Multiple sequence alignment - TraesCS5D01G378400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G378400 chr5D 100.000 3834 0 0 1 3834 449989773 449993606 0.000000e+00 7081.0
1 TraesCS5D01G378400 chr5A 86.222 3404 245 115 536 3829 569282709 569285998 0.000000e+00 3482.0
2 TraesCS5D01G378400 chr5B 90.589 2614 151 50 1266 3829 549970343 549972911 0.000000e+00 3376.0
3 TraesCS5D01G378400 chr5B 82.005 439 53 16 60 489 670540130 670539709 2.190000e-92 350.0
4 TraesCS5D01G378400 chr5B 86.282 277 25 6 933 1204 549969955 549970223 4.850000e-74 289.0
5 TraesCS5D01G378400 chr5B 78.607 201 22 12 528 719 549969757 549969945 3.130000e-21 113.0
6 TraesCS5D01G378400 chr2D 91.379 290 7 4 2549 2829 543054163 543053883 7.770000e-102 381.0
7 TraesCS5D01G378400 chr2D 80.690 435 68 8 60 488 625329988 625330412 1.330000e-84 324.0
8 TraesCS5D01G378400 chr2D 96.875 32 0 1 21 52 501684815 501684785 7.000000e-03 52.8
9 TraesCS5D01G378400 chr3D 82.183 449 56 10 61 486 550250180 550249733 7.830000e-97 364.0
10 TraesCS5D01G378400 chr3D 100.000 28 0 0 21 48 177660924 177660951 7.000000e-03 52.8
11 TraesCS5D01G378400 chr3B 81.733 427 58 7 79 488 508259942 508260365 4.740000e-89 339.0
12 TraesCS5D01G378400 chr4D 80.171 469 60 21 49 490 496382216 496382678 1.720000e-83 320.0
13 TraesCS5D01G378400 chr4D 100.000 31 0 0 477 507 6253280 6253310 1.490000e-04 58.4
14 TraesCS5D01G378400 chr4D 100.000 30 0 0 478 507 472942998 472942969 5.350000e-04 56.5
15 TraesCS5D01G378400 chr4D 100.000 28 0 0 21 48 496381853 496381880 7.000000e-03 52.8
16 TraesCS5D01G378400 chr1D 81.841 391 59 6 60 444 345408843 345408459 6.180000e-83 318.0
17 TraesCS5D01G378400 chr1D 77.609 460 58 29 40 474 365804054 365803615 1.780000e-58 237.0
18 TraesCS5D01G378400 chr7B 80.952 420 63 10 60 471 402851406 402850996 2.220000e-82 316.0
19 TraesCS5D01G378400 chr7B 80.500 400 71 5 79 474 119581504 119581108 2.240000e-77 300.0
20 TraesCS5D01G378400 chr7B 81.414 382 48 10 124 482 693170779 693171160 1.350000e-74 291.0
21 TraesCS5D01G378400 chr7B 96.875 32 0 1 21 52 588294606 588294576 7.000000e-03 52.8
22 TraesCS5D01G378400 chr4B 80.444 450 58 17 57 480 636468419 636468864 2.220000e-82 316.0
23 TraesCS5D01G378400 chr4B 100.000 28 0 0 480 507 595291660 595291633 7.000000e-03 52.8
24 TraesCS5D01G378400 chr4A 80.720 389 55 12 60 434 617479511 617479129 6.270000e-73 285.0
25 TraesCS5D01G378400 chr2A 80.253 395 62 12 80 471 754397962 754397581 2.250000e-72 283.0
26 TraesCS5D01G378400 chr2A 82.215 298 48 4 190 483 612414644 612414348 6.360000e-63 252.0
27 TraesCS5D01G378400 chr6B 83.451 284 43 4 208 489 685707274 685706993 1.060000e-65 261.0
28 TraesCS5D01G378400 chr2B 77.528 445 76 8 105 530 23923138 23922699 2.960000e-61 246.0
29 TraesCS5D01G378400 chr6D 81.625 283 25 15 33 292 457669648 457669926 3.880000e-50 209.0
30 TraesCS5D01G378400 chr7D 100.000 29 0 0 21 49 436494633 436494661 2.000000e-03 54.7
31 TraesCS5D01G378400 chr7A 96.875 32 0 1 21 52 84305665 84305695 7.000000e-03 52.8
32 TraesCS5D01G378400 chr3A 96.875 32 0 1 21 52 628310116 628310086 7.000000e-03 52.8
