Multiple sequence alignment - TraesCS5D01G383600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G383600 chr5D 100.000 3263 0 0 1 3263 453411900 453408638 0.000000e+00 6026.0
1 TraesCS5D01G383600 chr5D 86.341 410 37 11 7 401 515104310 515104715 2.330000e-116 429.0
2 TraesCS5D01G383600 chr5D 83.855 415 47 12 7 408 525087661 525088068 8.550000e-101 377.0
3 TraesCS5D01G383600 chr5D 95.349 172 7 1 2818 2989 513980491 513980321 4.150000e-69 272.0
4 TraesCS5D01G383600 chr5D 98.000 50 1 0 3036 3085 453404377 453404328 1.610000e-13 87.9
5 TraesCS5D01G383600 chr5B 96.475 2213 63 11 618 2821 553932566 553930360 0.000000e+00 3640.0
6 TraesCS5D01G383600 chr5B 82.118 425 53 14 7 412 608557271 608556851 3.120000e-90 342.0
7 TraesCS5D01G383600 chr5B 84.828 290 16 9 2982 3249 553930363 553930080 1.930000e-67 267.0
8 TraesCS5D01G383600 chr5B 94.017 117 4 2 444 559 553932681 553932567 1.200000e-39 174.0
9 TraesCS5D01G383600 chr5A 96.388 2021 57 8 803 2820 572054868 572052861 0.000000e+00 3314.0
10 TraesCS5D01G383600 chr5A 88.087 277 16 4 2987 3249 572052858 572052585 2.440000e-81 313.0
11 TraesCS5D01G383600 chr5A 95.122 41 2 0 687 727 572055987 572055947 7.560000e-07 65.8
12 TraesCS5D01G383600 chr3D 88.998 409 30 8 7 402 454744551 454744145 2.930000e-135 492.0
13 TraesCS5D01G383600 chr3D 88.293 410 28 9 7 404 547780028 547779627 1.060000e-129 473.0
14 TraesCS5D01G383600 chr3D 82.974 417 48 13 7 407 23155580 23155989 4.000000e-94 355.0
15 TraesCS5D01G383600 chr3D 79.310 145 17 6 3036 3168 65560631 65560488 4.480000e-14 89.8
16 TraesCS5D01G383600 chr3D 96.000 50 2 0 3036 3085 285757189 285757238 7.500000e-12 82.4
17 TraesCS5D01G383600 chr1D 86.396 419 35 8 7 406 405386694 405387109 3.870000e-119 438.0
18 TraesCS5D01G383600 chr1D 98.000 50 1 0 3036 3085 241993422 241993373 1.610000e-13 87.9
19 TraesCS5D01G383600 chr2D 87.535 353 29 7 7 350 324007401 324007055 8.490000e-106 394.0
20 TraesCS5D01G383600 chr2D 99.412 170 1 0 2817 2986 606601832 606601663 3.160000e-80 309.0
21 TraesCS5D01G383600 chr2D 80.788 406 64 12 7 403 598801771 598801371 4.090000e-79 305.0
22 TraesCS5D01G383600 chr2D 94.643 168 8 1 2819 2986 47658289 47658455 3.230000e-65 259.0
23 TraesCS5D01G383600 chr2D 86.145 166 10 6 404 556 539436911 539436746 2.010000e-37 167.0
24 TraesCS5D01G383600 chrUn 85.831 367 37 7 55 409 61736337 61736700 3.070000e-100 375.0
25 TraesCS5D01G383600 chrUn 98.000 50 1 0 3036 3085 28806576 28806625 1.610000e-13 87.9
26 TraesCS5D01G383600 chrUn 96.000 50 2 0 3036 3085 105109585 105109536 7.500000e-12 82.4
27 TraesCS5D01G383600 chr7D 82.974 417 52 8 7 408 534654227 534653815 3.100000e-95 359.0
28 TraesCS5D01G383600 chr7D 82.619 420 48 15 7 407 83378723 83378310 6.700000e-92 348.0
29 TraesCS5D01G383600 chr7D 97.059 170 5 0 2817 2986 71585056 71585225 1.480000e-73 287.0
30 TraesCS5D01G383600 chr7D 94.186 172 9 1 2815 2986 5492041 5492211 8.980000e-66 261.0
31 TraesCS5D01G383600 chr7D 82.201 309 35 13 114 407 53190491 53190188 6.990000e-62 248.0
32 TraesCS5D01G383600 chr7D 98.000 50 1 0 3036 3085 17613359 17613408 1.610000e-13 87.9
33 TraesCS5D01G383600 chr7D 82.979 94 3 2 3081 3169 493938989 493939074 4.520000e-09 73.1
34 TraesCS5D01G383600 chr2B 83.168 404 47 16 7 402 678378673 678379063 1.860000e-92 350.0
35 TraesCS5D01G383600 chr2B 82.000 400 54 11 7 402 228911166 228910781 1.130000e-84 324.0
36 TraesCS5D01G383600 chr2B 87.113 194 19 3 578 766 598318 598126 7.090000e-52 215.0
37 TraesCS5D01G383600 chr1B 83.029 383 55 5 7 381 90875856 90876236 4.030000e-89 339.0
38 TraesCS5D01G383600 chr3B 81.862 419 55 12 7 408 785696764 785696350 1.880000e-87 333.0
39 TraesCS5D01G383600 chr3B 93.143 175 11 1 2814 2988 372838437 372838610 4.180000e-64 255.0
40 TraesCS5D01G383600 chr6D 84.548 343 35 12 7 341 36261268 36260936 1.130000e-84 324.0
41 TraesCS5D01G383600 chr6D 92.529 174 12 1 2815 2988 153869235 153869407 6.990000e-62 248.0
42 TraesCS5D01G383600 chr4A 93.750 176 9 2 2812 2986 665604294 665604120 2.500000e-66 263.0
43 TraesCS5D01G383600 chr1A 94.578 166 8 1 2819 2984 11628172 11628336 4.180000e-64 255.0
44 TraesCS5D01G383600 chr1A 89.637 193 15 3 578 766 366131732 366131923 1.170000e-59 241.0
45 TraesCS5D01G383600 chr1A 86.747 166 9 6 404 556 366131582 366131747 4.330000e-39 172.0
46 TraesCS5D01G383600 chr2A 81.361 338 40 12 85 407 706573649 706573320 1.500000e-63 254.0
47 TraesCS5D01G383600 chr7B 83.513 279 31 12 78 350 636935607 636935338 2.510000e-61 246.0
48 TraesCS5D01G383600 chr6B 87.113 194 19 3 578 766 251298081 251297889 7.090000e-52 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G383600 chr5D 453408638 453411900 3262 True 6026.000000 6026 100.000000 1 3263 1 chr5D.!!$R2 3262
1 TraesCS5D01G383600 chr5B 553930080 553932681 2601 True 1360.333333 3640 91.773333 444 3249 3 chr5B.!!$R2 2805
2 TraesCS5D01G383600 chr5A 572052585 572055987 3402 True 1230.933333 3314 93.199000 687 3249 3 chr5A.!!$R1 2562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
591 592 0.037734 GGGGGAAAAGACGACACCAT 59.962 55.0 0.0 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2538 3546 1.016627 GCATGCGAGAGTGGCAATAA 58.983 50.0 0.0 0.0 44.66 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.583143 ACGAAAGAGGGGAACTTTTGG 58.417 47.619 0.00 0.00 40.81 3.28
21 22 2.092049 ACGAAAGAGGGGAACTTTTGGT 60.092 45.455 0.00 0.00 40.81 3.67
22 23 2.552743 CGAAAGAGGGGAACTTTTGGTC 59.447 50.000 0.00 0.00 37.64 4.02
23 24 3.747708 CGAAAGAGGGGAACTTTTGGTCT 60.748 47.826 0.00 0.00 37.64 3.85
24 25 4.504340 CGAAAGAGGGGAACTTTTGGTCTA 60.504 45.833 0.00 0.00 37.64 2.59
25 26 4.368565 AAGAGGGGAACTTTTGGTCTAC 57.631 45.455 0.00 0.00 36.15 2.59
26 27 2.302157 AGAGGGGAACTTTTGGTCTACG 59.698 50.000 0.00 0.00 36.15 3.51
27 28 1.350019 AGGGGAACTTTTGGTCTACGG 59.650 52.381 0.00 0.00 36.15 4.02
28 29 1.612462 GGGGAACTTTTGGTCTACGGG 60.612 57.143 0.00 0.00 36.15 5.28
29 30 1.612462 GGGAACTTTTGGTCTACGGGG 60.612 57.143 0.00 0.00 36.15 5.73
30 31 1.348696 GGAACTTTTGGTCTACGGGGA 59.651 52.381 0.00 0.00 36.15 4.81
31 32 2.420642 GAACTTTTGGTCTACGGGGAC 58.579 52.381 2.10 2.10 32.27 4.46
32 33 1.426751 ACTTTTGGTCTACGGGGACA 58.573 50.000 11.12 0.00 37.91 4.02
33 34 1.982958 ACTTTTGGTCTACGGGGACAT 59.017 47.619 11.12 0.00 37.91 3.06
34 35 2.290071 ACTTTTGGTCTACGGGGACATG 60.290 50.000 11.12 0.00 37.91 3.21
35 36 1.354101 TTTGGTCTACGGGGACATGT 58.646 50.000 0.00 0.00 37.91 3.21
36 37 2.234896 TTGGTCTACGGGGACATGTA 57.765 50.000 0.00 0.00 37.91 2.29
37 38 1.477553 TGGTCTACGGGGACATGTAC 58.522 55.000 0.00 0.00 37.91 2.90
38 39 1.272592 TGGTCTACGGGGACATGTACA 60.273 52.381 10.99 0.00 37.91 2.90
39 40 1.135721 GGTCTACGGGGACATGTACAC 59.864 57.143 10.99 5.00 37.91 2.90
40 41 1.135721 GTCTACGGGGACATGTACACC 59.864 57.143 10.99 7.92 36.35 4.16
41 42 0.462789 CTACGGGGACATGTACACCC 59.537 60.000 18.36 18.36 42.58 4.61
42 43 0.041535 TACGGGGACATGTACACCCT 59.958 55.000 23.06 15.43 42.86 4.34
43 44 0.041535 ACGGGGACATGTACACCCTA 59.958 55.000 23.06 0.00 42.86 3.53
44 45 1.343681 ACGGGGACATGTACACCCTAT 60.344 52.381 23.06 12.94 42.86 2.57
45 46 2.091166 ACGGGGACATGTACACCCTATA 60.091 50.000 23.06 0.00 42.86 1.31
46 47 3.170717 CGGGGACATGTACACCCTATAT 58.829 50.000 23.06 0.00 42.86 0.86
47 48 3.056107 CGGGGACATGTACACCCTATATG 60.056 52.174 23.06 4.66 42.86 1.78
48 49 4.164981 GGGGACATGTACACCCTATATGA 58.835 47.826 20.17 0.00 42.86 2.15
49 50 4.783227 GGGGACATGTACACCCTATATGAT 59.217 45.833 20.17 0.00 42.86 2.45
50 51 5.250774 GGGGACATGTACACCCTATATGATT 59.749 44.000 20.17 0.00 42.86 2.57
51 52 6.240176 GGGGACATGTACACCCTATATGATTT 60.240 42.308 20.17 0.00 42.86 2.17
52 53 7.231467 GGGACATGTACACCCTATATGATTTT 58.769 38.462 10.99 0.00 40.39 1.82
53 54 7.174946 GGGACATGTACACCCTATATGATTTTG 59.825 40.741 10.99 0.00 40.39 2.44
54 55 7.719633 GGACATGTACACCCTATATGATTTTGT 59.280 37.037 2.19 0.00 0.00 2.83
55 56 9.120538 GACATGTACACCCTATATGATTTTGTT 57.879 33.333 0.00 0.00 0.00 2.83
86 87 9.971744 ATTTCAACAAAAAGTCGAAAAATTCTG 57.028 25.926 0.00 0.00 0.00 3.02
87 88 8.749841 TTCAACAAAAAGTCGAAAAATTCTGA 57.250 26.923 0.00 0.00 0.00 3.27
88 89 8.749841 TCAACAAAAAGTCGAAAAATTCTGAA 57.250 26.923 0.00 0.00 0.00 3.02
89 90 9.197694 TCAACAAAAAGTCGAAAAATTCTGAAA 57.802 25.926 0.00 0.00 0.00 2.69
90 91 9.804547 CAACAAAAAGTCGAAAAATTCTGAAAA 57.195 25.926 0.00 0.00 0.00 2.29
