Multiple sequence alignment - TraesCS5D01G385100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G385100 chr5D 100.000 5563 0 0 1 5563 454178765 454184327 0.000000e+00 10274.0
1 TraesCS5D01G385100 chr5D 80.282 568 85 20 3976 4531 49102563 49103115 2.410000e-108 403.0
2 TraesCS5D01G385100 chr5D 92.222 270 18 2 5296 5563 420876780 420876512 4.070000e-101 379.0
3 TraesCS5D01G385100 chr5D 89.925 268 26 1 5297 5563 268930111 268930378 1.480000e-90 344.0
4 TraesCS5D01G385100 chr5B 84.681 2585 207 93 19 2520 555150269 555152747 0.000000e+00 2405.0
5 TraesCS5D01G385100 chr5B 95.406 1393 50 9 2515 3906 555152777 555154156 0.000000e+00 2206.0
6 TraesCS5D01G385100 chr5B 94.428 1041 40 8 3941 4964 555154222 555155261 0.000000e+00 1585.0
7 TraesCS5D01G385100 chr5B 80.175 570 82 21 3976 4531 51828135 51828687 1.120000e-106 398.0
8 TraesCS5D01G385100 chr5B 86.742 264 16 8 5045 5298 555155294 555155548 5.490000e-70 276.0
9 TraesCS5D01G385100 chr5A 93.790 1417 81 7 2496 3907 573588996 573590410 0.000000e+00 2122.0
10 TraesCS5D01G385100 chr5A 84.317 1830 152 69 661 2421 573587101 573588864 0.000000e+00 1664.0
11 TraesCS5D01G385100 chr5A 94.225 710 28 8 3958 4662 573590429 573591130 0.000000e+00 1072.0
12 TraesCS5D01G385100 chr5A 89.571 652 40 18 4664 5298 573591752 573592392 0.000000e+00 802.0
13 TraesCS5D01G385100 chr5A 80.458 568 84 19 3976 4531 38721063 38721615 5.190000e-110 409.0
14 TraesCS5D01G385100 chr5A 81.250 176 7 15 384 550 573586882 573587040 9.790000e-23 119.0
15 TraesCS5D01G385100 chr2A 84.805 487 48 10 3220 3705 737042298 737042759 3.030000e-127 466.0
16 TraesCS5D01G385100 chr2A 86.813 273 32 3 2709 2980 736968998 736969267 9.060000e-78 302.0
17 TraesCS5D01G385100 chr2A 94.059 101 6 0 2173 2273 736968902 736969002 2.680000e-33 154.0
18 TraesCS5D01G385100 chr2D 84.600 487 54 11 3220 3705 605653297 605653763 1.090000e-126 464.0
19 TraesCS5D01G385100 chr2D 83.197 488 60 10 3219 3705 605671604 605672070 1.430000e-115 427.0
20 TraesCS5D01G385100 chr2D 86.126 382 48 5 2960 3340 605434135 605434512 1.870000e-109 407.0
21 TraesCS5D01G385100 chr2D 85.319 361 33 7 3548 3907 605434940 605435281 6.850000e-94 355.0
22 TraesCS5D01G385100 chr2D 89.963 269 24 3 5297 5563 218302734 218303001 1.480000e-90 344.0
23 TraesCS5D01G385100 chr2D 86.447 273 30 5 2709 2980 605635867 605636133 5.450000e-75 292.0
24 TraesCS5D01G385100 chr2D 93.069 101 7 0 2173 2273 605635771 605635871 1.250000e-31 148.0
25 TraesCS5D01G385100 chr2D 93.069 101 6 1 2173 2273 605537063 605537162 4.490000e-31 147.0
26 TraesCS5D01G385100 chr2D 97.500 40 1 0 3771 3810 605653778 605653817 1.000000e-07 69.4
27 TraesCS5D01G385100 chr2D 97.500 40 1 0 3771 3810 605672085 605672124 1.000000e-07 69.4
28 TraesCS5D01G385100 chr2B 88.542 384 42 2 2960 3342 735853400 735853782 1.090000e-126 464.0
29 TraesCS5D01G385100 chr2B 83.265 490 55 16 3222 3705 736211001 736211469 5.150000e-115 425.0
30 TraesCS5D01G385100 chr2B 88.971 272 25 3 5295 5563 571528538 571528807 1.160000e-86 331.0
31 TraesCS5D01G385100 chr2B 90.500 200 19 0 2709 2908 735882258 735882457 1.190000e-66 265.0
32 TraesCS5D01G385100 chr2B 83.636 275 33 4 3220 3482 736237252 736237526 1.200000e-61 248.0
33 TraesCS5D01G385100 chr2B 81.529 314 41 10 2652 2962 735926334 735926633 5.570000e-60 243.0
34 TraesCS5D01G385100 chr2B 88.144 194 23 0 2709 2902 736119565 736119758 1.210000e-56 231.0
35 TraesCS5D01G385100 chr2B 92.079 101 8 0 2173 2273 735882162 735882262 5.810000e-30 143.0
36 TraesCS5D01G385100 chr2B 91.919 99 8 0 2173 2271 736119469 736119567 7.510000e-29 139.0
37 TraesCS5D01G385100 chr2B 91.089 101 8 1 2173 2273 735949675 735949774 9.720000e-28 135.0
38 TraesCS5D01G385100 chr2B 90.099 101 10 0 2173 2273 736214477 736214577 1.260000e-26 132.0
39 TraesCS5D01G385100 chr2B 93.182 44 3 0 3767 3810 736211480 736211523 1.290000e-06 65.8
40 TraesCS5D01G385100 chr4B 91.367 278 21 2 5288 5563 285532286 285532010 1.460000e-100 377.0
41 TraesCS5D01G385100 chr3D 90.074 272 22 4 5295 5563 153088113 153087844 1.150000e-91 348.0
42 TraesCS5D01G385100 chr6D 89.744 273 24 4 5294 5563 223692603 223692874 4.130000e-91 346.0
43 TraesCS5D01G385100 chr3A 89.299 271 24 4 5295 5563 150463926 150464193 8.930000e-88 335.0
44 TraesCS5D01G385100 chr1B 88.889 270 27 2 5296 5563 271834454 271834186 4.150000e-86 329.0
45 TraesCS5D01G385100 chr7D 77.374 358 72 8 4014 4365 387915738 387916092 2.630000e-48 204.0
46 TraesCS5D01G385100 chr7A 76.164 365 78 9 4006 4365 438144523 438144883 3.420000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G385100 chr5D 454178765 454184327 5562 False 10274.0 10274 100.000000 1 5563 1 chr5D.!!$F3 5562
1 TraesCS5D01G385100 chr5D 49102563 49103115 552 False 403.0 403 80.282000 3976 4531 1 chr5D.!!$F1 555
2 TraesCS5D01G385100 chr5B 555150269 555155548 5279 False 1618.0 2405 90.314250 19 5298 4 chr5B.!!$F2 5279
3 TraesCS5D01G385100 chr5B 51828135 51828687 552 False 398.0 398 80.175000 3976 4531 1 chr5B.!!$F1 555
4 TraesCS5D01G385100 chr5A 573586882 573592392 5510 False 1155.8 2122 88.630600 384 5298 5 chr5A.!!$F2 4914
5 TraesCS5D01G385100 chr5A 38721063 38721615 552 False 409.0 409 80.458000 3976 4531 1 chr5A.!!$F1 555
6 TraesCS5D01G385100 chr2D 605434135 605435281 1146 False 381.0 407 85.722500 2960 3907 2 chr2D.!!$F3 947
7 TraesCS5D01G385100 chr2D 605653297 605653817 520 False 266.7 464 91.050000 3220 3810 2 chr2D.!!$F5 590
8 TraesCS5D01G385100 chr2D 605671604 605672124 520 False 248.2 427 90.348500 3219 3810 2 chr2D.!!$F6 591
9 TraesCS5D01G385100 chr2B 736211001 736214577 3576 False 207.6 425 88.848667 2173 3810 3 chr2B.!!$F8 1637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
933 989 0.034059 CTGAGCTTTCGACTGGTGGT 59.966 55.0 0.00 0.00 0.00 4.16 F
1300 1387 0.400594 ACCAGAGTAGTTGGTTGGCC 59.599 55.0 0.00 0.00 46.57 5.36 F
1531 1657 0.401356 TCCTCCTTGCTTGTCATGCA 59.599 50.0 9.22 9.22 38.80 3.96 F
1920 2047 0.608856 ATCACATTGGTTGGCAGCGA 60.609 50.0 0.00 0.00 0.00 4.93 F
3354 3873 0.038159 GACTCAGTAGGCGCAACAGT 60.038 55.0 10.83 7.26 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2221 2361 0.837272 ACATATCCCCAACCTCCACG 59.163 55.0 0.00 0.00 0.00 4.94 R
2985 3208 0.036875 AGGTTTCGAGGGCCTTCAAG 59.963 55.0 16.07 0.00 0.00 3.02 R
3354 3873 0.261402 CCAGGGGCATTGTTCCCATA 59.739 55.0 16.06 0.00 45.73 2.74 R
3747 4273 2.548904 CTCTGCAAGATAGCCATCAAGC 59.451 50.0 0.00 0.00 45.62 4.01 R
5275 8378 0.316522 TCACACTGTCTGCTGAGCTC 59.683 55.0 6.82 6.82 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 9.275572 ACTACTACTCTAATTTATTTCCCACCA 57.724 33.333 0.00 0.00 0.00 4.17
52 53 2.274645 CCCACCATTTCCGCTGCAA 61.275 57.895 0.00 0.00 0.00 4.08
62 63 1.819208 CCGCTGCAATCGATGGGAA 60.819 57.895 0.00 0.00 0.00 3.97
96 97 2.504681 GCAGCCGCAACATTTCCG 60.505 61.111 0.00 0.00 38.36 4.30
97 98 2.504681 CAGCCGCAACATTTCCGC 60.505 61.111 0.00 0.00 0.00 5.54
98 99 3.747976 AGCCGCAACATTTCCGCC 61.748 61.111 0.00 0.00 0.00 6.13
99 100 3.747976 GCCGCAACATTTCCGCCT 61.748 61.111 0.00 0.00 0.00 5.52
100 101 2.179018 CCGCAACATTTCCGCCTG 59.821 61.111 0.00 0.00 0.00 4.85
101 102 2.625823 CCGCAACATTTCCGCCTGT 61.626 57.895 0.00 0.00 0.00 4.00
103 104 1.154225 GCAACATTTCCGCCTGTCG 60.154 57.895 0.00 0.00 38.08 4.35
104 105 1.573829 GCAACATTTCCGCCTGTCGA 61.574 55.000 0.00 0.00 41.67 4.20
105 106 0.165944 CAACATTTCCGCCTGTCGAC 59.834 55.000 9.11 9.11 41.67 4.20
106 107 0.953960 AACATTTCCGCCTGTCGACC 60.954 55.000 14.12 0.00 41.67 4.79
108 109 2.589157 ATTTCCGCCTGTCGACCCA 61.589 57.895 14.12 0.00 41.67 4.51
126 127 6.379703 TCGACCCAACCAAATAATTGATTGAT 59.620 34.615 0.00 0.00 41.83 2.57
128 129 8.194104 CGACCCAACCAAATAATTGATTGATAA 58.806 33.333 0.00 0.00 41.83 1.75
164 168 0.536006 GTTGACCTGCTGCCTTGTCT 60.536 55.000 12.42 0.00 0.00 3.41
165 169 0.535780 TTGACCTGCTGCCTTGTCTG 60.536 55.000 12.42 0.00 0.00 3.51
168 172 3.060615 CTGCTGCCTTGTCTGCCC 61.061 66.667 0.00 0.00 0.00 5.36
173 177 3.334054 GCCTTGTCTGCCCTCCCT 61.334 66.667 0.00 0.00 0.00 4.20
186 190 3.316573 CTCCCTTGTCGTCTGGCCC 62.317 68.421 0.00 0.00 0.00 5.80
193 197 3.379445 TCGTCTGGCCCTTCCGTC 61.379 66.667 0.00 0.00 37.80 4.79
204 208 1.313812 CCTTCCGTCTGACGCCTACT 61.314 60.000 23.87 0.00 40.91 2.57
206 210 1.063764 CTTCCGTCTGACGCCTACTAC 59.936 57.143 23.87 0.00 40.91 2.73
207 211 0.251354 TCCGTCTGACGCCTACTACT 59.749 55.000 23.87 0.00 40.91 2.57
234 238 5.644977 ATTGACCCGATTCCTTTTTCTTC 57.355 39.130 0.00 0.00 0.00 2.87
240 244 3.942115 CCGATTCCTTTTTCTTCCTCCTC 59.058 47.826 0.00 0.00 0.00 3.71
260 267 1.447938 CGCAACAAAACAATGTCGAGC 59.552 47.619 0.00 0.00 31.81 5.03
298 306 5.772169 CCACCAGAAAAGGAAAAAGATCTCT 59.228 40.000 0.00 0.00 0.00 3.10
