140 2.874086 CCTTTGCTTTTGCCCTTTTCTG 59.126 45.455 0.00 0.00 46.87 3.02
140 141 3.534554 CTTTGCTTTTGCCCTTTTCTGT 58.465 40.909 0.00 0.00 46.87 3.41
141 142 3.625649 TTGCTTTTGCCCTTTTCTGTT 57.374 38.095 0.00 0.00 46.87 3.16
142 143 3.625649 TGCTTTTGCCCTTTTCTGTTT 57.374 38.095 0.00 0.00 46.87 2.83
143 144 3.530535 TGCTTTTGCCCTTTTCTGTTTC 58.469 40.909 0.00 0.00 46.87 2.78
144 145 3.197549 TGCTTTTGCCCTTTTCTGTTTCT 59.802 39.130 0.00 0.00 46.87 2.52
148 149 2.316108 TGCCCTTTTCTGTTTCTTCCC 58.684 47.619 0.00 0.00 0.00 3.97
169 170 2.562298 CTGCCAAAATCCAAAGCCTACA 59.438 45.455 0.00 0.00 0.00 2.74
288 297 2.273179 GCCCTCCCGTGAAAAACCC 61.273 63.158 0.00 0.00 0.00 4.11
389 413 0.812811 CACACGCCTCATCCATCCAG 60.813 60.000 0.00 0.00 0.00 3.86
391 415 2.664185 CGCCTCATCCATCCAGCG 60.664 66.667 0.00 0.00 37.39 5.18
395 419 0.178767 CCTCATCCATCCAGCGAACA 59.821 55.000 0.00 0.00 0.00 3.18
397 421 1.938577 CTCATCCATCCAGCGAACAAG 59.061 52.381 0.00 0.00 0.00 3.16
400 424 3.055458 TCATCCATCCAGCGAACAAGTTA 60.055 43.478 0.00 0.00 0.00 2.24
402 426 1.398390 CCATCCAGCGAACAAGTTAGC 59.602 52.381 9.58 9.58 40.72 3.09
406 430 1.195448 CCAGCGAACAAGTTAGCACAG 59.805 52.381 17.90 8.75 42.45 3.66
409 439 3.057734 AGCGAACAAGTTAGCACAGTAC 58.942 45.455 17.90 0.00 42.45 2.73
416 447 4.989168 ACAAGTTAGCACAGTACTAAGCAC 59.011 41.667 17.79 10.02 30.48 4.40
527 558 3.771491 CGCGCTGCTGACACTGTC 61.771 66.667 5.56 1.86 0.00 3.51
528 559 2.662857 GCGCTGCTGACACTGTCA 60.663 61.111 11.44 11.44 40.50 3.58
529 560 2.947890 GCGCTGCTGACACTGTCAC 61.948 63.158 7.84 6.34 37.67 3.67
530 561 2.313172 CGCTGCTGACACTGTCACC 61.313 63.158 7.84 2.71 37.67 4.02
531 562 2.313172 GCTGCTGACACTGTCACCG 61.313 63.158 7.84 1.17 37.67 4.94
532 563 1.665916 CTGCTGACACTGTCACCGG 60.666 63.158 7.84 0.00 37.67 5.28
533 564 2.087462 CTGCTGACACTGTCACCGGA 62.087 60.000 9.46 0.52 37.67 5.14
534 565 1.069090 GCTGACACTGTCACCGGAA 59.931 57.895 9.46 0.00 37.67 4.30
535 566 0.946221 GCTGACACTGTCACCGGAAG 60.946 60.000 9.46 0.00 37.67 3.46
552 583 3.218227 GGGAACCGGCTCCTCTAC 58.782 66.667 22.93 2.96 40.86 2.59
553 584 2.433146 GGGAACCGGCTCCTCTACC 61.433 68.421 22.93 2.57 40.86 3.18
558 589 2.439701 CGGCTCCTCTACCGTCCA 60.440 66.667 0.00 0.00 44.46 4.02
559 590 2.482333 CGGCTCCTCTACCGTCCAG 61.482 68.421 0.00 0.00 44.46 3.86
560 591 1.380112 GGCTCCTCTACCGTCCAGT 60.380 63.158 0.00 0.00 0.00 4.00
561 592 1.668101 GGCTCCTCTACCGTCCAGTG 61.668 65.000 0.00 0.00 0.00 3.66
562 593 0.680280 GCTCCTCTACCGTCCAGTGA 60.680 60.000 0.00 0.00 0.00 3.41
563 594 1.384525 CTCCTCTACCGTCCAGTGAG 58.615 60.000 0.00 0.00 0.00 3.51
564 595 0.680280 TCCTCTACCGTCCAGTGAGC 60.680 60.000 0.00 0.00 0.00 4.26
565 596 0.965866 CCTCTACCGTCCAGTGAGCA 60.966 60.000 0.00 0.00 0.00 4.26
566 597 0.171455 CTCTACCGTCCAGTGAGCAC 59.829 60.000 0.00 0.00 0.00 4.40
567 598 1.154016 CTACCGTCCAGTGAGCACG 60.154 63.158 0.00 0.00 36.20 5.34
569 600 3.991051 CCGTCCAGTGAGCACGGT 61.991 66.667 16.09 0.00 38.94 4.83
570 601 2.632544 CCGTCCAGTGAGCACGGTA 61.633 63.158 16.09 0.00 38.94 4.02
571 602 1.154016 CGTCCAGTGAGCACGGTAG 60.154 63.158 0.00 4.26 36.20 3.18
572 603 1.215647 GTCCAGTGAGCACGGTAGG 59.784 63.158 0.00 5.27 36.20 3.18
573 604 1.982395 TCCAGTGAGCACGGTAGGG 60.982 63.158 0.00 3.08 36.20 3.53
574 605 1.982395 CCAGTGAGCACGGTAGGGA 60.982 63.158 0.00 0.00 36.20 4.20
575 606 1.330655 CCAGTGAGCACGGTAGGGAT 61.331 60.000 0.00 0.00 36.20 3.85
576 607 0.179100 CAGTGAGCACGGTAGGGATG 60.179 60.000 0.00 0.00 36.20 3.51
577 608 1.521681 GTGAGCACGGTAGGGATGC 60.522 63.158 0.00 0.00 39.74 3.91
580 611 4.752514 GCACGGTAGGGATGCTAC 57.247 61.111 0.00 0.00 36.40 3.58
581 612 1.820581 GCACGGTAGGGATGCTACA 59.179 57.895 0.00 0.00 36.40 2.74
582 613 0.249489 GCACGGTAGGGATGCTACAG 60.249 60.000 0.00 0.00 36.40 2.74
583 614 0.389391 CACGGTAGGGATGCTACAGG 59.611 60.000 0.00 0.00 0.00 4.00
584 615 0.260816 ACGGTAGGGATGCTACAGGA 59.739 55.000 0.00 0.00 0.00 3.86
585 616 0.962489 CGGTAGGGATGCTACAGGAG 59.038 60.000 0.00 0.00 0.00 3.69
593 624 2.993853 GCTACAGGAGCCTGCCTT 59.006 61.111 16.20 0.05 46.41 4.35
594 625 1.301293 GCTACAGGAGCCTGCCTTT 59.699 57.895 16.20 0.00 46.41 3.11
595 626 1.028868 GCTACAGGAGCCTGCCTTTG 61.029 60.000 16.20 3.96 46.41 2.77
597 628 2.362120 CAGGAGCCTGCCTTTGGG 60.362 66.667 3.18 0.00 35.66 4.12
609 640 2.653234 CCTTTGGGCATCTATCAGCT 57.347 50.000 0.00 0.00 0.00 4.24
610 641 2.228059 CCTTTGGGCATCTATCAGCTG 58.772 52.381 7.63 7.63 0.00 4.24
611 642 2.422519 CCTTTGGGCATCTATCAGCTGT 60.423 50.000 14.67 3.75 0.00 4.40
612 643 2.627515 TTGGGCATCTATCAGCTGTC 57.372 50.000 14.67 0.00 0.00 3.51
613 644 1.499368 TGGGCATCTATCAGCTGTCA 58.501 50.000 14.67 1.52 0.00 3.58
614 645 1.415289 TGGGCATCTATCAGCTGTCAG 59.585 52.381 14.67 11.92 0.00 3.51
615 646 1.690893 GGGCATCTATCAGCTGTCAGA 59.309 52.381 14.67 16.77 0.00 3.27
616 647 2.302445 GGGCATCTATCAGCTGTCAGAT 59.698 50.000 20.24 20.24 0.00 2.90
617 648 3.327626 GGCATCTATCAGCTGTCAGATG 58.672 50.000 32.98 32.98 44.67 2.90
618 649 3.244146 GGCATCTATCAGCTGTCAGATGT 60.244 47.826 34.64 17.80 44.04 3.06
619 650 4.021632 GGCATCTATCAGCTGTCAGATGTA 60.022 45.833 34.64 13.59 44.04 2.29
620 651 5.162794 GCATCTATCAGCTGTCAGATGTAG 58.837 45.833 34.64 23.08 44.04 2.74
621 652 5.278907 GCATCTATCAGCTGTCAGATGTAGT 60.279 44.000 34.64 16.83 44.04 2.73
622 653 6.072230 GCATCTATCAGCTGTCAGATGTAGTA 60.072 42.308 34.64 12.03 44.04 1.82
623 654 7.362834 GCATCTATCAGCTGTCAGATGTAGTAT 60.363 40.741 34.64 16.70 44.04 2.12
624 655 9.171877 CATCTATCAGCTGTCAGATGTAGTATA 57.828 37.037 31.05 13.94 39.57 1.47
625 656 9.746457 ATCTATCAGCTGTCAGATGTAGTATAA 57.254 33.333 23.26 0.00 32.57 0.98
626 657 9.574516 TCTATCAGCTGTCAGATGTAGTATAAA 57.425 33.333 17.27 0.00 32.57 1.40
627 658 9.619316 CTATCAGCTGTCAGATGTAGTATAAAC 57.381 37.037 17.27 0.00 32.57 2.01
628 659 6.495706 TCAGCTGTCAGATGTAGTATAAACG 58.504 40.000 17.27 0.00 32.57 3.60
629 660 5.687730 CAGCTGTCAGATGTAGTATAAACGG 59.312 44.000 10.02 0.00 0.00 4.44
630 661 4.444720 GCTGTCAGATGTAGTATAAACGGC 59.555 45.833 3.32 0.00 0.00 5.68
631 662 5.736492 GCTGTCAGATGTAGTATAAACGGCT 60.736 44.000 3.32 0.00 35.44 5.52
632 663 5.828747 TGTCAGATGTAGTATAAACGGCTC 58.171 41.667 0.00 0.00 0.00 4.70
633 664 5.358725 TGTCAGATGTAGTATAAACGGCTCA 59.641 40.000 0.00 0.00 0.00 4.26
634 665 5.915758 GTCAGATGTAGTATAAACGGCTCAG 59.084 44.000 0.00 0.00 0.00 3.35
635 666 5.826208 TCAGATGTAGTATAAACGGCTCAGA 59.174 40.000 0.00 0.00 0.00 3.27
636 667 6.490381 TCAGATGTAGTATAAACGGCTCAGAT 59.510 38.462 0.00 0.00 0.00 2.90
637 668 6.804295 CAGATGTAGTATAAACGGCTCAGATC 59.196 42.308 0.00 0.00 0.00 2.75
638 669 6.490381 AGATGTAGTATAAACGGCTCAGATCA 59.510 38.462 0.00 0.00 0.00 2.92
639 670 5.828747 TGTAGTATAAACGGCTCAGATCAC 58.171 41.667 0.00 0.00 0.00 3.06
640 671 5.593095 TGTAGTATAAACGGCTCAGATCACT 59.407 40.000 0.00 0.00 0.00 3.41
641 672 5.599999 AGTATAAACGGCTCAGATCACTT 57.400 39.130 0.00 0.00 0.00 3.16
642 673 5.978814 AGTATAAACGGCTCAGATCACTTT 58.021 37.500 0.00 0.00 0.00 2.66