127 128 7.875327 AAACTTGACCTTACATTGTACTTGT 57.125 32.000 0.00 7.12 0.00 3.16
128 129 6.861065 ACTTGACCTTACATTGTACTTGTG 57.139 37.500 10.97 2.63 0.00 3.33
129 130 6.588204 ACTTGACCTTACATTGTACTTGTGA 58.412 36.000 10.97 3.85 0.00 3.58
130 131 6.706270 ACTTGACCTTACATTGTACTTGTGAG 59.294 38.462 10.97 11.37 32.22 3.51
131 132 6.413783 TGACCTTACATTGTACTTGTGAGA 57.586 37.500 17.13 2.08 33.76 3.27
132 133 6.822442 TGACCTTACATTGTACTTGTGAGAA 58.178 36.000 17.13 4.11 33.76 2.87
133 134 7.276658 TGACCTTACATTGTACTTGTGAGAAA 58.723 34.615 17.13 3.86 33.76 2.52
134 135 7.771361 TGACCTTACATTGTACTTGTGAGAAAA 59.229 33.333 17.13 3.59 33.76 2.29
135 136 8.514330 ACCTTACATTGTACTTGTGAGAAAAA 57.486 30.769 17.13 3.08 33.76 1.94
136 137 9.131791 ACCTTACATTGTACTTGTGAGAAAAAT 57.868 29.630 17.13 0.00 33.76 1.82
137 138 9.965824 CCTTACATTGTACTTGTGAGAAAAATT 57.034 29.630 17.13 0.00 33.76 1.82
141 142 9.301153 ACATTGTACTTGTGAGAAAAATTTCAC 57.699 29.630 8.47 1.73 43.07 3.18
155 156 9.330063 AGAAAAATTTCACAAAAAGAGAATCCC 57.670 29.630 8.47 0.00 39.61 3.85
156 157 8.450578 AAAAATTTCACAAAAAGAGAATCCCC 57.549 30.769 0.00 0.00 33.66 4.81
157 158 5.745312 ATTTCACAAAAAGAGAATCCCCC 57.255 39.130 0.00 0.00 33.66 5.40
158 159 4.469469 TTCACAAAAAGAGAATCCCCCT 57.531 40.909 0.00 0.00 33.66 4.79
159 160 4.469469 TCACAAAAAGAGAATCCCCCTT 57.531 40.909 0.00 0.00 33.66 3.95
160 161 4.814967 TCACAAAAAGAGAATCCCCCTTT 58.185 39.130 0.00 0.00 33.66 3.11
161 162 4.588528 TCACAAAAAGAGAATCCCCCTTTG 59.411 41.667 0.00 0.00 33.66 2.77
162 163 4.588528 CACAAAAAGAGAATCCCCCTTTGA 59.411 41.667 0.00 0.00 33.66 2.69
163 164 4.588951 ACAAAAAGAGAATCCCCCTTTGAC 59.411 41.667 0.00 0.00 33.66 3.18
164 165 4.749048 AAAAGAGAATCCCCCTTTGACT 57.251 40.909 0.00 0.00 33.66 3.41
165 166 4.749048 AAAGAGAATCCCCCTTTGACTT 57.251 40.909 0.00 0.00 33.66 3.01
166 167 4.308526 AAGAGAATCCCCCTTTGACTTC 57.691 45.455 0.00 0.00 33.66 3.01
167 168 3.536287 AGAGAATCCCCCTTTGACTTCT 58.464 45.455 0.00 0.00 33.66 2.85
168 169 3.919554 AGAGAATCCCCCTTTGACTTCTT 59.080 43.478 0.00 0.00 33.66 2.52
169 170 4.355287 AGAGAATCCCCCTTTGACTTCTTT 59.645 41.667 0.00 0.00 33.66 2.52
170 171 5.079998 AGAATCCCCCTTTGACTTCTTTT 57.920 39.130 0.00 0.00 0.00 2.27
171 172 5.080337 AGAATCCCCCTTTGACTTCTTTTC 58.920 41.667 0.00 0.00 0.00 2.29
172 173 3.963476 TCCCCCTTTGACTTCTTTTCA 57.037 42.857 0.00 0.00 0.00 2.69
173 174 4.258457 TCCCCCTTTGACTTCTTTTCAA 57.742 40.909 0.00 0.00 0.00 2.69
174 175 4.615513 TCCCCCTTTGACTTCTTTTCAAA 58.384 39.130 0.00 0.00 39.99 2.69
175 176 5.026790 TCCCCCTTTGACTTCTTTTCAAAA 58.973 37.500 0.00 0.00 41.32 2.44
176 177 5.485708 TCCCCCTTTGACTTCTTTTCAAAAA 59.514 36.000 0.00 0.00 41.32 1.94
205 206 5.722021 AAAATTCGCCAAAATAGTGACCT 57.278 34.783 0.00 0.00 0.00 3.85
206 207 6.827586 AAAATTCGCCAAAATAGTGACCTA 57.172 33.333 0.00 0.00 0.00 3.08
207 208 7.404671 AAAATTCGCCAAAATAGTGACCTAT 57.595 32.000 0.00 0.00 35.33 2.57
208 209 8.514330 AAAATTCGCCAAAATAGTGACCTATA 57.486 30.769 0.00 0.00 32.57 1.31
209 210 8.514330 AAATTCGCCAAAATAGTGACCTATAA 57.486 30.769 0.00 0.00 32.57 0.98
210 211 8.691661 AATTCGCCAAAATAGTGACCTATAAT 57.308 30.769 0.00 0.00 32.57 1.28
211 212 9.787435 AATTCGCCAAAATAGTGACCTATAATA 57.213 29.630 0.00 0.00 32.57 0.98
212 213 8.827177 TTCGCCAAAATAGTGACCTATAATAG 57.173 34.615 0.00 0.00 32.57 1.73
213 214 6.872020 TCGCCAAAATAGTGACCTATAATAGC 59.128 38.462 0.00 0.00 32.57 2.97
214 215 6.649141 CGCCAAAATAGTGACCTATAATAGCA 59.351 38.462 0.00 0.00 32.57 3.49
215 216 7.172532 CGCCAAAATAGTGACCTATAATAGCAA 59.827 37.037 0.00 0.00 32.57 3.91
216 217 8.846211 GCCAAAATAGTGACCTATAATAGCAAA 58.154 33.333 0.00 0.00 32.57 3.68
236 237 8.141835 AGCAAATAAATTTTGTCTTTTTCGCT 57.858 26.923 0.00 0.00 0.00 4.93
237 238 8.063630 AGCAAATAAATTTTGTCTTTTTCGCTG 58.936 29.630 0.00 0.00 0.00 5.18
238 239 7.850492 GCAAATAAATTTTGTCTTTTTCGCTGT 59.150 29.630 0.00 0.00 0.00 4.40
239 240 9.146270 CAAATAAATTTTGTCTTTTTCGCTGTG 57.854 29.630 0.00 0.00 0.00 3.66
240 241 8.641499 AATAAATTTTGTCTTTTTCGCTGTGA 57.359 26.923 0.00 0.00 0.00 3.58
241 242 6.959671 AAATTTTGTCTTTTTCGCTGTGAA 57.040 29.167 0.00 0.00 33.85 3.18
242 243 6.573617 AATTTTGTCTTTTTCGCTGTGAAG 57.426 33.333 3.65 0.00 37.99 3.02
243 244 4.695217 TTTGTCTTTTTCGCTGTGAAGT 57.305 36.364 3.65 0.00 37.99 3.01
244 245 3.944422 TGTCTTTTTCGCTGTGAAGTC 57.056 42.857 3.65 0.00 37.99 3.01
245 246 3.266636 TGTCTTTTTCGCTGTGAAGTCA 58.733 40.909 3.65 0.00 37.99 3.41
246 247 3.687212 TGTCTTTTTCGCTGTGAAGTCAA 59.313 39.130 3.65 0.00 37.99 3.18
247 248 4.029043 GTCTTTTTCGCTGTGAAGTCAAC 58.971 43.478 3.65 0.00 37.99 3.18
248 249 3.687212 TCTTTTTCGCTGTGAAGTCAACA 59.313 39.130 3.65 0.00 37.99 3.33
249 250 4.335315 TCTTTTTCGCTGTGAAGTCAACAT 59.665 37.500 3.65 0.00 37.99 2.71
250 251 4.630894 TTTTCGCTGTGAAGTCAACATT 57.369 36.364 3.65 0.00 37.99 2.71
251 252 3.607422 TTCGCTGTGAAGTCAACATTG 57.393 42.857 0.00 0.00 31.44 2.82
252 253 1.872952 TCGCTGTGAAGTCAACATTGG 59.127 47.619 0.00 0.00 0.00 3.16
253 254 1.603802 CGCTGTGAAGTCAACATTGGT 59.396 47.619 0.00 0.00 0.00 3.67
254 255 2.033299 CGCTGTGAAGTCAACATTGGTT 59.967 45.455 0.00 0.00 37.87 3.67
255 256 3.489059 CGCTGTGAAGTCAACATTGGTTT 60.489 43.478 0.00 0.00 34.21 3.27
256 257 4.432712 GCTGTGAAGTCAACATTGGTTTT 58.567 39.130 0.00 0.00 34.21 2.43
257 258 4.268405 GCTGTGAAGTCAACATTGGTTTTG 59.732 41.667 0.00 0.00 34.21 2.44
258 259 5.398603 TGTGAAGTCAACATTGGTTTTGT 57.601 34.783 0.00 0.00 34.21 2.83
259 260 5.788450 TGTGAAGTCAACATTGGTTTTGTT 58.212 33.333 0.00 0.00 37.79 2.83
260 261 6.226787 TGTGAAGTCAACATTGGTTTTGTTT 58.773 32.000 0.00 0.00 35.18 2.83
261 262 6.708054 TGTGAAGTCAACATTGGTTTTGTTTT 59.292 30.769 0.00 0.00 35.18 2.43
262 263 7.095439 TGTGAAGTCAACATTGGTTTTGTTTTC 60.095 33.333 0.00 0.00 35.18 2.29
263 264 6.090088 TGAAGTCAACATTGGTTTTGTTTTCG 59.910 34.615 0.00 0.00 35.18 3.46
264 265 5.474825 AGTCAACATTGGTTTTGTTTTCGT 58.525 33.333 0.00 0.00 35.18 3.85
265 266 5.347364 AGTCAACATTGGTTTTGTTTTCGTG 59.653 36.000 0.00 0.00 35.18 4.35
266 267 4.627467 TCAACATTGGTTTTGTTTTCGTGG 59.373 37.500 0.00 0.00 35.18 4.94
267 268 4.457834 ACATTGGTTTTGTTTTCGTGGA 57.542 36.364 0.00 0.00 0.00 4.02
268 269 4.822026 ACATTGGTTTTGTTTTCGTGGAA 58.178 34.783 0.00 0.00 0.00 3.53
269 270 5.238583 ACATTGGTTTTGTTTTCGTGGAAA 58.761 33.333 0.00 0.00 0.00 3.13
270 271 5.877564 ACATTGGTTTTGTTTTCGTGGAAAT 59.122 32.000 0.00 0.00 31.34 2.17
271 272 6.372937 ACATTGGTTTTGTTTTCGTGGAAATT 59.627 30.769 0.00 0.00 31.34 1.82
272 273 6.803154 TTGGTTTTGTTTTCGTGGAAATTT 57.197 29.167 0.00 0.00 31.34 1.82
273 274 7.900782 TTGGTTTTGTTTTCGTGGAAATTTA 57.099 28.000 0.00 0.00 31.34 1.40
274 275 8.494016 TTGGTTTTGTTTTCGTGGAAATTTAT 57.506 26.923 0.00 0.00 31.34 1.40
275 276 9.595823 TTGGTTTTGTTTTCGTGGAAATTTATA 57.404 25.926 0.00 0.00 31.34 0.98
276 277 9.765795 TGGTTTTGTTTTCGTGGAAATTTATAT 57.234 25.926 0.00 0.00 31.34 0.86
285 286 9.602568 TTTCGTGGAAATTTATATACTAGTGCA 57.397 29.630 5.39 0.00 0.00 4.57
286 287 9.602568 TTCGTGGAAATTTATATACTAGTGCAA 57.397 29.630 5.39 0.00 0.00 4.08
287 288 9.602568 TCGTGGAAATTTATATACTAGTGCAAA 57.397 29.630 5.39 0.89 0.00 3.68
288 289 9.864034 CGTGGAAATTTATATACTAGTGCAAAG 57.136 33.333 5.39 0.00 0.00 2.77
290 291 8.846211 TGGAAATTTATATACTAGTGCAAAGGC 58.154 33.333 5.39 0.00 41.68 4.35
301 302 3.384816 GCAAAGGCAAGCCAAGTTT 57.615 47.368 14.40 2.42 40.72 2.66
302 303 2.524569 GCAAAGGCAAGCCAAGTTTA 57.475 45.000 14.40 0.00 40.72 2.01
303 304 3.044235 GCAAAGGCAAGCCAAGTTTAT 57.956 42.857 14.40 0.00 40.72 1.40
304 305 3.402110 GCAAAGGCAAGCCAAGTTTATT 58.598 40.909 14.40 0.00 40.72 1.40
305 306 3.814842 GCAAAGGCAAGCCAAGTTTATTT 59.185 39.130 14.40 0.18 40.72 1.40
306 307 4.275689 GCAAAGGCAAGCCAAGTTTATTTT 59.724 37.500 14.40 0.00 40.72 1.82
307 308 5.468409 GCAAAGGCAAGCCAAGTTTATTTTA 59.532 36.000 14.40 0.00 40.72 1.52
308 309 6.017523 GCAAAGGCAAGCCAAGTTTATTTTAA 60.018 34.615 14.40 0.00 40.72 1.52
309 310 7.467947 GCAAAGGCAAGCCAAGTTTATTTTAAA 60.468 33.333 14.40 0.00 40.72 1.52
310 311 8.401709 CAAAGGCAAGCCAAGTTTATTTTAAAA 58.598 29.630 14.40 2.51 38.92 1.52
311 312 8.512966 AAGGCAAGCCAAGTTTATTTTAAAAA 57.487 26.923 14.40 0.00 38.92 1.94
384 385 9.042450 CCATATAGGGTGTATATACAAACAGGA 57.958 37.037 17.07 3.13 38.04 3.86
387 388 5.997843 AGGGTGTATATACAAACAGGAACC 58.002 41.667 17.07 10.97 38.04 3.62
388 389 5.489637 AGGGTGTATATACAAACAGGAACCA 59.510 40.000 17.07 0.00 38.04 3.67