33 TraesCS5D01G378400 chr1B 96.875 32 0 1 21 52 161987758 161987728 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G378400 chr5D 449989773 449993606 3833 False 7081.000000 7081 100.000000 1 3834 1 chr5D.!!$F1 3833
1 TraesCS5D01G378400 chr5A 569282709 569285998 3289 False 3482.000000 3482 86.222000 536 3829 1 chr5A.!!$F1 3293
2 TraesCS5D01G378400 chr5B 549969757 549972911 3154 False 1259.333333 3376 85.159333 528 3829 3 chr5B.!!$F1 3301


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 993 0.036952 CTGCCTTCTCTCGCCAAGAA 60.037 55.0 0.0 0.0 32.23 2.52 F
2241 2404 0.105453 GGACTCTCCAGGCCCTCATA 60.105 60.0 0.0 0.0 43.28 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2632 2816 0.032615 ACTGGCTCGGGATCTTCTCT 60.033 55.0 0.00 0.0 0.00 3.10 R
3227 3432 0.526662 GACTCACGAGGGTGTTCGAT 59.473 55.0 2.12 0.0 44.68 3.59 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.504132 GCCACACGATCTCACCTC 57.496 61.111 0.00 0.00 0.00 3.85
23 24 1.153549 GCCACACGATCTCACCTCC 60.154 63.158 0.00 0.00 0.00 4.30
24 25 1.139734 CCACACGATCTCACCTCCG 59.860 63.158 0.00 0.00 0.00 4.63
25 26 1.139734 CACACGATCTCACCTCCGG 59.860 63.158 0.00 0.00 0.00 5.14
26 27 2.105128 CACGATCTCACCTCCGGC 59.895 66.667 0.00 0.00 0.00 6.13
27 28 3.148279 ACGATCTCACCTCCGGCC 61.148 66.667 0.00 0.00 0.00 6.13
28 29 2.835431 CGATCTCACCTCCGGCCT 60.835 66.667 0.00 0.00 0.00 5.19
29 30 2.427245 CGATCTCACCTCCGGCCTT 61.427 63.158 0.00 0.00 0.00 4.35
30 31 1.443828 GATCTCACCTCCGGCCTTC 59.556 63.158 0.00 0.00 0.00 3.46
31 32 1.002274 ATCTCACCTCCGGCCTTCT 59.998 57.895 0.00 0.00 0.00 2.85
32 33 1.045911 ATCTCACCTCCGGCCTTCTC 61.046 60.000 0.00 0.00 0.00 2.87
33 34 2.683933 TCACCTCCGGCCTTCTCC 60.684 66.667 0.00 0.00 0.00 3.71
78 79 4.821589 CGGCCGCAGAGGAGGAAC 62.822 72.222 14.67 0.00 45.00 3.62
79 80 4.475135 GGCCGCAGAGGAGGAACC 62.475 72.222 0.00 0.00 45.00 3.62
80 81 4.821589 GCCGCAGAGGAGGAACCG 62.822 72.222 0.00 0.00 45.00 4.44
81 82 4.821589 CCGCAGAGGAGGAACCGC 62.822 72.222 0.00 0.00 45.00 5.68
84 85 4.821589 CAGAGGAGGAACCGCGCC 62.822 72.222 0.00 0.00 43.25 6.53
89 90 4.778143 GAGGAACCGCGCCCACAT 62.778 66.667 0.00 0.00 0.00 3.21
90 91 4.344865 AGGAACCGCGCCCACATT 62.345 61.111 0.00 0.00 0.00 2.71
91 92 4.114997 GGAACCGCGCCCACATTG 62.115 66.667 0.00 0.00 0.00 2.82
92 93 3.361977 GAACCGCGCCCACATTGT 61.362 61.111 0.00 0.00 0.00 2.71
93 94 3.609214 GAACCGCGCCCACATTGTG 62.609 63.158 9.92 9.92 0.00 3.33
94 95 4.634703 ACCGCGCCCACATTGTGA 62.635 61.111 18.33 0.00 35.23 3.58
95 96 3.361158 CCGCGCCCACATTGTGAA 61.361 61.111 18.33 0.00 35.23 3.18
96 97 2.176546 CGCGCCCACATTGTGAAG 59.823 61.111 18.33 9.97 35.23 3.02
97 98 2.324330 CGCGCCCACATTGTGAAGA 61.324 57.895 18.33 0.00 35.23 2.87
98 99 1.851021 CGCGCCCACATTGTGAAGAA 61.851 55.000 18.33 0.00 35.23 2.52
99 100 0.109597 GCGCCCACATTGTGAAGAAG 60.110 55.000 18.33 7.96 35.23 2.85
100 101 1.238439 CGCCCACATTGTGAAGAAGT 58.762 50.000 18.33 0.00 35.23 3.01
101 102 1.069022 CGCCCACATTGTGAAGAAGTG 60.069 52.381 18.33 4.55 35.23 3.16