643 674 5.812642 AGTATAAACGGCTCAGATCACTTTG 59.187 40.000 0.00 0.00 0.00 2.77
644 675 1.160137 AACGGCTCAGATCACTTTGC 58.840 50.000 0.00 0.00 0.00 3.68
645 676 0.322975 ACGGCTCAGATCACTTTGCT 59.677 50.000 0.00 0.00 0.00 3.91
646 677 1.550524 ACGGCTCAGATCACTTTGCTA 59.449 47.619 0.00 0.00 0.00 3.49
647 678 1.929836 CGGCTCAGATCACTTTGCTAC 59.070 52.381 0.00 0.00 0.00 3.58
648 679 2.675032 CGGCTCAGATCACTTTGCTACA 60.675 50.000 0.00 0.00 0.00 2.74
649 680 2.935201 GGCTCAGATCACTTTGCTACAG 59.065 50.000 0.00 0.00 0.00 2.74
650 681 3.594134 GCTCAGATCACTTTGCTACAGT 58.406 45.455 0.00 0.00 0.00 3.55
651 682 4.382040 GGCTCAGATCACTTTGCTACAGTA 60.382 45.833 0.00 0.00 0.00 2.74
652 683 4.564769 GCTCAGATCACTTTGCTACAGTAC 59.435 45.833 0.00 0.00 0.00 2.73
653 684 5.714047 CTCAGATCACTTTGCTACAGTACA 58.286 41.667 0.00 0.00 0.00 2.90
654 685 6.286240 TCAGATCACTTTGCTACAGTACAT 57.714 37.500 0.00 0.00 0.00 2.29
655 686 7.404671 TCAGATCACTTTGCTACAGTACATA 57.595 36.000 0.00 0.00 0.00 2.29
656 687 7.836842 TCAGATCACTTTGCTACAGTACATAA 58.163 34.615 0.00 0.00 0.00 1.90
657 688 8.311109 TCAGATCACTTTGCTACAGTACATAAA 58.689 33.333 0.00 0.00 0.00 1.40
658 689 8.383619 CAGATCACTTTGCTACAGTACATAAAC 58.616 37.037 0.00 0.00 0.00 2.01
659 690 8.094548 AGATCACTTTGCTACAGTACATAAACA 58.905 33.333 0.00 0.00 0.00 2.83
660 691 7.652300 TCACTTTGCTACAGTACATAAACAG 57.348 36.000 0.00 0.00 0.00 3.16
661 692 7.214381 TCACTTTGCTACAGTACATAAACAGT 58.786 34.615 0.00 0.00 0.00 3.55
662 693 7.170828 TCACTTTGCTACAGTACATAAACAGTG 59.829 37.037 0.00 0.00 0.00 3.66
663 694 5.856126 TTGCTACAGTACATAAACAGTGC 57.144 39.130 0.00 0.00 0.00 4.40
664 695 3.924073 TGCTACAGTACATAAACAGTGCG 59.076 43.478 0.00 0.00 0.00 5.34
665 696 3.241995 GCTACAGTACATAAACAGTGCGC 60.242 47.826 0.00 0.00 0.00 6.09
666 697 2.761559 ACAGTACATAAACAGTGCGCA 58.238 42.857 5.66 5.66 0.00 6.09
667 698 3.334691 ACAGTACATAAACAGTGCGCAT 58.665 40.909 15.91 0.00 0.00 4.73
668 699 3.125146 ACAGTACATAAACAGTGCGCATG 59.875 43.478 15.91 15.54 0.00 4.06
669 700 2.095853 AGTACATAAACAGTGCGCATGC 59.904 45.455 15.91 7.91 43.20 4.06
670 701 1.167851 ACATAAACAGTGCGCATGCT 58.832 45.000 15.91 3.36 43.34 3.79
671 702 2.355197 ACATAAACAGTGCGCATGCTA 58.645 42.857 15.91 8.71 43.34 3.49
672 703 2.095853 ACATAAACAGTGCGCATGCTAC 59.904 45.455 15.91 14.43 43.34 3.58
673 704 1.802069 TAAACAGTGCGCATGCTACA 58.198 45.000 15.91 11.22 43.34 2.74
674 705 0.518636 AAACAGTGCGCATGCTACAG 59.481 50.000 15.91 13.50 43.34 2.74
675 706 1.300971 AACAGTGCGCATGCTACAGG 61.301 55.000 15.91 12.67 43.34 4.00
676 707 1.448365 CAGTGCGCATGCTACAGGA 60.448 57.895 15.91 0.00 43.34 3.86
677 708 1.448540 AGTGCGCATGCTACAGGAC 60.449 57.895 15.91 11.34 43.34 3.85
678 709 2.509111 TGCGCATGCTACAGGACG 60.509 61.111 17.13 0.00 43.34 4.79
679 710 2.202743 GCGCATGCTACAGGACGA 60.203 61.111 17.13 0.00 38.39 4.20
680 711 2.233654 GCGCATGCTACAGGACGAG 61.234 63.158 17.13 0.00 38.39 4.18
681 712 1.433471 CGCATGCTACAGGACGAGA 59.567 57.895 17.13 0.00 0.00 4.04
682 713 0.179137 CGCATGCTACAGGACGAGAA 60.179 55.000 17.13 0.00 0.00 2.87
683 714 1.281899 GCATGCTACAGGACGAGAAC 58.718 55.000 11.37 0.00 0.00 3.01
684 715 1.404181 GCATGCTACAGGACGAGAACA 60.404 52.381 11.37 0.00 0.00 3.18
685 716 2.534298 CATGCTACAGGACGAGAACAG 58.466 52.381 0.00 0.00 0.00 3.16
686 717 1.617322 TGCTACAGGACGAGAACAGT 58.383 50.000 0.00 0.00 0.00 3.55
687 718 1.269723 TGCTACAGGACGAGAACAGTG 59.730 52.381 0.00 0.00 0.00 3.66
688 719 1.983972 CTACAGGACGAGAACAGTGC 58.016 55.000 0.00 0.00 0.00 4.40
689 720 1.269723 CTACAGGACGAGAACAGTGCA 59.730 52.381 0.00 0.00 32.12 4.57
690 721 0.681733 ACAGGACGAGAACAGTGCAT 59.318 50.000 0.00 0.00 32.12 3.96
691 722 1.337260 ACAGGACGAGAACAGTGCATC 60.337 52.381 0.00 0.00 32.12 3.91
692 723 0.247736 AGGACGAGAACAGTGCATCC 59.752 55.000 0.00 0.00 32.12 3.51
693 724 0.741221 GGACGAGAACAGTGCATCCC 60.741 60.000 0.00 0.00 0.00 3.85
694 725 1.078759 GACGAGAACAGTGCATCCCG 61.079 60.000 0.00 0.00 0.00 5.14
695 726 2.456119 CGAGAACAGTGCATCCCGC 61.456 63.158 0.00 0.00 42.89 6.13
696 727 1.078848 GAGAACAGTGCATCCCGCT 60.079 57.895 0.00 0.00 43.06 5.52
697 728 0.175760 GAGAACAGTGCATCCCGCTA 59.824 55.000 0.00 0.00 43.06 4.26
698 729 0.108138 AGAACAGTGCATCCCGCTAC 60.108 55.000 0.00 0.00 43.06 3.58
699 730 0.391130 GAACAGTGCATCCCGCTACA 60.391 55.000 0.00 0.00 43.06 2.74
700 731 0.391661 AACAGTGCATCCCGCTACAG 60.392 55.000 0.00 0.00 43.06 2.74
701 732 1.219124 CAGTGCATCCCGCTACAGT 59.781 57.895 0.00 0.00 43.06 3.55
702 733 1.086067 CAGTGCATCCCGCTACAGTG 61.086 60.000 0.00 0.00 43.06 3.66
703 734 2.125147 TGCATCCCGCTACAGTGC 60.125 61.111 0.00 0.00 43.06 4.40
704 735 2.125147 GCATCCCGCTACAGTGCA 60.125 61.111 0.00 0.00 37.77 4.57
705 736 2.176273 GCATCCCGCTACAGTGCAG 61.176 63.158 0.00 0.00 37.77 4.41
706 737 1.522355 CATCCCGCTACAGTGCAGG 60.522 63.158 0.00 0.00 32.06 4.85
707 738 2.735772 ATCCCGCTACAGTGCAGGG 61.736 63.158 0.37 0.37 43.23 4.45
708 739 3.390521 CCCGCTACAGTGCAGGGA 61.391 66.667 8.95 0.00 43.97 4.20
709 740 2.662596 CCGCTACAGTGCAGGGAA 59.337 61.111 8.95 0.00 0.00 3.97
710 741 1.003839 CCGCTACAGTGCAGGGAAA 60.004 57.895 8.95 0.00 0.00 3.13
711 742 1.298859 CCGCTACAGTGCAGGGAAAC 61.299 60.000 8.95 0.00 0.00 2.78
712 743 0.602638 CGCTACAGTGCAGGGAAACA 60.603 55.000 1.11 0.00 0.00 2.83
713 744 1.160137 GCTACAGTGCAGGGAAACAG 58.840 55.000 0.00 0.00 0.00 3.16
714 745 1.543429 GCTACAGTGCAGGGAAACAGT 60.543 52.381 0.00 0.00 0.00 3.55
715 746 2.146342 CTACAGTGCAGGGAAACAGTG 58.854 52.381 0.00 0.00 41.91 3.66
716 747 0.255890 ACAGTGCAGGGAAACAGTGT 59.744 50.000 0.00 0.00 43.79 3.55
717 748 1.340991 ACAGTGCAGGGAAACAGTGTT 60.341 47.619 1.64 1.64 45.78 3.32
718 749 1.334869 CAGTGCAGGGAAACAGTGTTC 59.665 52.381 9.40 3.10 33.45 3.18
719 750 0.307760 GTGCAGGGAAACAGTGTTCG 59.692 55.000 9.40 0.00 0.00 3.95
720 751 0.817634 TGCAGGGAAACAGTGTTCGG 60.818 55.000 9.40 0.00 0.00 4.30
721 752 0.818040 GCAGGGAAACAGTGTTCGGT 60.818 55.000 9.40 0.00 0.00 4.69
722 753 1.675552 CAGGGAAACAGTGTTCGGTT 58.324 50.000 9.40 0.00 33.77 4.44
723 754 2.841215 CAGGGAAACAGTGTTCGGTTA 58.159 47.619 9.40 0.00 32.24 2.85
724 755 2.546789 CAGGGAAACAGTGTTCGGTTAC 59.453 50.000 9.40 0.00 32.24 2.50
725 756 2.171027 AGGGAAACAGTGTTCGGTTACA 59.829 45.455 9.40 0.00 32.24 2.41
726 757 2.546789 GGGAAACAGTGTTCGGTTACAG 59.453 50.000 9.40 0.00 32.24 2.74
727 758 3.200483 GGAAACAGTGTTCGGTTACAGT 58.800 45.455 9.40 0.00 32.24 3.55
730 761 1.577468 CAGTGTTCGGTTACAGTGCA 58.423 50.000 7.71 0.00 41.17 4.57
731 762 1.260561 CAGTGTTCGGTTACAGTGCAC 59.739 52.381 9.40 9.40 41.17 4.57
732 763 1.134640 AGTGTTCGGTTACAGTGCACA 60.135 47.619 21.04 0.00 30.68 4.57
733 764 1.004292 GTGTTCGGTTACAGTGCACAC 60.004 52.381 21.04 8.13 0.00 3.82
734 765 1.134640 TGTTCGGTTACAGTGCACACT 60.135 47.619 21.04 5.51 43.61 3.55
746 777 2.281070 CACACTGCCGTGCCTTCT 60.281 61.111 8.32 0.00 45.10 2.85
747 778 2.281070 ACACTGCCGTGCCTTCTG 60.281 61.111 8.32 0.00 45.10 3.02
748 779 2.281070 CACTGCCGTGCCTTCTGT 60.281 61.111 0.00 0.00 33.82 3.41
749 780 1.893808 CACTGCCGTGCCTTCTGTT 60.894 57.895 0.00 0.00 33.82 3.16