389 390 6.012333 AGGGTGTATATACAAACAGGAACCAA 60.012 38.462 17.07 0.00 38.04 3.67
390 391 6.660094 GGGTGTATATACAAACAGGAACCAAA 59.340 38.462 17.07 0.00 38.04 3.28
391 392 7.148137 GGGTGTATATACAAACAGGAACCAAAG 60.148 40.741 17.07 0.00 38.04 2.77
392 393 7.148137 GGTGTATATACAAACAGGAACCAAAGG 60.148 40.741 17.07 0.00 38.04 3.11
393 394 6.887545 TGTATATACAAACAGGAACCAAAGGG 59.112 38.462 13.24 0.00 34.90 3.95
394 395 7.476520 TGTATATACAAACAGGAACCAAAGGGT 60.477 37.037 13.24 0.00 40.63 4.34
418 419 9.841295 GGTATTTCCCTACTAATGACACATTAA 57.159 33.333 0.00 0.00 0.00 1.40
423 424 9.832445 TTCCCTACTAATGACACATTAATCTTC 57.168 33.333 0.00 0.00 0.00 2.87
424 425 8.988060 TCCCTACTAATGACACATTAATCTTCA 58.012 33.333 0.00 0.00 0.00 3.02
425 426 9.265901 CCCTACTAATGACACATTAATCTTCAG 57.734 37.037 0.00 0.00 0.00 3.02
432 433 9.471702 AATGACACATTAATCTTCAGAATTCCT 57.528 29.630 0.65 0.00 0.00 3.36
452 453 5.838955 TCCTATAGAAGAACAACAGGAGGA 58.161 41.667 0.00 0.00 0.00 3.71
485 486 2.502538 ACATGCCTTGCAAAATGCCTAT 59.497 40.909 13.55 1.11 44.23 2.57
487 488 4.202182 ACATGCCTTGCAAAATGCCTATAG 60.202 41.667 13.55 0.00 44.23 1.31
488 489 3.630168 TGCCTTGCAAAATGCCTATAGA 58.370 40.909 0.00 0.00 44.23 1.98
490 491 4.098349 TGCCTTGCAAAATGCCTATAGAAG 59.902 41.667 0.00 0.00 44.23 2.85
491 492 4.339247 GCCTTGCAAAATGCCTATAGAAGA 59.661 41.667 0.00 0.00 44.23 2.87
493 494 6.268566 CCTTGCAAAATGCCTATAGAAGAAC 58.731 40.000 0.00 0.00 44.23 3.01
500 501 7.775053 AAATGCCTATAGAAGAACAACCAAA 57.225 32.000 0.00 0.00 0.00 3.28
510 511 6.856895 AGAAGAACAACCAAAAGAGAACAAG 58.143 36.000 0.00 0.00 0.00 3.16
556 557 3.066203 ACAACCAAAAGACGACACCATTC 59.934 43.478 0.00 0.00 0.00 2.67
559 560 3.951680 ACCAAAAGACGACACCATTCTTT 59.048 39.130 0.00 0.00 40.52 2.52
560 561 4.401202 ACCAAAAGACGACACCATTCTTTT 59.599 37.500 3.30 3.30 45.94 2.27
561 562 5.105513 ACCAAAAGACGACACCATTCTTTTT 60.106 36.000 5.94 0.00 43.73 1.94
578 579 2.781681 TTTTTGTTTTTGCGGGGGAA 57.218 40.000 0.00 0.00 0.00 3.97
579 580 2.781681 TTTTGTTTTTGCGGGGGAAA 57.218 40.000 0.00 0.00 0.00 3.13
580 581 2.781681 TTTGTTTTTGCGGGGGAAAA 57.218 40.000 0.00 0.00 31.48 2.29
581 582 2.317530 TTGTTTTTGCGGGGGAAAAG 57.682 45.000 0.00 0.00 34.65 2.27
582 583 1.486211 TGTTTTTGCGGGGGAAAAGA 58.514 45.000 0.00 0.00 34.65 2.52
583 584 1.137282 TGTTTTTGCGGGGGAAAAGAC 59.863 47.619 0.00 0.16 34.65 3.01
584 585 0.386113 TTTTTGCGGGGGAAAAGACG 59.614 50.000 0.00 0.00 34.65 4.18
585 586 0.465824 TTTTGCGGGGGAAAAGACGA 60.466 50.000 0.00 0.00 30.06 4.20
586 587 1.167781 TTTGCGGGGGAAAAGACGAC 61.168 55.000 0.00 0.00 0.00 4.34
587 588 2.031465 GCGGGGGAAAAGACGACA 59.969 61.111 0.00 0.00 0.00 4.35
588 589 2.322830 GCGGGGGAAAAGACGACAC 61.323 63.158 0.00 0.00 0.00 3.67
589 590 1.670083 CGGGGGAAAAGACGACACC 60.670 63.158 0.00 0.00 0.00 4.16
590 591 1.452801 GGGGGAAAAGACGACACCA 59.547 57.895 0.00 0.00 0.00 4.17
591 592 0.037734 GGGGGAAAAGACGACACCAT 59.962 55.000 0.00 0.00 0.00 3.55
592 593 1.450025 GGGGAAAAGACGACACCATC 58.550 55.000 0.00 0.00 0.00 3.51
593 594 1.271163 GGGGAAAAGACGACACCATCA 60.271 52.381 0.00 0.00 0.00 3.07
594 595 1.804748 GGGAAAAGACGACACCATCAC 59.195 52.381 0.00 0.00 0.00 3.06
595 596 2.550208 GGGAAAAGACGACACCATCACT 60.550 50.000 0.00 0.00 0.00 3.41
596 597 2.480419 GGAAAAGACGACACCATCACTG 59.520 50.000 0.00 0.00 0.00 3.66
597 598 2.910688 AAAGACGACACCATCACTGT 57.089 45.000 0.00 0.00 0.00 3.55
598 599 4.304110 GAAAAGACGACACCATCACTGTA 58.696 43.478 0.00 0.00 0.00 2.74
599 600 3.299340 AAGACGACACCATCACTGTAC 57.701 47.619 0.00 0.00 0.00 2.90
600 601 1.544691 AGACGACACCATCACTGTACC 59.455 52.381 0.00 0.00 0.00 3.34
601 602 1.271379 GACGACACCATCACTGTACCA 59.729 52.381 0.00 0.00 0.00 3.25
602 603 1.689813 ACGACACCATCACTGTACCAA 59.310 47.619 0.00 0.00 0.00 3.67
603 604 2.103432 ACGACACCATCACTGTACCAAA 59.897 45.455 0.00 0.00 0.00 3.28
604 605 3.135225 CGACACCATCACTGTACCAAAA 58.865 45.455 0.00 0.00 0.00 2.44
605 606 3.562141 CGACACCATCACTGTACCAAAAA 59.438 43.478 0.00 0.00 0.00 1.94
606 607 4.215399 CGACACCATCACTGTACCAAAAAT 59.785 41.667 0.00 0.00 0.00 1.82
607 608 5.410132 CGACACCATCACTGTACCAAAAATA 59.590 40.000 0.00 0.00 0.00 1.40
608 609 6.402118 CGACACCATCACTGTACCAAAAATAG 60.402 42.308 0.00 0.00 0.00 1.73
609 610 6.539173 ACACCATCACTGTACCAAAAATAGA 58.461 36.000 0.00 0.00 0.00 1.98
610 611 7.001674 ACACCATCACTGTACCAAAAATAGAA 58.998 34.615 0.00 0.00 0.00 2.10
611 612 7.504238 ACACCATCACTGTACCAAAAATAGAAA 59.496 33.333 0.00 0.00 0.00 2.52
612 613 8.522830 CACCATCACTGTACCAAAAATAGAAAT 58.477 33.333 0.00 0.00 0.00 2.17
613 614 8.739972 ACCATCACTGTACCAAAAATAGAAATC 58.260 33.333 0.00 0.00 0.00 2.17
614 615 8.739039 CCATCACTGTACCAAAAATAGAAATCA 58.261 33.333 0.00 0.00 0.00 2.57
615 616 9.778993 CATCACTGTACCAAAAATAGAAATCAG 57.221 33.333 0.00 0.00 0.00 2.90
616 617 8.335532 TCACTGTACCAAAAATAGAAATCAGG 57.664 34.615 0.00 0.00 0.00 3.86
630 631 3.569916 TCAGGATGATCGCGCTAAC 57.430 52.632 5.56 0.00 42.56 2.34
641 642 0.299003 CGCGCTAACTTTCTAGCAGC 59.701 55.000 5.56 6.45 43.84 5.25
759 1688 9.855021 CTTTAGACTTTCAGGAAGAAACAAAAA 57.145 29.630 0.00 0.00 41.17 1.94
763 1692 7.611855 AGACTTTCAGGAAGAAACAAAAAGAGA 59.388 33.333 0.00 0.00 41.17 3.10
822 1829 0.749818 TTCAGCCCGCAACAGACAAA 60.750 50.000 0.00 0.00 0.00 2.83
976 1984 0.394565 CCGCATTCCCCAACCAAAAA 59.605 50.000 0.00 0.00 0.00 1.94
2118 3126 0.257039 ATGGTGCAGATGGGGAGAAC 59.743 55.000 0.00 0.00 0.00 3.01
2127 3135 1.974236 GATGGGGAGAACGAGGATGAT 59.026 52.381 0.00 0.00 0.00 2.45
2214 3222 1.098712 AGGAGAGCGATGACGAGGAC 61.099 60.000 0.00 0.00 42.66 3.85
2271 3279 3.211045 AGCCGCTAACTGAAACAAGAAA 58.789 40.909 0.00 0.00 0.00 2.52
2312 3320 1.246649 GATGTTGGTGGTGATGTGCA 58.753 50.000 0.00 0.00 0.00 4.57
2400 3408 5.422214 ACCAAACCTACTAGAAGATGGTG 57.578 43.478 0.00 0.00 0.00 4.17
2481 3489 0.767998 TGTACCATGGTGGCTTCACA 59.232 50.000 28.17 18.93 42.67 3.58
2490 3498 5.184864 CCATGGTGGCTTCACATAAGTTAAA 59.815 40.000 2.57 0.00 42.91 1.52
2552 3560 3.982475 TGATAGCTTATTGCCACTCTCG 58.018 45.455 0.00 0.00 44.23 4.04
2557 3565 1.003116 CTTATTGCCACTCTCGCATGC 60.003 52.381 7.91 7.91 35.83 4.06
2563 3571 1.376543 CCACTCTCGCATGCTCAATT 58.623 50.000 17.13 0.00 0.00 2.32
2617 3626 7.335673 TGCAAATTTATCCTTCGTGTTCTGATA 59.664 33.333 0.00 0.00 0.00 2.15
2660 3671 5.482878 AGCAAATCAATTGAGGTGATCCTTT 59.517 36.000 20.05 8.82 45.24 3.11
2661 3672 6.013984 AGCAAATCAATTGAGGTGATCCTTTT 60.014 34.615 20.05 8.23 45.24 2.27
2671 3682 7.027874 TGAGGTGATCCTTTTTATAGGTTGT 57.972 36.000 0.00 0.00 45.24 3.32
2784 3795 6.798427 TGCTCCTGACTTACTAATGAGAAT 57.202 37.500 0.00 0.00 0.00 2.40
2823 3834 9.257651 GGATACCGCATAATATTAATGTACTCC 57.742 37.037 0.00 0.00 0.00 3.85
2824 3835 9.257651 GATACCGCATAATATTAATGTACTCCC 57.742 37.037 0.00 0.00 0.00 4.30
2825 3836 7.253905 ACCGCATAATATTAATGTACTCCCT 57.746 36.000 0.00 0.00 0.00 4.20
2826 3837 7.328737 ACCGCATAATATTAATGTACTCCCTC 58.671 38.462 0.00 0.00 0.00 4.30
2827 3838 6.761714 CCGCATAATATTAATGTACTCCCTCC 59.238 42.308 0.00 0.00 0.00 4.30
2828 3839 6.475727 CGCATAATATTAATGTACTCCCTCCG 59.524 42.308 0.00 0.00 0.00 4.63
2829 3840 7.328737 GCATAATATTAATGTACTCCCTCCGT 58.671 38.462 0.00 0.00 0.00 4.69
2830 3841 7.822822 GCATAATATTAATGTACTCCCTCCGTT 59.177 37.037 0.00 0.00 0.00 4.44
2831 3842 9.367444 CATAATATTAATGTACTCCCTCCGTTC 57.633 37.037 0.00 0.00 0.00 3.95
2832 3843 4.684484 ATTAATGTACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
2833 3844 1.201424 AATGTACTCCCTCCGTTCCC 58.799 55.000 0.00 0.00 0.00 3.97
2834 3845 0.042131 ATGTACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
2835 3846 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
2836 3847 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
2837 3848 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
2838 3849 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2839 3850 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2840 3851 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
2841 3852 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
2842 3853 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
2843 3854 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
2844 3855 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
2845 3856 4.056050 CCTCCGTTCCCAAATATAAGTCG 58.944 47.826 0.00 0.00 0.00 4.18
2846 3857 4.442472 CCTCCGTTCCCAAATATAAGTCGT 60.442 45.833 0.00 0.00 0.00 4.34