299 307 6.294397 CCACCAGAAAAGGAAAAAGATCTCTG 60.294 42.308 0.00 0.00 0.00 3.35
300 308 5.242615 ACCAGAAAAGGAAAAAGATCTCTGC 59.757 40.000 0.00 0.00 0.00 4.26
301 309 5.242393 CCAGAAAAGGAAAAAGATCTCTGCA 59.758 40.000 0.00 0.00 0.00 4.41
302 310 6.380190 CAGAAAAGGAAAAAGATCTCTGCAG 58.620 40.000 7.63 7.63 0.00 4.41
303 311 4.780275 AAAGGAAAAAGATCTCTGCAGC 57.220 40.909 9.47 0.00 0.00 5.25
304 312 3.717452 AGGAAAAAGATCTCTGCAGCT 57.283 42.857 9.47 0.00 0.00 4.24
305 313 3.608796 AGGAAAAAGATCTCTGCAGCTC 58.391 45.455 9.47 5.76 0.00 4.09
306 314 2.351111 GGAAAAAGATCTCTGCAGCTCG 59.649 50.000 9.47 0.00 0.00 5.03
307 315 2.758736 AAAAGATCTCTGCAGCTCGT 57.241 45.000 9.47 1.13 0.00 4.18
308 316 2.758736 AAAGATCTCTGCAGCTCGTT 57.241 45.000 9.47 7.40 0.00 3.85
342 350 2.828868 GCTGTCCCTGTGACCACA 59.171 61.111 2.63 2.63 43.78 4.17
347 355 2.282462 CCCTGTGACCACAAGCCC 60.282 66.667 4.30 0.00 41.33 5.19
348 356 2.833913 CCCTGTGACCACAAGCCCT 61.834 63.158 4.30 0.00 41.33 5.19
381 389 7.128234 ACAGGAGTAGAAGTAGTACTAGAGG 57.872 44.000 1.87 0.00 30.60 3.69
382 390 6.100134 ACAGGAGTAGAAGTAGTACTAGAGGG 59.900 46.154 1.87 0.00 30.60 4.30
388 396 8.397172 AGTAGAAGTAGTACTAGAGGGGAAAAA 58.603 37.037 1.87 0.00 0.00 1.94
422 430 1.127343 CTTCCCCTCTCCATCTCCAC 58.873 60.000 0.00 0.00 0.00 4.02
428 436 1.118838 CTCTCCATCTCCACCTCCAC 58.881 60.000 0.00 0.00 0.00 4.02
432 440 0.326048 CCATCTCCACCTCCACCTCT 60.326 60.000 0.00 0.00 0.00 3.69
433 441 1.118838 CATCTCCACCTCCACCTCTC 58.881 60.000 0.00 0.00 0.00 3.20
435 443 1.149782 TCTCCACCTCCACCTCTCCT 61.150 60.000 0.00 0.00 0.00 3.69
472 487 3.190874 GAGAGCTTCTTAATCACCCACG 58.809 50.000 0.00 0.00 0.00 4.94
480 495 3.007506 TCTTAATCACCCACGAAAGCAGA 59.992 43.478 0.00 0.00 0.00 4.26
481 496 1.813513 AATCACCCACGAAAGCAGAG 58.186 50.000 0.00 0.00 0.00 3.35
483 498 0.318441 TCACCCACGAAAGCAGAGAG 59.682 55.000 0.00 0.00 0.00 3.20
484 499 0.318441 CACCCACGAAAGCAGAGAGA 59.682 55.000 0.00 0.00 0.00 3.10
485 500 0.605589 ACCCACGAAAGCAGAGAGAG 59.394 55.000 0.00 0.00 0.00 3.20
486 501 0.891373 CCCACGAAAGCAGAGAGAGA 59.109 55.000 0.00 0.00 0.00 3.10
487 502 1.135141 CCCACGAAAGCAGAGAGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
488 503 1.815613 CCACGAAAGCAGAGAGAGAGA 59.184 52.381 0.00 0.00 0.00 3.10
489 504 2.230025 CCACGAAAGCAGAGAGAGAGAA 59.770 50.000 0.00 0.00 0.00 2.87
504 519 5.960811 AGAGAGAGAAAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
507 522 5.032846 AGAGAAAGAGAGAGAGAGAGAGGA 58.967 45.833 0.00 0.00 0.00 3.71
512 527 2.435805 GAGAGAGAGAGAGAGGAGCAGA 59.564 54.545 0.00 0.00 0.00 4.26
553 568 1.048601 AACTGCCGTCTTCAAGGAGA 58.951 50.000 0.00 0.00 0.00 3.71
554 569 0.605589 ACTGCCGTCTTCAAGGAGAG 59.394 55.000 0.00 0.00 0.00 3.20
555 570 0.891373 CTGCCGTCTTCAAGGAGAGA 59.109 55.000 0.00 0.00 0.00 3.10
556 571 0.891373 TGCCGTCTTCAAGGAGAGAG 59.109 55.000 0.00 0.00 0.00 3.20
557 572 1.178276 GCCGTCTTCAAGGAGAGAGA 58.822 55.000 0.00 0.00 0.00 3.10
558 573 1.546476 GCCGTCTTCAAGGAGAGAGAA 59.454 52.381 0.00 0.00 0.00 2.87
559 574 2.028930 GCCGTCTTCAAGGAGAGAGAAA 60.029 50.000 0.00 0.00 0.00 2.52
560 575 3.368948 GCCGTCTTCAAGGAGAGAGAAAT 60.369 47.826 0.00 0.00 0.00 2.17
561 576 4.142138 GCCGTCTTCAAGGAGAGAGAAATA 60.142 45.833 0.00 0.00 0.00 1.40
562 577 5.587289 CCGTCTTCAAGGAGAGAGAAATAG 58.413 45.833 0.00 0.00 0.00 1.73
563 578 5.358442 CCGTCTTCAAGGAGAGAGAAATAGA 59.642 44.000 0.00 0.00 0.00 1.98
582 597 0.258774 AGAGAGAGAGAGCCCACCTC 59.741 60.000 0.00 0.00 41.07 3.85
616 654 1.448540 CCCAACTACTCGCCTGCTG 60.449 63.158 0.00 0.00 0.00 4.41
617 655 1.448540 CCAACTACTCGCCTGCTGG 60.449 63.158 5.03 5.03 0.00 4.85
647 685 0.405585 AACCCCCATTGTGAGGTGAG 59.594 55.000 0.00 0.00 31.45 3.51
648 686 1.304282 CCCCCATTGTGAGGTGAGG 59.696 63.158 0.00 0.00 0.00 3.86
649 687 1.500783 CCCCCATTGTGAGGTGAGGT 61.501 60.000 0.00 0.00 0.00 3.85
650 688 0.322816 CCCCATTGTGAGGTGAGGTG 60.323 60.000 0.00 0.00 0.00 4.00
651 689 0.692476 CCCATTGTGAGGTGAGGTGA 59.308 55.000 0.00 0.00 0.00 4.02
739 783 2.355716 CCGCTTGGTTTATTGGAGGAGA 60.356 50.000 0.00 0.00 0.00 3.71
742 786 4.589908 GCTTGGTTTATTGGAGGAGAAGA 58.410 43.478 0.00 0.00 0.00 2.87
744 788 5.804771 GCTTGGTTTATTGGAGGAGAAGAGT 60.805 44.000 0.00 0.00 0.00 3.24
745 789 6.576442 GCTTGGTTTATTGGAGGAGAAGAGTA 60.576 42.308 0.00 0.00 0.00 2.59
799 854 0.940126 CTCCAACCATGTATCGCTGC 59.060 55.000 0.00 0.00 0.00 5.25
800 855 0.541392 TCCAACCATGTATCGCTGCT 59.459 50.000 0.00 0.00 0.00 4.24
801 856 0.659427 CCAACCATGTATCGCTGCTG 59.341 55.000 0.00 0.00 0.00 4.41
802 857 1.655484 CAACCATGTATCGCTGCTGA 58.345 50.000 0.00 0.00 0.00 4.26
803 858 1.328680 CAACCATGTATCGCTGCTGAC 59.671 52.381 0.00 0.00 0.00 3.51
804 859 0.179073 ACCATGTATCGCTGCTGACC 60.179 55.000 0.00 0.00 0.00 4.02
806 861 0.105593 CATGTATCGCTGCTGACCCT 59.894 55.000 0.00 0.00 0.00 4.34
807 862 0.105593 ATGTATCGCTGCTGACCCTG 59.894 55.000 0.00 0.00 0.00 4.45
808 863 1.884926 GTATCGCTGCTGACCCTGC 60.885 63.158 0.00 0.00 0.00 4.85
838 893 3.711782 CCTCCCCTCCCCTCCCTT 61.712 72.222 0.00 0.00 0.00 3.95
860 915 2.107041 TTTCTTTCGCGGGGAGCTGA 62.107 55.000 6.13 0.00 45.59 4.26
861 916 2.781595 TTCTTTCGCGGGGAGCTGAC 62.782 60.000 6.13 0.00 45.59 3.51
926 982 1.372087 CCATGGCCTGAGCTTTCGAC 61.372 60.000 3.32 0.00 39.73 4.20
933 989 0.034059 CTGAGCTTTCGACTGGTGGT 59.966 55.000 0.00 0.00 0.00 4.16
946 1013 2.747686 GTGGTCGGGGCTTCTTCA 59.252 61.111 0.00 0.00 0.00 3.02
967 1034 2.054140 CTGCGCTCGAGTCCTACTCC 62.054 65.000 15.13 0.00 42.12 3.85
969 1036 1.451567 CGCTCGAGTCCTACTCCCA 60.452 63.158 15.13 0.00 42.12 4.37
1086 1171 2.030274 ACAGGCGTGGTAAATTTCTTGC 60.030 45.455 11.67 0.00 0.00 4.01
1095 1180 6.183360 CGTGGTAAATTTCTTGCCCTCATTAT 60.183 38.462 0.00 0.00 0.00 1.28
1098 1183 7.398618 TGGTAAATTTCTTGCCCTCATTATTCA 59.601 33.333 0.00 0.00 0.00 2.57
1103 1188 4.526970 TCTTGCCCTCATTATTCACTTCC 58.473 43.478 0.00 0.00 0.00 3.46
1115 1200 1.118965 TCACTTCCTCCCTGTTCGCA 61.119 55.000 0.00 0.00 0.00 5.10
1117 1202 1.738099 CTTCCTCCCTGTTCGCACG 60.738 63.158 0.00 0.00 0.00 5.34
1146 1231 7.061752 TCTTCTCTGCGTTAATTTAGCTTTC 57.938 36.000 0.00 0.00 0.00 2.62
1151 1236 7.750458 TCTCTGCGTTAATTTAGCTTTCATTTG 59.250 33.333 0.00 0.00 0.00 2.32
1152 1237 7.589395 TCTGCGTTAATTTAGCTTTCATTTGA 58.411 30.769 0.00 0.00 0.00 2.69
1153 1238 8.243426 TCTGCGTTAATTTAGCTTTCATTTGAT 58.757 29.630 0.00 0.00 0.00 2.57
1154 1239 8.755696 TGCGTTAATTTAGCTTTCATTTGATT 57.244 26.923 0.00 0.00 0.00 2.57
1155 1240 9.202273 TGCGTTAATTTAGCTTTCATTTGATTT 57.798 25.926 0.00 0.00 0.00 2.17
1196 1281 1.749033 CTCTCCCTTGCCCGGATAC 59.251 63.158 0.73 0.00 0.00 2.24
1203 1290 2.654863 CCTTGCCCGGATACAGAATTT 58.345 47.619 0.73 0.00 0.00 1.82
1205 1292 2.051334 TGCCCGGATACAGAATTTGG 57.949 50.000 0.73 0.00 0.00 3.28
1208 1295 1.133792 CCCGGATACAGAATTTGGCCT 60.134 52.381 0.73 0.00 0.00 5.19
1210 1297 2.618709 CCGGATACAGAATTTGGCCTTC 59.381 50.000 3.32 0.00 0.00 3.46
1235 1322 3.004839 GTCTTGTTCCTGCCCTTCTTTTC 59.995 47.826 0.00 0.00 0.00 2.29
1238 1325 2.714250 TGTTCCTGCCCTTCTTTTCCTA 59.286 45.455 0.00 0.00 0.00 2.94
1276 1363 8.178313 TGAAAGAAAGAATTTAGGGGAGAAAC 57.822 34.615 0.00 0.00 39.27 2.78
1283 1370 5.429109 AGAATTTAGGGGAGAAACTAGGACC 59.571 44.000 0.00 0.00 0.00 4.46
1300 1387 0.400594 ACCAGAGTAGTTGGTTGGCC 59.599 55.000 0.00 0.00 46.57 5.36
1351 1440 1.483595 TTGGTGGAGCTCTGTCTGGG 61.484 60.000 14.64 0.00 0.00 4.45
1370 1459 2.456577 GGGGTGCCATAATTCACAAGT 58.543 47.619 0.00 0.00 35.04 3.16
1371 1460 2.427095 GGGGTGCCATAATTCACAAGTC 59.573 50.000 0.00 0.00 35.04 3.01
1374 1469 4.576463 GGGTGCCATAATTCACAAGTCTAG 59.424 45.833 0.00 0.00 35.04 2.43
1395 1490 2.282040 GCTTGGCTGGACTGCACT 60.282 61.111 3.65 0.00 34.04 4.40
1396 1491 1.900498 GCTTGGCTGGACTGCACTT 60.900 57.895 3.65 0.00 34.04 3.16
1397 1492 1.954528 CTTGGCTGGACTGCACTTG 59.045 57.895 3.65 0.00 34.04 3.16
1398 1493 2.138656 CTTGGCTGGACTGCACTTGC 62.139 60.000 3.65 0.00 42.50 4.01
1399 1494 3.730761 GGCTGGACTGCACTTGCG 61.731 66.667 3.65 0.00 45.83 4.85
1400 1495 2.974698 GCTGGACTGCACTTGCGT 60.975 61.111 0.00 0.00 45.83 5.24
1402 1497 1.595109 CTGGACTGCACTTGCGTGA 60.595 57.895 3.92 0.00 43.97 4.35
1405 1500 1.154338 GACTGCACTTGCGTGATGC 60.154 57.895 3.92 0.00 43.97 3.91
1428 1538 2.111756 CTGCTGCAGTCGTTTTGTTTC 58.888 47.619 21.21 0.00 0.00 2.78
1431 1541 3.242608 TGCTGCAGTCGTTTTGTTTCTAC 60.243 43.478 16.64 0.00 0.00 2.59
1433 1543 4.762809 CTGCAGTCGTTTTGTTTCTACTC 58.237 43.478 5.25 0.00 0.00 2.59
1434 1544 3.558418 TGCAGTCGTTTTGTTTCTACTCC 59.442 43.478 0.00 0.00 0.00 3.85
1435 1545 3.808174 GCAGTCGTTTTGTTTCTACTCCT 59.192 43.478 0.00 0.00 0.00 3.69