103 104 1.270550 CCCACATTGTGAAGAAGTGGC 59.729 52.381 18.33 0.00 46.39 5.01
104 105 1.955778 CCACATTGTGAAGAAGTGGCA 59.044 47.619 18.33 0.00 42.68 4.92
105 106 2.030540 CCACATTGTGAAGAAGTGGCAG 60.031 50.000 18.33 0.00 42.68 4.85
106 107 1.610522 ACATTGTGAAGAAGTGGCAGC 59.389 47.619 0.00 0.00 0.00 5.25
107 108 0.877071 ATTGTGAAGAAGTGGCAGCG 59.123 50.000 0.00 0.00 0.00 5.18
108 109 1.165907 TTGTGAAGAAGTGGCAGCGG 61.166 55.000 0.00 0.00 0.00 5.52
109 110 1.301716 GTGAAGAAGTGGCAGCGGA 60.302 57.895 0.00 0.00 0.00 5.54
110 111 1.004560 TGAAGAAGTGGCAGCGGAG 60.005 57.895 0.00 0.00 0.00 4.63
111 112 1.743252 GAAGAAGTGGCAGCGGAGG 60.743 63.158 0.00 0.00 0.00 4.30
112 113 2.172483 GAAGAAGTGGCAGCGGAGGA 62.172 60.000 0.00 0.00 0.00 3.71
113 114 1.768684 AAGAAGTGGCAGCGGAGGAA 61.769 55.000 0.00 0.00 0.00 3.36
114 115 1.743252 GAAGTGGCAGCGGAGGAAG 60.743 63.158 0.00 0.00 0.00 3.46
115 116 2.172483 GAAGTGGCAGCGGAGGAAGA 62.172 60.000 0.00 0.00 0.00 2.87
116 117 2.435059 GTGGCAGCGGAGGAAGAC 60.435 66.667 0.00 0.00 0.00 3.01
117 118 4.069232 TGGCAGCGGAGGAAGACG 62.069 66.667 0.00 0.00 0.00 4.18
147 148 3.428797 CGAGAGCGGAATCGGGTA 58.571 61.111 0.00 0.00 35.33 3.69
148 149 1.283181 CGAGAGCGGAATCGGGTAG 59.717 63.158 0.00 0.00 35.33 3.18
149 150 1.445716 CGAGAGCGGAATCGGGTAGT 61.446 60.000 0.00 0.00 35.33 2.73
150 151 0.311477 GAGAGCGGAATCGGGTAGTC 59.689 60.000 0.00 0.00 36.79 2.59
151 152 1.108132 AGAGCGGAATCGGGTAGTCC 61.108 60.000 0.00 0.00 39.06 3.85
163 164 1.066918 GTAGTCCGTACCATGCCCG 59.933 63.158 0.00 0.00 0.00 6.13
164 165 2.129146 TAGTCCGTACCATGCCCGG 61.129 63.158 9.00 9.00 43.03 5.73
166 167 3.463585 TCCGTACCATGCCCGGAC 61.464 66.667 0.73 0.00 45.20 4.79
167 168 3.467226 CCGTACCATGCCCGGACT 61.467 66.667 0.73 0.00 44.41 3.85
168 169 2.202878 CGTACCATGCCCGGACTG 60.203 66.667 0.73 0.00 0.00 3.51
169 170 2.513897 GTACCATGCCCGGACTGC 60.514 66.667 0.73 0.00 0.00 4.40
170 171 3.792736 TACCATGCCCGGACTGCC 61.793 66.667 0.73 0.00 0.00 4.85
176 177 4.966787 GCCCGGACTGCCACCAAA 62.967 66.667 0.73 0.00 0.00 3.28
177 178 2.672996 CCCGGACTGCCACCAAAG 60.673 66.667 0.73 0.00 0.00 2.77
178 179 2.672996 CCGGACTGCCACCAAAGG 60.673 66.667 0.00 0.00 0.00 3.11
179 180 2.429930 CGGACTGCCACCAAAGGA 59.570 61.111 0.00 0.00 0.00 3.36
180 181 1.672356 CGGACTGCCACCAAAGGAG 60.672 63.158 0.00 0.00 0.00 3.69
181 182 1.303643 GGACTGCCACCAAAGGAGG 60.304 63.158 0.00 0.00 36.51 4.30
182 183 1.761174 GACTGCCACCAAAGGAGGA 59.239 57.895 3.57 0.00 35.40 3.71
183 184 0.322008 GACTGCCACCAAAGGAGGAG 60.322 60.000 3.57 1.39 35.40 3.69
184 185 0.768221 ACTGCCACCAAAGGAGGAGA 60.768 55.000 3.57 0.00 35.40 3.71
185 186 0.401738 CTGCCACCAAAGGAGGAGAA 59.598 55.000 3.57 0.00 35.40 2.87
186 187 0.401738 TGCCACCAAAGGAGGAGAAG 59.598 55.000 3.57 0.00 35.40 2.85
187 188 0.322906 GCCACCAAAGGAGGAGAAGG 60.323 60.000 3.57 0.00 35.40 3.46
188 189 1.362224 CCACCAAAGGAGGAGAAGGA 58.638 55.000 0.00 0.00 35.40 3.36
189 190 1.280421 CCACCAAAGGAGGAGAAGGAG 59.720 57.143 0.00 0.00 35.40 3.69
190 191 1.280421 CACCAAAGGAGGAGAAGGAGG 59.720 57.143 0.00 0.00 0.00 4.30