2847 3858 5.088680 TCCGTTCCCAAATATAAGTCGTT 57.911 39.130 0.00 0.00 0.00 3.85
2848 3859 5.490159 TCCGTTCCCAAATATAAGTCGTTT 58.510 37.500 0.00 0.00 0.00 3.60
2849 3860 5.939296 TCCGTTCCCAAATATAAGTCGTTTT 59.061 36.000 0.00 0.00 0.00 2.43
2850 3861 7.102346 TCCGTTCCCAAATATAAGTCGTTTTA 58.898 34.615 0.00 0.00 0.00 1.52
2851 3862 7.278424 TCCGTTCCCAAATATAAGTCGTTTTAG 59.722 37.037 0.00 0.00 0.00 1.85
2852 3863 7.278424 CCGTTCCCAAATATAAGTCGTTTTAGA 59.722 37.037 0.00 0.00 0.00 2.10
2853 3864 8.325997 CGTTCCCAAATATAAGTCGTTTTAGAG 58.674 37.037 0.00 0.00 0.00 2.43
2854 3865 9.374838 GTTCCCAAATATAAGTCGTTTTAGAGA 57.625 33.333 0.00 0.00 0.00 3.10
2865 3876 7.190920 AGTCGTTTTAGAGATTTCAACAAGG 57.809 36.000 0.00 0.00 0.00 3.61
2866 3877 6.204882 AGTCGTTTTAGAGATTTCAACAAGGG 59.795 38.462 0.00 0.00 0.00 3.95
2867 3878 5.472137 TCGTTTTAGAGATTTCAACAAGGGG 59.528 40.000 0.00 0.00 0.00 4.79
2868 3879 5.472137 CGTTTTAGAGATTTCAACAAGGGGA 59.528 40.000 0.00 0.00 0.00 4.81
2869 3880 6.567891 CGTTTTAGAGATTTCAACAAGGGGAC 60.568 42.308 0.00 0.00 0.00 4.46
2871 3882 6.945636 TTAGAGATTTCAACAAGGGGACTA 57.054 37.500 0.00 0.00 42.68 2.59
2872 3883 5.167303 AGAGATTTCAACAAGGGGACTAC 57.833 43.478 0.00 0.00 42.68 2.73
2873 3884 4.597507 AGAGATTTCAACAAGGGGACTACA 59.402 41.667 0.00 0.00 42.68 2.74
2874 3885 5.251700 AGAGATTTCAACAAGGGGACTACAT 59.748 40.000 0.00 0.00 42.68 2.29
2875 3886 6.443849 AGAGATTTCAACAAGGGGACTACATA 59.556 38.462 0.00 0.00 42.68 2.29
2876 3887 6.415573 AGATTTCAACAAGGGGACTACATAC 58.584 40.000 0.00 0.00 42.68 2.39
2877 3888 3.880047 TCAACAAGGGGACTACATACG 57.120 47.619 0.00 0.00 42.68 3.06
2878 3889 2.498481 TCAACAAGGGGACTACATACGG 59.502 50.000 0.00 0.00 42.68 4.02
2879 3890 2.498481 CAACAAGGGGACTACATACGGA 59.502 50.000 0.00 0.00 42.68 4.69
2880 3891 2.385803 ACAAGGGGACTACATACGGAG 58.614 52.381 0.00 0.00 42.68 4.63
2881 3892 1.068741 CAAGGGGACTACATACGGAGC 59.931 57.143 0.00 0.00 42.68 4.70
2882 3893 0.260816 AGGGGACTACATACGGAGCA 59.739 55.000 0.00 0.00 40.61 4.26
2883 3894 1.117150 GGGGACTACATACGGAGCAA 58.883 55.000 0.00 0.00 0.00 3.91
2884 3895 1.483415 GGGGACTACATACGGAGCAAA 59.517 52.381 0.00 0.00 0.00 3.68
2885 3896 2.093341 GGGGACTACATACGGAGCAAAA 60.093 50.000 0.00 0.00 0.00 2.44
2886 3897 3.433173 GGGGACTACATACGGAGCAAAAT 60.433 47.826 0.00 0.00 0.00 1.82
2887 3898 3.560068 GGGACTACATACGGAGCAAAATG 59.440 47.826 0.00 0.00 0.00 2.32
2888 3899 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
2889 3900 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2890 3901 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2891 3902 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2892 3903 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2893 3904 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2894 3905 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2895 3906 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2896 3907 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2897 3908 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2898 3909 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2899 3910 4.259970 CGGAGCAAAATGAGTGAATCTACG 60.260 45.833 0.00 0.00 0.00 3.51
2900 3911 4.494855 GGAGCAAAATGAGTGAATCTACGC 60.495 45.833 0.00 0.00 0.00 4.42
2901 3912 4.256920 AGCAAAATGAGTGAATCTACGCT 58.743 39.130 0.00 0.00 0.00 5.07
2902 3913 4.331168 AGCAAAATGAGTGAATCTACGCTC 59.669 41.667 0.00 0.00 44.55 5.03
2903 3914 4.331168 GCAAAATGAGTGAATCTACGCTCT 59.669 41.667 0.00 0.00 44.58 4.09
2904 3915 5.520288 GCAAAATGAGTGAATCTACGCTCTA 59.480 40.000 0.00 0.00 44.58 2.43
2905 3916 6.036083 GCAAAATGAGTGAATCTACGCTCTAA 59.964 38.462 0.00 0.00 44.58 2.10
2906 3917 7.413000 GCAAAATGAGTGAATCTACGCTCTAAA 60.413 37.037 0.00 0.00 44.58 1.85
2907 3918 7.763172 AAATGAGTGAATCTACGCTCTAAAG 57.237 36.000 0.00 0.00 44.58 1.85
2908 3919 5.899120 TGAGTGAATCTACGCTCTAAAGT 57.101 39.130 0.00 0.00 44.58 2.66
2909 3920 6.997239 TGAGTGAATCTACGCTCTAAAGTA 57.003 37.500 0.00 0.00 44.58 2.24
2910 3921 7.569639 TGAGTGAATCTACGCTCTAAAGTAT 57.430 36.000 0.00 0.00 44.58 2.12
2911 3922 7.418408 TGAGTGAATCTACGCTCTAAAGTATG 58.582 38.462 0.00 0.00 44.58 2.39
2912 3923 7.067129 TGAGTGAATCTACGCTCTAAAGTATGT 59.933 37.037 0.00 0.00 44.58 2.29
2913 3924 7.419204 AGTGAATCTACGCTCTAAAGTATGTC 58.581 38.462 0.00 0.00 0.00 3.06
2914 3925 7.283580 AGTGAATCTACGCTCTAAAGTATGTCT 59.716 37.037 0.00 0.00 0.00 3.41
2915 3926 8.557864 GTGAATCTACGCTCTAAAGTATGTCTA 58.442 37.037 0.00 0.00 0.00 2.59
2916 3927 9.286170 TGAATCTACGCTCTAAAGTATGTCTAT 57.714 33.333 0.00 0.00 0.00 1.98
2920 3931 8.666573 TCTACGCTCTAAAGTATGTCTATATGC 58.333 37.037 0.00 0.00 0.00 3.14
2921 3932 7.215719 ACGCTCTAAAGTATGTCTATATGCA 57.784 36.000 0.00 0.00 0.00 3.96
2922 3933 7.831753 ACGCTCTAAAGTATGTCTATATGCAT 58.168 34.615 3.79 3.79 0.00 3.96
2923 3934 7.971168 ACGCTCTAAAGTATGTCTATATGCATC 59.029 37.037 0.19 0.00 0.00 3.91
2924 3935 7.433719 CGCTCTAAAGTATGTCTATATGCATCC 59.566 40.741 0.19 0.00 0.00 3.51
2925 3936 7.433719 GCTCTAAAGTATGTCTATATGCATCCG 59.566 40.741 0.19 0.00 0.00 4.18
2926 3937 8.349568 TCTAAAGTATGTCTATATGCATCCGT 57.650 34.615 0.19 0.00 0.00 4.69
2927 3938 9.457436 TCTAAAGTATGTCTATATGCATCCGTA 57.543 33.333 0.19 0.00 0.00 4.02
2933 3944 9.967346 GTATGTCTATATGCATCCGTATATTGT 57.033 33.333 0.19 0.00 33.15 2.71
2936 3947 9.185680 TGTCTATATGCATCCGTATATTGTAGT 57.814 33.333 0.19 0.00 33.15 2.73
2937 3948 9.666626 GTCTATATGCATCCGTATATTGTAGTC 57.333 37.037 0.19 0.00 33.15 2.59
2938 3949 8.847196 TCTATATGCATCCGTATATTGTAGTCC 58.153 37.037 0.19 0.00 33.15 3.85
2939 3950 5.738619 ATGCATCCGTATATTGTAGTCCA 57.261 39.130 0.00 0.00 0.00 4.02
2940 3951 5.738619 TGCATCCGTATATTGTAGTCCAT 57.261 39.130 0.00 0.00 0.00 3.41
2941 3952 6.109156 TGCATCCGTATATTGTAGTCCATT 57.891 37.500 0.00 0.00 0.00 3.16
2942 3953 6.530120 TGCATCCGTATATTGTAGTCCATTT 58.470 36.000 0.00 0.00 0.00 2.32
2943 3954 6.426633 TGCATCCGTATATTGTAGTCCATTTG 59.573 38.462 0.00 0.00 0.00 2.32
2944 3955 6.649141 GCATCCGTATATTGTAGTCCATTTGA 59.351 38.462 0.00 0.00 0.00 2.69
2945 3956 7.172532 GCATCCGTATATTGTAGTCCATTTGAA 59.827 37.037 0.00 0.00 0.00 2.69
2946 3957 9.051679 CATCCGTATATTGTAGTCCATTTGAAA 57.948 33.333 0.00 0.00 0.00 2.69
2947 3958 8.428186 TCCGTATATTGTAGTCCATTTGAAAC 57.572 34.615 0.00 0.00 0.00 2.78
2948 3959 7.496591 TCCGTATATTGTAGTCCATTTGAAACC 59.503 37.037 0.00 0.00 0.00 3.27
2949 3960 7.497909 CCGTATATTGTAGTCCATTTGAAACCT 59.502 37.037 0.00 0.00 0.00 3.50
2950 3961 8.548721 CGTATATTGTAGTCCATTTGAAACCTC 58.451 37.037 0.00 0.00 0.00 3.85
2951 3962 9.614792 GTATATTGTAGTCCATTTGAAACCTCT 57.385 33.333 0.00 0.00 0.00 3.69
2954 3965 8.934023 ATTGTAGTCCATTTGAAACCTCTAAA 57.066 30.769 0.00 0.00 0.00 1.85
2955 3966 8.754991 TTGTAGTCCATTTGAAACCTCTAAAA 57.245 30.769 0.00 0.00 0.00 1.52
2956 3967 8.754991 TGTAGTCCATTTGAAACCTCTAAAAA 57.245 30.769 0.00 0.00 0.00 1.94
2957 3968 8.846211 TGTAGTCCATTTGAAACCTCTAAAAAG 58.154 33.333 0.00 0.00 0.00 2.27
2958 3969 9.063615 GTAGTCCATTTGAAACCTCTAAAAAGA 57.936 33.333 0.00 0.00 0.00 2.52
2959 3970 7.941919 AGTCCATTTGAAACCTCTAAAAAGAC 58.058 34.615 0.00 0.00 0.00 3.01
2960 3971 7.780271 AGTCCATTTGAAACCTCTAAAAAGACT 59.220 33.333 0.00 0.00 0.00 3.24
2961 3972 8.414003 GTCCATTTGAAACCTCTAAAAAGACTT 58.586 33.333 0.00 0.00 0.00 3.01
2962 3973 9.635404 TCCATTTGAAACCTCTAAAAAGACTTA 57.365 29.630 0.00 0.00 0.00 2.24
2979 3990 8.959705 AAAGACTTATATTTAGAAACGGAGGG 57.040 34.615 0.00 0.00 0.00 4.30
2980 3991 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
2981 3992 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
2982 3993 7.564292 AGACTTATATTTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
2983 3994 8.773033 ACTTATATTTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
2984 3995 8.637099 ACTTATATTTAGAAACGGAGGGAGTAC 58.363 37.037 0.00 0.00 0.00 2.73
2985 3996 8.537728 TTATATTTAGAAACGGAGGGAGTACA 57.462 34.615 0.00 0.00 0.00 2.90
2992 4003 1.825474 ACGGAGGGAGTACATGACAAG 59.175 52.381 0.00 0.00 0.00 3.16
3091 4124 9.933723 CATGAGAATAAAAATGAAACCCTTCTT 57.066 29.630 0.00 0.00 32.33 2.52
3106 4139 3.125316 CCCTTCTTTTTCATCTCCGTTCG 59.875 47.826 0.00 0.00 0.00 3.95
3110 4143 3.932710 TCTTTTTCATCTCCGTTCGGATG 59.067 43.478 14.34 10.86 40.23 3.51
3143 4176 8.964476 AATTGCTGCATTAACTGTACTAGTAT 57.036 30.769 5.75 0.00 39.18 2.12