1436 1546 4.084485 GCAGTCGTTTTGTTTCTACTCCTC 60.084 45.833 0.00 0.00 0.00 3.71
1437 1547 5.290386 CAGTCGTTTTGTTTCTACTCCTCT 58.710 41.667 0.00 0.00 0.00 3.69
1438 1548 6.444633 CAGTCGTTTTGTTTCTACTCCTCTA 58.555 40.000 0.00 0.00 0.00 2.43
1439 1549 6.362820 CAGTCGTTTTGTTTCTACTCCTCTAC 59.637 42.308 0.00 0.00 0.00 2.59
1440 1550 6.040166 AGTCGTTTTGTTTCTACTCCTCTACA 59.960 38.462 0.00 0.00 0.00 2.74
1441 1551 6.362820 GTCGTTTTGTTTCTACTCCTCTACAG 59.637 42.308 0.00 0.00 0.00 2.74
1442 1552 5.634020 CGTTTTGTTTCTACTCCTCTACAGG 59.366 44.000 0.00 0.00 42.01 4.00
1443 1553 4.803098 TTGTTTCTACTCCTCTACAGGC 57.197 45.455 0.00 0.00 40.12 4.85
1444 1554 3.097614 TGTTTCTACTCCTCTACAGGCC 58.902 50.000 0.00 0.00 40.12 5.19
1445 1555 3.097614 GTTTCTACTCCTCTACAGGCCA 58.902 50.000 5.01 0.00 40.12 5.36
1478 1604 7.489574 TTCACCTATTTTCAATTGCAAAACC 57.510 32.000 1.71 0.00 0.00 3.27
1487 1613 4.325119 TCAATTGCAAAACCATGGGATTG 58.675 39.130 18.09 20.07 0.00 2.67
1489 1615 0.982704 TGCAAAACCATGGGATTGGG 59.017 50.000 24.68 13.64 41.35 4.12
1530 1656 1.093159 CTCCTCCTTGCTTGTCATGC 58.907 55.000 3.79 3.79 0.00 4.06
1531 1657 0.401356 TCCTCCTTGCTTGTCATGCA 59.599 50.000 9.22 9.22 38.80 3.96
1532 1658 1.005097 TCCTCCTTGCTTGTCATGCAT 59.995 47.619 13.62 0.00 40.34 3.96
1533 1659 1.134367 CCTCCTTGCTTGTCATGCATG 59.866 52.381 21.07 21.07 40.34 4.06
1534 1660 3.733236 CCTTGCTTGTCATGCATGG 57.267 52.632 25.97 23.07 45.01 3.66
1543 1669 2.093890 TGTCATGCATGGGTGATTGAC 58.906 47.619 25.97 15.37 38.35 3.18
1657 1783 7.790216 CGGAATTTCAAATTTCGTTTTGTTACC 59.210 33.333 14.51 0.00 37.73 2.85
1658 1784 7.790216 GGAATTTCAAATTTCGTTTTGTTACCG 59.210 33.333 0.00 0.00 37.73 4.02
1659 1785 7.988904 ATTTCAAATTTCGTTTTGTTACCGA 57.011 28.000 0.00 0.00 37.73 4.69
1731 1858 1.204704 GGTATTGTTCCCCTGCTTTGC 59.795 52.381 0.00 0.00 0.00 3.68
1801 1928 6.094464 GTGGGGGTGTTATTCACTTATTGTAC 59.906 42.308 0.00 0.00 45.50 2.90
1802 1929 5.591472 GGGGGTGTTATTCACTTATTGTACC 59.409 44.000 0.00 0.00 45.50 3.34
1803 1930 5.591472 GGGGTGTTATTCACTTATTGTACCC 59.409 44.000 0.00 0.00 45.50 3.69
1804 1931 6.181908 GGGTGTTATTCACTTATTGTACCCA 58.818 40.000 0.00 0.00 45.50 4.51
1805 1932 6.660094 GGGTGTTATTCACTTATTGTACCCAA 59.340 38.462 0.00 0.00 45.50 4.12
1807 1934 8.578151 GGTGTTATTCACTTATTGTACCCAAAA 58.422 33.333 0.00 0.00 45.50 2.44
1808 1935 9.968870 GTGTTATTCACTTATTGTACCCAAAAA 57.031 29.630 0.00 0.00 43.13 1.94
1856 1983 0.723981 GACCGCTTCTGCAATCAGTC 59.276 55.000 0.00 0.00 41.10 3.51
1920 2047 0.608856 ATCACATTGGTTGGCAGCGA 60.609 50.000 0.00 0.00 0.00 4.93
2056 2193 2.969821 TCAACCACCTTTAGCACCAT 57.030 45.000 0.00 0.00 0.00 3.55
2092 2229 2.773993 TCAAAGGGACCATTACCGTC 57.226 50.000 0.00 0.00 0.00 4.79
2221 2361 1.679032 GGACTGCCCAGTGATGTTACC 60.679 57.143 5.53 0.00 42.66 2.85
2274 2414 8.734386 CCTTCATAAGGTAATATGCATTTCCTC 58.266 37.037 3.54 0.00 40.10 3.71
2327 2468 4.261489 GGCGCTAGAAACAGCTACTGTATA 60.261 45.833 7.64 0.00 44.62 1.47
2357 2507 1.056660 AGAACGCCCCAGAAGAAAGA 58.943 50.000 0.00 0.00 0.00 2.52
2407 2562 4.713553 TGTAGTTCAAAGCATCAAGGTGA 58.286 39.130 0.00 0.00 0.00 4.02
2520 2705 9.989869 GTTGTCTTTATTAAGAAGGATAAGCAC 57.010 33.333 4.72 0.00 41.86 4.40
2521 2706 9.959721 TTGTCTTTATTAAGAAGGATAAGCACT 57.040 29.630 0.00 0.00 41.86 4.40
2522 2707 9.601217 TGTCTTTATTAAGAAGGATAAGCACTC 57.399 33.333 0.00 0.00 41.86 3.51
2523 2708 9.047371 GTCTTTATTAAGAAGGATAAGCACTCC 57.953 37.037 0.00 0.00 41.86 3.85
2641 2863 8.837389 ACTGATTTTTCTTACCTTGTACTTGTC 58.163 33.333 0.00 0.00 0.00 3.18
2656 2878 5.706833 TGTACTTGTCGACCTTCACTATACA 59.293 40.000 14.12 7.58 0.00 2.29
2671 2893 5.932303 TCACTATACACTGGCTGTTTTTCTC 59.068 40.000 0.00 0.00 33.91 2.87
2683 2905 5.221441 GGCTGTTTTTCTCCTTAATGTTGGT 60.221 40.000 0.00 0.00 0.00 3.67
2739 2962 2.948979 TGCCGTTCTTGAACAGTTGATT 59.051 40.909 13.05 0.00 0.00 2.57
2764 2987 3.426615 GAGAGTTCAGACCAGGAAGAGA 58.573 50.000 0.00 0.00 0.00 3.10
2794 3017 6.590656 TCAAACTAAATGATATCCCAGGGT 57.409 37.500 5.01 0.00 0.00 4.34
2850 3073 8.306313 TCTGCTATGGAGTGAAAATAGAACTA 57.694 34.615 0.00 0.00 0.00 2.24
2854 3077 9.202273 GCTATGGAGTGAAAATAGAACTATCTG 57.798 37.037 0.00 0.00 37.10 2.90
2857 3080 7.044181 TGGAGTGAAAATAGAACTATCTGCTG 58.956 38.462 0.00 0.00 37.10 4.41
2865 3088 6.857777 ATAGAACTATCTGCTGCAAATGTC 57.142 37.500 3.02 0.00 37.10 3.06
3120 3343 1.095807 GCTGGCCGATAAGGGAACAC 61.096 60.000 0.00 0.00 41.48 3.32
3354 3873 0.038159 GACTCAGTAGGCGCAACAGT 60.038 55.000 10.83 7.26 0.00 3.55
3747 4273 1.516161 TCACTGCTGTTGCTAAGCTG 58.484 50.000 0.00 9.85 43.13 4.24
3864 4390 1.203523 CTAGATGATGGCCTCTACCGC 59.796 57.143 3.32 0.00 0.00 5.68
3870 4396 4.547367 GGCCTCTACCGCGCCATT 62.547 66.667 0.00 0.00 42.52 3.16
3889 4415 5.163754 GCCATTGATGTGTACTTGAAGGTAC 60.164 44.000 0.00 0.00 41.51 3.34
3931 4520 0.939419 GCATCTGCATGACATACGCA 59.061 50.000 0.00 0.99 41.59 5.24
3932 4521 1.333524 GCATCTGCATGACATACGCAC 60.334 52.381 0.00 0.00 41.59 5.34
3934 4523 2.091852 TCTGCATGACATACGCACAA 57.908 45.000 0.00 0.00 0.00 3.33
3935 4524 2.631267 TCTGCATGACATACGCACAAT 58.369 42.857 0.00 0.00 0.00 2.71
3936 4525 2.609002 TCTGCATGACATACGCACAATC 59.391 45.455 0.00 0.00 0.00 2.67
3937 4526 2.610833 CTGCATGACATACGCACAATCT 59.389 45.455 0.00 0.00 0.00 2.40
3938 4527 2.352342 TGCATGACATACGCACAATCTG 59.648 45.455 0.00 0.00 0.00 2.90
4006 5361 3.474600 CACATTCCTGGCTATCAGAAGG 58.525 50.000 0.00 0.00 46.18 3.46
4665 6314 4.214545 TCGTTTAGGTTTACATGTGCCAAG 59.785 41.667 9.11 0.56 0.00 3.61
4666 6315 4.023536 CGTTTAGGTTTACATGTGCCAAGT 60.024 41.667 9.11 0.00 0.00 3.16
4802 7657 0.874175 TGCAAGTGGTCGTCAGTTCG 60.874 55.000 0.00 0.00 36.93 3.95
4874 7960 8.896744 TGATCATTTGGACTTGTAGATCATTTC 58.103 33.333 0.00 0.00 36.46 2.17
4942 8028 2.205074 GGTCAGTATCATTGGCACGAG 58.795 52.381 0.00 0.00 0.00 4.18
4945 8031 1.935873 CAGTATCATTGGCACGAGTGG 59.064 52.381 5.32 0.00 0.00 4.00
4974 8060 2.038557 TGTGGACTGAGGAAGTTAAGGC 59.961 50.000 0.00 0.00 40.07 4.35
4982 8068 1.241315 GGAAGTTAAGGCCGCTGCAA 61.241 55.000 1.55 0.00 40.13 4.08
4983 8069 0.596082 GAAGTTAAGGCCGCTGCAAA 59.404 50.000 1.55 0.00 40.13 3.68
5093 8179 3.550842 GGTCAATGCAAAGAACCTGTGAC 60.551 47.826 0.00 0.00 34.71 3.67
5094 8180 3.066621 GTCAATGCAAAGAACCTGTGACA 59.933 43.478 0.00 0.00 35.37 3.58
5237 8340 5.772169 AGAAACCAGAGGGAAATCTCTTTTG 59.228 40.000 0.00 0.00 41.76 2.44
5240 8343 5.561679 ACCAGAGGGAAATCTCTTTTGTAC 58.438 41.667 0.00 0.00 41.76 2.90
5241 8344 5.310857 ACCAGAGGGAAATCTCTTTTGTACT 59.689 40.000 0.00 0.00 41.76 2.73
5242 8345 6.183361 ACCAGAGGGAAATCTCTTTTGTACTT 60.183 38.462 0.00 0.00 41.76 2.24
5243 8346 6.717084 CCAGAGGGAAATCTCTTTTGTACTTT 59.283 38.462 0.00 0.00 41.76 2.66
5244 8347 7.883311 CCAGAGGGAAATCTCTTTTGTACTTTA 59.117 37.037 0.00 0.00 41.76 1.85
5298 8401 3.122297 GCTCAGCAGACAGTGTGATATC 58.878 50.000 0.00 0.00 0.00 1.63
5299 8402 3.181477 GCTCAGCAGACAGTGTGATATCT 60.181 47.826 0.00 0.00 0.00 1.98
5300 8403 4.609947 CTCAGCAGACAGTGTGATATCTC 58.390 47.826 0.00 0.63 0.00 2.75
5301 8404 4.276642 TCAGCAGACAGTGTGATATCTCT 58.723 43.478 0.00 0.00 0.00 3.10
5302 8405 5.440610 TCAGCAGACAGTGTGATATCTCTA 58.559 41.667 0.00 0.00 0.00 2.43
5303 8406 5.298026 TCAGCAGACAGTGTGATATCTCTAC 59.702 44.000 0.00 0.85 0.00 2.59
5304 8407 5.299028 CAGCAGACAGTGTGATATCTCTACT 59.701 44.000 0.00 3.13 0.00 2.57
5305 8408 5.530915 AGCAGACAGTGTGATATCTCTACTC 59.469 44.000 0.00 0.00 0.00 2.59
5306 8409 5.278266 GCAGACAGTGTGATATCTCTACTCC 60.278 48.000 0.00 1.35 0.00 3.85
5307 8410 6.061441 CAGACAGTGTGATATCTCTACTCCT 58.939 44.000 0.00 3.27 0.00 3.69
5308 8411 7.220740 CAGACAGTGTGATATCTCTACTCCTA 58.779 42.308 0.00 0.00 0.00 2.94
5309 8412 7.882791 CAGACAGTGTGATATCTCTACTCCTAT 59.117 40.741 0.00 0.00 0.00 2.57
5310 8413 9.106977 AGACAGTGTGATATCTCTACTCCTATA 57.893 37.037 0.00 0.00 0.00 1.31
5311 8414 9.727859 GACAGTGTGATATCTCTACTCCTATAA 57.272 37.037 0.00 0.00 0.00 0.98
5330 8433 9.631257 TCCTATAAAAAGCTGAATTGATGATGA 57.369 29.630 0.00 0.00 0.00 2.92
5335 8438 8.648557 AAAAAGCTGAATTGATGATGATGATG 57.351 30.769 0.00 0.00 0.00 3.07
5338 8441 4.917998 GCTGAATTGATGATGATGATGTGC 59.082 41.667 0.00 0.00 0.00 4.57
5341 8444 5.009610 TGAATTGATGATGATGATGTGCCTG 59.990 40.000 0.00 0.00 0.00 4.85
5344 8447 3.118186 TGATGATGATGATGTGCCTGTCA 60.118 43.478 0.00 0.00 0.00 3.58
5345 8448 3.570912 TGATGATGATGTGCCTGTCAT 57.429 42.857 0.00 0.00 37.76 3.06
5353 8456 2.885135 TGTGCCTGTCATCCTTCATT 57.115 45.000 0.00 0.00 0.00 2.57
5354 8457 3.159213 TGTGCCTGTCATCCTTCATTT 57.841 42.857 0.00 0.00 0.00 2.32
5355 8458 4.299586 TGTGCCTGTCATCCTTCATTTA 57.700 40.909 0.00 0.00 0.00 1.40
5356 8459 4.009675 TGTGCCTGTCATCCTTCATTTAC 58.990 43.478 0.00 0.00 0.00 2.01