191 192 1.152271 ACCAAAGGAGGAGAAGGAGGA 59.848 52.381 0.00 0.00 0.00 3.71
192 193 1.557371 CCAAAGGAGGAGAAGGAGGAC 59.443 57.143 0.00 0.00 0.00 3.85
193 194 2.260822 CAAAGGAGGAGAAGGAGGACA 58.739 52.381 0.00 0.00 0.00 4.02
194 195 2.639839 CAAAGGAGGAGAAGGAGGACAA 59.360 50.000 0.00 0.00 0.00 3.18
195 196 1.945580 AGGAGGAGAAGGAGGACAAC 58.054 55.000 0.00 0.00 0.00 3.32
196 197 1.150135 AGGAGGAGAAGGAGGACAACA 59.850 52.381 0.00 0.00 0.00 3.33
197 198 1.978580 GGAGGAGAAGGAGGACAACAA 59.021 52.381 0.00 0.00 0.00 2.83
198 199 2.289756 GGAGGAGAAGGAGGACAACAAC 60.290 54.545 0.00 0.00 0.00 3.32
199 200 1.344763 AGGAGAAGGAGGACAACAACG 59.655 52.381 0.00 0.00 0.00 4.10
200 201 1.608283 GGAGAAGGAGGACAACAACGG 60.608 57.143 0.00 0.00 0.00 4.44
201 202 1.070289 GAGAAGGAGGACAACAACGGT 59.930 52.381 0.00 0.00 0.00 4.83
202 203 1.202651 AGAAGGAGGACAACAACGGTG 60.203 52.381 0.00 0.00 0.00 4.94
203 204 0.834612 AAGGAGGACAACAACGGTGA 59.165 50.000 7.88 0.00 0.00 4.02
204 205 0.393077 AGGAGGACAACAACGGTGAG 59.607 55.000 7.88 0.90 0.00 3.51
205 206 0.602905 GGAGGACAACAACGGTGAGG 60.603 60.000 7.88 0.00 0.00 3.86
206 207 0.391597 GAGGACAACAACGGTGAGGA 59.608 55.000 7.88 0.00 0.00 3.71
207 208 0.106149 AGGACAACAACGGTGAGGAC 59.894 55.000 7.88 0.00 0.00 3.85
208 209 0.179067 GGACAACAACGGTGAGGACA 60.179 55.000 7.88 0.00 0.00 4.02
209 210 1.217882 GACAACAACGGTGAGGACAG 58.782 55.000 7.88 0.00 0.00 3.51
210 211 0.814010 ACAACAACGGTGAGGACAGC 60.814 55.000 7.88 0.00 40.59 4.40
211 212 0.532862 CAACAACGGTGAGGACAGCT 60.533 55.000 7.88 0.00 41.65 4.24
212 213 0.249911 AACAACGGTGAGGACAGCTC 60.250 55.000 7.88 0.00 41.65 4.09
213 214 1.374758 CAACGGTGAGGACAGCTCC 60.375 63.158 0.00 0.00 41.65 4.70
214 215 2.932234 AACGGTGAGGACAGCTCCG 61.932 63.158 6.24 6.24 42.22 4.63
215 216 4.135153 CGGTGAGGACAGCTCCGG 62.135 72.222 0.00 0.00 42.22 5.14
216 217 4.459089 GGTGAGGACAGCTCCGGC 62.459 72.222 0.00 0.00 42.22 6.13
226 227 3.688086 GCTCCGGCTCGATCCTAT 58.312 61.111 3.43 0.00 35.22 2.57
227 228 1.968310 GCTCCGGCTCGATCCTATT 59.032 57.895 3.43 0.00 35.22 1.73
228 229 0.389166 GCTCCGGCTCGATCCTATTG 60.389 60.000 3.43 0.00 35.22 1.90
229 230 0.389166 CTCCGGCTCGATCCTATTGC 60.389 60.000 3.43 0.00 0.00 3.56
230 231 1.734477 CCGGCTCGATCCTATTGCG 60.734 63.158 3.43 0.00 0.00 4.85
231 232 2.375766 CGGCTCGATCCTATTGCGC 61.376 63.158 0.00 0.00 0.00 6.09
232 233 2.029844 GGCTCGATCCTATTGCGCC 61.030 63.158 4.18 0.00 37.38 6.53
233 234 1.005630 GCTCGATCCTATTGCGCCT 60.006 57.895 4.18 0.00 0.00 5.52
234 235 0.601311 GCTCGATCCTATTGCGCCTT 60.601 55.000 4.18 0.00 0.00 4.35
235 236 1.423395 CTCGATCCTATTGCGCCTTC 58.577 55.000 4.18 0.00 0.00 3.46
236 237 0.318699 TCGATCCTATTGCGCCTTCG 60.319 55.000 4.18 3.18 39.07 3.79
237 238 0.318699 CGATCCTATTGCGCCTTCGA 60.319 55.000 4.18 0.00 38.10 3.71
238 239 1.140816 GATCCTATTGCGCCTTCGAC 58.859 55.000 4.18 0.00 38.10 4.20
239 240 0.249911 ATCCTATTGCGCCTTCGACC 60.250 55.000 4.18 0.00 38.10 4.79
240 241 2.237751 CCTATTGCGCCTTCGACCG 61.238 63.158 4.18 0.00 38.10 4.79