750 781 1.152963 ACTGCCGTGCCTTCTGTTT 60.153 52.632 0.00 0.00 0.00 2.83
751 782 0.751643 ACTGCCGTGCCTTCTGTTTT 60.752 50.000 0.00 0.00 0.00 2.43
752 783 0.385390 CTGCCGTGCCTTCTGTTTTT 59.615 50.000 0.00 0.00 0.00 1.94
753 784 1.606668 CTGCCGTGCCTTCTGTTTTTA 59.393 47.619 0.00 0.00 0.00 1.52
754 785 1.335496 TGCCGTGCCTTCTGTTTTTAC 59.665 47.619 0.00 0.00 0.00 2.01
755 786 1.335597 GCCGTGCCTTCTGTTTTTACC 60.336 52.381 0.00 0.00 0.00 2.85
756 787 1.268625 CCGTGCCTTCTGTTTTTACCC 59.731 52.381 0.00 0.00 0.00 3.69
757 788 2.227194 CGTGCCTTCTGTTTTTACCCT 58.773 47.619 0.00 0.00 0.00 4.34
758 789 2.031157 CGTGCCTTCTGTTTTTACCCTG 60.031 50.000 0.00 0.00 0.00 4.45
759 790 1.960689 TGCCTTCTGTTTTTACCCTGC 59.039 47.619 0.00 0.00 0.00 4.85
760 791 1.272490 GCCTTCTGTTTTTACCCTGCC 59.728 52.381 0.00 0.00 0.00 4.85
761 792 2.876581 CCTTCTGTTTTTACCCTGCCT 58.123 47.619 0.00 0.00 0.00 4.75
762 793 2.558359 CCTTCTGTTTTTACCCTGCCTG 59.442 50.000 0.00 0.00 0.00 4.85
763 794 2.286365 TCTGTTTTTACCCTGCCTGG 57.714 50.000 0.00 0.00 0.00 4.45
772 803 3.805928 CCTGCCTGGGACACTGTA 58.194 61.111 0.00 0.00 0.00 2.74
773 804 1.599047 CCTGCCTGGGACACTGTAG 59.401 63.158 0.00 0.00 0.00 2.74
774 805 1.078848 CTGCCTGGGACACTGTAGC 60.079 63.158 0.00 0.00 0.00 3.58
775 806 1.830587 CTGCCTGGGACACTGTAGCA 61.831 60.000 0.00 0.00 0.00 3.49
776 807 1.200760 TGCCTGGGACACTGTAGCAT 61.201 55.000 0.00 0.00 0.00 3.79
777 808 0.462759 GCCTGGGACACTGTAGCATC 60.463 60.000 0.00 0.00 0.00 3.91
778 809 0.179000 CCTGGGACACTGTAGCATCC 59.821 60.000 0.00 0.00 0.00 3.51
780 811 2.609046 GGGACACTGTAGCATCCCT 58.391 57.895 11.87 0.00 46.43 4.20
781 812 0.179000 GGGACACTGTAGCATCCCTG 59.821 60.000 11.87 0.00 46.43 4.45
782 813 3.784610 GGGACACTGTAGCATCCCTGC 62.785 61.905 11.87 0.00 46.43 4.85
814 845 4.475135 GGCAGAGGAGCCGGTTCC 62.475 72.222 28.69 28.69 46.12 3.62
899 965 1.975680 TCCCTCAATTATACGGGGAGC 59.024 52.381 0.00 0.00 40.84 4.70
901 967 1.697432 CCTCAATTATACGGGGAGCCA 59.303 52.381 0.00 0.00 0.00 4.75
903 969 1.071699 TCAATTATACGGGGAGCCAGC 59.928 52.381 0.00 0.00 0.00 4.85
979 1051 3.073735 ACAGCGAGGAGGAGCAGG 61.074 66.667 0.00 0.00 35.48 4.85
1077 1152 0.626382 TCCAGTGTCTCCTCTCCGAT 59.374 55.000 0.00 0.00 0.00 4.18
1124 1199 2.433664 GGGAATTGCGTCGGTCGT 60.434 61.111 0.00 0.00 42.13 4.34
1152 1230 2.689983 GGCGGATTCTGATGGATTTTGT 59.310 45.455 0.00 0.00 0.00 2.83
1262 1345 3.441500 AAGGTGGGTTTCTCCTTGATC 57.558 47.619 0.00 0.00 44.86 2.92
1528 1636 1.002544 GAGGAACAGCAGCAGGTTAGT 59.997 52.381 0.00 0.00 0.00 2.24
1558 1666 0.736325 GCAAGTCGTACCGCATCACT 60.736 55.000 0.00 0.00 0.00 3.41
1615 1913 1.452108 GGCGGCCAAGTTCTGCTAT 60.452 57.895 15.62 0.00 36.16 2.97
1687 1985 1.033574 CCGAGTACCTGGAGATGACC 58.966 60.000 0.00 0.00 0.00 4.02
2445 2838 3.799755 GTCGGCCGTGGCAATGAC 61.800 66.667 27.15 9.55 44.11 3.06
2669 3243 0.110823 GAATGCGCGTTTGTCGAGTT 60.111 50.000 17.37 0.00 42.86 3.01
3258 3846 3.311110 GTGTCCAGGGCGTCCAGA 61.311 66.667 9.71 0.50 34.83 3.86
3306 3894 1.739466 CCATGATGGTGTACACAGTGC 59.261 52.381 26.51 13.14 31.35 4.40
3307 3895 2.425539 CATGATGGTGTACACAGTGCA 58.574 47.619 26.51 17.81 0.00 4.57
3308 3896 1.877637 TGATGGTGTACACAGTGCAC 58.122 50.000 26.51 9.40 45.75 4.57
3309 3897 1.416030 TGATGGTGTACACAGTGCACT 59.584 47.619 26.51 15.25 45.75 4.40
3374 3962 3.736213 CGACATGTTTTTCACGATCAGG 58.264 45.455 0.00 0.00 0.00 3.86
3404 3992 2.029728 CGACACTCGAGATGAAAATGGC 59.970 50.000 21.68 6.04 43.74 4.40
3406 3994 3.005554 ACACTCGAGATGAAAATGGCTG 58.994 45.455 21.68 4.50 0.00 4.85
3407 3995 3.264947 CACTCGAGATGAAAATGGCTGA 58.735 45.455 21.68 0.00 0.00 4.26
3408 3996 3.309138 CACTCGAGATGAAAATGGCTGAG 59.691 47.826 21.68 0.00 0.00 3.35
3409 3997 3.196469 ACTCGAGATGAAAATGGCTGAGA 59.804 43.478 21.68 0.00 0.00 3.27
3410 3998 3.525537 TCGAGATGAAAATGGCTGAGAC 58.474 45.455 0.00 0.00 0.00 3.36
3411 3999 3.196469 TCGAGATGAAAATGGCTGAGACT 59.804 43.478 0.00 0.00 0.00 3.24
3412 4000 3.937706 CGAGATGAAAATGGCTGAGACTT 59.062 43.478 0.00 0.00 0.00 3.01
3413 4001 4.201792 CGAGATGAAAATGGCTGAGACTTG 60.202 45.833 0.00 0.00 0.00 3.16
3425 4013 1.068588 TGAGACTTGAGTTGTCACGGG 59.931 52.381 0.00 0.00 36.94 5.28
3476 4064 1.001240 TCGAGCGCGGCAAAAATTTG 61.001 50.000 10.69 1.52 37.47 2.32
3493 4081 3.593442 TTTGTCACCCCTTGTCATCTT 57.407 42.857 0.00 0.00 0.00 2.40
3568 4160 0.185901 ACAGGGGTTGTTCATGTGCT 59.814 50.000 0.00 0.00 36.31 4.40
3620 4212 2.736400 GCTGTGATTATGGCCTTTGCAC 60.736 50.000 3.32 6.83 40.13 4.57
3700 4292 3.788227 TCTGTCTTGGCTGGTATTGTT 57.212 42.857 0.00 0.00 0.00 2.83
3701 4293 4.098914 TCTGTCTTGGCTGGTATTGTTT 57.901 40.909 0.00 0.00 0.00 2.83
3715 4307 7.629222 GCTGGTATTGTTTCATCATTAGCTGTT 60.629 37.037 0.00 0.00 0.00 3.16
3716 4308 8.121305 TGGTATTGTTTCATCATTAGCTGTTT 57.879 30.769 0.00 0.00 0.00 2.83
3717 4309 8.243426 TGGTATTGTTTCATCATTAGCTGTTTC 58.757 33.333 0.00 0.00 0.00 2.78
3718 4310 8.462016 GGTATTGTTTCATCATTAGCTGTTTCT 58.538 33.333 0.00 0.00 0.00 2.52
3724 4316 8.821894 GTTTCATCATTAGCTGTTTCTACTAGG 58.178 37.037 0.00 0.00 0.00 3.02
3735 4327 6.531503 TGTTTCTACTAGGATTGAGGAGTG 57.468 41.667 0.00 0.00 0.00 3.51
3834 4427 4.524316 TTGGATTGCAAGTTGAATGGAG 57.476 40.909 7.16 0.00 0.00 3.86
3837 4430 4.158949 TGGATTGCAAGTTGAATGGAGATG 59.841 41.667 7.16 0.00 0.00 2.90
3838 4431 4.441079 GGATTGCAAGTTGAATGGAGATGG 60.441 45.833 7.16 0.00 0.00 3.51
3862 4455 5.412594 GCATGTCCATCTTTTGTAGAGACAA 59.587 40.000 0.00 0.00 43.94 3.18
3863 4456 8.916757 GGCATGTCCATCTTTTGTAGAGACAAA 61.917 40.741 0.00 0.00 42.90 2.83
3871 4464 3.394674 TTGTAGAGACAAATGTCCGCA 57.605 42.857 9.84 2.23 45.85 5.69
4008 4612 5.531659 CCTATCCGACACTCTTGTACTGTAT 59.468 44.000 0.00 0.00 35.47 2.29
4080 4684 1.476891 TCACATCTCGAGTGCCCTTAC 59.523 52.381 13.13 0.00 36.93 2.34
4088 4692 1.611977 CGAGTGCCCTTACGATATGGA 59.388 52.381 0.00 0.00 0.00 3.41
4089 4693 2.231478 CGAGTGCCCTTACGATATGGAT 59.769 50.000 0.00 0.00 0.00 3.41
4090 4694 3.589988 GAGTGCCCTTACGATATGGATG 58.410 50.000 0.00 0.00 0.00 3.51
4133 4737 3.430651 CGGCGGTATTTTAGTACTCCCAA 60.431 47.826 0.00 0.00 0.00 4.12
4139 4743 7.170489 GCGGTATTTTAGTACTCCCAATTACTC 59.830 40.741 0.00 0.00 30.97 2.59
4140 4744 7.654923 CGGTATTTTAGTACTCCCAATTACTCC 59.345 40.741 0.00 0.00 30.97 3.85
4141 4745 7.935755 GGTATTTTAGTACTCCCAATTACTCCC 59.064 40.741 0.00 0.00 30.97 4.30
4142 4746 7.766736 ATTTTAGTACTCCCAATTACTCCCT 57.233 36.000 0.00 0.00 30.97 4.20
4143 4747 6.803366 TTTAGTACTCCCAATTACTCCCTC 57.197 41.667 0.00 0.00 30.97 4.30
4144 4748 3.655384 AGTACTCCCAATTACTCCCTCC 58.345 50.000 0.00 0.00 0.00 4.30
4145 4749 1.497161 ACTCCCAATTACTCCCTCCG 58.503 55.000 0.00 0.00 0.00 4.63
4146 4750 1.273666 ACTCCCAATTACTCCCTCCGT 60.274 52.381 0.00 0.00 0.00 4.69
4147 4751 1.838077 CTCCCAATTACTCCCTCCGTT 59.162 52.381 0.00 0.00 0.00 4.44
4148 4752 2.238898 CTCCCAATTACTCCCTCCGTTT 59.761 50.000 0.00 0.00 0.00 3.60
4149 4753 2.237893 TCCCAATTACTCCCTCCGTTTC 59.762 50.000 0.00 0.00 0.00 2.78
4150 4754 2.026636 CCCAATTACTCCCTCCGTTTCA 60.027 50.000 0.00 0.00 0.00 2.69