3157 4190 8.145767 ACTGTACTAGTATAAACTGCAAACACA 58.854 33.333 5.75 0.00 38.04 3.72
3172 4205 4.320608 AAACACAGGGTAATGTTTGCAG 57.679 40.909 1.76 0.00 45.09 4.41
3249 4282 6.840780 TGACAACAGTTCTCATCTATCTGA 57.159 37.500 0.00 0.00 0.00 3.27
3250 4283 6.625362 TGACAACAGTTCTCATCTATCTGAC 58.375 40.000 0.00 0.00 0.00 3.51
3251 4284 6.209391 TGACAACAGTTCTCATCTATCTGACA 59.791 38.462 0.00 0.00 0.00 3.58
3252 4285 6.997655 ACAACAGTTCTCATCTATCTGACAA 58.002 36.000 0.00 0.00 0.00 3.18
3253 4286 6.870965 ACAACAGTTCTCATCTATCTGACAAC 59.129 38.462 0.00 0.00 0.00 3.32
3254 4287 6.596309 ACAGTTCTCATCTATCTGACAACA 57.404 37.500 0.00 0.00 29.51 3.33
3255 4288 6.997655 ACAGTTCTCATCTATCTGACAACAA 58.002 36.000 0.00 0.00 29.51 2.83
3256 4289 7.095910 ACAGTTCTCATCTATCTGACAACAAG 58.904 38.462 0.00 0.00 29.51 3.16
3257 4290 7.039434 ACAGTTCTCATCTATCTGACAACAAGA 60.039 37.037 0.00 0.00 29.51 3.02
3258 4291 7.980662 CAGTTCTCATCTATCTGACAACAAGAT 59.019 37.037 0.00 0.00 29.51 2.40
3259 4292 9.194972 AGTTCTCATCTATCTGACAACAAGATA 57.805 33.333 0.00 0.00 29.51 1.98
3260 4293 9.979578 GTTCTCATCTATCTGACAACAAGATAT 57.020 33.333 0.00 0.00 28.18 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.092049 ACCAAAAGTTCCCCTCTTTCGT 60.092 45.455 0.00 0.00 34.59 3.85
1 2 2.552743 GACCAAAAGTTCCCCTCTTTCG 59.447 50.000 0.00 0.00 34.59 3.46
2 3 3.833732 AGACCAAAAGTTCCCCTCTTTC 58.166 45.455 0.00 0.00 34.59 2.62
3 4 3.973472 AGACCAAAAGTTCCCCTCTTT 57.027 42.857 0.00 0.00 36.81 2.52
4 5 3.244457 CGTAGACCAAAAGTTCCCCTCTT 60.244 47.826 0.00 0.00 0.00 2.85
5 6 2.302157 CGTAGACCAAAAGTTCCCCTCT 59.698 50.000 0.00 0.00 0.00 3.69
6 7 2.614734 CCGTAGACCAAAAGTTCCCCTC 60.615 54.545 0.00 0.00 0.00 4.30
7 8 1.350019 CCGTAGACCAAAAGTTCCCCT 59.650 52.381 0.00 0.00 0.00 4.79
8 9 1.612462 CCCGTAGACCAAAAGTTCCCC 60.612 57.143 0.00 0.00 0.00 4.81
9 10 1.612462 CCCCGTAGACCAAAAGTTCCC 60.612 57.143 0.00 0.00 0.00 3.97
10 11 1.348696 TCCCCGTAGACCAAAAGTTCC 59.651 52.381 0.00 0.00 0.00 3.62
11 12 2.224354 TGTCCCCGTAGACCAAAAGTTC 60.224 50.000 0.16 0.00 35.83 3.01
12 13 1.770061 TGTCCCCGTAGACCAAAAGTT 59.230 47.619 0.16 0.00 35.83 2.66
13 14 1.426751 TGTCCCCGTAGACCAAAAGT 58.573 50.000 0.16 0.00 35.83 2.66
14 15 2.290071 ACATGTCCCCGTAGACCAAAAG 60.290 50.000 0.00 0.00 35.83 2.27
15 16 1.700739 ACATGTCCCCGTAGACCAAAA 59.299 47.619 0.00 0.00 35.83 2.44
16 17 1.354101 ACATGTCCCCGTAGACCAAA 58.646 50.000 0.00 0.00 35.83 3.28
17 18 1.826720 GTACATGTCCCCGTAGACCAA 59.173 52.381 0.00 0.00 35.83 3.67
18 19 1.272592 TGTACATGTCCCCGTAGACCA 60.273 52.381 0.00 0.00 35.83 4.02
19 20 1.135721 GTGTACATGTCCCCGTAGACC 59.864 57.143 0.00 0.00 35.83 3.85
20 21 1.135721 GGTGTACATGTCCCCGTAGAC 59.864 57.143 0.00 0.00 37.28 2.59
21 22 1.477553 GGTGTACATGTCCCCGTAGA 58.522 55.000 0.00 0.00 0.00 2.59
22 23 0.462789 GGGTGTACATGTCCCCGTAG 59.537 60.000 0.00 0.00 35.52 3.51
23 24 0.041535 AGGGTGTACATGTCCCCGTA 59.958 55.000 15.76 0.00 42.26 4.02
24 25 0.041535 TAGGGTGTACATGTCCCCGT 59.958 55.000 15.76 11.65 42.26 5.28
25 26 1.420430 ATAGGGTGTACATGTCCCCG 58.580 55.000 15.76 0.00 42.26 5.73
26 27 4.164981 TCATATAGGGTGTACATGTCCCC 58.835 47.826 15.76 16.25 41.95 4.81
27 28 6.374417 AATCATATAGGGTGTACATGTCCC 57.626 41.667 12.28 12.28 41.36 4.46
28 29 7.719633 ACAAAATCATATAGGGTGTACATGTCC 59.280 37.037 0.00 0.00 0.00 4.02
29 30 8.677148 ACAAAATCATATAGGGTGTACATGTC 57.323 34.615 0.00 0.00 0.00 3.06
62 63 8.749841 TCAGAATTTTTCGACTTTTTGTTGAA 57.250 26.923 0.00 0.00 44.79 2.69
63 64 8.749841 TTCAGAATTTTTCGACTTTTTGTTGA 57.250 26.923 0.00 0.00 37.30 3.18
64 65 9.804547 TTTTCAGAATTTTTCGACTTTTTGTTG 57.195 25.926 0.00 0.00 34.02 3.33
101 102 9.569122 ACAAGTACAATGTAAGGTCAAGTTTAT 57.431 29.630 0.00 0.00 0.00 1.40
102 103 8.832521 CACAAGTACAATGTAAGGTCAAGTTTA 58.167 33.333 0.00 0.00 0.00 2.01
103 104 7.554835 TCACAAGTACAATGTAAGGTCAAGTTT 59.445 33.333 0.00 0.00 0.00 2.66
104 105 7.051623 TCACAAGTACAATGTAAGGTCAAGTT 58.948 34.615 0.00 0.00 0.00 2.66
105 106 6.588204 TCACAAGTACAATGTAAGGTCAAGT 58.412 36.000 0.00 0.00 0.00 3.16
106 107 6.929049 TCTCACAAGTACAATGTAAGGTCAAG 59.071 38.462 0.00 0.00 0.00 3.02
107 108 6.822442 TCTCACAAGTACAATGTAAGGTCAA 58.178 36.000 0.00 0.00 0.00 3.18
108 109 6.413783 TCTCACAAGTACAATGTAAGGTCA 57.586 37.500 0.00 0.00 0.00 4.02
109 110 7.724305 TTTCTCACAAGTACAATGTAAGGTC 57.276 36.000 0.00 0.00 0.00 3.85
110 111 8.514330 TTTTTCTCACAAGTACAATGTAAGGT 57.486 30.769 0.00 0.00 0.00 3.50
111 112 9.965824 AATTTTTCTCACAAGTACAATGTAAGG 57.034 29.630 0.00 0.00 0.00 2.69
115 116 9.301153 GTGAAATTTTTCTCACAAGTACAATGT 57.699 29.630 3.61 0.00 41.35 2.71
116 117 9.299963 TGTGAAATTTTTCTCACAAGTACAATG 57.700 29.630 7.98 0.00 46.74 2.82
129 130 9.330063 GGGATTCTCTTTTTGTGAAATTTTTCT 57.670 29.630 4.80 0.00 38.02 2.52
130 131 8.559536 GGGGATTCTCTTTTTGTGAAATTTTTC 58.440 33.333 0.00 0.00 37.69 2.29
131 132 7.502226 GGGGGATTCTCTTTTTGTGAAATTTTT 59.498 33.333 0.00 0.00 32.80 1.94
132 133 6.998074 GGGGGATTCTCTTTTTGTGAAATTTT 59.002 34.615 0.00 0.00 32.80 1.82
133 134 6.329986 AGGGGGATTCTCTTTTTGTGAAATTT 59.670 34.615 0.00 0.00 32.80 1.82
134 135 5.846164 AGGGGGATTCTCTTTTTGTGAAATT 59.154 36.000 0.00 0.00 32.80 1.82
135 136 5.406163 AGGGGGATTCTCTTTTTGTGAAAT 58.594 37.500 0.00 0.00 32.80 2.17
136 137 4.814967 AGGGGGATTCTCTTTTTGTGAAA 58.185 39.130 0.00 0.00 32.80 2.69
137 138 4.469469 AGGGGGATTCTCTTTTTGTGAA 57.531 40.909 0.00 0.00 33.46 3.18
138 139 4.469469 AAGGGGGATTCTCTTTTTGTGA 57.531 40.909 0.00 0.00 0.00 3.58
139 140 4.588528 TCAAAGGGGGATTCTCTTTTTGTG 59.411 41.667 10.79 0.00 0.00 3.33
140 141 4.588951 GTCAAAGGGGGATTCTCTTTTTGT 59.411 41.667 10.79 0.00 0.00 2.83
141 142 4.835056 AGTCAAAGGGGGATTCTCTTTTTG 59.165 41.667 6.85 6.85 0.00 2.44
142 143 5.079998 AGTCAAAGGGGGATTCTCTTTTT 57.920 39.130 0.00 0.00 0.00 1.94
143 144 4.749048 AGTCAAAGGGGGATTCTCTTTT 57.251 40.909 0.00 0.00 0.00 2.27
144 145 4.355287 AGAAGTCAAAGGGGGATTCTCTTT 59.645 41.667 0.00 0.00 0.00 2.52
145 146 3.919554 AGAAGTCAAAGGGGGATTCTCTT 59.080 43.478 0.00 0.00 0.00 2.85
146 147 3.536287 AGAAGTCAAAGGGGGATTCTCT 58.464 45.455 0.00 0.00 0.00 3.10
147 148 4.308526 AAGAAGTCAAAGGGGGATTCTC 57.691 45.455 0.00 0.00 0.00 2.87
148 149 4.749048 AAAGAAGTCAAAGGGGGATTCT 57.251 40.909 0.00 0.00 0.00 2.40
149 150 4.832823 TGAAAAGAAGTCAAAGGGGGATTC 59.167 41.667 0.00 0.00 0.00 2.52
150 151 4.814967 TGAAAAGAAGTCAAAGGGGGATT 58.185 39.130 0.00 0.00 0.00 3.01
151 152 4.469469 TGAAAAGAAGTCAAAGGGGGAT 57.531 40.909 0.00 0.00 0.00 3.85
152 153 3.963476 TGAAAAGAAGTCAAAGGGGGA 57.037 42.857 0.00 0.00 0.00 4.81
153 154 5.351948 TTTTGAAAAGAAGTCAAAGGGGG 57.648 39.130 0.47 0.00 43.76 5.40
182 183 6.096673 AGGTCACTATTTTGGCGAATTTTT 57.903 33.333 0.00 0.00 0.00 1.94
183 184 5.722021 AGGTCACTATTTTGGCGAATTTT 57.278 34.783 0.00 0.00 0.00 1.82
184 185 8.514330 TTATAGGTCACTATTTTGGCGAATTT 57.486 30.769 0.00 0.00 40.35 1.82
185 186 8.691661 ATTATAGGTCACTATTTTGGCGAATT 57.308 30.769 0.00 0.00 40.35 2.17
186 187 9.436957 CTATTATAGGTCACTATTTTGGCGAAT 57.563 33.333 0.00 0.00 40.35 3.34
187 188 7.386848 GCTATTATAGGTCACTATTTTGGCGAA 59.613 37.037 1.12 0.00 40.35 4.70
188 189 6.872020 GCTATTATAGGTCACTATTTTGGCGA 59.128 38.462 1.12 0.00 40.35 5.54
189 190 6.649141 TGCTATTATAGGTCACTATTTTGGCG 59.351 38.462 1.12 0.00 40.35 5.69
190 191 7.979444 TGCTATTATAGGTCACTATTTTGGC 57.021 36.000 1.12 0.00 40.35 4.52
210 211 9.255304 AGCGAAAAAGACAAAATTTATTTGCTA 57.745 25.926 0.00 0.00 32.93 3.49
211 212 8.063630 CAGCGAAAAAGACAAAATTTATTTGCT 58.936 29.630 0.00 0.00 32.93 3.91
212 213 7.850492 ACAGCGAAAAAGACAAAATTTATTTGC 59.150 29.630 0.00 0.00 32.93 3.68
213 214 9.146270 CACAGCGAAAAAGACAAAATTTATTTG 57.854 29.630 0.00 0.00 35.64 2.32
214 215 9.092876 TCACAGCGAAAAAGACAAAATTTATTT 57.907 25.926 0.00 0.00 0.00 1.40
215 216 8.641499 TCACAGCGAAAAAGACAAAATTTATT 57.359 26.923 0.00 0.00 0.00 1.40
216 217 8.641499 TTCACAGCGAAAAAGACAAAATTTAT 57.359 26.923 0.00 0.00 0.00 1.40
217 218 7.757624 ACTTCACAGCGAAAAAGACAAAATTTA 59.242 29.630 0.00 0.00 31.71 1.40
218 219 6.589907 ACTTCACAGCGAAAAAGACAAAATTT 59.410 30.769 0.00 0.00 31.71 1.82
219 220 6.099341 ACTTCACAGCGAAAAAGACAAAATT 58.901 32.000 0.00 0.00 31.71 1.82
220 221 5.650543 ACTTCACAGCGAAAAAGACAAAAT 58.349 33.333 0.00 0.00 31.71 1.82
221 222 5.054390 ACTTCACAGCGAAAAAGACAAAA 57.946 34.783 0.00 0.00 31.71 2.44
222 223 4.155099 TGACTTCACAGCGAAAAAGACAAA 59.845 37.500 0.00 0.00 31.71 2.83