241 242 2.202824 TATTGCGCCTTCGACCGG 60.203 61.111 4.18 0.00 38.10 5.28
242 243 2.901051 CTATTGCGCCTTCGACCGGT 62.901 60.000 6.92 6.92 38.10 5.28
243 244 1.665264 TATTGCGCCTTCGACCGGTA 61.665 55.000 7.34 0.00 38.10 4.02
244 245 2.901051 ATTGCGCCTTCGACCGGTAG 62.901 60.000 7.34 8.08 38.10 3.18
245 246 4.125695 GCGCCTTCGACCGGTAGT 62.126 66.667 7.34 0.00 38.10 2.73
246 247 2.570181 CGCCTTCGACCGGTAGTT 59.430 61.111 7.34 0.00 38.10 2.24
247 248 1.515736 CGCCTTCGACCGGTAGTTC 60.516 63.158 7.34 0.00 38.10 3.01
248 249 1.153686 GCCTTCGACCGGTAGTTCC 60.154 63.158 7.34 0.00 0.00 3.62
249 250 1.880819 GCCTTCGACCGGTAGTTCCA 61.881 60.000 7.34 0.00 35.57 3.53
250 251 0.108945 CCTTCGACCGGTAGTTCCAC 60.109 60.000 7.34 0.00 35.57 4.02
251 252 0.455633 CTTCGACCGGTAGTTCCACG 60.456 60.000 7.34 4.90 35.57 4.94
252 253 0.888736 TTCGACCGGTAGTTCCACGA 60.889 55.000 7.34 7.80 35.49 4.35
253 254 1.136147 CGACCGGTAGTTCCACGAG 59.864 63.158 7.34 0.00 35.57 4.18
254 255 1.300971 CGACCGGTAGTTCCACGAGA 61.301 60.000 7.34 0.00 35.57 4.04
255 256 0.883833 GACCGGTAGTTCCACGAGAA 59.116 55.000 7.34 0.00 35.57 2.87
256 257 0.886563 ACCGGTAGTTCCACGAGAAG 59.113 55.000 4.49 0.00 34.29 2.85
257 258 0.172803 CCGGTAGTTCCACGAGAAGG 59.827 60.000 0.00 0.00 34.29 3.46
258 259 1.171308 CGGTAGTTCCACGAGAAGGA 58.829 55.000 0.00 0.00 34.29 3.36
259 260 1.135460 CGGTAGTTCCACGAGAAGGAC 60.135 57.143 0.00 0.00 34.29 3.85
260 261 1.135460 GGTAGTTCCACGAGAAGGACG 60.135 57.143 0.00 0.00 34.29 4.79
261 262 1.808945 GTAGTTCCACGAGAAGGACGA 59.191 52.381 0.00 0.00 34.29 4.20
262 263 0.597072 AGTTCCACGAGAAGGACGAC 59.403 55.000 0.00 0.00 34.29 4.34
263 264 0.313043 GTTCCACGAGAAGGACGACA 59.687 55.000 0.00 0.00 34.29 4.35
264 265 1.034356 TTCCACGAGAAGGACGACAA 58.966 50.000 0.00 0.00 34.19 3.18
265 266 1.254026 TCCACGAGAAGGACGACAAT 58.746 50.000 0.00 0.00 34.70 2.71
266 267 1.067846 TCCACGAGAAGGACGACAATG 60.068 52.381 0.00 0.00 34.70 2.82
267 268 1.350193 CACGAGAAGGACGACAATGG 58.650 55.000 0.00 0.00 34.70 3.16
268 269 0.389948 ACGAGAAGGACGACAATGGC 60.390 55.000 0.00 0.00 34.70 4.40
269 270 1.413767 CGAGAAGGACGACAATGGCG 61.414 60.000 7.07 7.07 0.00 5.69
270 271 1.696832 GAGAAGGACGACAATGGCGC 61.697 60.000 9.06 0.00 0.00 6.53
271 272 2.746277 AAGGACGACAATGGCGCC 60.746 61.111 22.73 22.73 0.00 6.53
274 275 4.147322 GACGACAATGGCGCCGTG 62.147 66.667 24.67 24.38 35.22 4.94
275 276 4.673298 ACGACAATGGCGCCGTGA 62.673 61.111 30.44 12.19 33.69 4.35
276 277 3.418913 CGACAATGGCGCCGTGAA 61.419 61.111 30.44 11.81 0.00 3.18
277 278 2.480555 GACAATGGCGCCGTGAAG 59.519 61.111 30.44 21.67 0.00 3.02
278 279 3.039202 GACAATGGCGCCGTGAAGG 62.039 63.158 30.44 19.20 44.97 3.46
279 280 3.814268 CAATGGCGCCGTGAAGGG 61.814 66.667 24.67 6.02 41.48 3.95
287 288 2.429930 CCGTGAAGGGCAAGGTCA 59.570 61.111 0.00 0.00 40.74 4.02
288 289 1.672356 CCGTGAAGGGCAAGGTCAG 60.672 63.158 0.00 0.00 40.74 3.51
289 290 2.328099 CGTGAAGGGCAAGGTCAGC 61.328 63.158 0.00 0.00 0.00 4.26
296 297 4.115199 GCAAGGTCAGCCGGGGAT 62.115 66.667 2.18 0.00 40.50 3.85
297 298 2.124570 CAAGGTCAGCCGGGGATG 60.125 66.667 2.18 0.00 40.50 3.51