4151 4755 3.560453 CCCAATTACTCCCTCCGTTTCAA 60.560 47.826 0.00 0.00 0.00 2.69
4152 4756 4.076394 CCAATTACTCCCTCCGTTTCAAA 58.924 43.478 0.00 0.00 0.00 2.69
4153 4757 4.521256 CCAATTACTCCCTCCGTTTCAAAA 59.479 41.667 0.00 0.00 0.00 2.44
4154 4758 5.185056 CCAATTACTCCCTCCGTTTCAAAAT 59.815 40.000 0.00 0.00 0.00 1.82
4155 4759 6.376018 CCAATTACTCCCTCCGTTTCAAAATA 59.624 38.462 0.00 0.00 0.00 1.40
4156 4760 7.415206 CCAATTACTCCCTCCGTTTCAAAATAG 60.415 40.741 0.00 0.00 0.00 1.73
4157 4761 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
4158 4762 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
4159 4763 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
4160 4764 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
4161 4765 5.183228 TCCCTCCGTTTCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
4162 4766 5.045869 TCCCTCCGTTTCAAAATAGATGACT 60.046 40.000 0.00 0.00 0.00 3.41
4163 4767 5.294552 CCCTCCGTTTCAAAATAGATGACTC 59.705 44.000 0.00 0.00 0.00 3.36
4164 4768 5.874810 CCTCCGTTTCAAAATAGATGACTCA 59.125 40.000 0.00 0.00 0.00 3.41
4165 4769 6.371548 CCTCCGTTTCAAAATAGATGACTCAA 59.628 38.462 0.00 0.00 0.00 3.02
4166 4770 7.129109 TCCGTTTCAAAATAGATGACTCAAC 57.871 36.000 0.00 0.00 0.00 3.18
4167 4771 6.934645 TCCGTTTCAAAATAGATGACTCAACT 59.065 34.615 0.00 0.00 0.00 3.16
4168 4772 7.444183 TCCGTTTCAAAATAGATGACTCAACTT 59.556 33.333 0.00 0.00 0.00 2.66
4169 4773 8.076178 CCGTTTCAAAATAGATGACTCAACTTT 58.924 33.333 0.00 0.00 0.00 2.66
4170 4774 8.895845 CGTTTCAAAATAGATGACTCAACTTTG 58.104 33.333 0.00 0.00 0.00 2.77
4171 4775 9.736023 GTTTCAAAATAGATGACTCAACTTTGT 57.264 29.630 0.00 0.00 0.00 2.83
4174 4778 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
4181 4785 9.614792 AGATGACTCAACTTTGTACTAACTTTT 57.385 29.630 0.00 0.00 0.00 2.27
4201 4805 9.908152 AACTTTTTATCTATTTTGAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
4202 4806 8.520351 ACTTTTTATCTATTTTGAAACGGAGGG 58.480 33.333 0.00 0.00 0.00 4.30
4203 4807 8.638629 TTTTTATCTATTTTGAAACGGAGGGA 57.361 30.769 0.00 0.00 0.00 4.20
4204 4808 7.859325 TTTATCTATTTTGAAACGGAGGGAG 57.141 36.000 0.00 0.00 0.00 4.30
4205 4809 4.903045 TCTATTTTGAAACGGAGGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
4206 4810 6.555463 ATCTATTTTGAAACGGAGGGAGTA 57.445 37.500 0.00 0.00 0.00 2.59
4207 4811 5.727434 TCTATTTTGAAACGGAGGGAGTAC 58.273 41.667 0.00 0.00 0.00 2.73
4208 4812 4.635699 ATTTTGAAACGGAGGGAGTACT 57.364 40.909 0.00 0.00 0.00 2.73
4209 4813 5.750352 ATTTTGAAACGGAGGGAGTACTA 57.250 39.130 0.00 0.00 0.00 1.82
4210 4814 4.796038 TTTGAAACGGAGGGAGTACTAG 57.204 45.455 0.00 0.00 0.00 2.57
4211 4815 3.446442 TGAAACGGAGGGAGTACTAGT 57.554 47.619 0.00 0.00 0.00 2.57
4212 4816 3.771216 TGAAACGGAGGGAGTACTAGTT 58.229 45.455 0.00 0.00 0.00 2.24
4213 4817 4.154942 TGAAACGGAGGGAGTACTAGTTT 58.845 43.478 0.00 2.41 35.51 2.66
4214 4818 4.590222 TGAAACGGAGGGAGTACTAGTTTT 59.410 41.667 0.00 0.00 34.06 2.43
4215 4819 4.532314 AACGGAGGGAGTACTAGTTTTG 57.468 45.455 0.00 0.00 0.00 2.44
4216 4820 2.233186 ACGGAGGGAGTACTAGTTTTGC 59.767 50.000 0.00 0.00 0.00 3.68
4217 4821 2.232941 CGGAGGGAGTACTAGTTTTGCA 59.767 50.000 0.00 0.00 0.00 4.08
4218 4822 3.597255 GGAGGGAGTACTAGTTTTGCAC 58.403 50.000 0.00 0.00 0.00 4.57
4219 4823 3.597255 GAGGGAGTACTAGTTTTGCACC 58.403 50.000 0.00 0.00 0.00 5.01
4220 4824 2.028385 AGGGAGTACTAGTTTTGCACCG 60.028 50.000 0.00 0.00 0.00 4.94
4221 4825 2.344025 GGAGTACTAGTTTTGCACCGG 58.656 52.381 0.00 0.00 0.00 5.28
4222 4826 1.730612 GAGTACTAGTTTTGCACCGGC 59.269 52.381 0.00 0.00 41.68 6.13
4223 4827 0.441145 GTACTAGTTTTGCACCGGCG 59.559 55.000 0.00 0.00 45.35 6.46
4224 4828 0.317799 TACTAGTTTTGCACCGGCGA 59.682 50.000 9.30 0.00 45.35 5.54
4225 4829 0.321298 ACTAGTTTTGCACCGGCGAT 60.321 50.000 9.30 0.00 45.35 4.58
4226 4830 0.373716 CTAGTTTTGCACCGGCGATC 59.626 55.000 9.30 0.00 45.35 3.69
4227 4831 0.320858 TAGTTTTGCACCGGCGATCA 60.321 50.000 9.30 0.00 45.35 2.92
4228 4832 1.154225 GTTTTGCACCGGCGATCAG 60.154 57.895 9.30 0.00 45.35 2.90
4229 4833 2.976840 TTTTGCACCGGCGATCAGC 61.977 57.895 9.30 7.20 45.35 4.26
4240 4844 3.474823 CGATCAGCACGCTTTAACG 57.525 52.632 0.00 0.00 39.50 3.18
4241 4845 0.989164 CGATCAGCACGCTTTAACGA 59.011 50.000 0.00 0.00 36.70 3.85
4242 4846 1.388768 CGATCAGCACGCTTTAACGAA 59.611 47.619 0.00 0.00 36.70 3.85
4243 4847 2.029244 CGATCAGCACGCTTTAACGAAT 59.971 45.455 0.00 0.00 36.70 3.34
4244 4848 3.242016 CGATCAGCACGCTTTAACGAATA 59.758 43.478 0.00 0.00 36.70 1.75
4245 4849 3.984018 TCAGCACGCTTTAACGAATAC 57.016 42.857 0.00 0.00 36.70 1.89
4246 4850 3.581755 TCAGCACGCTTTAACGAATACT 58.418 40.909 0.00 0.00 36.70 2.12
4247 4851 3.611113 TCAGCACGCTTTAACGAATACTC 59.389 43.478 0.00 0.00 36.70 2.59
4248 4852 2.928116 AGCACGCTTTAACGAATACTCC 59.072 45.455 0.00 0.00 36.70 3.85
4249 4853 2.928116 GCACGCTTTAACGAATACTCCT 59.072 45.455 0.00 0.00 36.70 3.69
4250 4854 3.241995 GCACGCTTTAACGAATACTCCTG 60.242 47.826 0.00 0.00 36.70 3.86
4251 4855 3.924686 CACGCTTTAACGAATACTCCTGT 59.075 43.478 0.00 0.00 36.70 4.00
4252 4856 5.097529 CACGCTTTAACGAATACTCCTGTA 58.902 41.667 0.00 0.00 36.70 2.74
4253 4857 5.747197 CACGCTTTAACGAATACTCCTGTAT 59.253 40.000 0.00 0.00 37.45 2.29
4254 4858 6.914215 CACGCTTTAACGAATACTCCTGTATA 59.086 38.462 0.00 0.00 36.08 1.47
4255 4859 7.113124 CACGCTTTAACGAATACTCCTGTATAG 59.887 40.741 0.00 0.00 36.08 1.31
4256 4860 7.012704 ACGCTTTAACGAATACTCCTGTATAGA 59.987 37.037 0.00 0.00 36.08 1.98
4257 4861 8.021973 CGCTTTAACGAATACTCCTGTATAGAT 58.978 37.037 0.00 0.00 38.33 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.880796 GGCGGTTGTGTTTTGGCAC 60.881 57.895 0.00 0.00 39.65 5.01
1 2 2.496817 GGCGGTTGTGTTTTGGCA 59.503 55.556 0.00 0.00 0.00 4.92
2 3 2.656973 CGGCGGTTGTGTTTTGGC 60.657 61.111 0.00 0.00 0.00 4.52
3 4 1.008995 CTCGGCGGTTGTGTTTTGG 60.009 57.895 7.21 0.00 0.00 3.28
4 5 1.008995 CCTCGGCGGTTGTGTTTTG 60.009 57.895 7.21 0.00 0.00 2.44
5 6 2.190841 CCCTCGGCGGTTGTGTTTT 61.191 57.895 7.21 0.00 0.00 2.43
6 7 2.593436 CCCTCGGCGGTTGTGTTT 60.593 61.111 7.21 0.00 0.00 2.83
22 23 3.512516 GATGGCCACGCTCTTGCC 61.513 66.667 8.16 0.00 45.56 4.52
23 24 2.437359 AGATGGCCACGCTCTTGC 60.437 61.111 8.16 0.00 0.00 4.01
24 25 0.463295 ATGAGATGGCCACGCTCTTG 60.463 55.000 28.14 0.00 0.00 3.02
25 26 0.254178 AATGAGATGGCCACGCTCTT 59.746 50.000 28.14 22.20 0.00 2.85
26 27 0.254178 AAATGAGATGGCCACGCTCT 59.746 50.000 28.14 19.93 0.00 4.09
27 28 1.064654 GAAAATGAGATGGCCACGCTC 59.935 52.381 23.95 23.95 0.00 5.03
28 29 1.098050 GAAAATGAGATGGCCACGCT 58.902 50.000 8.16 9.05 0.00 5.07
29 30 1.064654 GAGAAAATGAGATGGCCACGC 59.935 52.381 8.16 2.66 0.00 5.34
30 31 1.328680 CGAGAAAATGAGATGGCCACG 59.671 52.381 8.16 0.00 0.00 4.94
31 32 1.672881 CCGAGAAAATGAGATGGCCAC 59.327 52.381 8.16 1.58 0.00 5.01
32 33 2.018644 GCCGAGAAAATGAGATGGCCA 61.019 52.381 8.56 8.56 35.01 5.36
33 34 0.665298 GCCGAGAAAATGAGATGGCC 59.335 55.000 0.00 0.00 35.01 5.36
34 35 0.305922 CGCCGAGAAAATGAGATGGC 59.694 55.000 0.00 0.00 37.66 4.40