5357 8460 4.009675 GTGCCTGTCATCCTTCATTTACA 58.990 43.478 0.00 0.00 0.00 2.41
5359 8462 4.458989 TGCCTGTCATCCTTCATTTACAAC 59.541 41.667 0.00 0.00 0.00 3.32
5360 8463 4.142381 GCCTGTCATCCTTCATTTACAACC 60.142 45.833 0.00 0.00 0.00 3.77
5363 8466 6.153340 CCTGTCATCCTTCATTTACAACCATT 59.847 38.462 0.00 0.00 0.00 3.16
5365 8468 6.128035 TGTCATCCTTCATTTACAACCATTCG 60.128 38.462 0.00 0.00 0.00 3.34
5366 8469 6.093495 GTCATCCTTCATTTACAACCATTCGA 59.907 38.462 0.00 0.00 0.00 3.71
5368 8471 7.990314 TCATCCTTCATTTACAACCATTCGATA 59.010 33.333 0.00 0.00 0.00 2.92
5369 8472 8.786898 CATCCTTCATTTACAACCATTCGATAT 58.213 33.333 0.00 0.00 0.00 1.63
5371 8474 9.268268 TCCTTCATTTACAACCATTCGATATAC 57.732 33.333 0.00 0.00 0.00 1.47
5372 8475 9.051679 CCTTCATTTACAACCATTCGATATACA 57.948 33.333 0.00 0.00 0.00 2.29
5375 8478 9.214957 TCATTTACAACCATTCGATATACATCC 57.785 33.333 0.00 0.00 0.00 3.51
5376 8479 8.998377 CATTTACAACCATTCGATATACATCCA 58.002 33.333 0.00 0.00 0.00 3.41
5377 8480 8.966069 TTTACAACCATTCGATATACATCCAA 57.034 30.769 0.00 0.00 0.00 3.53
5378 8481 6.861065 ACAACCATTCGATATACATCCAAC 57.139 37.500 0.00 0.00 0.00 3.77
5379 8482 5.465390 ACAACCATTCGATATACATCCAACG 59.535 40.000 0.00 0.00 0.00 4.10
5380 8483 3.994392 ACCATTCGATATACATCCAACGC 59.006 43.478 0.00 0.00 0.00 4.84
5381 8484 3.993736 CCATTCGATATACATCCAACGCA 59.006 43.478 0.00 0.00 0.00 5.24
5382 8485 4.631377 CCATTCGATATACATCCAACGCAT 59.369 41.667 0.00 0.00 0.00 4.73
5383 8486 5.220472 CCATTCGATATACATCCAACGCATC 60.220 44.000 0.00 0.00 0.00 3.91
5384 8487 4.783764 TCGATATACATCCAACGCATCT 57.216 40.909 0.00 0.00 0.00 2.90
5385 8488 4.485163 TCGATATACATCCAACGCATCTG 58.515 43.478 0.00 0.00 0.00 2.90
5386 8489 4.217550 TCGATATACATCCAACGCATCTGA 59.782 41.667 0.00 0.00 0.00 3.27
5387 8490 4.560427 CGATATACATCCAACGCATCTGAG 59.440 45.833 0.00 0.00 0.00 3.35
5388 8491 5.619981 CGATATACATCCAACGCATCTGAGA 60.620 44.000 0.00 0.00 0.00 3.27
5389 8492 2.015736 ACATCCAACGCATCTGAGAC 57.984 50.000 0.00 0.00 0.00 3.36
5390 8493 1.276138 ACATCCAACGCATCTGAGACA 59.724 47.619 0.00 0.00 0.00 3.41
5391 8494 2.289631 ACATCCAACGCATCTGAGACAA 60.290 45.455 0.00 0.00 0.00 3.18
5392 8495 2.084610 TCCAACGCATCTGAGACAAG 57.915 50.000 0.00 0.00 0.00 3.16
5393 8496 0.445436 CCAACGCATCTGAGACAAGC 59.555 55.000 0.00 0.00 0.00 4.01
5394 8497 1.436600 CAACGCATCTGAGACAAGCT 58.563 50.000 0.00 0.00 0.00 3.74
5395 8498 2.610433 CAACGCATCTGAGACAAGCTA 58.390 47.619 0.00 0.00 0.00 3.32
5396 8499 3.193263 CAACGCATCTGAGACAAGCTAT 58.807 45.455 0.00 0.00 0.00 2.97
5397 8500 2.819115 ACGCATCTGAGACAAGCTATG 58.181 47.619 0.00 0.00 0.00 2.23
5409 8512 4.916983 ACAAGCTATGTCAGTTTTGCAA 57.083 36.364 0.00 0.00 37.96 4.08
5410 8513 5.261209 ACAAGCTATGTCAGTTTTGCAAA 57.739 34.783 8.05 8.05 37.96 3.68
5411 8514 5.659463 ACAAGCTATGTCAGTTTTGCAAAA 58.341 33.333 20.46 20.46 37.96 2.44
5412 8515 6.105333 ACAAGCTATGTCAGTTTTGCAAAAA 58.895 32.000 25.40 10.76 37.96 1.94
5413 8516 6.256321 ACAAGCTATGTCAGTTTTGCAAAAAG 59.744 34.615 25.40 19.90 37.96 2.27
5414 8517 6.147864 AGCTATGTCAGTTTTGCAAAAAGA 57.852 33.333 25.40 21.67 0.00 2.52
5415 8518 5.979517 AGCTATGTCAGTTTTGCAAAAAGAC 59.020 36.000 31.75 31.75 36.52 3.01
5416 8519 5.175673 GCTATGTCAGTTTTGCAAAAAGACC 59.824 40.000 33.32 23.14 35.79 3.85
5417 8520 3.855858 TGTCAGTTTTGCAAAAAGACCC 58.144 40.909 33.32 21.20 35.79 4.46
5418 8521 3.194861 GTCAGTTTTGCAAAAAGACCCC 58.805 45.455 30.06 18.24 33.04 4.95
5419 8522 2.169561 TCAGTTTTGCAAAAAGACCCCC 59.830 45.455 25.40 11.66 0.00 5.40
5420 8523 1.138069 AGTTTTGCAAAAAGACCCCCG 59.862 47.619 25.40 0.00 0.00 5.73
5421 8524 1.134640 GTTTTGCAAAAAGACCCCCGT 60.135 47.619 25.40 0.00 0.00 5.28
5422 8525 2.068834 TTTGCAAAAAGACCCCCGTA 57.931 45.000 10.02 0.00 0.00 4.02
5423 8526 1.320507 TTGCAAAAAGACCCCCGTAC 58.679 50.000 0.00 0.00 0.00 3.67
5424 8527 0.475044 TGCAAAAAGACCCCCGTACT 59.525 50.000 0.00 0.00 0.00 2.73
5425 8528 1.162698 GCAAAAAGACCCCCGTACTC 58.837 55.000 0.00 0.00 0.00 2.59
5426 8529 1.817357 CAAAAAGACCCCCGTACTCC 58.183 55.000 0.00 0.00 0.00 3.85
5427 8530 1.072648 CAAAAAGACCCCCGTACTCCA 59.927 52.381 0.00 0.00 0.00 3.86
5428 8531 0.689055 AAAAGACCCCCGTACTCCAC 59.311 55.000 0.00 0.00 0.00 4.02
5429 8532 0.178912 AAAGACCCCCGTACTCCACT 60.179 55.000 0.00 0.00 0.00 4.00
5430 8533 0.614134 AAGACCCCCGTACTCCACTC 60.614 60.000 0.00 0.00 0.00 3.51
5431 8534 2.362120 ACCCCCGTACTCCACTCG 60.362 66.667 0.00 0.00 0.00 4.18
5432 8535 3.834799 CCCCCGTACTCCACTCGC 61.835 72.222 0.00 0.00 0.00 5.03
5433 8536 2.754658 CCCCGTACTCCACTCGCT 60.755 66.667 0.00 0.00 0.00 4.93
5434 8537 2.348888 CCCCGTACTCCACTCGCTT 61.349 63.158 0.00 0.00 0.00 4.68
5435 8538 1.153823 CCCGTACTCCACTCGCTTG 60.154 63.158 0.00 0.00 0.00 4.01
5436 8539 1.585006 CCGTACTCCACTCGCTTGT 59.415 57.895 0.00 0.00 0.00 3.16
5437 8540 0.038526 CCGTACTCCACTCGCTTGTT 60.039 55.000 0.00 0.00 0.00 2.83
5438 8541 1.604693 CCGTACTCCACTCGCTTGTTT 60.605 52.381 0.00 0.00 0.00 2.83
5439 8542 2.352030 CCGTACTCCACTCGCTTGTTTA 60.352 50.000 0.00 0.00 0.00 2.01
5440 8543 2.915463 CGTACTCCACTCGCTTGTTTAG 59.085 50.000 0.00 0.00 0.00 1.85
5441 8544 3.365666 CGTACTCCACTCGCTTGTTTAGA 60.366 47.826 0.00 0.00 0.00 2.10
5442 8545 3.963428 ACTCCACTCGCTTGTTTAGAT 57.037 42.857 0.00 0.00 0.00 1.98
5443 8546 5.448225 CGTACTCCACTCGCTTGTTTAGATA 60.448 44.000 0.00 0.00 0.00 1.98
5444 8547 5.401531 ACTCCACTCGCTTGTTTAGATAA 57.598 39.130 0.00 0.00 0.00 1.75
5445 8548 5.169295 ACTCCACTCGCTTGTTTAGATAAC 58.831 41.667 0.00 0.00 0.00 1.89
5446 8549 4.501071 TCCACTCGCTTGTTTAGATAACC 58.499 43.478 0.00 0.00 0.00 2.85
5447 8550 3.621715 CCACTCGCTTGTTTAGATAACCC 59.378 47.826 0.00 0.00 0.00 4.11
5448 8551 3.621715 CACTCGCTTGTTTAGATAACCCC 59.378 47.826 0.00 0.00 0.00 4.95
5449 8552 3.203716 CTCGCTTGTTTAGATAACCCCC 58.796 50.000 0.00 0.00 0.00 5.40
5450 8553 2.841881 TCGCTTGTTTAGATAACCCCCT 59.158 45.455 0.00 0.00 0.00 4.79
5451 8554 2.943033 CGCTTGTTTAGATAACCCCCTG 59.057 50.000 0.00 0.00 0.00 4.45
5452 8555 2.688446 GCTTGTTTAGATAACCCCCTGC 59.312 50.000 0.00 0.00 0.00 4.85
5453 8556 3.288092 CTTGTTTAGATAACCCCCTGCC 58.712 50.000 0.00 0.00 0.00 4.85
5454 8557 2.568979 TGTTTAGATAACCCCCTGCCT 58.431 47.619 0.00 0.00 0.00 4.75
5455 8558 2.508300 TGTTTAGATAACCCCCTGCCTC 59.492 50.000 0.00 0.00 0.00 4.70
5456 8559 2.778270 GTTTAGATAACCCCCTGCCTCT 59.222 50.000 0.00 0.00 0.00 3.69
5457 8560 2.400467 TAGATAACCCCCTGCCTCTC 57.600 55.000 0.00 0.00 0.00 3.20
5458 8561 0.343372 AGATAACCCCCTGCCTCTCA 59.657 55.000 0.00 0.00 0.00 3.27
5459 8562 0.470341 GATAACCCCCTGCCTCTCAC 59.530 60.000 0.00 0.00 0.00 3.51
5460 8563 1.338136 ATAACCCCCTGCCTCTCACG 61.338 60.000 0.00 0.00 0.00 4.35
5463 8566 4.154347 CCCCTGCCTCTCACGCTC 62.154 72.222 0.00 0.00 0.00 5.03
5464 8567 3.385384 CCCTGCCTCTCACGCTCA 61.385 66.667 0.00 0.00 0.00 4.26
5465 8568 2.183811 CCTGCCTCTCACGCTCAG 59.816 66.667 0.00 0.00 0.00 3.35
5466 8569 2.644212 CCTGCCTCTCACGCTCAGT 61.644 63.158 0.00 0.00 0.00 3.41
5467 8570 1.153862 CTGCCTCTCACGCTCAGTC 60.154 63.158 0.00 0.00 0.00 3.51
5468 8571 1.871126 CTGCCTCTCACGCTCAGTCA 61.871 60.000 0.00 0.00 0.00 3.41
5469 8572 1.253593 TGCCTCTCACGCTCAGTCAT 61.254 55.000 0.00 0.00 0.00 3.06
5470 8573 0.527385 GCCTCTCACGCTCAGTCATC 60.527 60.000 0.00 0.00 0.00 2.92
5471 8574 1.102154 CCTCTCACGCTCAGTCATCT 58.898 55.000 0.00 0.00 0.00 2.90
5472 8575 1.065401 CCTCTCACGCTCAGTCATCTC 59.935 57.143 0.00 0.00 0.00 2.75
5473 8576 2.016318 CTCTCACGCTCAGTCATCTCT 58.984 52.381 0.00 0.00 0.00 3.10
5474 8577 2.013400 TCTCACGCTCAGTCATCTCTC 58.987 52.381 0.00 0.00 0.00 3.20
5475 8578 1.065401 CTCACGCTCAGTCATCTCTCC 59.935 57.143 0.00 0.00 0.00 3.71
5476 8579 0.102120 CACGCTCAGTCATCTCTCCC 59.898 60.000 0.00 0.00 0.00 4.30
5477 8580 0.033601 ACGCTCAGTCATCTCTCCCT 60.034 55.000 0.00 0.00 0.00 4.20
5478 8581 0.667993 CGCTCAGTCATCTCTCCCTC 59.332 60.000 0.00 0.00 0.00 4.30
5479 8582 1.750332 CGCTCAGTCATCTCTCCCTCT 60.750 57.143 0.00 0.00 0.00 3.69
5480 8583 1.956477 GCTCAGTCATCTCTCCCTCTC 59.044 57.143 0.00 0.00 0.00 3.20
5481 8584 2.686416 GCTCAGTCATCTCTCCCTCTCA 60.686 54.545 0.00 0.00 0.00 3.27
5482 8585 2.951642 CTCAGTCATCTCTCCCTCTCAC 59.048 54.545 0.00 0.00 0.00 3.51
5483 8586 2.580322 TCAGTCATCTCTCCCTCTCACT 59.420 50.000 0.00 0.00 0.00 3.41
5484 8587 3.011144 TCAGTCATCTCTCCCTCTCACTT 59.989 47.826 0.00 0.00 0.00 3.16
5485 8588 3.381272 CAGTCATCTCTCCCTCTCACTTC 59.619 52.174 0.00 0.00 0.00 3.01
5486 8589 2.357637 GTCATCTCTCCCTCTCACTTCG 59.642 54.545 0.00 0.00 0.00 3.79
5487 8590 2.025793 TCATCTCTCCCTCTCACTTCGT 60.026 50.000 0.00 0.00 0.00 3.85
5488 8591 2.116827 TCTCTCCCTCTCACTTCGTC 57.883 55.000 0.00 0.00 0.00 4.20