298 299 2.285368 AAGGTCAGCCGGGGATGA 60.285 61.111 2.18 0.68 38.28 2.92
299 300 1.694169 AAGGTCAGCCGGGGATGAT 60.694 57.895 9.11 0.00 42.66 2.45
300 301 1.700042 AAGGTCAGCCGGGGATGATC 61.700 60.000 9.11 8.62 42.66 2.92
301 302 2.143419 GGTCAGCCGGGGATGATCT 61.143 63.158 9.11 0.00 42.66 2.75
302 303 1.700042 GGTCAGCCGGGGATGATCTT 61.700 60.000 9.11 0.00 42.66 2.40
303 304 0.533755 GTCAGCCGGGGATGATCTTG 60.534 60.000 9.11 0.00 42.66 3.02
304 305 0.982852 TCAGCCGGGGATGATCTTGT 60.983 55.000 2.18 0.00 35.47 3.16
305 306 0.533755 CAGCCGGGGATGATCTTGTC 60.534 60.000 2.18 0.00 32.62 3.18
306 307 1.227973 GCCGGGGATGATCTTGTCC 60.228 63.158 2.18 0.00 0.00 4.02
307 308 1.983119 GCCGGGGATGATCTTGTCCA 61.983 60.000 2.18 0.00 36.19 4.02
308 309 0.179045 CCGGGGATGATCTTGTCCAC 60.179 60.000 12.37 8.86 36.19 4.02
309 310 0.179045 CGGGGATGATCTTGTCCACC 60.179 60.000 12.37 10.21 34.30 4.61
310 311 0.918983 GGGGATGATCTTGTCCACCA 59.081 55.000 12.37 0.00 36.19 4.17
311 312 1.496429 GGGGATGATCTTGTCCACCAT 59.504 52.381 12.37 0.00 36.19 3.55
312 313 2.711009 GGGGATGATCTTGTCCACCATA 59.289 50.000 12.37 0.00 36.19 2.74
313 314 3.244700 GGGGATGATCTTGTCCACCATAG 60.245 52.174 12.37 0.00 36.19 2.23
314 315 3.406764 GGATGATCTTGTCCACCATAGC 58.593 50.000 7.28 0.00 34.57 2.97
315 316 3.406764 GATGATCTTGTCCACCATAGCC 58.593 50.000 0.00 0.00 0.00 3.93
316 317 2.195727 TGATCTTGTCCACCATAGCCA 58.804 47.619 0.00 0.00 0.00 4.75
317 318 2.575735 TGATCTTGTCCACCATAGCCAA 59.424 45.455 0.00 0.00 0.00 4.52
318 319 3.010027 TGATCTTGTCCACCATAGCCAAA 59.990 43.478 0.00 0.00 0.00 3.28
319 320 2.790433 TCTTGTCCACCATAGCCAAAC 58.210 47.619 0.00 0.00 0.00 2.93
320 321 2.107378 TCTTGTCCACCATAGCCAAACA 59.893 45.455 0.00 0.00 0.00 2.83
321 322 2.897271 TGTCCACCATAGCCAAACAT 57.103 45.000 0.00 0.00 0.00 2.71
322 323 2.445427 TGTCCACCATAGCCAAACATG 58.555 47.619 0.00 0.00 0.00 3.21
323 324 1.134946 GTCCACCATAGCCAAACATGC 59.865 52.381 0.00 0.00 0.00 4.06
324 325 0.461135 CCACCATAGCCAAACATGCC 59.539 55.000 0.00 0.00 0.00 4.40
325 326 1.184431 CACCATAGCCAAACATGCCA 58.816 50.000 0.00 0.00 0.00 4.92
326 327 1.549620 CACCATAGCCAAACATGCCAA 59.450 47.619 0.00 0.00 0.00 4.52
327 328 2.028294 CACCATAGCCAAACATGCCAAA 60.028 45.455 0.00 0.00 0.00 3.28
328 329 2.636893 ACCATAGCCAAACATGCCAAAA 59.363 40.909 0.00 0.00 0.00 2.44
329 330 3.072184 ACCATAGCCAAACATGCCAAAAA 59.928 39.130 0.00 0.00 0.00 1.94
330 331 4.263418 ACCATAGCCAAACATGCCAAAAAT 60.263 37.500 0.00 0.00 0.00 1.82
331 332 4.701171 CCATAGCCAAACATGCCAAAAATT 59.299 37.500 0.00 0.00 0.00 1.82
332 333 5.392165 CCATAGCCAAACATGCCAAAAATTG 60.392 40.000 0.00 0.00 0.00 2.32
333 334 3.818180 AGCCAAACATGCCAAAAATTGA 58.182 36.364 0.00 0.00 0.00 2.57
334 335 4.400120 AGCCAAACATGCCAAAAATTGAT 58.600 34.783 0.00 0.00 0.00 2.57
335 336 5.558818 AGCCAAACATGCCAAAAATTGATA 58.441 33.333 0.00 0.00 0.00 2.15
336 337 5.644636 AGCCAAACATGCCAAAAATTGATAG 59.355 36.000 0.00 0.00 0.00 2.08
337 338 5.412286 GCCAAACATGCCAAAAATTGATAGT 59.588 36.000 0.00 0.00 0.00 2.12