223 224 3.687212 TGACTTCACAGCGAAAAAGACAA 59.313 39.130 0.00 0.00 31.71 3.18
224 225 3.266636 TGACTTCACAGCGAAAAAGACA 58.733 40.909 0.00 0.00 31.71 3.41
225 226 3.944422 TGACTTCACAGCGAAAAAGAC 57.056 42.857 0.00 0.00 31.71 3.01
226 227 3.687212 TGTTGACTTCACAGCGAAAAAGA 59.313 39.130 0.00 0.00 31.71 2.52
227 228 4.014847 TGTTGACTTCACAGCGAAAAAG 57.985 40.909 0.00 0.00 31.71 2.27
228 229 4.630894 ATGTTGACTTCACAGCGAAAAA 57.369 36.364 0.00 0.00 31.71 1.94
229 230 4.350346 CAATGTTGACTTCACAGCGAAAA 58.650 39.130 0.00 0.00 31.71 2.29
230 231 3.243035 CCAATGTTGACTTCACAGCGAAA 60.243 43.478 0.00 0.00 31.71 3.46
231 232 2.290367 CCAATGTTGACTTCACAGCGAA 59.710 45.455 0.00 0.00 0.00 4.70
232 233 1.872952 CCAATGTTGACTTCACAGCGA 59.127 47.619 0.00 0.00 0.00 4.93
233 234 1.603802 ACCAATGTTGACTTCACAGCG 59.396 47.619 0.00 0.00 0.00 5.18
234 235 3.715628 AACCAATGTTGACTTCACAGC 57.284 42.857 0.00 0.00 32.13 4.40
235 236 5.410067 ACAAAACCAATGTTGACTTCACAG 58.590 37.500 0.00 0.00 34.13 3.66
236 237 5.398603 ACAAAACCAATGTTGACTTCACA 57.601 34.783 0.00 0.00 34.13 3.58
237 238 6.720012 AAACAAAACCAATGTTGACTTCAC 57.280 33.333 0.00 0.00 39.98 3.18
238 239 6.090088 CGAAAACAAAACCAATGTTGACTTCA 59.910 34.615 0.00 0.00 39.98 3.02
239 240 6.090223 ACGAAAACAAAACCAATGTTGACTTC 59.910 34.615 0.00 0.00 39.98 3.01
240 241 5.929415 ACGAAAACAAAACCAATGTTGACTT 59.071 32.000 0.00 0.00 39.98 3.01
241 242 5.347364 CACGAAAACAAAACCAATGTTGACT 59.653 36.000 0.00 0.00 39.98 3.41
242 243 5.445275 CCACGAAAACAAAACCAATGTTGAC 60.445 40.000 0.00 0.00 39.98 3.18
243 244 4.627467 CCACGAAAACAAAACCAATGTTGA 59.373 37.500 0.00 0.00 39.98 3.18
244 245 4.627467 TCCACGAAAACAAAACCAATGTTG 59.373 37.500 0.00 0.00 39.98 3.33
245 246 4.822026 TCCACGAAAACAAAACCAATGTT 58.178 34.783 0.00 0.00 42.56 2.71
246 247 4.457834 TCCACGAAAACAAAACCAATGT 57.542 36.364 0.00 0.00 0.00 2.71
247 248 5.786401 TTTCCACGAAAACAAAACCAATG 57.214 34.783 0.00 0.00 0.00 2.82
248 249 6.993786 AATTTCCACGAAAACAAAACCAAT 57.006 29.167 0.00 0.00 35.11 3.16
249 250 6.803154 AAATTTCCACGAAAACAAAACCAA 57.197 29.167 0.00 0.00 35.11 3.67
250 251 9.765795 ATATAAATTTCCACGAAAACAAAACCA 57.234 25.926 0.00 0.00 35.11 3.67
259 260 9.602568 TGCACTAGTATATAAATTTCCACGAAA 57.397 29.630 0.00 0.00 35.94 3.46
260 261 9.602568 TTGCACTAGTATATAAATTTCCACGAA 57.397 29.630 0.00 0.00 0.00 3.85
261 262 9.602568 TTTGCACTAGTATATAAATTTCCACGA 57.397 29.630 0.00 0.00 0.00 4.35
262 263 9.864034 CTTTGCACTAGTATATAAATTTCCACG 57.136 33.333 0.00 0.00 0.00 4.94
264 265 8.846211 GCCTTTGCACTAGTATATAAATTTCCA 58.154 33.333 0.00 0.00 37.47 3.53
265 266 8.846211 TGCCTTTGCACTAGTATATAAATTTCC 58.154 33.333 0.00 0.00 44.23 3.13
283 284 2.524569 TAAACTTGGCTTGCCTTTGC 57.475 45.000 13.18 0.00 38.26 3.68
284 285 7.489574 TTAAAATAAACTTGGCTTGCCTTTG 57.510 32.000 13.18 5.55 0.00 2.77
285 286 8.512966 TTTTAAAATAAACTTGGCTTGCCTTT 57.487 26.923 13.18 7.73 0.00 3.11
286 287 8.512966 TTTTTAAAATAAACTTGGCTTGCCTT 57.487 26.923 13.18 1.41 0.00 4.35
358 359 9.042450 TCCTGTTTGTATATACACCCTATATGG 57.958 37.037 15.20 9.45 35.64 2.74
361 362 8.873144 GGTTCCTGTTTGTATATACACCCTATA 58.127 37.037 15.20 0.00 35.64 1.31
362 363 7.348801 TGGTTCCTGTTTGTATATACACCCTAT 59.651 37.037 15.20 0.00 35.64 2.57
363 364 6.673097 TGGTTCCTGTTTGTATATACACCCTA 59.327 38.462 15.20 0.00 35.64 3.53
364 365 5.489637 TGGTTCCTGTTTGTATATACACCCT 59.510 40.000 15.20 0.00 35.64 4.34
365 366 5.747342 TGGTTCCTGTTTGTATATACACCC 58.253 41.667 15.20 9.14 35.64 4.61
366 367 7.148137 CCTTTGGTTCCTGTTTGTATATACACC 60.148 40.741 15.20 10.76 35.64 4.16
367 368 7.148137 CCCTTTGGTTCCTGTTTGTATATACAC 60.148 40.741 15.20 5.86 35.64 2.90
368 369 6.887545 CCCTTTGGTTCCTGTTTGTATATACA 59.112 38.462 11.62 11.62 0.00 2.29
369 370 6.888088 ACCCTTTGGTTCCTGTTTGTATATAC 59.112 38.462 5.89 5.89 44.75 1.47
370 371 7.034967 ACCCTTTGGTTCCTGTTTGTATATA 57.965 36.000 0.00 0.00 44.75 0.86
371 372 5.899278 ACCCTTTGGTTCCTGTTTGTATAT 58.101 37.500 0.00 0.00 44.75 0.86
372 373 5.327737 ACCCTTTGGTTCCTGTTTGTATA 57.672 39.130 0.00 0.00 44.75 1.47
373 374 4.193240 ACCCTTTGGTTCCTGTTTGTAT 57.807 40.909 0.00 0.00 44.75 2.29
374 375 3.673543 ACCCTTTGGTTCCTGTTTGTA 57.326 42.857 0.00 0.00 44.75 2.41
375 376 2.543037 ACCCTTTGGTTCCTGTTTGT 57.457 45.000 0.00 0.00 44.75 2.83
376 377 5.510690 GGAAATACCCTTTGGTTCCTGTTTG 60.511 44.000 0.00 0.00 44.75 2.93
377 378 4.591498 GGAAATACCCTTTGGTTCCTGTTT 59.409 41.667 0.00 0.00 44.75 2.83
378 379 4.157246 GGAAATACCCTTTGGTTCCTGTT 58.843 43.478 0.00 0.00 44.75 3.16
379 380 3.774734 GGAAATACCCTTTGGTTCCTGT 58.225 45.455 0.00 0.00 44.75 4.00
392 393 9.841295 TTAATGTGTCATTAGTAGGGAAATACC 57.159 33.333 3.11 0.00 38.08 2.73
397 398 9.832445 GAAGATTAATGTGTCATTAGTAGGGAA 57.168 33.333 0.00 0.00 0.00 3.97
398 399 8.988060 TGAAGATTAATGTGTCATTAGTAGGGA 58.012 33.333 0.00 0.00 0.00 4.20
399 400 9.265901 CTGAAGATTAATGTGTCATTAGTAGGG 57.734 37.037 0.00 0.00 0.00 3.53
406 407 9.471702 AGGAATTCTGAAGATTAATGTGTCATT 57.528 29.630 5.23 0.80 0.00 2.57
419 420 9.877178 GTTGTTCTTCTATAGGAATTCTGAAGA 57.123 33.333 5.23 12.73 38.34 2.87
420 421 9.658799 TGTTGTTCTTCTATAGGAATTCTGAAG 57.341 33.333 5.23 10.96 33.01 3.02
421 422 9.658799 CTGTTGTTCTTCTATAGGAATTCTGAA 57.341 33.333 5.23 0.00 33.01 3.02
422 423 8.260818 CCTGTTGTTCTTCTATAGGAATTCTGA 58.739 37.037 5.23 0.00 33.60 3.27
423 424 8.260818 TCCTGTTGTTCTTCTATAGGAATTCTG 58.739 37.037 5.23 0.00 36.61 3.02
424 425 8.380742 TCCTGTTGTTCTTCTATAGGAATTCT 57.619 34.615 5.23 0.00 36.61 2.40
425 426 7.713073 CCTCCTGTTGTTCTTCTATAGGAATTC 59.287 40.741 0.00 0.00 38.26 2.17
426 427 7.403231 TCCTCCTGTTGTTCTTCTATAGGAATT 59.597 37.037 0.00 0.00 38.26 2.17
427 428 6.903534 TCCTCCTGTTGTTCTTCTATAGGAAT 59.096 38.462 0.00 0.00 38.26 3.01
428 429 6.261435 TCCTCCTGTTGTTCTTCTATAGGAA 58.739 40.000 0.00 0.00 38.26 3.36
429 430 5.838955 TCCTCCTGTTGTTCTTCTATAGGA 58.161 41.667 0.00 0.00 37.01 2.94
430 431 6.515862 CGATCCTCCTGTTGTTCTTCTATAGG 60.516 46.154 0.00 0.00 33.22 2.57
431 432 6.263392 TCGATCCTCCTGTTGTTCTTCTATAG 59.737 42.308 0.00 0.00 0.00 1.31
432 433 6.039493 GTCGATCCTCCTGTTGTTCTTCTATA 59.961 42.308 0.00 0.00 0.00 1.31
433 434 4.956700 TCGATCCTCCTGTTGTTCTTCTAT 59.043 41.667 0.00 0.00 0.00 1.98
434 435 4.158025 GTCGATCCTCCTGTTGTTCTTCTA 59.842 45.833 0.00 0.00 0.00 2.10
435 436 3.056465 GTCGATCCTCCTGTTGTTCTTCT 60.056 47.826 0.00 0.00 0.00 2.85
436 437 3.056465 AGTCGATCCTCCTGTTGTTCTTC 60.056 47.826 0.00 0.00 0.00 2.87
437 438 2.900546 AGTCGATCCTCCTGTTGTTCTT 59.099 45.455 0.00 0.00 0.00 2.52
438 439 2.530701 AGTCGATCCTCCTGTTGTTCT 58.469 47.619 0.00 0.00 0.00 3.01
439 440 2.996621 CAAGTCGATCCTCCTGTTGTTC 59.003 50.000 0.00 0.00 0.00 3.18
440 441 2.368875 ACAAGTCGATCCTCCTGTTGTT 59.631 45.455 0.00 0.00 0.00 2.83
441 442 1.971357 ACAAGTCGATCCTCCTGTTGT 59.029 47.619 0.00 0.00 0.00 3.32
442 443 2.232452 AGACAAGTCGATCCTCCTGTTG 59.768 50.000 0.00 0.00 34.09 3.33
452 453 3.525537 CAAGGCATGTAGACAAGTCGAT 58.474 45.455 0.00 0.00 34.09 3.59
485 486 7.415206 GCTTGTTCTCTTTTGGTTGTTCTTCTA 60.415 37.037 0.00 0.00 0.00 2.10
487 488 5.516696 GCTTGTTCTCTTTTGGTTGTTCTTC 59.483 40.000 0.00 0.00 0.00 2.87
488 489 5.047377 TGCTTGTTCTCTTTTGGTTGTTCTT 60.047 36.000 0.00 0.00 0.00 2.52
490 491 4.743493 TGCTTGTTCTCTTTTGGTTGTTC 58.257 39.130 0.00 0.00 0.00 3.18
491 492 4.799564 TGCTTGTTCTCTTTTGGTTGTT 57.200 36.364 0.00 0.00 0.00 2.83
493 494 4.935702 TGATGCTTGTTCTCTTTTGGTTG 58.064 39.130 0.00 0.00 0.00 3.77
500 501 9.399797 TGACATAATAATGATGCTTGTTCTCTT 57.600 29.630 0.00 0.00 36.54 2.85
510 511 8.623903 TGTTCTCCTTTGACATAATAATGATGC 58.376 33.333 0.00 0.00 36.54 3.91
559 560 2.781681 TTCCCCCGCAAAAACAAAAA 57.218 40.000 0.00 0.00 0.00 1.94
560 561 2.781681 TTTCCCCCGCAAAAACAAAA 57.218 40.000 0.00 0.00 0.00 2.44
561 562 2.236395 TCTTTTCCCCCGCAAAAACAAA 59.764 40.909 0.00 0.00 0.00 2.83
562 563 1.831736 TCTTTTCCCCCGCAAAAACAA 59.168 42.857 0.00 0.00 0.00 2.83
563 564 1.137282 GTCTTTTCCCCCGCAAAAACA 59.863 47.619 0.00 0.00 0.00 2.83
564 565 1.860676 GTCTTTTCCCCCGCAAAAAC 58.139 50.000 0.00 0.00 0.00 2.43
565 566 0.386113 CGTCTTTTCCCCCGCAAAAA 59.614 50.000 0.00 0.00 0.00 1.94
566 567 0.465824 TCGTCTTTTCCCCCGCAAAA 60.466 50.000 0.00 0.00 0.00 2.44
567 568 1.148723 TCGTCTTTTCCCCCGCAAA 59.851 52.632 0.00 0.00 0.00 3.68
568 569 1.598685 GTCGTCTTTTCCCCCGCAA 60.599 57.895 0.00 0.00 0.00 4.85
569 570 2.031465 GTCGTCTTTTCCCCCGCA 59.969 61.111 0.00 0.00 0.00 5.69