35 36 0.305922 GCGCCGAGAAAATGAGATGG 59.694 55.000 0.00 0.00 0.00 3.51
36 37 0.305922 GGCGCCGAGAAAATGAGATG 59.694 55.000 12.58 0.00 0.00 2.90
37 38 0.179000 AGGCGCCGAGAAAATGAGAT 59.821 50.000 23.20 0.00 0.00 2.75
38 39 0.036388 AAGGCGCCGAGAAAATGAGA 60.036 50.000 23.20 0.00 0.00 3.27
39 40 0.804989 AAAGGCGCCGAGAAAATGAG 59.195 50.000 23.20 0.00 0.00 2.90
40 41 0.802494 GAAAGGCGCCGAGAAAATGA 59.198 50.000 23.20 0.00 0.00 2.57
41 42 0.179163 GGAAAGGCGCCGAGAAAATG 60.179 55.000 23.20 0.00 0.00 2.32
42 43 1.313091 GGGAAAGGCGCCGAGAAAAT 61.313 55.000 23.20 0.00 0.00 1.82
43 44 1.969589 GGGAAAGGCGCCGAGAAAA 60.970 57.895 23.20 0.00 0.00 2.29
44 45 2.359478 GGGAAAGGCGCCGAGAAA 60.359 61.111 23.20 0.00 0.00 2.52
45 46 2.478335 AATGGGAAAGGCGCCGAGAA 62.478 55.000 23.20 6.41 0.00 2.87
46 47 2.478335 AAATGGGAAAGGCGCCGAGA 62.478 55.000 23.20 3.20 0.00 4.04
47 48 1.993369 GAAATGGGAAAGGCGCCGAG 61.993 60.000 23.20 0.00 0.00 4.63
48 49 2.034999 AAATGGGAAAGGCGCCGA 59.965 55.556 23.20 1.98 0.00 5.54
49 50 2.339556 TGAAATGGGAAAGGCGCCG 61.340 57.895 23.20 0.00 0.00 6.46
50 51 1.215382 GTGAAATGGGAAAGGCGCC 59.785 57.895 21.89 21.89 0.00 6.53
51 52 1.154035 CGTGAAATGGGAAAGGCGC 60.154 57.895 0.00 0.00 0.00 6.53
52 53 0.878416 TTCGTGAAATGGGAAAGGCG 59.122 50.000 0.00 0.00 0.00 5.52
53 54 2.159382 TCTTCGTGAAATGGGAAAGGC 58.841 47.619 0.00 0.00 0.00 4.35
54 55 3.674997 TCTCTTCGTGAAATGGGAAAGG 58.325 45.455 0.00 0.00 0.00 3.11
55 56 4.997395 TCTTCTCTTCGTGAAATGGGAAAG 59.003 41.667 0.00 0.00 0.00 2.62
56 57 4.968259 TCTTCTCTTCGTGAAATGGGAAA 58.032 39.130 0.00 0.00 0.00 3.13
57 58 4.617253 TCTTCTCTTCGTGAAATGGGAA 57.383 40.909 0.00 0.00 0.00 3.97
58 59 4.617253 TTCTTCTCTTCGTGAAATGGGA 57.383 40.909 0.00 0.00 0.00 4.37
59 60 5.335191 CCTTTTCTTCTCTTCGTGAAATGGG 60.335 44.000 0.00 0.00 38.73 4.00
60 61 5.335191 CCCTTTTCTTCTCTTCGTGAAATGG 60.335 44.000 0.00 0.00 40.42 3.16
61 62 5.693814 CCCTTTTCTTCTCTTCGTGAAATG 58.306 41.667 0.00 0.00 0.00 2.32
62 63 4.216472 GCCCTTTTCTTCTCTTCGTGAAAT 59.784 41.667 0.00 0.00 0.00 2.17
63 64 3.564225 GCCCTTTTCTTCTCTTCGTGAAA 59.436 43.478 0.00 0.00 0.00 2.69
64 65 3.139077 GCCCTTTTCTTCTCTTCGTGAA 58.861 45.455 0.00 0.00 0.00 3.18
65 66 2.104111 TGCCCTTTTCTTCTCTTCGTGA 59.896 45.455 0.00 0.00 0.00 4.35
66 67 2.481952 CTGCCCTTTTCTTCTCTTCGTG 59.518 50.000 0.00 0.00 0.00 4.35
67 68 2.551071 CCTGCCCTTTTCTTCTCTTCGT 60.551 50.000 0.00 0.00 0.00 3.85
68 69 2.079925 CCTGCCCTTTTCTTCTCTTCG 58.920 52.381 0.00 0.00 0.00 3.79
69 70 3.425162 TCCTGCCCTTTTCTTCTCTTC 57.575 47.619 0.00 0.00 0.00 2.87
70 71 4.394797 AATCCTGCCCTTTTCTTCTCTT 57.605 40.909 0.00 0.00 0.00 2.85
71 72 4.394797 AAATCCTGCCCTTTTCTTCTCT 57.605 40.909 0.00 0.00 0.00 3.10
72 73 4.081972 GGAAAATCCTGCCCTTTTCTTCTC 60.082 45.833 7.46 0.00 39.92 2.87
73 74 3.834813 GGAAAATCCTGCCCTTTTCTTCT 59.165 43.478 7.46 0.00 39.92 2.85
74 75 4.193826 GGAAAATCCTGCCCTTTTCTTC 57.806 45.455 7.46 0.00 39.92 2.87
87 88 2.023015 AGGAAATGGGGGAGGAAAATCC 60.023 50.000 0.00 0.00 38.76 3.01
88 89 3.404869 AGGAAATGGGGGAGGAAAATC 57.595 47.619 0.00 0.00 0.00 2.17
89 90 3.872405 AAGGAAATGGGGGAGGAAAAT 57.128 42.857 0.00 0.00 0.00 1.82
90 91 3.646867 AAAGGAAATGGGGGAGGAAAA 57.353 42.857 0.00 0.00 0.00 2.29
91 92 3.116551 TGAAAAGGAAATGGGGGAGGAAA 60.117 43.478 0.00 0.00 0.00 3.13
92 93 2.452823 TGAAAAGGAAATGGGGGAGGAA 59.547 45.455 0.00 0.00 0.00 3.36
93 94 2.077803 TGAAAAGGAAATGGGGGAGGA 58.922 47.619 0.00 0.00 0.00 3.71
94 95 2.179427 GTGAAAAGGAAATGGGGGAGG 58.821 52.381 0.00 0.00 0.00 4.30
95 96 2.179427 GGTGAAAAGGAAATGGGGGAG 58.821 52.381 0.00 0.00 0.00 4.30
96 97 1.203250 GGGTGAAAAGGAAATGGGGGA 60.203 52.381 0.00 0.00 0.00 4.81
97 98 1.275666 GGGTGAAAAGGAAATGGGGG 58.724 55.000 0.00 0.00 0.00 5.40
98 99 0.894835 CGGGTGAAAAGGAAATGGGG 59.105 55.000 0.00 0.00 0.00 4.96
99 100 0.246360 GCGGGTGAAAAGGAAATGGG 59.754 55.000 0.00 0.00 0.00 4.00
100 101 0.246360 GGCGGGTGAAAAGGAAATGG 59.754 55.000 0.00 0.00 0.00 3.16
101 102 1.256812 AGGCGGGTGAAAAGGAAATG 58.743 50.000 0.00 0.00 0.00 2.32
102 103 2.009681 AAGGCGGGTGAAAAGGAAAT 57.990 45.000 0.00 0.00 0.00 2.17
103 104 1.410882 CAAAGGCGGGTGAAAAGGAAA 59.589 47.619 0.00 0.00 0.00 3.13
104 105 1.036707 CAAAGGCGGGTGAAAAGGAA 58.963 50.000 0.00 0.00 0.00 3.36
105 106 1.460273 GCAAAGGCGGGTGAAAAGGA 61.460 55.000 0.00 0.00 0.00 3.36
106 107 1.006220 GCAAAGGCGGGTGAAAAGG 60.006 57.895 0.00 0.00 0.00 3.11
107 108 4.653555 GCAAAGGCGGGTGAAAAG 57.346 55.556 0.00 0.00 0.00 2.27
139 140 2.632512 TGGATTTTGGCAGGGAAGAAAC 59.367 45.455 0.00 0.00 0.00 2.78
140 141 2.969628 TGGATTTTGGCAGGGAAGAAA 58.030 42.857 0.00 0.00 0.00 2.52
141 142 2.692709 TGGATTTTGGCAGGGAAGAA 57.307 45.000 0.00 0.00 0.00 2.52
142 143 2.692709 TTGGATTTTGGCAGGGAAGA 57.307 45.000 0.00 0.00 0.00 2.87
143 144 2.613725 GCTTTGGATTTTGGCAGGGAAG 60.614 50.000 0.00 0.00 0.00 3.46
144 145 1.347378 GCTTTGGATTTTGGCAGGGAA 59.653 47.619 0.00 0.00 0.00 3.97
148 149 2.562298 TGTAGGCTTTGGATTTTGGCAG 59.438 45.455 0.00 0.00 0.00 4.85
389 413 3.057734 AGTACTGTGCTAACTTGTTCGC 58.942 45.455 0.00 3.50 0.00 4.70
391 415 5.694910 TGCTTAGTACTGTGCTAACTTGTTC 59.305 40.000 13.32 2.01 0.00 3.18
395 419 5.209818 TGTGCTTAGTACTGTGCTAACTT 57.790 39.130 13.32 0.00 0.00 2.66
397 421 5.917541 TTTGTGCTTAGTACTGTGCTAAC 57.082 39.130 13.32 11.08 0.00 2.34
400 424 7.687941 ATTATTTTGTGCTTAGTACTGTGCT 57.312 32.000 18.31 3.41 0.00 4.40
444 475 4.575236 CCGCCTCCTCCTAGTTTATTTTTC 59.425 45.833 0.00 0.00 0.00 2.29
530 561 4.468689 GGAGCCGGTTCCCTTCCG 62.469 72.222 26.02 0.00 46.49 4.30
531 562 3.009714 AGGAGCCGGTTCCCTTCC 61.010 66.667 31.54 14.82 38.02 3.46
532 563 0.686769 TAGAGGAGCCGGTTCCCTTC 60.687 60.000 31.54 23.32 38.02 3.46
533 564 0.976590 GTAGAGGAGCCGGTTCCCTT 60.977 60.000 31.54 22.21 38.02 3.95
534 565 1.381463 GTAGAGGAGCCGGTTCCCT 60.381 63.158 31.54 27.36 38.02 4.20
535 566 2.433146 GGTAGAGGAGCCGGTTCCC 61.433 68.421 31.54 22.56 38.02 3.97
536 567 2.783288 CGGTAGAGGAGCCGGTTCC 61.783 68.421 28.69 28.69 43.85 3.62
537 568 2.806237 CGGTAGAGGAGCCGGTTC 59.194 66.667 10.28 10.28 43.85 3.62
542 573 1.380112 ACTGGACGGTAGAGGAGCC 60.380 63.158 0.00 0.00 0.00 4.70
543 574 0.680280 TCACTGGACGGTAGAGGAGC 60.680 60.000 0.00 0.00 0.00 4.70
544 575 1.384525 CTCACTGGACGGTAGAGGAG 58.615 60.000 0.00 0.00 0.00 3.69
545 576 0.680280 GCTCACTGGACGGTAGAGGA 60.680 60.000 10.54 0.00 0.00 3.71
546 577 0.965866 TGCTCACTGGACGGTAGAGG 60.966 60.000 10.54 0.00 0.00 3.69
547 578 0.171455 GTGCTCACTGGACGGTAGAG 59.829 60.000 0.00 0.00 0.00 2.43
548 579 2.264124 GTGCTCACTGGACGGTAGA 58.736 57.895 0.00 0.00 0.00 2.59
549 580 4.891566 GTGCTCACTGGACGGTAG 57.108 61.111 0.00 0.00 0.00 3.18
554 585 1.215647 CCTACCGTGCTCACTGGAC 59.784 63.158 14.48 0.00 0.00 4.02
555 586 1.982395 CCCTACCGTGCTCACTGGA 60.982 63.158 14.48 0.00 0.00 3.86
556 587 1.330655 ATCCCTACCGTGCTCACTGG 61.331 60.000 8.56 8.56 0.00 4.00
557 588 0.179100 CATCCCTACCGTGCTCACTG 60.179 60.000 0.00 0.00 0.00 3.66
558 589 1.961180 GCATCCCTACCGTGCTCACT 61.961 60.000 0.00 0.00 36.02 3.41