338 339 6.402442 GCCAAACATGCCAAAAATTGATAGTC 60.402 38.462 0.00 0.00 0.00 2.59
339 340 6.092533 CCAAACATGCCAAAAATTGATAGTCC 59.907 38.462 0.00 0.00 0.00 3.85
340 341 4.997565 ACATGCCAAAAATTGATAGTCCG 58.002 39.130 0.00 0.00 0.00 4.79
341 342 4.142182 ACATGCCAAAAATTGATAGTCCGG 60.142 41.667 0.00 0.00 0.00 5.14
342 343 3.426615 TGCCAAAAATTGATAGTCCGGT 58.573 40.909 0.00 0.00 0.00 5.28
343 344 3.192422 TGCCAAAAATTGATAGTCCGGTG 59.808 43.478 0.00 0.00 0.00 4.94
344 345 3.428862 GCCAAAAATTGATAGTCCGGTGG 60.429 47.826 0.00 0.00 0.00 4.61
345 346 3.428862 CCAAAAATTGATAGTCCGGTGGC 60.429 47.826 0.00 0.00 0.00 5.01
346 347 2.799126 AAATTGATAGTCCGGTGGCA 57.201 45.000 0.00 0.00 0.00 4.92
347 348 3.297134 AAATTGATAGTCCGGTGGCAT 57.703 42.857 0.00 0.00 0.00 4.40
348 349 2.260844 ATTGATAGTCCGGTGGCATG 57.739 50.000 0.00 0.00 0.00 4.06
349 350 0.908910 TTGATAGTCCGGTGGCATGT 59.091 50.000 0.00 0.00 0.00 3.21
350 351 0.177836 TGATAGTCCGGTGGCATGTG 59.822 55.000 0.00 0.00 0.00 3.21
351 352 0.532862 GATAGTCCGGTGGCATGTGG 60.533 60.000 0.00 0.00 0.00 4.17
352 353 2.608970 ATAGTCCGGTGGCATGTGGC 62.609 60.000 0.00 0.00 43.74 5.01
364 365 3.951979 GCATGTGGCAATGTAGTAGTC 57.048 47.619 0.00 0.00 43.97 2.59
365 366 3.270027 GCATGTGGCAATGTAGTAGTCA 58.730 45.455 0.00 0.00 43.97 3.41
366 367 3.310774 GCATGTGGCAATGTAGTAGTCAG 59.689 47.826 0.00 0.00 43.97 3.51
367 368 4.758688 CATGTGGCAATGTAGTAGTCAGA 58.241 43.478 0.00 0.00 0.00 3.27
368 369 4.188247 TGTGGCAATGTAGTAGTCAGAC 57.812 45.455 0.00 0.00 0.00 3.51
369 370 3.179830 GTGGCAATGTAGTAGTCAGACG 58.820 50.000 0.00 0.00 0.00 4.18
370 371 3.086282 TGGCAATGTAGTAGTCAGACGA 58.914 45.455 0.00 0.00 0.00 4.20
371 372 3.699538 TGGCAATGTAGTAGTCAGACGAT 59.300 43.478 0.00 0.00 0.00 3.73
372 373 4.045104 GGCAATGTAGTAGTCAGACGATG 58.955 47.826 0.00 0.00 0.00 3.84
373 374 4.440250 GGCAATGTAGTAGTCAGACGATGT 60.440 45.833 0.00 0.00 0.00 3.06
374 375 4.500837 GCAATGTAGTAGTCAGACGATGTG 59.499 45.833 0.00 0.00 0.00 3.21
375 376 5.641709 CAATGTAGTAGTCAGACGATGTGT 58.358 41.667 0.00 0.00 0.00 3.72
376 377 6.677187 GCAATGTAGTAGTCAGACGATGTGTA 60.677 42.308 0.00 0.00 0.00 2.90
377 378 6.997239 ATGTAGTAGTCAGACGATGTGTAA 57.003 37.500 0.00 0.00 0.00 2.41
378 379 6.806388 TGTAGTAGTCAGACGATGTGTAAA 57.194 37.500 0.00 0.00 0.00 2.01
379 380 7.387119 TGTAGTAGTCAGACGATGTGTAAAT 57.613 36.000 0.00 0.00 0.00 1.40
380 381 7.248437 TGTAGTAGTCAGACGATGTGTAAATG 58.752 38.462 0.00 0.00 0.00 2.32
381 382 5.103000 AGTAGTCAGACGATGTGTAAATGC 58.897 41.667 0.00 0.00 0.00 3.56
382 383 3.925379 AGTCAGACGATGTGTAAATGCA 58.075 40.909 0.00 0.00 0.00 3.96
383 384 4.507710 AGTCAGACGATGTGTAAATGCAT 58.492 39.130 0.00 0.00 0.00 3.96
384 385 4.568359 AGTCAGACGATGTGTAAATGCATC 59.432 41.667 0.00 0.00 38.40 3.91
392 393 4.994220 TGTGTAAATGCATCGTTTACGT 57.006 36.364 13.84 0.00 44.22 3.57
393 394 6.650239 ATGTGTAAATGCATCGTTTACGTA 57.350 33.333 13.84 0.00 44.22 3.57
394 395 6.085121 TGTGTAAATGCATCGTTTACGTAG 57.915 37.500 13.84 0.00 44.22 3.51
395 396 5.634439 TGTGTAAATGCATCGTTTACGTAGT 59.366 36.000 13.84 0.00 44.22 2.73