570 571 2.031465 TGTCGTCTTTTCCCCCGC 59.969 61.111 0.00 0.00 0.00 6.13
571 572 1.670083 GGTGTCGTCTTTTCCCCCG 60.670 63.158 0.00 0.00 0.00 5.73
572 573 0.037734 ATGGTGTCGTCTTTTCCCCC 59.962 55.000 0.00 0.00 0.00 5.40
573 574 1.271163 TGATGGTGTCGTCTTTTCCCC 60.271 52.381 0.00 0.00 0.00 4.81
574 575 1.804748 GTGATGGTGTCGTCTTTTCCC 59.195 52.381 0.00 0.00 0.00 3.97
575 576 2.480419 CAGTGATGGTGTCGTCTTTTCC 59.520 50.000 0.00 0.00 0.00 3.13
576 577 3.131396 ACAGTGATGGTGTCGTCTTTTC 58.869 45.455 0.00 0.00 0.00 2.29
577 578 3.194005 ACAGTGATGGTGTCGTCTTTT 57.806 42.857 0.00 0.00 0.00 2.27
578 579 2.910688 ACAGTGATGGTGTCGTCTTT 57.089 45.000 0.00 0.00 0.00 2.52
579 580 2.029290 GGTACAGTGATGGTGTCGTCTT 60.029 50.000 0.00 0.00 0.00 3.01
580 581 1.544691 GGTACAGTGATGGTGTCGTCT 59.455 52.381 0.00 0.00 0.00 4.18
581 582 1.271379 TGGTACAGTGATGGTGTCGTC 59.729 52.381 0.00 0.00 0.00 4.20
582 583 1.334160 TGGTACAGTGATGGTGTCGT 58.666 50.000 0.00 0.00 0.00 4.34
583 584 2.448926 TTGGTACAGTGATGGTGTCG 57.551 50.000 0.00 0.00 42.39 4.35
584 585 5.705609 ATTTTTGGTACAGTGATGGTGTC 57.294 39.130 0.00 0.00 42.39 3.67
585 586 6.539173 TCTATTTTTGGTACAGTGATGGTGT 58.461 36.000 0.00 0.00 42.39 4.16
586 587 7.447374 TTCTATTTTTGGTACAGTGATGGTG 57.553 36.000 0.00 0.00 42.39 4.17
587 588 8.650143 ATTTCTATTTTTGGTACAGTGATGGT 57.350 30.769 0.00 0.00 42.39 3.55
588 589 8.739039 TGATTTCTATTTTTGGTACAGTGATGG 58.261 33.333 0.00 0.00 42.39 3.51
589 590 9.778993 CTGATTTCTATTTTTGGTACAGTGATG 57.221 33.333 0.00 0.00 42.39 3.07
590 591 8.960591 CCTGATTTCTATTTTTGGTACAGTGAT 58.039 33.333 0.00 0.00 42.39 3.06
591 592 8.160765 TCCTGATTTCTATTTTTGGTACAGTGA 58.839 33.333 0.00 0.00 42.39 3.41
592 593 8.335532 TCCTGATTTCTATTTTTGGTACAGTG 57.664 34.615 0.00 0.00 42.39 3.66
593 594 8.960591 CATCCTGATTTCTATTTTTGGTACAGT 58.039 33.333 0.00 0.00 42.39 3.55
594 595 9.177608 TCATCCTGATTTCTATTTTTGGTACAG 57.822 33.333 0.00 0.00 42.39 2.74
595 596 9.699410 ATCATCCTGATTTCTATTTTTGGTACA 57.301 29.630 0.00 0.00 32.13 2.90
597 598 9.056005 CGATCATCCTGATTTCTATTTTTGGTA 57.944 33.333 0.00 0.00 37.20 3.25
598 599 7.469181 GCGATCATCCTGATTTCTATTTTTGGT 60.469 37.037 0.00 0.00 37.20 3.67
599 600 6.860023 GCGATCATCCTGATTTCTATTTTTGG 59.140 38.462 0.00 0.00 37.20 3.28
600 601 6.576313 CGCGATCATCCTGATTTCTATTTTTG 59.424 38.462 0.00 0.00 37.20 2.44
601 602 6.662616 CGCGATCATCCTGATTTCTATTTTT 58.337 36.000 0.00 0.00 37.20 1.94
602 603 5.334414 GCGCGATCATCCTGATTTCTATTTT 60.334 40.000 12.10 0.00 37.20 1.82
603 604 4.153117 GCGCGATCATCCTGATTTCTATTT 59.847 41.667 12.10 0.00 37.20 1.40
604 605 3.681897 GCGCGATCATCCTGATTTCTATT 59.318 43.478 12.10 0.00 37.20 1.73
605 606 3.056250 AGCGCGATCATCCTGATTTCTAT 60.056 43.478 12.10 0.00 37.20 1.98
606 607 2.297315 AGCGCGATCATCCTGATTTCTA 59.703 45.455 12.10 0.00 37.20 2.10
607 608 1.069823 AGCGCGATCATCCTGATTTCT 59.930 47.619 12.10 0.00 37.20 2.52
608 609 1.506493 AGCGCGATCATCCTGATTTC 58.494 50.000 12.10 0.00 37.20 2.17
609 610 2.802816 GTTAGCGCGATCATCCTGATTT 59.197 45.455 12.10 0.00 37.20 2.17
610 611 2.036475 AGTTAGCGCGATCATCCTGATT 59.964 45.455 12.10 0.00 37.20 2.57
611 612 1.615883 AGTTAGCGCGATCATCCTGAT 59.384 47.619 12.10 0.00 40.34 2.90
612 613 1.032794 AGTTAGCGCGATCATCCTGA 58.967 50.000 12.10 0.00 0.00 3.86
613 614 1.858091 AAGTTAGCGCGATCATCCTG 58.142 50.000 12.10 0.00 0.00 3.86
614 615 2.101582 AGAAAGTTAGCGCGATCATCCT 59.898 45.455 12.10 0.00 0.00 3.24
615 616 2.474816 AGAAAGTTAGCGCGATCATCC 58.525 47.619 12.10 0.00 0.00 3.51
616 617 3.120451 GCTAGAAAGTTAGCGCGATCATC 59.880 47.826 12.10 0.00 36.97 2.92
627 628 5.677319 ATGGTACTGCTGCTAGAAAGTTA 57.323 39.130 0.00 0.00 0.00 2.24
630 631 4.764172 AGAATGGTACTGCTGCTAGAAAG 58.236 43.478 0.00 0.00 0.00 2.62
669 673 8.035394 GTCTTTGTATCTTTCACCTGATCAGTA 58.965 37.037 21.11 3.88 0.00 2.74
671 675 6.875726 TGTCTTTGTATCTTTCACCTGATCAG 59.124 38.462 16.24 16.24 0.00 2.90
673 677 7.672983 TTGTCTTTGTATCTTTCACCTGATC 57.327 36.000 0.00 0.00 0.00 2.92
773 1702 7.064490 GGCAATCTCTTTTTGTTTCTTTGTCAA 59.936 33.333 0.00 0.00 0.00 3.18
774 1703 6.534793 GGCAATCTCTTTTTGTTTCTTTGTCA 59.465 34.615 0.00 0.00 0.00 3.58
775 1704 6.018751 GGGCAATCTCTTTTTGTTTCTTTGTC 60.019 38.462 0.00 0.00 0.00 3.18
776 1705 5.817296 GGGCAATCTCTTTTTGTTTCTTTGT 59.183 36.000 0.00 0.00 0.00 2.83
777 1706 5.050837 CGGGCAATCTCTTTTTGTTTCTTTG 60.051 40.000 0.00 0.00 0.00 2.77
781 1710 2.731451 GCGGGCAATCTCTTTTTGTTTC 59.269 45.455 0.00 0.00 0.00 2.78
783 1712 1.963515 AGCGGGCAATCTCTTTTTGTT 59.036 42.857 0.00 0.00 0.00 2.83
785 1714 2.030007 TGAAGCGGGCAATCTCTTTTTG 60.030 45.455 0.00 0.00 0.00 2.44
789 1718 1.028868 GCTGAAGCGGGCAATCTCTT 61.029 55.000 0.00 0.00 0.00 2.85
976 1984 4.295199 GGGCGGTTTTGGGAGGGT 62.295 66.667 0.00 0.00 0.00 4.34
2118 3126 4.156739 TCCTCATCATCGTAATCATCCTCG 59.843 45.833 0.00 0.00 0.00 4.63
2127 3135 5.140454 TCTTCATCCTCCTCATCATCGTAA 58.860 41.667 0.00 0.00 0.00 3.18
2214 3222 2.370189 AGTTTCTCCCCTGTTCTCTGTG 59.630 50.000 0.00 0.00 0.00 3.66
2271 3279 2.238144 ACAAGACCAGCTATGATGCAGT 59.762 45.455 0.00 0.00 34.99 4.40
2334 3342 4.060038 ACATTATGTTGCTAGGTCTCCG 57.940 45.455 0.00 0.00 0.00 4.63
2336 3344 7.710907 TGATTGTACATTATGTTGCTAGGTCTC 59.289 37.037 2.23 0.00 0.00 3.36
2400 3408 9.738832 TCACAACCTAGTTAAACAAAAATAAGC 57.261 29.630 0.00 0.00 0.00 3.09
2512 3520 7.659390 AGCTATCATGCTTTCAGTAATCTAACC 59.341 37.037 0.00 0.00 40.93 2.85
2538 3546 1.016627 GCATGCGAGAGTGGCAATAA 58.983 50.000 0.00 0.00 44.66 1.40
2547 3555 5.736358 GTCTTTTTAATTGAGCATGCGAGAG 59.264 40.000 13.01 0.61 0.00 3.20
2552 3560 5.061808 CAGCAGTCTTTTTAATTGAGCATGC 59.938 40.000 10.51 10.51 0.00 4.06
2557 3565 7.587629 TGTGATCAGCAGTCTTTTTAATTGAG 58.412 34.615 0.00 0.00 0.00 3.02
2563 3571 9.897744 CTTTAATTGTGATCAGCAGTCTTTTTA 57.102 29.630 0.00 0.00 0.00 1.52
2617 3626 6.899393 TTGCTATGGACAGAACAAATTCTT 57.101 33.333 0.00 0.00 42.91 2.52
2660 3671 9.793259 AGAATTCACTGAGAAACAACCTATAAA 57.207 29.630 8.44 0.00 40.22 1.40
2661 3672 9.793259 AAGAATTCACTGAGAAACAACCTATAA 57.207 29.630 8.44 0.00 40.22 0.98
2671 3682 9.567776 TGGTACATAAAAGAATTCACTGAGAAA 57.432 29.630 8.44 0.00 40.22 2.52
2739 3750 5.703876 CAAGCCTGTTGACTTAAATCCTTC 58.296 41.667 0.00 0.00 0.00 3.46
2750 3761 4.809070 AGGAGCAAGCCTGTTGAC 57.191 55.556 0.00 0.00 36.76 3.18
2821 3832 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
2822 3833 4.386711 GACTTATATTTGGGAACGGAGGG 58.613 47.826 0.00 0.00 0.00 4.30
2823 3834 4.056050 CGACTTATATTTGGGAACGGAGG 58.944 47.826 0.00 0.00 0.00 4.30
2824 3835 4.690122 ACGACTTATATTTGGGAACGGAG 58.310 43.478 0.00 0.00 0.00 4.63
2825 3836 4.741321 ACGACTTATATTTGGGAACGGA 57.259 40.909 0.00 0.00 0.00 4.69
2826 3837 5.806366 AAACGACTTATATTTGGGAACGG 57.194 39.130 0.00 0.00 0.00 4.44
2827 3838 8.188531 TCTAAAACGACTTATATTTGGGAACG 57.811 34.615 0.00 0.00 0.00 3.95
2828 3839 9.374838 TCTCTAAAACGACTTATATTTGGGAAC 57.625 33.333 0.00 0.00 0.00 3.62
2839 3850 8.770828 CCTTGTTGAAATCTCTAAAACGACTTA 58.229 33.333 0.00 0.00 0.00 2.24
2840 3851 7.255139 CCCTTGTTGAAATCTCTAAAACGACTT 60.255 37.037 0.00 0.00 0.00 3.01
2841 3852 6.204882 CCCTTGTTGAAATCTCTAAAACGACT 59.795 38.462 0.00 0.00 0.00 4.18
2842 3853 6.371389 CCCTTGTTGAAATCTCTAAAACGAC 58.629 40.000 0.00 0.00 0.00 4.34
2843 3854 5.472137 CCCCTTGTTGAAATCTCTAAAACGA 59.528 40.000 0.00 0.00 0.00 3.85
2844 3855 5.472137 TCCCCTTGTTGAAATCTCTAAAACG 59.528 40.000 0.00 0.00 0.00 3.60
2845 3856 6.490381 AGTCCCCTTGTTGAAATCTCTAAAAC 59.510 38.462 0.00 0.00 0.00 2.43
2846 3857 6.610830 AGTCCCCTTGTTGAAATCTCTAAAA 58.389 36.000 0.00 0.00 0.00 1.52
2847 3858 6.200878 AGTCCCCTTGTTGAAATCTCTAAA 57.799 37.500 0.00 0.00 0.00 1.85
2848 3859 5.843019 AGTCCCCTTGTTGAAATCTCTAA 57.157 39.130 0.00 0.00 0.00 2.10
2849 3860 5.783360 TGTAGTCCCCTTGTTGAAATCTCTA 59.217 40.000 0.00 0.00 0.00 2.43
2850 3861 4.597507 TGTAGTCCCCTTGTTGAAATCTCT 59.402 41.667 0.00 0.00 0.00 3.10
2851 3862 4.906618 TGTAGTCCCCTTGTTGAAATCTC 58.093 43.478 0.00 0.00 0.00 2.75
2852 3863 4.993705 TGTAGTCCCCTTGTTGAAATCT 57.006 40.909 0.00 0.00 0.00 2.40
2853 3864 5.293569 CGTATGTAGTCCCCTTGTTGAAATC 59.706 44.000 0.00 0.00 0.00 2.17
2854 3865 5.183228 CGTATGTAGTCCCCTTGTTGAAAT 58.817 41.667 0.00 0.00 0.00 2.17
2855 3866 4.563993 CCGTATGTAGTCCCCTTGTTGAAA 60.564 45.833 0.00 0.00 0.00 2.69
2856 3867 3.055675 CCGTATGTAGTCCCCTTGTTGAA 60.056 47.826 0.00 0.00 0.00 2.69