5489 8592 1.631388 TCTCTCCCTCTCACTTCGTCT 59.369 52.381 0.00 0.00 0.00 4.18
5490 8593 2.838813 TCTCTCCCTCTCACTTCGTCTA 59.161 50.000 0.00 0.00 0.00 2.59
5491 8594 3.118555 TCTCTCCCTCTCACTTCGTCTAG 60.119 52.174 0.00 0.00 0.00 2.43
5492 8595 1.673920 CTCCCTCTCACTTCGTCTAGC 59.326 57.143 0.00 0.00 0.00 3.42
5493 8596 0.741915 CCCTCTCACTTCGTCTAGCC 59.258 60.000 0.00 0.00 0.00 3.93
5494 8597 1.464734 CCTCTCACTTCGTCTAGCCA 58.535 55.000 0.00 0.00 0.00 4.75
5495 8598 2.028130 CCTCTCACTTCGTCTAGCCAT 58.972 52.381 0.00 0.00 0.00 4.40
5496 8599 2.034053 CCTCTCACTTCGTCTAGCCATC 59.966 54.545 0.00 0.00 0.00 3.51
5497 8600 2.948979 CTCTCACTTCGTCTAGCCATCT 59.051 50.000 0.00 0.00 0.00 2.90
5498 8601 2.946329 TCTCACTTCGTCTAGCCATCTC 59.054 50.000 0.00 0.00 0.00 2.75
5499 8602 2.685388 CTCACTTCGTCTAGCCATCTCA 59.315 50.000 0.00 0.00 0.00 3.27
5500 8603 2.685388 TCACTTCGTCTAGCCATCTCAG 59.315 50.000 0.00 0.00 0.00 3.35
5501 8604 2.685388 CACTTCGTCTAGCCATCTCAGA 59.315 50.000 0.00 0.00 0.00 3.27
5502 8605 3.129462 CACTTCGTCTAGCCATCTCAGAA 59.871 47.826 0.00 0.00 0.00 3.02
5503 8606 3.764434 ACTTCGTCTAGCCATCTCAGAAA 59.236 43.478 0.00 0.00 0.00 2.52
5504 8607 4.220821 ACTTCGTCTAGCCATCTCAGAAAA 59.779 41.667 0.00 0.00 0.00 2.29
5505 8608 4.801330 TCGTCTAGCCATCTCAGAAAAA 57.199 40.909 0.00 0.00 0.00 1.94
5527 8630 6.394345 AAAACAATAAGGATCTGGAGAGGT 57.606 37.500 0.00 0.00 0.00 3.85
5528 8631 5.622346 AACAATAAGGATCTGGAGAGGTC 57.378 43.478 0.00 0.00 0.00 3.85
5529 8632 3.639094 ACAATAAGGATCTGGAGAGGTCG 59.361 47.826 0.00 0.00 28.76 4.79
5530 8633 1.693627 TAAGGATCTGGAGAGGTCGC 58.306 55.000 0.00 0.00 28.76 5.19
5531 8634 1.045911 AAGGATCTGGAGAGGTCGCC 61.046 60.000 0.00 0.00 36.28 5.54
5532 8635 2.725008 GATCTGGAGAGGTCGCCG 59.275 66.667 0.00 0.00 38.78 6.46
5533 8636 3.492311 GATCTGGAGAGGTCGCCGC 62.492 68.421 0.00 0.00 38.78 6.53
5534 8637 4.742649 TCTGGAGAGGTCGCCGCT 62.743 66.667 2.09 2.09 38.78 5.52
5535 8638 3.764466 CTGGAGAGGTCGCCGCTT 61.764 66.667 3.92 0.00 38.78 4.68
5536 8639 3.302347 CTGGAGAGGTCGCCGCTTT 62.302 63.158 3.92 0.00 38.78 3.51
5537 8640 2.509561 GGAGAGGTCGCCGCTTTC 60.510 66.667 3.92 0.00 32.83 2.62
5538 8641 2.881352 GAGAGGTCGCCGCTTTCG 60.881 66.667 3.92 0.00 32.83 3.46
5559 8662 4.410400 CCCGTCTGCCCCCAACTC 62.410 72.222 0.00 0.00 0.00 3.01
5560 8663 4.410400 CCGTCTGCCCCCAACTCC 62.410 72.222 0.00 0.00 0.00 3.85
5561 8664 3.322466 CGTCTGCCCCCAACTCCT 61.322 66.667 0.00 0.00 0.00 3.69
5562 8665 2.671682 GTCTGCCCCCAACTCCTC 59.328 66.667 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 9.275572 TGGTGGGAAATAAATTAGAGTAGTAGT 57.724 33.333 0.00 0.00 0.00 2.73
17 18 9.990868 AAATGGTGGGAAATAAATTAGAGTAGT 57.009 29.630 0.00 0.00 0.00 2.73
20 21 7.068226 CGGAAATGGTGGGAAATAAATTAGAGT 59.932 37.037 0.00 0.00 0.00 3.24
40 41 0.664761 CCATCGATTGCAGCGGAAAT 59.335 50.000 10.53 0.00 0.00 2.17
52 53 2.367202 ACGGCTGGTTCCCATCGAT 61.367 57.895 11.35 0.00 35.32 3.59
62 63 2.629656 GCAGAAATGCACGGCTGGT 61.630 57.895 11.91 0.00 34.41 4.00
83 84 2.179018 CAGGCGGAAATGTTGCGG 59.821 61.111 4.10 0.00 45.09 5.69
85 86 1.154225 CGACAGGCGGAAATGTTGC 60.154 57.895 0.00 0.00 36.03 4.17
86 87 0.165944 GTCGACAGGCGGAAATGTTG 59.834 55.000 11.55 0.00 41.33 3.33
87 88 0.953960 GGTCGACAGGCGGAAATGTT 60.954 55.000 18.91 0.00 41.33 2.71
88 89 1.375523 GGTCGACAGGCGGAAATGT 60.376 57.895 18.91 0.00 41.33 2.71
89 90 2.106683 GGGTCGACAGGCGGAAATG 61.107 63.158 18.91 0.00 41.33 2.32
90 91 2.119484 TTGGGTCGACAGGCGGAAAT 62.119 55.000 18.91 0.00 41.33 2.17
91 92 2.809307 TTGGGTCGACAGGCGGAAA 61.809 57.895 18.91 0.00 41.33 3.13
93 94 3.998672 GTTGGGTCGACAGGCGGA 61.999 66.667 18.91 0.00 41.33 5.54
95 96 3.818121 TTGGTTGGGTCGACAGGCG 62.818 63.158 18.91 0.00 42.69 5.52
96 97 0.893727 ATTTGGTTGGGTCGACAGGC 60.894 55.000 18.91 4.06 0.00 4.85
97 98 2.483014 TATTTGGTTGGGTCGACAGG 57.517 50.000 18.91 0.00 0.00 4.00
98 99 4.457603 TCAATTATTTGGTTGGGTCGACAG 59.542 41.667 18.91 0.00 33.44 3.51
99 100 4.399219 TCAATTATTTGGTTGGGTCGACA 58.601 39.130 18.91 0.00 33.44 4.35
100 101 5.576447 ATCAATTATTTGGTTGGGTCGAC 57.424 39.130 7.13 7.13 33.44 4.20
101 102 5.960113 CAATCAATTATTTGGTTGGGTCGA 58.040 37.500 13.28 0.00 45.99 4.20
126 127 8.499406 AGGTCAACTAATGGCTGGTTATTATTA 58.501 33.333 0.00 0.00 32.85 0.98
128 129 6.772716 CAGGTCAACTAATGGCTGGTTATTAT 59.227 38.462 0.00 0.00 32.85 1.28
135 139 1.098050 GCAGGTCAACTAATGGCTGG 58.902 55.000 0.00 0.00 32.85 4.85
138 142 0.453390 GCAGCAGGTCAACTAATGGC 59.547 55.000 0.00 0.00 0.00 4.40
164 168 2.203788 AGACGACAAGGGAGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
165 169 2.266055 CAGACGACAAGGGAGGGC 59.734 66.667 0.00 0.00 0.00 5.19
168 172 2.266055 GGCCAGACGACAAGGGAG 59.734 66.667 0.00 0.00 0.00 4.30
173 177 2.747686 GGAAGGGCCAGACGACAA 59.252 61.111 6.18 0.00 36.34 3.18
186 190 1.063764 GTAGTAGGCGTCAGACGGAAG 59.936 57.143 24.13 0.00 42.82 3.46
193 197 4.097437 TCAATTGGTAGTAGTAGGCGTCAG 59.903 45.833 5.42 0.00 0.00 3.51
204 208 4.035112 AGGAATCGGGTCAATTGGTAGTA 58.965 43.478 5.42 0.00 0.00 1.82
206 210 3.560636 AGGAATCGGGTCAATTGGTAG 57.439 47.619 5.42 0.00 0.00 3.18
207 211 4.310022 AAAGGAATCGGGTCAATTGGTA 57.690 40.909 5.42 0.00 0.00 3.25
234 238 2.034558 ACATTGTTTTGTTGCGAGGAGG 59.965 45.455 0.00 0.00 0.00 4.30
240 244 1.447938 GCTCGACATTGTTTTGTTGCG 59.552 47.619 0.00 0.00 32.05 4.85
285 292 2.351111 CGAGCTGCAGAGATCTTTTTCC 59.649 50.000 20.43 0.00 32.01 3.13
298 306 0.602638 CTGGGTGTAAACGAGCTGCA 60.603 55.000 1.02 0.00 0.00 4.41
299 307 0.602905 ACTGGGTGTAAACGAGCTGC 60.603 55.000 0.00 0.00 0.00 5.25
300 308 1.270094 TGACTGGGTGTAAACGAGCTG 60.270 52.381 0.00 0.00 0.00 4.24
301 309 1.045407 TGACTGGGTGTAAACGAGCT 58.955 50.000 0.00 0.00 0.00 4.09
302 310 1.732259 CATGACTGGGTGTAAACGAGC 59.268 52.381 0.00 0.00 0.00 5.03
303 311 2.346803 CCATGACTGGGTGTAAACGAG 58.653 52.381 0.00 0.00 39.04 4.18
304 312 1.609580 GCCATGACTGGGTGTAAACGA 60.610 52.381 0.00 0.00 43.36 3.85
305 313 0.802494 GCCATGACTGGGTGTAAACG 59.198 55.000 0.00 0.00 43.36 3.60
306 314 0.802494 CGCCATGACTGGGTGTAAAC 59.198 55.000 0.00 0.00 43.36 2.01
307 315 0.958382 GCGCCATGACTGGGTGTAAA 60.958 55.000 0.00 0.00 43.36 2.01
308 316 1.376683 GCGCCATGACTGGGTGTAA 60.377 57.895 0.00 0.00 43.36 2.41
355 363 8.873144 CCTCTAGTACTACTTCTACTCCTGTAT 58.127 40.741 0.00 0.00 0.00 2.29
356 364 7.289782 CCCTCTAGTACTACTTCTACTCCTGTA 59.710 44.444 0.00 0.00 0.00 2.74
357 365 6.100134 CCCTCTAGTACTACTTCTACTCCTGT 59.900 46.154 0.00 0.00 0.00 4.00
358 366 6.464749 CCCCTCTAGTACTACTTCTACTCCTG 60.465 50.000 0.00 0.00 0.00 3.86
360 368 5.606329 TCCCCTCTAGTACTACTTCTACTCC 59.394 48.000 0.00 0.00 0.00 3.85
361 369 6.745794 TCCCCTCTAGTACTACTTCTACTC 57.254 45.833 0.00 0.00 0.00 2.59
422 430 3.320610 TGATTAGAGGAGAGGTGGAGG 57.679 52.381 0.00 0.00 0.00 4.30
428 436 3.389656 GGGGAGTTTGATTAGAGGAGAGG 59.610 52.174 0.00 0.00 0.00 3.69
432 440 3.031736 CTCGGGGAGTTTGATTAGAGGA 58.968 50.000 0.00 0.00 0.00 3.71
433 441 3.031736 TCTCGGGGAGTTTGATTAGAGG 58.968 50.000 0.00 0.00 0.00 3.69
435 443 2.431057 GCTCTCGGGGAGTTTGATTAGA 59.569 50.000 6.77 0.00 43.62 2.10
455 470 3.426292 GCTTTCGTGGGTGATTAAGAAGC 60.426 47.826 0.00 0.00 0.00 3.86
472 487 5.415701 TCTCTCTTTCTCTCTCTCTGCTTTC 59.584 44.000 0.00 0.00 0.00 2.62
480 495 5.960811 TCTCTCTCTCTCTCTTTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
481 496 6.227298 TCTCTCTCTCTCTCTTTCTCTCTC 57.773 45.833 0.00 0.00 0.00 3.20
483 498 5.129485 TCCTCTCTCTCTCTCTCTTTCTCTC 59.871 48.000 0.00 0.00 0.00 3.20
484 499 5.032846 TCCTCTCTCTCTCTCTCTTTCTCT 58.967 45.833 0.00 0.00 0.00 3.10
485 500 5.359194 TCCTCTCTCTCTCTCTCTTTCTC 57.641 47.826 0.00 0.00 0.00 2.87
486 501 4.384647 GCTCCTCTCTCTCTCTCTCTTTCT 60.385 50.000 0.00 0.00 0.00 2.52
487 502 3.879892 GCTCCTCTCTCTCTCTCTCTTTC 59.120 52.174 0.00 0.00 0.00 2.62
488 503 3.266772 TGCTCCTCTCTCTCTCTCTCTTT 59.733 47.826 0.00 0.00 0.00 2.52
489 504 2.846206 TGCTCCTCTCTCTCTCTCTCTT 59.154 50.000 0.00 0.00 0.00 2.85
504 519 0.617249 CTTCACCCTCCTCTGCTCCT 60.617 60.000 0.00 0.00 0.00 3.69
507 522 0.178921 TGTCTTCACCCTCCTCTGCT 60.179 55.000 0.00 0.00 0.00 4.24
512 527 3.791320 TCTATTGTGTCTTCACCCTCCT 58.209 45.455 0.00 0.00 43.26 3.69
553 568 5.456763 GGGCTCTCTCTCTCTCTATTTCTCT 60.457 48.000 0.00 0.00 0.00 3.10
554 569 4.762251 GGGCTCTCTCTCTCTCTATTTCTC 59.238 50.000 0.00 0.00 0.00 2.87
555 570 4.167892 TGGGCTCTCTCTCTCTCTATTTCT 59.832 45.833 0.00 0.00 0.00 2.52
556 571 4.278419 GTGGGCTCTCTCTCTCTCTATTTC 59.722 50.000 0.00 0.00 0.00 2.17
557 572 4.215109 GTGGGCTCTCTCTCTCTCTATTT 58.785 47.826 0.00 0.00 0.00 1.40
558 573 3.436470 GGTGGGCTCTCTCTCTCTCTATT 60.436 52.174 0.00 0.00 0.00 1.73
559 574 2.108250 GGTGGGCTCTCTCTCTCTCTAT 59.892 54.545 0.00 0.00 0.00 1.98