559 590 1.521681 GCATCCCTACCGTGCTCAC 60.522 63.158 0.00 0.00 36.02 3.51
560 591 0.396556 TAGCATCCCTACCGTGCTCA 60.397 55.000 1.98 0.00 45.42 4.26
561 592 0.032267 GTAGCATCCCTACCGTGCTC 59.968 60.000 1.98 0.00 45.42 4.26
563 594 0.249489 CTGTAGCATCCCTACCGTGC 60.249 60.000 0.00 0.00 44.77 5.34
564 595 0.389391 CCTGTAGCATCCCTACCGTG 59.611 60.000 0.00 0.00 44.77 4.94
565 596 0.260816 TCCTGTAGCATCCCTACCGT 59.739 55.000 0.00 0.00 44.77 4.83
566 597 0.962489 CTCCTGTAGCATCCCTACCG 59.038 60.000 0.00 0.00 44.77 4.02
577 608 0.393537 CCAAAGGCAGGCTCCTGTAG 60.394 60.000 16.51 3.75 45.24 2.74
578 609 1.685224 CCAAAGGCAGGCTCCTGTA 59.315 57.895 16.51 0.00 45.24 2.74
579 610 2.437897 CCAAAGGCAGGCTCCTGT 59.562 61.111 16.51 0.00 45.24 4.00
580 611 2.362120 CCCAAAGGCAGGCTCCTG 60.362 66.667 11.47 11.47 46.15 3.86
590 621 2.228059 CAGCTGATAGATGCCCAAAGG 58.772 52.381 8.42 0.00 0.00 3.11
591 622 2.877168 GACAGCTGATAGATGCCCAAAG 59.123 50.000 23.35 0.00 34.41 2.77
592 623 2.239402 TGACAGCTGATAGATGCCCAAA 59.761 45.455 23.35 0.00 34.41 3.28
593 624 1.839354 TGACAGCTGATAGATGCCCAA 59.161 47.619 23.35 0.00 34.41 4.12
594 625 1.415289 CTGACAGCTGATAGATGCCCA 59.585 52.381 23.35 3.02 34.41 5.36
595 626 1.690893 TCTGACAGCTGATAGATGCCC 59.309 52.381 23.35 0.00 34.41 5.36
596 627 3.244146 ACATCTGACAGCTGATAGATGCC 60.244 47.826 36.52 15.52 46.47 4.40
597 628 3.992643 ACATCTGACAGCTGATAGATGC 58.007 45.455 36.52 16.72 46.47 3.91
599 630 9.746457 TTATACTACATCTGACAGCTGATAGAT 57.254 33.333 23.35 23.00 32.25 1.98
600 631 9.574516 TTTATACTACATCTGACAGCTGATAGA 57.425 33.333 23.35 21.84 32.25 1.98
601 632 9.619316 GTTTATACTACATCTGACAGCTGATAG 57.381 37.037 23.35 17.29 32.25 2.08
602 633 8.290325 CGTTTATACTACATCTGACAGCTGATA 58.710 37.037 23.35 7.64 32.25 2.15
603 634 7.142021 CGTTTATACTACATCTGACAGCTGAT 58.858 38.462 23.35 4.35 33.54 2.90
604 635 6.459710 CCGTTTATACTACATCTGACAGCTGA 60.460 42.308 23.35 0.00 0.00 4.26
605 636 5.687730 CCGTTTATACTACATCTGACAGCTG 59.312 44.000 13.48 13.48 0.00 4.24
606 637 5.736492 GCCGTTTATACTACATCTGACAGCT 60.736 44.000 0.00 0.00 0.00 4.24
607 638 4.444720 GCCGTTTATACTACATCTGACAGC 59.555 45.833 0.00 0.00 0.00 4.40
608 639 5.833082 AGCCGTTTATACTACATCTGACAG 58.167 41.667 0.00 0.00 0.00 3.51
609 640 5.358725 TGAGCCGTTTATACTACATCTGACA 59.641 40.000 0.00 0.00 0.00 3.58
610 641 5.828747 TGAGCCGTTTATACTACATCTGAC 58.171 41.667 0.00 0.00 0.00 3.51
611 642 5.826208 TCTGAGCCGTTTATACTACATCTGA 59.174 40.000 0.00 0.00 0.00 3.27
612 643 6.073327 TCTGAGCCGTTTATACTACATCTG 57.927 41.667 0.00 0.00 0.00 2.90
613 644 6.490381 TGATCTGAGCCGTTTATACTACATCT 59.510 38.462 0.00 0.00 0.00 2.90
614 645 6.583050 GTGATCTGAGCCGTTTATACTACATC 59.417 42.308 0.00 0.00 0.00 3.06
615 646 6.265649 AGTGATCTGAGCCGTTTATACTACAT 59.734 38.462 0.00 0.00 0.00 2.29
616 647 5.593095 AGTGATCTGAGCCGTTTATACTACA 59.407 40.000 0.00 0.00 0.00 2.74
617 648 6.074544 AGTGATCTGAGCCGTTTATACTAC 57.925 41.667 0.00 0.00 0.00 2.73
618 649 6.710597 AAGTGATCTGAGCCGTTTATACTA 57.289 37.500 0.00 0.00 0.00 1.82
619 650 5.599999 AAGTGATCTGAGCCGTTTATACT 57.400 39.130 0.00 0.00 0.00 2.12
620 651 5.502544 GCAAAGTGATCTGAGCCGTTTATAC 60.503 44.000 0.00 0.00 0.00 1.47
621 652 4.570772 GCAAAGTGATCTGAGCCGTTTATA 59.429 41.667 0.00 0.00 0.00 0.98
622 653 3.375299 GCAAAGTGATCTGAGCCGTTTAT 59.625 43.478 0.00 0.00 0.00 1.40
623 654 2.742053 GCAAAGTGATCTGAGCCGTTTA 59.258 45.455 0.00 0.00 0.00 2.01
624 655 1.537202 GCAAAGTGATCTGAGCCGTTT 59.463 47.619 0.00 0.00 0.00 3.60
625 656 1.160137 GCAAAGTGATCTGAGCCGTT 58.840 50.000 0.00 0.00 0.00 4.44
626 657 0.322975 AGCAAAGTGATCTGAGCCGT 59.677 50.000 0.00 0.00 0.00 5.68
627 658 1.929836 GTAGCAAAGTGATCTGAGCCG 59.070 52.381 0.00 0.00 0.00 5.52
628 659 2.935201 CTGTAGCAAAGTGATCTGAGCC 59.065 50.000 0.00 0.00 0.00 4.70
629 660 3.594134 ACTGTAGCAAAGTGATCTGAGC 58.406 45.455 0.00 0.00 0.00 4.26
630 661 5.714047 TGTACTGTAGCAAAGTGATCTGAG 58.286 41.667 0.00 0.00 0.00 3.35
631 662 5.722021 TGTACTGTAGCAAAGTGATCTGA 57.278 39.130 0.00 0.00 0.00 3.27
632 663 8.383619 GTTTATGTACTGTAGCAAAGTGATCTG 58.616 37.037 0.00 0.00 0.00 2.90
633 664 8.094548 TGTTTATGTACTGTAGCAAAGTGATCT 58.905 33.333 0.00 0.00 0.00 2.75
634 665 8.251750 TGTTTATGTACTGTAGCAAAGTGATC 57.748 34.615 0.00 0.00 0.00 2.92
635 666 7.878127 ACTGTTTATGTACTGTAGCAAAGTGAT 59.122 33.333 0.00 0.00 0.00 3.06
636 667 7.170828 CACTGTTTATGTACTGTAGCAAAGTGA 59.829 37.037 0.00 0.00 0.00 3.41
637 668 7.290842 CACTGTTTATGTACTGTAGCAAAGTG 58.709 38.462 0.00 0.00 0.00 3.16
638 669 6.073222 GCACTGTTTATGTACTGTAGCAAAGT 60.073 38.462 0.00 0.00 31.33 2.66
639 670 6.307155 GCACTGTTTATGTACTGTAGCAAAG 58.693 40.000 0.00 0.00 31.33 2.77
640 671 5.107259 CGCACTGTTTATGTACTGTAGCAAA 60.107 40.000 0.00 0.00 31.33 3.68
641 672 4.387559 CGCACTGTTTATGTACTGTAGCAA 59.612 41.667 0.00 0.00 31.33 3.91
642 673 3.924073 CGCACTGTTTATGTACTGTAGCA 59.076 43.478 0.00 0.00 31.33 3.49
643 674 3.241995 GCGCACTGTTTATGTACTGTAGC 60.242 47.826 0.30 0.00 0.00 3.58
644 675 3.924073 TGCGCACTGTTTATGTACTGTAG 59.076 43.478 5.66 0.00 0.00 2.74
645 676 3.915536 TGCGCACTGTTTATGTACTGTA 58.084 40.909 5.66 0.00 0.00 2.74
646 677 2.761559 TGCGCACTGTTTATGTACTGT 58.238 42.857 5.66 0.00 0.00 3.55
647 678 3.673366 CATGCGCACTGTTTATGTACTG 58.327 45.455 14.90 0.00 0.00 2.74
648 679 2.095853 GCATGCGCACTGTTTATGTACT 59.904 45.455 14.90 0.00 38.36 2.73
649 680 2.095853 AGCATGCGCACTGTTTATGTAC 59.904 45.455 14.90 0.00 42.27 2.90
650 681 2.355197 AGCATGCGCACTGTTTATGTA 58.645 42.857 14.90 0.00 42.27 2.29
651 682 1.167851 AGCATGCGCACTGTTTATGT 58.832 45.000 14.90 0.00 42.27 2.29
652 683 2.095692 TGTAGCATGCGCACTGTTTATG 59.904 45.455 14.90 6.35 42.27 1.90
653 684 2.352651 CTGTAGCATGCGCACTGTTTAT 59.647 45.455 14.90 0.00 42.27 1.40
654 685 1.731709 CTGTAGCATGCGCACTGTTTA 59.268 47.619 14.90 7.09 42.27 2.01
655 686 0.518636 CTGTAGCATGCGCACTGTTT 59.481 50.000 14.90 8.02 42.27 2.83
656 687 1.300971 CCTGTAGCATGCGCACTGTT 61.301 55.000 14.90 13.06 42.27 3.16
657 688 1.742880 CCTGTAGCATGCGCACTGT 60.743 57.895 14.90 1.51 42.27 3.55
658 689 1.448365 TCCTGTAGCATGCGCACTG 60.448 57.895 14.90 19.97 42.27 3.66
659 690 1.448540 GTCCTGTAGCATGCGCACT 60.449 57.895 14.90 9.41 42.27 4.40
660 691 2.802667 CGTCCTGTAGCATGCGCAC 61.803 63.158 14.90 14.79 42.27 5.34
661 692 2.509111 CGTCCTGTAGCATGCGCA 60.509 61.111 14.96 14.96 42.27 6.09
662 693 2.202743 TCGTCCTGTAGCATGCGC 60.203 61.111 13.01 10.18 38.99 6.09
663 694 0.179137 TTCTCGTCCTGTAGCATGCG 60.179 55.000 13.01 0.00 0.00 4.73
664 695 1.281899 GTTCTCGTCCTGTAGCATGC 58.718 55.000 10.51 10.51 0.00 4.06
665 696 2.094494 ACTGTTCTCGTCCTGTAGCATG 60.094 50.000 0.00 0.00 0.00 4.06
666 697 2.094494 CACTGTTCTCGTCCTGTAGCAT 60.094 50.000 0.00 0.00 0.00 3.79
667 698 1.269723 CACTGTTCTCGTCCTGTAGCA 59.730 52.381 0.00 0.00 0.00 3.49
668 699 1.983972 CACTGTTCTCGTCCTGTAGC 58.016 55.000 0.00 0.00 0.00 3.58
669 700 1.269723 TGCACTGTTCTCGTCCTGTAG 59.730 52.381 0.00 0.00 0.00 2.74
670 701 1.324383 TGCACTGTTCTCGTCCTGTA 58.676 50.000 0.00 0.00 0.00 2.74