2857 3868 2.498481 CCGTATGTAGTCCCCTTGTTGA 59.502 50.000 0.00 0.00 0.00 3.18
2858 3869 2.498481 TCCGTATGTAGTCCCCTTGTTG 59.502 50.000 0.00 0.00 0.00 3.33
2859 3870 2.764572 CTCCGTATGTAGTCCCCTTGTT 59.235 50.000 0.00 0.00 0.00 2.83
2860 3871 2.385803 CTCCGTATGTAGTCCCCTTGT 58.614 52.381 0.00 0.00 0.00 3.16
2861 3872 1.068741 GCTCCGTATGTAGTCCCCTTG 59.931 57.143 0.00 0.00 0.00 3.61
2862 3873 1.342674 TGCTCCGTATGTAGTCCCCTT 60.343 52.381 0.00 0.00 0.00 3.95
2863 3874 0.260816 TGCTCCGTATGTAGTCCCCT 59.739 55.000 0.00 0.00 0.00 4.79
2864 3875 1.117150 TTGCTCCGTATGTAGTCCCC 58.883 55.000 0.00 0.00 0.00 4.81
2865 3876 2.973694 TTTGCTCCGTATGTAGTCCC 57.026 50.000 0.00 0.00 0.00 4.46
2866 3877 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2867 3878 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2868 3879 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2869 3880 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2870 3881 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2871 3882 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2872 3883 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2873 3884 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2874 3885 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2875 3886 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2876 3887 4.259970 CGTAGATTCACTCATTTTGCTCCG 60.260 45.833 0.00 0.00 0.00 4.63
2877 3888 4.494855 GCGTAGATTCACTCATTTTGCTCC 60.495 45.833 0.00 0.00 0.00 4.70
2878 3889 4.331168 AGCGTAGATTCACTCATTTTGCTC 59.669 41.667 0.00 0.00 0.00 4.26
2879 3890 4.256920 AGCGTAGATTCACTCATTTTGCT 58.743 39.130 0.00 0.00 0.00 3.91
2880 3891 4.331168 AGAGCGTAGATTCACTCATTTTGC 59.669 41.667 0.00 0.00 0.00 3.68
2881 3892 7.525688 TTAGAGCGTAGATTCACTCATTTTG 57.474 36.000 0.00 0.00 0.00 2.44
2882 3893 7.819900 ACTTTAGAGCGTAGATTCACTCATTTT 59.180 33.333 0.00 0.00 0.00 1.82
2883 3894 7.324178 ACTTTAGAGCGTAGATTCACTCATTT 58.676 34.615 0.00 0.00 0.00 2.32
2884 3895 6.868622 ACTTTAGAGCGTAGATTCACTCATT 58.131 36.000 0.00 0.00 0.00 2.57
2885 3896 6.458232 ACTTTAGAGCGTAGATTCACTCAT 57.542 37.500 0.00 0.00 0.00 2.90
2886 3897 5.899120 ACTTTAGAGCGTAGATTCACTCA 57.101 39.130 0.00 0.00 0.00 3.41
2887 3898 7.419204 ACATACTTTAGAGCGTAGATTCACTC 58.581 38.462 0.00 0.00 0.00 3.51
2888 3899 7.283580 AGACATACTTTAGAGCGTAGATTCACT 59.716 37.037 0.00 0.00 0.00 3.41
2889 3900 7.419204 AGACATACTTTAGAGCGTAGATTCAC 58.581 38.462 0.00 0.00 0.00 3.18
2890 3901 7.569639 AGACATACTTTAGAGCGTAGATTCA 57.430 36.000 0.00 0.00 0.00 2.57
2894 3905 8.666573 GCATATAGACATACTTTAGAGCGTAGA 58.333 37.037 0.00 0.00 0.00 2.59
2895 3906 8.451748 TGCATATAGACATACTTTAGAGCGTAG 58.548 37.037 0.00 0.00 0.00 3.51
2896 3907 8.331730 TGCATATAGACATACTTTAGAGCGTA 57.668 34.615 0.00 0.00 0.00 4.42
2897 3908 7.215719 TGCATATAGACATACTTTAGAGCGT 57.784 36.000 0.00 0.00 0.00 5.07
2898 3909 7.433719 GGATGCATATAGACATACTTTAGAGCG 59.566 40.741 0.00 0.00 0.00 5.03
2899 3910 7.433719 CGGATGCATATAGACATACTTTAGAGC 59.566 40.741 0.00 0.00 0.00 4.09
2900 3911 8.462811 ACGGATGCATATAGACATACTTTAGAG 58.537 37.037 0.00 0.00 0.00 2.43
2901 3912 8.349568 ACGGATGCATATAGACATACTTTAGA 57.650 34.615 0.00 0.00 0.00 2.10
2907 3918 9.967346 ACAATATACGGATGCATATAGACATAC 57.033 33.333 0.00 0.00 0.00 2.39
2910 3921 9.185680 ACTACAATATACGGATGCATATAGACA 57.814 33.333 0.00 0.00 0.00 3.41
2911 3922 9.666626 GACTACAATATACGGATGCATATAGAC 57.333 37.037 0.00 0.00 0.00 2.59
2912 3923 8.847196 GGACTACAATATACGGATGCATATAGA 58.153 37.037 0.00 0.00 0.00 1.98
2913 3924 8.630037 TGGACTACAATATACGGATGCATATAG 58.370 37.037 0.00 0.00 0.00 1.31
2914 3925 8.528044 TGGACTACAATATACGGATGCATATA 57.472 34.615 0.00 0.00 0.00 0.86
2915 3926 7.418337 TGGACTACAATATACGGATGCATAT 57.582 36.000 0.00 0.00 0.00 1.78
2916 3927 6.844097 TGGACTACAATATACGGATGCATA 57.156 37.500 0.00 0.00 0.00 3.14
2917 3928 5.738619 TGGACTACAATATACGGATGCAT 57.261 39.130 0.00 0.00 0.00 3.96
2918 3929 5.738619 ATGGACTACAATATACGGATGCA 57.261 39.130 0.00 0.00 0.00 3.96
2919 3930 6.649141 TCAAATGGACTACAATATACGGATGC 59.351 38.462 0.00 0.00 0.00 3.91
2920 3931 8.601845 TTCAAATGGACTACAATATACGGATG 57.398 34.615 0.00 0.00 0.00 3.51
2921 3932 9.052759 GTTTCAAATGGACTACAATATACGGAT 57.947 33.333 0.00 0.00 0.00 4.18
2922 3933 7.496591 GGTTTCAAATGGACTACAATATACGGA 59.503 37.037 0.00 0.00 0.00 4.69
2923 3934 7.497909 AGGTTTCAAATGGACTACAATATACGG 59.502 37.037 0.00 0.00 0.00 4.02
2924 3935 8.433421 AGGTTTCAAATGGACTACAATATACG 57.567 34.615 0.00 0.00 0.00 3.06
2925 3936 9.614792 AGAGGTTTCAAATGGACTACAATATAC 57.385 33.333 0.00 0.00 0.00 1.47
2929 3940 8.934023 TTTAGAGGTTTCAAATGGACTACAAT 57.066 30.769 0.00 0.00 0.00 2.71
2930 3941 8.754991 TTTTAGAGGTTTCAAATGGACTACAA 57.245 30.769 0.00 0.00 0.00 2.41
2931 3942 8.754991 TTTTTAGAGGTTTCAAATGGACTACA 57.245 30.769 0.00 0.00 0.00 2.74
2932 3943 9.063615 TCTTTTTAGAGGTTTCAAATGGACTAC 57.936 33.333 0.00 0.00 0.00 2.73
2933 3944 9.063615 GTCTTTTTAGAGGTTTCAAATGGACTA 57.936 33.333 0.00 0.00 0.00 2.59
2934 3945 7.780271 AGTCTTTTTAGAGGTTTCAAATGGACT 59.220 33.333 0.00 0.00 0.00 3.85
2935 3946 7.941919 AGTCTTTTTAGAGGTTTCAAATGGAC 58.058 34.615 0.00 0.00 0.00 4.02
2936 3947 8.533569 AAGTCTTTTTAGAGGTTTCAAATGGA 57.466 30.769 0.00 0.00 0.00 3.41
2953 3964 9.392259 CCCTCCGTTTCTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
2954 3965 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
2955 3966 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
2956 3967 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
2957 3968 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
2958 3969 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
2959 3970 8.636213 TGTACTCCCTCCGTTTCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
2960 3971 8.537728 TGTACTCCCTCCGTTTCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2961 3972 8.582437 CATGTACTCCCTCCGTTTCTAAATATA 58.418 37.037 0.00 0.00 0.00 0.86
2962 3973 7.289317 TCATGTACTCCCTCCGTTTCTAAATAT 59.711 37.037 0.00 0.00 0.00 1.28
2963 3974 6.608405 TCATGTACTCCCTCCGTTTCTAAATA 59.392 38.462 0.00 0.00 0.00 1.40
2964 3975 5.424252 TCATGTACTCCCTCCGTTTCTAAAT 59.576 40.000 0.00 0.00 0.00 1.40
2965 3976 4.773674 TCATGTACTCCCTCCGTTTCTAAA 59.226 41.667 0.00 0.00 0.00 1.85
2966 3977 4.159135 GTCATGTACTCCCTCCGTTTCTAA 59.841 45.833 0.00 0.00 0.00 2.10
2967 3978 3.698040 GTCATGTACTCCCTCCGTTTCTA 59.302 47.826 0.00 0.00 0.00 2.10
2968 3979 2.496470 GTCATGTACTCCCTCCGTTTCT 59.504 50.000 0.00 0.00 0.00 2.52
2969 3980 2.232941 TGTCATGTACTCCCTCCGTTTC 59.767 50.000 0.00 0.00 0.00 2.78
2970 3981 2.253610 TGTCATGTACTCCCTCCGTTT 58.746 47.619 0.00 0.00 0.00 3.60
2971 3982 1.933021 TGTCATGTACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
2972 3983 1.825474 CTTGTCATGTACTCCCTCCGT 59.175 52.381 0.00 0.00 0.00 4.69
2973 3984 1.137086 CCTTGTCATGTACTCCCTCCG 59.863 57.143 0.00 0.00 0.00 4.63
2974 3985 2.188817 ACCTTGTCATGTACTCCCTCC 58.811 52.381 0.00 0.00 0.00 4.30
2975 3986 3.983044 AACCTTGTCATGTACTCCCTC 57.017 47.619 0.00 0.00 0.00 4.30
2976 3987 5.726793 AGAATAACCTTGTCATGTACTCCCT 59.273 40.000 0.00 0.00 0.00 4.20
2977 3988 5.990668 AGAATAACCTTGTCATGTACTCCC 58.009 41.667 0.00 0.00 0.00 4.30
2978 3989 6.640518 TGAGAATAACCTTGTCATGTACTCC 58.359 40.000 0.00 0.00 0.00 3.85
2979 3990 8.607459 CAATGAGAATAACCTTGTCATGTACTC 58.393 37.037 0.00 0.00 0.00 2.59
2980 3991 8.321353 TCAATGAGAATAACCTTGTCATGTACT 58.679 33.333 0.00 0.00 0.00 2.73
2981 3992 8.492673 TCAATGAGAATAACCTTGTCATGTAC 57.507 34.615 0.00 0.00 0.00 2.90
2983 3994 9.857656 ATATCAATGAGAATAACCTTGTCATGT 57.142 29.630 0.00 0.00 0.00 3.21
3022 4033 7.042335 CGAGTTTTTCCTTGGACTAGATACAT 58.958 38.462 0.00 0.00 0.00 2.29
3031 4042 4.083271 CCTGATTCGAGTTTTTCCTTGGAC 60.083 45.833 0.00 0.00 0.00 4.02
3034 4045 3.253188 TGCCTGATTCGAGTTTTTCCTTG 59.747 43.478 0.00 0.00 0.00 3.61
3106 4139 6.973229 AATGCAGCAATTCTTTTAACATCC 57.027 33.333 0.00 0.00 0.00 3.51
3110 4143 8.298030 ACAGTTAATGCAGCAATTCTTTTAAC 57.702 30.769 15.04 15.04 0.00 2.01
3143 4176 4.890581 ACATTACCCTGTGTTTGCAGTTTA 59.109 37.500 0.00 0.00 34.84 2.01
3157 4190 4.765339 GGTTAACTCTGCAAACATTACCCT 59.235 41.667 5.42 0.00 0.00 4.34
3187 4220 7.162761 TCTCACGTATCTCCAAATAACCAAAA 58.837 34.615 0.00 0.00 0.00 2.44
3206 4239 6.943981 TGTCAACAGAAAAAGTAATCTCACG 58.056 36.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.