560 575 1.493022 GGTGGGCTCTCTCTCTCTCTA 59.507 57.143 0.00 0.00 0.00 2.43
561 576 0.258774 GGTGGGCTCTCTCTCTCTCT 59.741 60.000 0.00 0.00 0.00 3.10
562 577 0.258774 AGGTGGGCTCTCTCTCTCTC 59.741 60.000 0.00 0.00 0.00 3.20
563 578 0.258774 GAGGTGGGCTCTCTCTCTCT 59.741 60.000 1.11 0.00 0.00 3.10
582 597 3.339093 GGTTGGGGGAGGAGGTGG 61.339 72.222 0.00 0.00 0.00 4.61
618 656 3.990141 ATGGGGGTTGGGGAGGAGG 62.990 68.421 0.00 0.00 0.00 4.30
619 657 1.935931 AATGGGGGTTGGGGAGGAG 60.936 63.158 0.00 0.00 0.00 3.69
620 658 2.215758 AATGGGGGTTGGGGAGGA 59.784 61.111 0.00 0.00 0.00 3.71
621 659 2.364160 CAATGGGGGTTGGGGAGG 59.636 66.667 0.00 0.00 0.00 4.30
622 660 1.305213 CACAATGGGGGTTGGGGAG 60.305 63.158 0.00 0.00 33.40 4.30
623 661 1.780488 TCACAATGGGGGTTGGGGA 60.780 57.895 0.00 0.00 33.31 4.81
624 662 1.305213 CTCACAATGGGGGTTGGGG 60.305 63.158 0.00 0.00 33.31 4.96
739 783 2.568956 TGCTGCTGATCCAACTACTCTT 59.431 45.455 0.00 0.00 0.00 2.85
742 786 1.209019 CCTGCTGCTGATCCAACTACT 59.791 52.381 8.20 0.00 0.00 2.57
744 788 0.107508 GCCTGCTGCTGATCCAACTA 60.108 55.000 8.20 0.00 36.87 2.24
745 789 1.378250 GCCTGCTGCTGATCCAACT 60.378 57.895 8.20 0.00 36.87 3.16
777 821 2.111384 AGCGATACATGGTTGGAGACT 58.889 47.619 0.00 0.00 0.00 3.24
817 872 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
821 876 3.289454 AAAGGGAGGGGAGGGGAGG 62.289 68.421 0.00 0.00 0.00 4.30
822 877 1.694525 GAAAGGGAGGGGAGGGGAG 60.695 68.421 0.00 0.00 0.00 4.30
823 878 1.772561 AAGAAAGGGAGGGGAGGGGA 61.773 60.000 0.00 0.00 0.00 4.81
824 879 0.851332 AAAGAAAGGGAGGGGAGGGG 60.851 60.000 0.00 0.00 0.00 4.79
825 880 0.626382 GAAAGAAAGGGAGGGGAGGG 59.374 60.000 0.00 0.00 0.00 4.30
826 881 1.675007 AGAAAGAAAGGGAGGGGAGG 58.325 55.000 0.00 0.00 0.00 4.30
827 882 3.691575 GAAAGAAAGAAAGGGAGGGGAG 58.308 50.000 0.00 0.00 0.00 4.30
828 883 2.039879 CGAAAGAAAGAAAGGGAGGGGA 59.960 50.000 0.00 0.00 0.00 4.81
829 884 2.437413 CGAAAGAAAGAAAGGGAGGGG 58.563 52.381 0.00 0.00 0.00 4.79
830 885 1.813178 GCGAAAGAAAGAAAGGGAGGG 59.187 52.381 0.00 0.00 0.00 4.30
831 886 1.464997 CGCGAAAGAAAGAAAGGGAGG 59.535 52.381 0.00 0.00 0.00 4.30
832 887 1.464997 CCGCGAAAGAAAGAAAGGGAG 59.535 52.381 8.23 0.00 0.00 4.30
833 888 1.519408 CCGCGAAAGAAAGAAAGGGA 58.481 50.000 8.23 0.00 0.00 4.20
838 893 0.953960 GCTCCCCGCGAAAGAAAGAA 60.954 55.000 8.23 0.00 0.00 2.52
926 982 2.804828 GAAGAAGCCCCGACCACCAG 62.805 65.000 0.00 0.00 0.00 4.00
933 989 1.221840 GCAGATGAAGAAGCCCCGA 59.778 57.895 0.00 0.00 0.00 5.14
946 1013 0.464735 AGTAGGACTCGAGCGCAGAT 60.465 55.000 13.61 0.00 0.00 2.90
984 1051 2.442272 ATCCTGGACGACGAGGGG 60.442 66.667 15.11 0.00 41.40 4.79
985 1052 2.786495 CCATCCTGGACGACGAGGG 61.786 68.421 15.11 1.30 40.96 4.30
988 1058 3.458163 GGCCATCCTGGACGACGA 61.458 66.667 0.00 0.00 40.96 4.20
1086 1171 3.718956 AGGGAGGAAGTGAATAATGAGGG 59.281 47.826 0.00 0.00 0.00 4.30
1095 1180 0.034896 GCGAACAGGGAGGAAGTGAA 59.965 55.000 0.00 0.00 0.00 3.18
1098 1183 1.371558 GTGCGAACAGGGAGGAAGT 59.628 57.895 0.00 0.00 0.00 3.01
1103 1188 1.157870 AACAACGTGCGAACAGGGAG 61.158 55.000 0.00 0.00 35.97 4.30
1115 1200 1.935933 AACGCAGAGAAGAACAACGT 58.064 45.000 0.00 0.00 0.00 3.99
1117 1202 6.520104 GCTAAATTAACGCAGAGAAGAACAAC 59.480 38.462 0.00 0.00 0.00 3.32
1146 1231 5.965334 GTGTATGTACCGCAGAAATCAAATG 59.035 40.000 0.00 0.00 0.00 2.32
1151 1236 4.552767 GCATGTGTATGTACCGCAGAAATC 60.553 45.833 0.00 0.00 36.65 2.17
1152 1237 3.312421 GCATGTGTATGTACCGCAGAAAT 59.688 43.478 0.00 0.00 36.65 2.17
1153 1238 2.675844 GCATGTGTATGTACCGCAGAAA 59.324 45.455 0.00 0.00 36.65 2.52
1154 1239 2.093711 AGCATGTGTATGTACCGCAGAA 60.094 45.455 0.00 0.00 36.65 3.02
1155 1240 1.480545 AGCATGTGTATGTACCGCAGA 59.519 47.619 0.00 0.00 36.65 4.26
1196 1281 4.038402 ACAAGACAAGAAGGCCAAATTCTG 59.962 41.667 5.01 3.61 37.10 3.02
1203 1290 1.494721 AGGAACAAGACAAGAAGGCCA 59.505 47.619 5.01 0.00 0.00 5.36
1205 1292 1.268079 GCAGGAACAAGACAAGAAGGC 59.732 52.381 0.00 0.00 0.00 4.35
1208 1295 1.494721 AGGGCAGGAACAAGACAAGAA 59.505 47.619 0.00 0.00 0.00 2.52
1210 1297 1.882623 GAAGGGCAGGAACAAGACAAG 59.117 52.381 0.00 0.00 0.00 3.16
1235 1322 5.407407 TCTTTCAGGTTTCAGCTAGTAGG 57.593 43.478 0.00 0.00 0.00 3.18
1238 1325 5.930135 TCTTTCTTTCAGGTTTCAGCTAGT 58.070 37.500 0.00 0.00 0.00 2.57
1276 1363 3.195825 CCAACCAACTACTCTGGTCCTAG 59.804 52.174 0.00 0.00 46.75 3.02
1283 1370 1.625818 AGAGGCCAACCAACTACTCTG 59.374 52.381 5.01 0.00 39.06 3.35
1300 1387 2.276732 TTGAGCAGAAACCCCAAGAG 57.723 50.000 0.00 0.00 0.00 2.85
1351 1440 3.356290 AGACTTGTGAATTATGGCACCC 58.644 45.455 0.00 0.00 34.19 4.61
1370 1459 0.036010 GTCCAGCCAAGCAAGCTAGA 60.036 55.000 0.00 0.00 38.95 2.43
1371 1460 0.035630 AGTCCAGCCAAGCAAGCTAG 60.036 55.000 0.00 0.00 38.95 3.42
1374 1469 2.960170 CAGTCCAGCCAAGCAAGC 59.040 61.111 0.00 0.00 0.00 4.01
1379 1474 1.954528 CAAGTGCAGTCCAGCCAAG 59.045 57.895 0.00 0.00 0.00 3.61
1405 1500 1.265095 ACAAAACGACTGCAGCAGATG 59.735 47.619 29.70 21.00 35.18 2.90
1407 1502 1.378531 AACAAAACGACTGCAGCAGA 58.621 45.000 29.70 0.00 35.18 4.26
1408 1503 2.111756 GAAACAAAACGACTGCAGCAG 58.888 47.619 21.54 21.54 37.52 4.24
1409 1504 1.742831 AGAAACAAAACGACTGCAGCA 59.257 42.857 15.27 0.00 0.00 4.41
1410 1505 2.475200 AGAAACAAAACGACTGCAGC 57.525 45.000 15.27 5.81 0.00 5.25
1411 1506 4.318831 GGAGTAGAAACAAAACGACTGCAG 60.319 45.833 13.48 13.48 32.62 4.41
1412 1507 3.558418 GGAGTAGAAACAAAACGACTGCA 59.442 43.478 0.00 0.00 32.62 4.41
1413 1508 3.808174 AGGAGTAGAAACAAAACGACTGC 59.192 43.478 0.00 0.00 32.54 4.40
1415 1510 5.532664 AGAGGAGTAGAAACAAAACGACT 57.467 39.130 0.00 0.00 0.00 4.18
1416 1511 6.211515 TGTAGAGGAGTAGAAACAAAACGAC 58.788 40.000 0.00 0.00 0.00 4.34
1417 1512 6.395426 TGTAGAGGAGTAGAAACAAAACGA 57.605 37.500 0.00 0.00 0.00 3.85
1428 1538 2.445682 AGTGGCCTGTAGAGGAGTAG 57.554 55.000 10.79 0.00 42.93 2.57
1431 1541 1.902508 TGAAAGTGGCCTGTAGAGGAG 59.097 52.381 10.79 0.00 42.93 3.69
1433 1543 4.696479 ATATGAAAGTGGCCTGTAGAGG 57.304 45.455 3.32 0.31 43.19 3.69
1434 1544 5.525378 GTGAATATGAAAGTGGCCTGTAGAG 59.475 44.000 3.32 0.00 0.00 2.43
1435 1545 5.428253 GTGAATATGAAAGTGGCCTGTAGA 58.572 41.667 3.32 0.00 0.00 2.59
1436 1546 4.576463 GGTGAATATGAAAGTGGCCTGTAG 59.424 45.833 3.32 0.00 0.00 2.74
1437 1547 4.227300 AGGTGAATATGAAAGTGGCCTGTA 59.773 41.667 3.32 0.00 0.00 2.74
1438 1548 3.010584 AGGTGAATATGAAAGTGGCCTGT 59.989 43.478 3.32 0.00 0.00 4.00
1439 1549 3.624777 AGGTGAATATGAAAGTGGCCTG 58.375 45.455 3.32 0.00 0.00 4.85
1440 1550 5.653255 ATAGGTGAATATGAAAGTGGCCT 57.347 39.130 3.32 0.00 0.00 5.19
1441 1551 6.715347 AAATAGGTGAATATGAAAGTGGCC 57.285 37.500 0.00 0.00 0.00 5.36
1442 1552 7.771183 TGAAAATAGGTGAATATGAAAGTGGC 58.229 34.615 0.00 0.00 0.00 5.01
1478 1604 2.092212 ACTCTGCTAACCCAATCCCATG 60.092 50.000 0.00 0.00 0.00 3.66
1487 1613 4.017177 AGTAAACCAACTCTGCTAACCC 57.983 45.455 0.00 0.00 0.00 4.11
1489 1615 4.515567 AGCAAGTAAACCAACTCTGCTAAC 59.484 41.667 10.07 0.00 39.67 2.34
1530 1656 6.930164 TGAATTTTCTTTGTCAATCACCCATG 59.070 34.615 0.00 0.00 0.00 3.66
1531 1657 7.065120 TGAATTTTCTTTGTCAATCACCCAT 57.935 32.000 0.00 0.00 0.00 4.00
1532 1658 6.462768 CCTGAATTTTCTTTGTCAATCACCCA 60.463 38.462 0.00 0.00 0.00 4.51
1533 1659 5.928264 CCTGAATTTTCTTTGTCAATCACCC 59.072 40.000 0.00 0.00 0.00 4.61
1534 1660 5.928264 CCCTGAATTTTCTTTGTCAATCACC 59.072 40.000 0.00 0.00 0.00 4.02
1543 1669 7.608308 TGTTTTCAACCCTGAATTTTCTTTG 57.392 32.000 0.00 0.00 41.22 2.77
1579 1705 5.404466 TTTTTGGCAACTAGCATAGCATT 57.596 34.783 0.00 0.00 44.39 3.56
1606 1732 3.068024 TCACGCCTTCTTTTCAGCATTTT 59.932 39.130 0.00 0.00 0.00 1.82
1607 1733 2.622942 TCACGCCTTCTTTTCAGCATTT 59.377 40.909 0.00 0.00 0.00 2.32
1608 1734 2.227388 CTCACGCCTTCTTTTCAGCATT 59.773 45.455 0.00 0.00 0.00 3.56
1609 1735 1.808945 CTCACGCCTTCTTTTCAGCAT 59.191 47.619 0.00 0.00 0.00 3.79
1610 1736 1.229428 CTCACGCCTTCTTTTCAGCA 58.771 50.000 0.00 0.00 0.00 4.41
1611 1737 0.110010 GCTCACGCCTTCTTTTCAGC 60.110 55.000 0.00 0.00 0.00 4.26
1639 1765 4.962751 TCGTCGGTAACAAAACGAAATTTG 59.037 37.500 0.00 10.13 41.00 2.32
1657 1783 2.124122 TCATCAACAAGTGTGTCGTCG 58.876 47.619 0.00 0.00 36.80 5.12
1658 1784 2.476619 CCTCATCAACAAGTGTGTCGTC 59.523 50.000 0.00 0.00 36.80 4.20
1659 1785 2.102420 TCCTCATCAACAAGTGTGTCGT 59.898 45.455 0.00 0.00 36.80 4.34
1731 1858 1.038681 TAGCATGTGCAATGGGGCAG 61.039 55.000 7.83 0.00 45.96 4.85
1801 1928 8.605746 CAACTGTGCATATTTCATATTTTTGGG 58.394 33.333 0.00 0.00 0.00 4.12
1802 1929 9.368674 TCAACTGTGCATATTTCATATTTTTGG 57.631 29.630 0.00 0.00 0.00 3.28
1807 1934 8.198778 TGCATTCAACTGTGCATATTTCATATT 58.801 29.630 0.00 0.00 45.60 1.28
1808 1935 7.718525 TGCATTCAACTGTGCATATTTCATAT 58.281 30.769 0.00 0.00 45.60 1.78