671 702 0.681733 ATGCACTGTTCTCGTCCTGT 59.318 50.000 0.00 0.00 0.00 4.00
672 703 1.354040 GATGCACTGTTCTCGTCCTG 58.646 55.000 0.00 0.00 0.00 3.86
673 704 0.247736 GGATGCACTGTTCTCGTCCT 59.752 55.000 0.00 0.00 34.05 3.85
674 705 0.741221 GGGATGCACTGTTCTCGTCC 60.741 60.000 0.00 0.00 35.65 4.79
675 706 1.078759 CGGGATGCACTGTTCTCGTC 61.079 60.000 0.00 0.00 31.25 4.20
676 707 1.079819 CGGGATGCACTGTTCTCGT 60.080 57.895 0.00 0.00 31.25 4.18
677 708 2.456119 GCGGGATGCACTGTTCTCG 61.456 63.158 2.91 2.91 45.45 4.04
678 709 3.490890 GCGGGATGCACTGTTCTC 58.509 61.111 0.00 0.00 45.45 2.87
687 718 2.125147 TGCACTGTAGCGGGATGC 60.125 61.111 0.00 0.00 46.98 3.91
688 719 4.115279 CTGCACTGTAGCGGGATG 57.885 61.111 0.00 0.00 37.24 3.51
692 723 1.003839 TTTCCCTGCACTGTAGCGG 60.004 57.895 4.67 4.67 40.60 5.52
693 724 0.602638 TGTTTCCCTGCACTGTAGCG 60.603 55.000 0.00 0.00 37.31 4.26
694 725 1.160137 CTGTTTCCCTGCACTGTAGC 58.840 55.000 0.00 0.00 0.00 3.58
695 726 2.146342 CACTGTTTCCCTGCACTGTAG 58.854 52.381 0.00 0.00 0.00 2.74
696 727 1.488812 ACACTGTTTCCCTGCACTGTA 59.511 47.619 0.00 0.00 0.00 2.74
697 728 0.255890 ACACTGTTTCCCTGCACTGT 59.744 50.000 0.00 0.00 0.00 3.55
698 729 1.334869 GAACACTGTTTCCCTGCACTG 59.665 52.381 0.00 0.00 0.00 3.66
699 730 1.680338 GAACACTGTTTCCCTGCACT 58.320 50.000 0.00 0.00 0.00 4.40
700 731 0.307760 CGAACACTGTTTCCCTGCAC 59.692 55.000 0.00 0.00 0.00 4.57
701 732 0.817634 CCGAACACTGTTTCCCTGCA 60.818 55.000 0.00 0.00 0.00 4.41
702 733 0.818040 ACCGAACACTGTTTCCCTGC 60.818 55.000 0.00 0.00 0.00 4.85
703 734 1.675552 AACCGAACACTGTTTCCCTG 58.324 50.000 0.00 0.00 0.00 4.45
704 735 2.171027 TGTAACCGAACACTGTTTCCCT 59.829 45.455 0.00 0.00 0.00 4.20
705 736 2.546789 CTGTAACCGAACACTGTTTCCC 59.453 50.000 0.00 0.00 0.00 3.97
706 737 3.001939 CACTGTAACCGAACACTGTTTCC 59.998 47.826 0.00 0.00 0.00 3.13
707 738 3.545426 GCACTGTAACCGAACACTGTTTC 60.545 47.826 0.00 0.00 0.00 2.78
708 739 2.353579 GCACTGTAACCGAACACTGTTT 59.646 45.455 0.00 0.00 0.00 2.83
709 740 1.937899 GCACTGTAACCGAACACTGTT 59.062 47.619 0.00 0.00 0.00 3.16
710 741 1.134640 TGCACTGTAACCGAACACTGT 60.135 47.619 0.00 0.00 0.00 3.55
711 742 1.260561 GTGCACTGTAACCGAACACTG 59.739 52.381 10.32 0.00 0.00 3.66
712 743 1.134640 TGTGCACTGTAACCGAACACT 60.135 47.619 19.41 0.00 0.00 3.55
713 744 1.004292 GTGTGCACTGTAACCGAACAC 60.004 52.381 19.41 0.00 0.00 3.32
714 745 1.134640 AGTGTGCACTGTAACCGAACA 60.135 47.619 19.41 0.00 40.75 3.18
715 746 1.578583 AGTGTGCACTGTAACCGAAC 58.421 50.000 19.41 4.15 40.75 3.95
732 763 0.751643 AAAACAGAAGGCACGGCAGT 60.752 50.000 0.00 0.00 0.00 4.40
733 764 0.385390 AAAAACAGAAGGCACGGCAG 59.615 50.000 0.00 0.00 0.00 4.85
734 765 1.335496 GTAAAAACAGAAGGCACGGCA 59.665 47.619 0.00 0.00 0.00 5.69
735 766 1.335597 GGTAAAAACAGAAGGCACGGC 60.336 52.381 0.00 0.00 0.00 5.68
736 767 1.268625 GGGTAAAAACAGAAGGCACGG 59.731 52.381 0.00 0.00 0.00 4.94
737 768 2.031157 CAGGGTAAAAACAGAAGGCACG 60.031 50.000 0.00 0.00 0.00 5.34
738 769 2.288213 GCAGGGTAAAAACAGAAGGCAC 60.288 50.000 0.00 0.00 0.00 5.01
739 770 1.960689 GCAGGGTAAAAACAGAAGGCA 59.039 47.619 0.00 0.00 0.00 4.75
740 771 1.272490 GGCAGGGTAAAAACAGAAGGC 59.728 52.381 0.00 0.00 0.00 4.35
741 772 2.558359 CAGGCAGGGTAAAAACAGAAGG 59.442 50.000 0.00 0.00 0.00 3.46
742 773 2.558359 CCAGGCAGGGTAAAAACAGAAG 59.442 50.000 0.00 0.00 0.00 2.85
743 774 2.593026 CCAGGCAGGGTAAAAACAGAA 58.407 47.619 0.00 0.00 0.00 3.02
744 775 2.286365 CCAGGCAGGGTAAAAACAGA 57.714 50.000 0.00 0.00 0.00 3.41
755 786 1.599047 CTACAGTGTCCCAGGCAGG 59.401 63.158 0.00 0.00 37.03 4.85
756 787 1.078848 GCTACAGTGTCCCAGGCAG 60.079 63.158 0.00 0.00 0.00 4.85
757 788 1.200760 ATGCTACAGTGTCCCAGGCA 61.201 55.000 0.00 4.72 0.00 4.75
758 789 0.462759 GATGCTACAGTGTCCCAGGC 60.463 60.000 0.00 0.00 0.00 4.85
759 790 0.179000 GGATGCTACAGTGTCCCAGG 59.821 60.000 0.00 0.00 0.00 4.45
760 791 3.768633 GGATGCTACAGTGTCCCAG 57.231 57.895 0.00 0.00 0.00 4.45
763 794 0.462759 GCAGGGATGCTACAGTGTCC 60.463 60.000 0.00 0.00 0.00 4.02
764 795 0.462759 GGCAGGGATGCTACAGTGTC 60.463 60.000 0.00 0.00 34.73 3.67
765 796 1.604378 GGCAGGGATGCTACAGTGT 59.396 57.895 0.00 0.00 34.73 3.55
766 797 1.522355 CGGCAGGGATGCTACAGTG 60.522 63.158 0.00 0.00 34.73 3.66
767 798 1.990060 ACGGCAGGGATGCTACAGT 60.990 57.895 0.00 0.00 34.73 3.55
768 799 1.522355 CACGGCAGGGATGCTACAG 60.522 63.158 0.00 0.00 34.73 2.74
769 800 2.584064 CACGGCAGGGATGCTACA 59.416 61.111 0.00 0.00 34.73 2.74
770 801 2.897350 GCACGGCAGGGATGCTAC 60.897 66.667 0.00 0.00 36.40 3.58
771 802 4.175337 GGCACGGCAGGGATGCTA 62.175 66.667 0.00 0.00 39.38 3.49
798 829 4.475135 GGGAACCGGCTCCTCTGC 62.475 72.222 22.93 2.96 40.86 4.26
875 941 1.003233 CCCGTATAATTGAGGGAGGCC 59.997 57.143 0.00 0.00 46.64 5.19
903 969 3.776016 ATACCCTCTGAGGCCGGGG 62.776 68.421 18.51 15.91 42.44 5.73
909 975 3.393800 CGCATTTACATACCCTCTGAGG 58.606 50.000 17.02 17.02 34.30 3.86
1059 1134 1.479709 AATCGGAGAGGAGACACTGG 58.520 55.000 0.00 0.00 43.63 4.00
1077 1152 2.259204 CGTAGCACCGACCGGAAA 59.741 61.111 16.07 0.00 38.96 3.13
1124 1199 1.737236 CATCAGAATCCGCCGACAAAA 59.263 47.619 0.00 0.00 0.00 2.44
1152 1230 1.870383 CGATTCCCGGCGAAAACAA 59.130 52.632 9.30 0.00 33.08 2.83
1252 1330 1.186200 CACACGAGGGATCAAGGAGA 58.814 55.000 0.00 0.00 0.00 3.71
1262 1345 0.393077 ACAGAAAGGACACACGAGGG 59.607 55.000 0.00 0.00 0.00 4.30
1462 1546 1.745489 AATCTCTGTTTCCGCCGCC 60.745 57.895 0.00 0.00 0.00 6.13
1528 1636 0.968901 ACGACTTGCCGTCCTCCATA 60.969 55.000 0.00 0.00 38.56 2.74
1630 1928 3.222354 GACGTTCCAGGGCGTGAGT 62.222 63.158 9.09 3.24 41.70 3.41
1723 2102 1.617947 CCTGCGAAAGGTAGGCCTCT 61.618 60.000 9.68 0.00 46.33 3.69
1963 2356 2.437359 CAGCCCTCCAAAGCCTCG 60.437 66.667 0.00 0.00 0.00 4.63
2011 2404 3.461773 ATGGACCTCGACAGCCCG 61.462 66.667 0.00 0.00 0.00 6.13
2380 2773 0.807667 CTTCCTCCTCGGTGATTGCG 60.808 60.000 0.00 0.00 0.00 4.85
2669 3243 4.892965 AGCCGGCAACCAACTGCA 62.893 61.111 31.54 0.00 44.52 4.41
3028 3616 3.817787 CATGCCGTCCATGTCCAG 58.182 61.111 5.42 0.00 45.05 3.86
3273 3861 0.108329 ATCATGGTTCGGTCGGTCAC 60.108 55.000 0.00 0.00 0.00 3.67
3306 3894 1.434622 GATCATCCTGCGCACCAGTG 61.435 60.000 5.66 3.27 40.06 3.66
3307 3895 1.153289 GATCATCCTGCGCACCAGT 60.153 57.895 5.66 0.00 40.06 4.00
3308 3896 2.242572 CGATCATCCTGCGCACCAG 61.243 63.158 5.66 0.00 41.41 4.00
3309 3897 2.202919 CGATCATCCTGCGCACCA 60.203 61.111 5.66 0.00 0.00 4.17
3374 3962 2.172534 TCGAGTGTCGAGCTCTTCC 58.827 57.895 12.85 0.00 44.82 3.46
3404 3992 2.398498 CCGTGACAACTCAAGTCTCAG 58.602 52.381 0.00 0.00 36.94 3.35
3406 3994 1.068741 ACCCGTGACAACTCAAGTCTC 59.931 52.381 0.00 0.00 36.94 3.36
3407 3995 1.120530 ACCCGTGACAACTCAAGTCT 58.879 50.000 0.00 0.00 36.94 3.24
3408 3996 2.673833 CTACCCGTGACAACTCAAGTC 58.326 52.381 0.00 0.00 36.55 3.01
3409 3997 1.270147 GCTACCCGTGACAACTCAAGT 60.270 52.381 0.00 0.00 0.00 3.16
3410 3998 1.429463 GCTACCCGTGACAACTCAAG 58.571 55.000 0.00 0.00 0.00 3.02
3411 3999 0.034337 GGCTACCCGTGACAACTCAA 59.966 55.000 0.00 0.00 0.00 3.02