1809 1936 7.098074 TGCATTCAACTGTGCATATTTCATA 57.902 32.000 0.00 0.00 45.60 2.15
1811 1938 5.388408 TGCATTCAACTGTGCATATTTCA 57.612 34.783 0.00 0.00 45.60 2.69
1874 2001 1.401931 CCATGAAAAACTGCAGGCGAG 60.402 52.381 19.93 0.00 0.00 5.03
1920 2047 8.354711 TCTATAAATGAGGAACGATAGCATCT 57.645 34.615 0.00 0.00 42.67 2.90
2011 2148 1.133199 TGAAACATGGGAAGCTTGGGT 60.133 47.619 2.10 0.00 0.00 4.51
2056 2193 4.262121 CCTTTGATCTGATGCCACAAACAA 60.262 41.667 0.00 0.00 0.00 2.83
2112 2250 4.992381 AATACGAAACTTCACAGAGCAC 57.008 40.909 0.00 0.00 0.00 4.40
2144 2283 9.307121 AGAAGAAAAGTCAACATCACTATATCG 57.693 33.333 0.00 0.00 0.00 2.92
2151 2290 5.429957 AGCAGAAGAAAAGTCAACATCAC 57.570 39.130 0.00 0.00 0.00 3.06
2221 2361 0.837272 ACATATCCCCAACCTCCACG 59.163 55.000 0.00 0.00 0.00 4.94
2274 2414 6.761714 AGGGCGAATAATTTACAGACACTAAG 59.238 38.462 0.00 0.00 0.00 2.18
2327 2468 2.369532 TGGGGCGTTCTAGTAACAAGTT 59.630 45.455 0.00 0.00 0.00 2.66
2342 2492 6.318900 ACTTTAAATATCTTTCTTCTGGGGCG 59.681 38.462 0.00 0.00 0.00 6.13
2383 2535 5.412594 TCACCTTGATGCTTTGAACTACATC 59.587 40.000 0.00 0.00 39.47 3.06
2407 2562 7.434602 GTCACGAGAGACTAAAGTTTGTTAGTT 59.565 37.037 0.00 0.00 42.94 2.24
2456 2639 3.264193 TCCACATGTAGTTCCTTGCTGAT 59.736 43.478 0.00 0.00 0.00 2.90
2459 2642 4.307032 AATCCACATGTAGTTCCTTGCT 57.693 40.909 0.00 0.00 0.00 3.91
2521 2706 6.934083 GCCACAAATTAATTCTCCAAAAAGGA 59.066 34.615 0.10 0.00 46.75 3.36
2522 2707 6.709846 TGCCACAAATTAATTCTCCAAAAAGG 59.290 34.615 0.10 0.00 39.47 3.11
2523 2708 7.727331 TGCCACAAATTAATTCTCCAAAAAG 57.273 32.000 0.10 0.00 0.00 2.27
2641 2863 2.427453 AGCCAGTGTATAGTGAAGGTCG 59.573 50.000 0.00 0.00 0.00 4.79
2656 2878 5.140454 ACATTAAGGAGAAAAACAGCCAGT 58.860 37.500 0.00 0.00 0.00 4.00
2671 2893 6.152661 TGCAAAGAGGATAACCAACATTAAGG 59.847 38.462 0.00 0.00 38.94 2.69
2683 2905 4.657814 AAGGGAACTGCAAAGAGGATAA 57.342 40.909 0.00 0.00 42.68 1.75
2739 2962 1.429299 TCCTGGTCTGAACTCTCCTCA 59.571 52.381 0.00 0.00 0.00 3.86
2764 2987 7.946219 TGGGATATCATTTAGTTTGATGATGCT 59.054 33.333 4.83 0.00 41.67 3.79
2794 3017 5.231702 CACCATCTCAAATGATTTTGCACA 58.768 37.500 0.00 0.00 41.66 4.57
2850 3073 1.089920 GGACGACATTTGCAGCAGAT 58.910 50.000 0.00 0.00 0.00 2.90
2854 3077 1.210155 GGTGGACGACATTTGCAGC 59.790 57.895 0.00 0.00 0.00 5.25
2857 3080 1.210155 GCAGGTGGACGACATTTGC 59.790 57.895 0.00 0.00 35.26 3.68
2865 3088 4.012895 GCACAACGCAGGTGGACG 62.013 66.667 4.23 0.00 41.79 4.79
2985 3208 0.036875 AGGTTTCGAGGGCCTTCAAG 59.963 55.000 16.07 0.00 0.00 3.02
3045 3268 5.010012 TGCTAATGACTCGATGCATCTCTTA 59.990 40.000 23.73 12.87 0.00 2.10
3120 3343 2.105528 GGGCTTTGCATGATGCCG 59.894 61.111 15.70 4.58 44.23 5.69
3327 3550 0.755686 GCCTACTGAGTCCTGGGATG 59.244 60.000 0.00 0.00 0.00 3.51
3354 3873 0.261402 CCAGGGGCATTGTTCCCATA 59.739 55.000 16.06 0.00 45.73 2.74
3378 3897 6.071672 TCCTCTGTTCTACATCAGAAAGAGTG 60.072 42.308 16.28 11.69 44.89 3.51
3747 4273 2.548904 CTCTGCAAGATAGCCATCAAGC 59.451 50.000 0.00 0.00 45.62 4.01
3864 4390 3.181507 CCTTCAAGTACACATCAATGGCG 60.182 47.826 0.00 0.00 0.00 5.69
3889 4415 7.890515 TGCAGATAGAAGTAGGATACAAGATG 58.109 38.462 0.00 0.00 46.26 2.90
3895 4421 6.329496 GCAGATGCAGATAGAAGTAGGATAC 58.671 44.000 0.00 0.00 40.82 2.24
3942 4531 8.735513 ATCAAAATGATGTCATGCAGCTGCAA 62.736 38.462 42.25 27.80 44.51 4.08
3943 4532 7.355268 ATCAAAATGATGTCATGCAGCTGCA 62.355 40.000 41.05 41.05 45.03 4.41
3944 4533 2.579207 AAATGATGTCATGCAGCTGC 57.421 45.000 31.89 31.89 36.56 5.25
3945 4534 4.104696 TCAAAATGATGTCATGCAGCTG 57.895 40.909 10.11 10.11 36.56 4.24
3946 4535 5.339008 AATCAAAATGATGTCATGCAGCT 57.661 34.783 0.00 0.00 37.15 4.24
3947 4536 6.128391 ACAAAATCAAAATGATGTCATGCAGC 60.128 34.615 0.00 0.00 37.15 5.25
3948 4537 7.095397 ACACAAAATCAAAATGATGTCATGCAG 60.095 33.333 0.00 0.00 37.15 4.41
3949 4538 6.706716 ACACAAAATCAAAATGATGTCATGCA 59.293 30.769 0.00 0.00 37.15 3.96
3950 4539 7.124347 ACACAAAATCAAAATGATGTCATGC 57.876 32.000 0.00 0.00 37.15 4.06
3951 4540 7.532546 GCAACACAAAATCAAAATGATGTCATG 59.467 33.333 0.00 0.00 37.15 3.07
3952 4541 7.442969 AGCAACACAAAATCAAAATGATGTCAT 59.557 29.630 0.00 0.00 37.15 3.06
4006 5361 2.107141 ATAGCTGCTCCCGTTCGC 59.893 61.111 4.91 0.00 0.00 4.70
4665 6314 1.680338 AGGGACTCAAAACACTGCAC 58.320 50.000 0.00 0.00 0.00 4.57
4666 6315 2.023673 CAAGGGACTCAAAACACTGCA 58.976 47.619 0.00 0.00 38.49 4.41
4802 7657 5.678955 ACTATTTCAGTCCCCTCAACTAC 57.321 43.478 0.00 0.00 28.33 2.73
4874 7960 4.829064 TTGAACAATCGAACCAAAGAGG 57.171 40.909 0.00 0.00 45.67 3.69
4942 8028 2.549754 CTCAGTCCACACAAATCACCAC 59.450 50.000 0.00 0.00 0.00 4.16
4945 8031 3.126001 TCCTCAGTCCACACAAATCAC 57.874 47.619 0.00 0.00 0.00 3.06
4982 8068 5.946377 GGTCAAAGGAATCAACTGGACTATT 59.054 40.000 0.00 0.00 0.00 1.73
4983 8069 5.251700 AGGTCAAAGGAATCAACTGGACTAT 59.748 40.000 0.00 0.00 0.00 2.12
5240 8343 9.974750 CCGCTAGTAAGAAAGAAAGAAATAAAG 57.025 33.333 0.00 0.00 0.00 1.85
5241 8344 8.448615 GCCGCTAGTAAGAAAGAAAGAAATAAA 58.551 33.333 0.00 0.00 0.00 1.40
5242 8345 7.201496 CGCCGCTAGTAAGAAAGAAAGAAATAA 60.201 37.037 0.00 0.00 0.00 1.40
5243 8346 6.255020 CGCCGCTAGTAAGAAAGAAAGAAATA 59.745 38.462 0.00 0.00 0.00 1.40
5244 8347 5.063564 CGCCGCTAGTAAGAAAGAAAGAAAT 59.936 40.000 0.00 0.00 0.00 2.17
5249 8352 1.997606 GCGCCGCTAGTAAGAAAGAAA 59.002 47.619 0.00 0.00 0.00 2.52
5275 8378 0.316522 TCACACTGTCTGCTGAGCTC 59.683 55.000 6.82 6.82 0.00 4.09
5298 8401 9.823647 TCAATTCAGCTTTTTATAGGAGTAGAG 57.176 33.333 0.00 0.00 0.00 2.43
5302 8405 9.638176 ATCATCAATTCAGCTTTTTATAGGAGT 57.362 29.630 0.00 0.00 0.00 3.85
5303 8406 9.894783 CATCATCAATTCAGCTTTTTATAGGAG 57.105 33.333 0.00 0.00 0.00 3.69
5304 8407 9.631257 TCATCATCAATTCAGCTTTTTATAGGA 57.369 29.630 0.00 0.00 0.00 2.94
5309 8412 9.744468 CATCATCATCATCAATTCAGCTTTTTA 57.256 29.630 0.00 0.00 0.00 1.52
5310 8413 8.258007 ACATCATCATCATCAATTCAGCTTTTT 58.742 29.630 0.00 0.00 0.00 1.94
5311 8414 7.706607 CACATCATCATCATCAATTCAGCTTTT 59.293 33.333 0.00 0.00 0.00 2.27
5312 8415 7.203218 CACATCATCATCATCAATTCAGCTTT 58.797 34.615 0.00 0.00 0.00 3.51
5313 8416 6.735968 GCACATCATCATCATCAATTCAGCTT 60.736 38.462 0.00 0.00 0.00 3.74
5314 8417 5.278512 GCACATCATCATCATCAATTCAGCT 60.279 40.000 0.00 0.00 0.00 4.24
5315 8418 4.917998 GCACATCATCATCATCAATTCAGC 59.082 41.667 0.00 0.00 0.00 4.26
5316 8419 5.241728 AGGCACATCATCATCATCAATTCAG 59.758 40.000 0.00 0.00 0.00 3.02
5317 8420 5.009610 CAGGCACATCATCATCATCAATTCA 59.990 40.000 0.00 0.00 0.00 2.57
5318 8421 5.009710 ACAGGCACATCATCATCATCAATTC 59.990 40.000 0.00 0.00 0.00 2.17
5319 8422 4.893524 ACAGGCACATCATCATCATCAATT 59.106 37.500 0.00 0.00 0.00 2.32
5320 8423 4.470602 ACAGGCACATCATCATCATCAAT 58.529 39.130 0.00 0.00 0.00 2.57
5322 8425 3.118186 TGACAGGCACATCATCATCATCA 60.118 43.478 0.00 0.00 0.00 3.07
5325 8428 3.473625 GATGACAGGCACATCATCATCA 58.526 45.455 16.29 0.00 46.13 3.07
5330 8433 2.240414 TGAAGGATGACAGGCACATCAT 59.760 45.455 16.53 9.04 43.84 2.45
5331 8434 1.629861 TGAAGGATGACAGGCACATCA 59.370 47.619 16.53 5.10 43.84 3.07
5334 8437 2.885135 AATGAAGGATGACAGGCACA 57.115 45.000 0.00 0.00 0.00 4.57
5335 8438 4.009675 TGTAAATGAAGGATGACAGGCAC 58.990 43.478 0.00 0.00 0.00 5.01
5338 8441 5.009631 TGGTTGTAAATGAAGGATGACAGG 58.990 41.667 0.00 0.00 0.00 4.00
5341 8444 6.093495 TCGAATGGTTGTAAATGAAGGATGAC 59.907 38.462 0.00 0.00 0.00 3.06
5344 8447 8.924511 ATATCGAATGGTTGTAAATGAAGGAT 57.075 30.769 0.00 0.00 0.00 3.24
5345 8448 9.268268 GTATATCGAATGGTTGTAAATGAAGGA 57.732 33.333 0.00 0.00 0.00 3.36
5353 8456 7.170151 CGTTGGATGTATATCGAATGGTTGTAA 59.830 37.037 8.09 0.00 35.57 2.41
5354 8457 6.643360 CGTTGGATGTATATCGAATGGTTGTA 59.357 38.462 8.09 0.00 35.57 2.41
5355 8458 5.465390 CGTTGGATGTATATCGAATGGTTGT 59.535 40.000 8.09 0.00 35.57 3.32
5356 8459 5.614668 GCGTTGGATGTATATCGAATGGTTG 60.615 44.000 15.02 1.18 38.04 3.77
5357 8460 4.451096 GCGTTGGATGTATATCGAATGGTT 59.549 41.667 15.02 0.00 38.04 3.67
5359 8462 3.993736 TGCGTTGGATGTATATCGAATGG 59.006 43.478 15.02 6.33 38.04 3.16
5360 8463 5.578336 AGATGCGTTGGATGTATATCGAATG 59.422 40.000 10.72 10.72 39.58 2.67
5363 8466 4.217550 TCAGATGCGTTGGATGTATATCGA 59.782 41.667 0.00 0.00 33.98 3.59
5365 8468 5.574830 GTCTCAGATGCGTTGGATGTATATC 59.425 44.000 0.00 0.00 0.00 1.63
5366 8469 5.011023 TGTCTCAGATGCGTTGGATGTATAT 59.989 40.000 0.00 0.00 0.00 0.86
5368 8471 3.132824 TGTCTCAGATGCGTTGGATGTAT 59.867 43.478 0.00 0.00 0.00 2.29
5369 8472 2.495669 TGTCTCAGATGCGTTGGATGTA 59.504 45.455 0.00 0.00 0.00 2.29
5370 8473 1.276138 TGTCTCAGATGCGTTGGATGT 59.724 47.619 0.00 0.00 0.00 3.06
5371 8474 2.014335 TGTCTCAGATGCGTTGGATG 57.986 50.000 0.00 0.00 0.00 3.51
5372 8475 2.625737 CTTGTCTCAGATGCGTTGGAT 58.374 47.619 0.00 0.00 0.00 3.41
5373 8476 1.941209 GCTTGTCTCAGATGCGTTGGA 60.941 52.381 0.00 0.00 0.00 3.53
5374 8477 0.445436 GCTTGTCTCAGATGCGTTGG 59.555 55.000 0.00 0.00 0.00 3.77
5375 8478 1.436600 AGCTTGTCTCAGATGCGTTG 58.563 50.000 0.00 0.00 0.00 4.10
5376 8479 3.193263 CATAGCTTGTCTCAGATGCGTT 58.807 45.455 0.00 0.00 0.00 4.84
5377 8480 2.167281 ACATAGCTTGTCTCAGATGCGT 59.833 45.455 0.00 0.00 30.89 5.24
5378 8481 2.819115 ACATAGCTTGTCTCAGATGCG 58.181 47.619 0.00 0.00 30.89 4.73
5388 8491 4.916983 TTGCAAAACTGACATAGCTTGT 57.083 36.364 0.00 0.00 42.79 3.16
5389 8492 6.476380 TCTTTTTGCAAAACTGACATAGCTTG 59.524 34.615 23.79 0.00 0.00 4.01
5390 8493 6.476706 GTCTTTTTGCAAAACTGACATAGCTT 59.523 34.615 31.34 0.00 34.52 3.74
5391 8494 5.979517 GTCTTTTTGCAAAACTGACATAGCT 59.020 36.000 31.34 0.00 34.52 3.32
5392 8495 5.175673 GGTCTTTTTGCAAAACTGACATAGC 59.824 40.000 33.87 23.11 35.31 2.97
5393 8496 5.691754 GGGTCTTTTTGCAAAACTGACATAG 59.308 40.000 33.87 24.20 35.31 2.23
5394 8497 5.452636 GGGGTCTTTTTGCAAAACTGACATA 60.453 40.000 33.87 18.55 35.31 2.29
5395 8498 4.441792 GGGTCTTTTTGCAAAACTGACAT 58.558 39.130 33.87 0.00 35.31 3.06
5396 8499 3.368948 GGGGTCTTTTTGCAAAACTGACA 60.369 43.478 33.87 19.59 35.31 3.58
5397 8500 3.194861 GGGGTCTTTTTGCAAAACTGAC 58.805 45.455 29.95 29.95 34.06 3.51
5398 8501 2.169561 GGGGGTCTTTTTGCAAAACTGA 59.830 45.455 23.79 20.18 0.00 3.41
5399 8502 2.560504 GGGGGTCTTTTTGCAAAACTG 58.439 47.619 23.79 18.39 0.00 3.16
5400 8503 1.138069 CGGGGGTCTTTTTGCAAAACT 59.862 47.619 23.79 0.00 0.00 2.66
5401 8504 1.134640 ACGGGGGTCTTTTTGCAAAAC 60.135 47.619 23.79 13.51 0.00 2.43
5402 8505 1.196012 ACGGGGGTCTTTTTGCAAAA 58.804 45.000 20.46 20.46 0.00 2.44
5403 8506 1.682323 GTACGGGGGTCTTTTTGCAAA 59.318 47.619 8.05 8.05 0.00 3.68
5404 8507 1.133730 AGTACGGGGGTCTTTTTGCAA 60.134 47.619 0.00 0.00 0.00 4.08
5405 8508 0.475044 AGTACGGGGGTCTTTTTGCA 59.525 50.000 0.00 0.00 0.00 4.08
5406 8509 1.162698 GAGTACGGGGGTCTTTTTGC 58.837 55.000 0.00 0.00 0.00 3.68
5407 8510 1.072648 TGGAGTACGGGGGTCTTTTTG 59.927 52.381 0.00 0.00 0.00 2.44
5408 8511 1.072806 GTGGAGTACGGGGGTCTTTTT 59.927 52.381 0.00 0.00 0.00 1.94
5409 8512 0.689055 GTGGAGTACGGGGGTCTTTT 59.311 55.000 0.00 0.00 0.00 2.27
5410 8513 0.178912 AGTGGAGTACGGGGGTCTTT 60.179 55.000 0.00 0.00 0.00 2.52
5411 8514 0.614134 GAGTGGAGTACGGGGGTCTT 60.614 60.000 0.00 0.00 0.00 3.01
5412 8515 1.000107 GAGTGGAGTACGGGGGTCT 60.000 63.158 0.00 0.00 0.00 3.85
5413 8516 2.413142 CGAGTGGAGTACGGGGGTC 61.413 68.421 0.00 0.00 0.00 4.46
5414 8517 2.362120 CGAGTGGAGTACGGGGGT 60.362 66.667 0.00 0.00 0.00 4.95
5415 8518 3.834799 GCGAGTGGAGTACGGGGG 61.835 72.222 0.00 0.00 0.00 5.40
5416 8519 2.348888 AAGCGAGTGGAGTACGGGG 61.349 63.158 0.00 0.00 0.00 5.73
5417 8520 1.153823 CAAGCGAGTGGAGTACGGG 60.154 63.158 0.00 0.00 0.00 5.28
5418 8521 0.038526 AACAAGCGAGTGGAGTACGG 60.039 55.000 0.00 0.00 0.00 4.02
5419 8522 1.779569 AAACAAGCGAGTGGAGTACG 58.220 50.000 0.00 0.00 0.00 3.67
5420 8523 4.170292 TCTAAACAAGCGAGTGGAGTAC 57.830 45.455 0.00 0.00 0.00 2.73
5421 8524 6.327934 GTTATCTAAACAAGCGAGTGGAGTA 58.672 40.000 0.00 0.00 0.00 2.59
5422 8525 3.963428 ATCTAAACAAGCGAGTGGAGT 57.037 42.857 0.00 0.00 0.00 3.85
5423 8526 4.567159 GGTTATCTAAACAAGCGAGTGGAG 59.433 45.833 0.00 0.00 0.00 3.86
5424 8527 4.501071 GGTTATCTAAACAAGCGAGTGGA 58.499 43.478 0.00 0.00 0.00 4.02
5425 8528 3.621715 GGGTTATCTAAACAAGCGAGTGG 59.378 47.826 0.00 0.00 0.00 4.00
5426 8529 3.621715 GGGGTTATCTAAACAAGCGAGTG 59.378 47.826 0.00 0.00 0.00 3.51
5427 8530 3.370209 GGGGGTTATCTAAACAAGCGAGT 60.370 47.826 0.00 0.00 0.00 4.18
5428 8531 3.118371 AGGGGGTTATCTAAACAAGCGAG 60.118 47.826 0.00 0.00 0.00 5.03
5429 8532 2.841881 AGGGGGTTATCTAAACAAGCGA 59.158 45.455 0.00 0.00 0.00 4.93
5430 8533 2.943033 CAGGGGGTTATCTAAACAAGCG 59.057 50.000 0.00 0.00 0.00 4.68
5431 8534 2.688446 GCAGGGGGTTATCTAAACAAGC 59.312 50.000 0.00 0.00 0.00 4.01
5432 8535 3.053619 AGGCAGGGGGTTATCTAAACAAG 60.054 47.826 0.00 0.00 0.00 3.16
5433 8536 2.923629 AGGCAGGGGGTTATCTAAACAA 59.076 45.455 0.00 0.00 0.00 2.83
5434 8537 2.508300 GAGGCAGGGGGTTATCTAAACA 59.492 50.000 0.00 0.00 0.00 2.83
5435 8538 2.778270 AGAGGCAGGGGGTTATCTAAAC 59.222 50.000 0.00 0.00 0.00 2.01
5436 8539 3.046374 GAGAGGCAGGGGGTTATCTAAA 58.954 50.000 0.00 0.00 0.00 1.85
5437 8540 2.022428 TGAGAGGCAGGGGGTTATCTAA 60.022 50.000 0.00 0.00 0.00 2.10
5438 8541 1.578703 TGAGAGGCAGGGGGTTATCTA 59.421 52.381 0.00 0.00 0.00 1.98
5439 8542 0.343372 TGAGAGGCAGGGGGTTATCT 59.657 55.000 0.00 0.00 0.00 1.98
5440 8543 0.470341 GTGAGAGGCAGGGGGTTATC 59.530 60.000 0.00 0.00 0.00 1.75
5441 8544 1.338136 CGTGAGAGGCAGGGGGTTAT 61.338 60.000 0.00 0.00 0.00 1.89
5442 8545 1.987855 CGTGAGAGGCAGGGGGTTA 60.988 63.158 0.00 0.00 0.00 2.85
5443 8546 3.322466 CGTGAGAGGCAGGGGGTT 61.322 66.667 0.00 0.00 0.00 4.11
5446 8549 4.154347 GAGCGTGAGAGGCAGGGG 62.154 72.222 0.00 0.00 33.10 4.79
5447 8550 3.368190 CTGAGCGTGAGAGGCAGGG 62.368 68.421 0.00 0.00 33.10 4.45
5448 8551 2.183811 CTGAGCGTGAGAGGCAGG 59.816 66.667 0.00 0.00 35.53 4.85
5449 8552 1.153862 GACTGAGCGTGAGAGGCAG 60.154 63.158 0.00 0.00 0.00 4.85
5450 8553 1.253593 ATGACTGAGCGTGAGAGGCA 61.254 55.000 0.00 0.00 0.00 4.75
5451 8554 0.527385 GATGACTGAGCGTGAGAGGC 60.527 60.000 0.00 0.00 0.00 4.70
5452 8555 1.065401 GAGATGACTGAGCGTGAGAGG 59.935 57.143 0.00 0.00 0.00 3.69
5453 8556 2.016318 AGAGATGACTGAGCGTGAGAG 58.984 52.381 0.00 0.00 0.00 3.20
5454 8557 2.013400 GAGAGATGACTGAGCGTGAGA 58.987 52.381 0.00 0.00 0.00 3.27
5455 8558 1.065401 GGAGAGATGACTGAGCGTGAG 59.935 57.143 0.00 0.00 0.00 3.51
5456 8559 1.098869 GGAGAGATGACTGAGCGTGA 58.901 55.000 0.00 0.00 0.00 4.35
5457 8560 0.102120 GGGAGAGATGACTGAGCGTG 59.898 60.000 0.00 0.00 0.00 5.34
5458 8561 0.033601 AGGGAGAGATGACTGAGCGT 60.034 55.000 0.00 0.00 0.00 5.07
5459 8562 0.667993 GAGGGAGAGATGACTGAGCG 59.332 60.000 0.00 0.00 0.00 5.03
5460 8563 1.956477 GAGAGGGAGAGATGACTGAGC 59.044 57.143 0.00 0.00 0.00 4.26
5461 8564 2.951642 GTGAGAGGGAGAGATGACTGAG 59.048 54.545 0.00 0.00 0.00 3.35
5462 8565 2.580322 AGTGAGAGGGAGAGATGACTGA 59.420 50.000 0.00 0.00 0.00 3.41
5463 8566 3.017048 AGTGAGAGGGAGAGATGACTG 57.983 52.381 0.00 0.00 0.00 3.51
5464 8567 3.631250 GAAGTGAGAGGGAGAGATGACT 58.369 50.000 0.00 0.00 0.00 3.41
5465 8568 2.357637 CGAAGTGAGAGGGAGAGATGAC 59.642 54.545 0.00 0.00 0.00 3.06
5466 8569 2.025793 ACGAAGTGAGAGGGAGAGATGA 60.026 50.000 0.00 0.00 42.51 2.92
5467 8570 2.374184 ACGAAGTGAGAGGGAGAGATG 58.626 52.381 0.00 0.00 42.51 2.90
5468 8571 2.818751 ACGAAGTGAGAGGGAGAGAT 57.181 50.000 0.00 0.00 42.51 2.75
5482 8585 4.377839 TTTCTGAGATGGCTAGACGAAG 57.622 45.455 0.00 0.00 0.00 3.79
5483 8586 4.801330 TTTTCTGAGATGGCTAGACGAA 57.199 40.909 0.00 0.00 0.00 3.85
5484 8587 4.801330 TTTTTCTGAGATGGCTAGACGA 57.199 40.909 0.00 0.00 0.00 4.20
5503 8606 6.794534 ACCTCTCCAGATCCTTATTGTTTTT 58.205 36.000 0.00 0.00 0.00 1.94
5504 8607 6.394345 ACCTCTCCAGATCCTTATTGTTTT 57.606 37.500 0.00 0.00 0.00 2.43
5505 8608 5.395768 CGACCTCTCCAGATCCTTATTGTTT 60.396 44.000 0.00 0.00 0.00 2.83
5506 8609 4.100189 CGACCTCTCCAGATCCTTATTGTT 59.900 45.833 0.00 0.00 0.00 2.83
5507 8610 3.639094 CGACCTCTCCAGATCCTTATTGT 59.361 47.826 0.00 0.00 0.00 2.71
5508 8611 3.553922 GCGACCTCTCCAGATCCTTATTG 60.554 52.174 0.00 0.00 0.00 1.90
5509 8612 2.630580 GCGACCTCTCCAGATCCTTATT 59.369 50.000 0.00 0.00 0.00 1.40
5510 8613 2.243810 GCGACCTCTCCAGATCCTTAT 58.756 52.381 0.00 0.00 0.00 1.73
5511 8614 1.693627 GCGACCTCTCCAGATCCTTA 58.306 55.000 0.00 0.00 0.00 2.69
5512 8615 1.045911 GGCGACCTCTCCAGATCCTT 61.046 60.000 0.00 0.00 0.00 3.36
5513 8616 1.456705 GGCGACCTCTCCAGATCCT 60.457 63.158 0.00 0.00 0.00 3.24
5514 8617 2.851071 CGGCGACCTCTCCAGATCC 61.851 68.421 0.00 0.00 0.00 3.36
5515 8618 2.725008 CGGCGACCTCTCCAGATC 59.275 66.667 0.00 0.00 0.00 2.75
5516 8619 3.532155 GCGGCGACCTCTCCAGAT 61.532 66.667 12.98 0.00 0.00 2.90
5517 8620 4.742649 AGCGGCGACCTCTCCAGA 62.743 66.667 12.98 0.00 0.00 3.86
5518 8621 3.302347 AAAGCGGCGACCTCTCCAG 62.302 63.158 12.98 0.00 0.00 3.86
5519 8622 3.296709 GAAAGCGGCGACCTCTCCA 62.297 63.158 12.98 0.00 0.00 3.86
5520 8623 2.509561 GAAAGCGGCGACCTCTCC 60.510 66.667 12.98 0.00 0.00 3.71
5521 8624 2.881352 CGAAAGCGGCGACCTCTC 60.881 66.667 12.98 0.00 0.00 3.20
5542 8645 4.410400 GAGTTGGGGGCAGACGGG 62.410 72.222 0.00 0.00 0.00 5.28
5543 8646 4.410400 GGAGTTGGGGGCAGACGG 62.410 72.222 0.00 0.00 0.00 4.79
5544 8647 3.316573 GAGGAGTTGGGGGCAGACG 62.317 68.421 0.00 0.00 0.00 4.18
5545 8648 2.671682 GAGGAGTTGGGGGCAGAC 59.328 66.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.