3412 4000 1.116536 TGGCTACCCGTGACAACTCA 61.117 55.000 0.00 0.00 0.00 3.41
3413 4001 0.389948 CTGGCTACCCGTGACAACTC 60.390 60.000 0.00 0.00 0.00 3.01
3425 4013 1.668751 CACTCTCTCTCGTCTGGCTAC 59.331 57.143 0.00 0.00 0.00 3.58
3476 4064 2.427506 GACAAGATGACAAGGGGTGAC 58.572 52.381 0.00 0.00 0.00 3.67
3506 4098 1.012486 GTGGTCACACGAATCGGGTC 61.012 60.000 7.91 0.00 40.46 4.46
3568 4160 4.338400 AGCTAAGCATATCGTACAGACACA 59.662 41.667 0.00 0.00 0.00 3.72
3620 4212 0.538057 ACTGCCACCACATCACAAGG 60.538 55.000 0.00 0.00 0.00 3.61
3700 4292 8.306313 TCCTAGTAGAAACAGCTAATGATGAA 57.694 34.615 0.00 0.00 33.22 2.57
3701 4293 7.898014 TCCTAGTAGAAACAGCTAATGATGA 57.102 36.000 0.00 0.00 33.22 2.92
3715 4307 4.610333 TGCACTCCTCAATCCTAGTAGAA 58.390 43.478 0.00 0.00 0.00 2.10
3716 4308 4.251103 TGCACTCCTCAATCCTAGTAGA 57.749 45.455 0.00 0.00 0.00 2.59
3717 4309 4.798924 GCATGCACTCCTCAATCCTAGTAG 60.799 50.000 14.21 0.00 0.00 2.57
3718 4310 3.070159 GCATGCACTCCTCAATCCTAGTA 59.930 47.826 14.21 0.00 0.00 1.82
3719 4311 2.158842 GCATGCACTCCTCAATCCTAGT 60.159 50.000 14.21 0.00 0.00 2.57
3720 4312 2.492012 GCATGCACTCCTCAATCCTAG 58.508 52.381 14.21 0.00 0.00 3.02
3724 4316 0.745845 ACGGCATGCACTCCTCAATC 60.746 55.000 21.36 0.00 0.00 2.67
3735 4327 0.317436 TTCGAAACAACACGGCATGC 60.317 50.000 9.90 9.90 0.00 4.06
3837 4430 4.333926 GTCTCTACAAAAGATGGACATGCC 59.666 45.833 0.00 0.00 32.32 4.40
3838 4431 4.937620 TGTCTCTACAAAAGATGGACATGC 59.062 41.667 0.00 0.00 35.55 4.06
3854 4447 2.299013 AGTGTGCGGACATTTGTCTCTA 59.701 45.455 14.45 0.00 44.20 2.43
3862 4455 3.130340 AGAAAACAAAGTGTGCGGACATT 59.870 39.130 14.45 6.03 33.63 2.71
3863 4456 2.687935 AGAAAACAAAGTGTGCGGACAT 59.312 40.909 14.45 0.00 33.63 3.06
3871 4464 6.565247 CGCCTTTACGATAGAAAACAAAGTGT 60.565 38.462 0.00 0.00 41.38 3.55
3976 4580 1.338337 AGTGTCGGATAGGCGAGAATG 59.662 52.381 0.00 0.00 0.00 2.67
4008 4612 6.635030 CACTACATGTGGTGTCTAGCTATA 57.365 41.667 28.63 0.00 42.68 1.31
4048 4652 5.047660 ACTCGAGATGTGAAGAAAAGCTACT 60.048 40.000 21.68 0.00 0.00 2.57
4080 4684 6.280643 TCCAAGTCACTAAACATCCATATCG 58.719 40.000 0.00 0.00 0.00 2.92
4088 4692 6.349944 CCGTAGTACTCCAAGTCACTAAACAT 60.350 42.308 0.00 0.00 0.00 2.71
4089 4693 5.048504 CCGTAGTACTCCAAGTCACTAAACA 60.049 44.000 0.00 0.00 0.00 2.83
4090 4694 5.397326 CCGTAGTACTCCAAGTCACTAAAC 58.603 45.833 0.00 0.00 0.00 2.01
4133 4737 6.954232 TCTATTTTGAAACGGAGGGAGTAAT 58.046 36.000 0.00 0.00 0.00 1.89
4139 4743 5.186198 AGTCATCTATTTTGAAACGGAGGG 58.814 41.667 0.00 0.00 0.00 4.30
4140 4744 5.874810 TGAGTCATCTATTTTGAAACGGAGG 59.125 40.000 0.00 0.00 0.00 4.30
4141 4745 6.968131 TGAGTCATCTATTTTGAAACGGAG 57.032 37.500 0.00 0.00 0.00 4.63
4142 4746 6.934645 AGTTGAGTCATCTATTTTGAAACGGA 59.065 34.615 1.70 0.00 0.00 4.69
4143 4747 7.133891 AGTTGAGTCATCTATTTTGAAACGG 57.866 36.000 1.70 0.00 0.00 4.44
4144 4748 8.895845 CAAAGTTGAGTCATCTATTTTGAAACG 58.104 33.333 4.14 0.00 38.91 3.60
4145 4749 9.736023 ACAAAGTTGAGTCATCTATTTTGAAAC 57.264 29.630 15.99 0.00 38.91 2.78
4148 4752 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
4155 4759 9.614792 AAAAGTTAGTACAAAGTTGAGTCATCT 57.385 29.630 0.00 0.00 0.00 2.90
4175 4779 9.908152 CCTCCGTTTCAAAATAGATAAAAAGTT 57.092 29.630 0.00 0.00 0.00 2.66
4176 4780 8.520351 CCCTCCGTTTCAAAATAGATAAAAAGT 58.480 33.333 0.00 0.00 0.00 2.66
4177 4781 8.736244 TCCCTCCGTTTCAAAATAGATAAAAAG 58.264 33.333 0.00 0.00 0.00 2.27
4178 4782 8.638629 TCCCTCCGTTTCAAAATAGATAAAAA 57.361 30.769 0.00 0.00 0.00 1.94
4179 4783 7.886446 ACTCCCTCCGTTTCAAAATAGATAAAA 59.114 33.333 0.00 0.00 0.00 1.52
4180 4784 7.399634 ACTCCCTCCGTTTCAAAATAGATAAA 58.600 34.615 0.00 0.00 0.00 1.40
4181 4785 6.954232 ACTCCCTCCGTTTCAAAATAGATAA 58.046 36.000 0.00 0.00 0.00 1.75
4182 4786 6.555463 ACTCCCTCCGTTTCAAAATAGATA 57.445 37.500 0.00 0.00 0.00 1.98
4183 4787 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
4184 4788 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
4185 4789 5.731591 AGTACTCCCTCCGTTTCAAAATAG 58.268 41.667 0.00 0.00 0.00 1.73
4186 4790 5.750352 AGTACTCCCTCCGTTTCAAAATA 57.250 39.130 0.00 0.00 0.00 1.40
4187 4791 4.635699 AGTACTCCCTCCGTTTCAAAAT 57.364 40.909 0.00 0.00 0.00 1.82
4188 4792 4.590222 ACTAGTACTCCCTCCGTTTCAAAA 59.410 41.667 0.00 0.00 0.00 2.44
4189 4793 4.154942 ACTAGTACTCCCTCCGTTTCAAA 58.845 43.478 0.00 0.00 0.00 2.69
4190 4794 3.771216 ACTAGTACTCCCTCCGTTTCAA 58.229 45.455 0.00 0.00 0.00 2.69
4191 4795 3.446442 ACTAGTACTCCCTCCGTTTCA 57.554 47.619 0.00 0.00 0.00 2.69
4192 4796 4.797800 AAACTAGTACTCCCTCCGTTTC 57.202 45.455 0.00 0.00 0.00 2.78
4193 4797 4.801914 GCAAAACTAGTACTCCCTCCGTTT 60.802 45.833 0.00 0.00 0.00 3.60
4194 4798 3.306571 GCAAAACTAGTACTCCCTCCGTT 60.307 47.826 0.00 0.00 0.00 4.44
4195 4799 2.233186 GCAAAACTAGTACTCCCTCCGT 59.767 50.000 0.00 0.00 0.00 4.69
4196 4800 2.232941 TGCAAAACTAGTACTCCCTCCG 59.767 50.000 0.00 0.00 0.00 4.63
4197 4801 3.597255 GTGCAAAACTAGTACTCCCTCC 58.403 50.000 0.00 0.00 0.00 4.30
4198 4802 3.597255 GGTGCAAAACTAGTACTCCCTC 58.403 50.000 0.00 0.00 0.00 4.30
4199 4803 2.028385 CGGTGCAAAACTAGTACTCCCT 60.028 50.000 0.00 0.00 0.00 4.20
4200 4804 2.344025 CGGTGCAAAACTAGTACTCCC 58.656 52.381 0.00 0.00 0.00 4.30
4201 4805 2.344025 CCGGTGCAAAACTAGTACTCC 58.656 52.381 0.00 0.00 0.00 3.85
4202 4806 1.730612 GCCGGTGCAAAACTAGTACTC 59.269 52.381 1.90 0.00 37.47 2.59
4203 4807 1.804601 GCCGGTGCAAAACTAGTACT 58.195 50.000 1.90 0.00 37.47 2.73
4204 4808 0.441145 CGCCGGTGCAAAACTAGTAC 59.559 55.000 0.00 0.00 37.32 2.73
4205 4809 0.317799 TCGCCGGTGCAAAACTAGTA 59.682 50.000 11.05 0.00 37.32 1.82
4206 4810 0.321298 ATCGCCGGTGCAAAACTAGT 60.321 50.000 11.05 0.00 37.32 2.57
4207 4811 0.373716 GATCGCCGGTGCAAAACTAG 59.626 55.000 11.05 0.00 37.32 2.57
4208 4812 0.320858 TGATCGCCGGTGCAAAACTA 60.321 50.000 11.05 0.00 37.32 2.24
4209 4813 1.577328 CTGATCGCCGGTGCAAAACT 61.577 55.000 11.05 0.00 37.32 2.66
4210 4814 1.154225 CTGATCGCCGGTGCAAAAC 60.154 57.895 11.05 0.12 37.32 2.43
4211 4815 2.976840 GCTGATCGCCGGTGCAAAA 61.977 57.895 11.05 0.00 37.32 2.44
4212 4816 3.430862 GCTGATCGCCGGTGCAAA 61.431 61.111 11.05 0.00 37.32 3.68
4213 4817 4.695993 TGCTGATCGCCGGTGCAA 62.696 61.111 11.05 0.00 38.05 4.08
4222 4826 0.989164 TCGTTAAAGCGTGCTGATCG 59.011 50.000 0.00 0.00 0.00 3.69
4223 4827 3.658351 ATTCGTTAAAGCGTGCTGATC 57.342 42.857 0.00 0.00 0.00 2.92
4224 4828 4.181578 AGTATTCGTTAAAGCGTGCTGAT 58.818 39.130 0.00 0.00 0.00 2.90
4225 4829 3.581755 AGTATTCGTTAAAGCGTGCTGA 58.418 40.909 0.00 0.00 0.00 4.26
4226 4830 3.241995 GGAGTATTCGTTAAAGCGTGCTG 60.242 47.826 0.00 0.00 0.00 4.41
4227 4831 2.928116 GGAGTATTCGTTAAAGCGTGCT 59.072 45.455 0.00 0.00 0.00 4.40
4228 4832 2.928116 AGGAGTATTCGTTAAAGCGTGC 59.072 45.455 0.00 0.00 0.00 5.34
4229 4833 3.924686 ACAGGAGTATTCGTTAAAGCGTG 59.075 43.478 0.00 0.00 0.00 5.34
4230 4834 4.184079 ACAGGAGTATTCGTTAAAGCGT 57.816 40.909 0.00 0.00 0.00 5.07
4231 4835 7.358066 TCTATACAGGAGTATTCGTTAAAGCG 58.642 38.462 0.00 0.00 41.15 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.