396 397 6.145858 TGTGTAAATGCATCGTTTACGTAGTT 59.854 34.615 13.84 0.00 44.22 2.24
397 398 6.460452 GTGTAAATGCATCGTTTACGTAGTTG 59.540 38.462 13.84 0.00 44.22 3.16
398 399 3.651562 ATGCATCGTTTACGTAGTTGC 57.348 42.857 0.00 8.60 37.78 4.17
399 400 2.405172 TGCATCGTTTACGTAGTTGCA 58.595 42.857 12.46 12.46 37.78 4.08
400 401 2.997303 TGCATCGTTTACGTAGTTGCAT 59.003 40.909 12.46 0.00 37.78 3.96
401 402 3.181525 TGCATCGTTTACGTAGTTGCATG 60.182 43.478 12.46 6.95 37.78 4.06
402 403 3.061563 GCATCGTTTACGTAGTTGCATGA 59.938 43.478 0.00 0.52 37.78 3.07
403 404 4.779082 GCATCGTTTACGTAGTTGCATGAG 60.779 45.833 0.00 0.00 37.78 2.90
404 405 3.904571 TCGTTTACGTAGTTGCATGAGT 58.095 40.909 0.00 0.00 37.78 3.41
405 406 4.300803 TCGTTTACGTAGTTGCATGAGTT 58.699 39.130 0.00 0.00 37.78 3.01
406 407 4.746115 TCGTTTACGTAGTTGCATGAGTTT 59.254 37.500 0.00 0.00 37.78 2.66
407 408 4.838642 CGTTTACGTAGTTGCATGAGTTTG 59.161 41.667 0.00 0.00 37.78 2.93
408 409 5.557514 CGTTTACGTAGTTGCATGAGTTTGT 60.558 40.000 0.00 0.00 37.78 2.83
409 410 6.345961 CGTTTACGTAGTTGCATGAGTTTGTA 60.346 38.462 0.00 0.00 37.78 2.41
410 411 7.515643 GTTTACGTAGTTGCATGAGTTTGTAT 58.484 34.615 0.00 0.00 37.78 2.29
411 412 5.530519 ACGTAGTTGCATGAGTTTGTATG 57.469 39.130 0.00 0.00 37.78 2.39
412 413 4.391830 ACGTAGTTGCATGAGTTTGTATGG 59.608 41.667 0.00 0.00 37.78 2.74
413 414 4.629634 CGTAGTTGCATGAGTTTGTATGGA 59.370 41.667 0.00 0.00 0.00 3.41
414 415 5.294306 CGTAGTTGCATGAGTTTGTATGGAT 59.706 40.000 0.00 0.00 0.00 3.41
415 416 6.183360 CGTAGTTGCATGAGTTTGTATGGATT 60.183 38.462 0.00 0.00 0.00 3.01
416 417 6.594788 AGTTGCATGAGTTTGTATGGATTT 57.405 33.333 0.00 0.00 0.00 2.17
417 418 6.392354 AGTTGCATGAGTTTGTATGGATTTG 58.608 36.000 0.00 0.00 0.00 2.32
418 419 6.209192 AGTTGCATGAGTTTGTATGGATTTGA 59.791 34.615 0.00 0.00 0.00 2.69
419 420 6.198650 TGCATGAGTTTGTATGGATTTGAG 57.801 37.500 0.00 0.00 0.00 3.02
420 421 5.125900 TGCATGAGTTTGTATGGATTTGAGG 59.874 40.000 0.00 0.00 0.00 3.86
421 422 5.126061 GCATGAGTTTGTATGGATTTGAGGT 59.874 40.000 0.00 0.00 0.00 3.85
422 423 6.318648 GCATGAGTTTGTATGGATTTGAGGTA 59.681 38.462 0.00 0.00 0.00 3.08
423 424 7.013655 GCATGAGTTTGTATGGATTTGAGGTAT 59.986 37.037 0.00 0.00 0.00 2.73
424 425 7.864108 TGAGTTTGTATGGATTTGAGGTATG 57.136 36.000 0.00 0.00 0.00 2.39
425 426 6.318648 TGAGTTTGTATGGATTTGAGGTATGC 59.681 38.462 0.00 0.00 0.00 3.14
426 427 6.426587 AGTTTGTATGGATTTGAGGTATGCT 58.573 36.000 0.00 0.00 0.00 3.79
427 428 7.573710 AGTTTGTATGGATTTGAGGTATGCTA 58.426 34.615 0.00 0.00 0.00 3.49
428 429 8.052748 AGTTTGTATGGATTTGAGGTATGCTAA 58.947 33.333 0.00 0.00 0.00 3.09
429 430 8.850156 GTTTGTATGGATTTGAGGTATGCTAAT 58.150 33.333 0.00 0.00 0.00 1.73
430 431 8.995027 TTGTATGGATTTGAGGTATGCTAATT 57.005 30.769 0.00 0.00 0.00 1.40
431 432 8.394971 TGTATGGATTTGAGGTATGCTAATTG 57.605 34.615 0.00 0.00 0.00 2.32
432 433 8.217111 TGTATGGATTTGAGGTATGCTAATTGA 58.783 33.333 0.00 0.00 0.00 2.57
433 434 7.756395 ATGGATTTGAGGTATGCTAATTGAG 57.244 36.000 0.00 0.00 0.00 3.02
434 435 6.662755 TGGATTTGAGGTATGCTAATTGAGT 58.337 36.000 0.00 0.00 0.00 3.41
435 436 6.767902 TGGATTTGAGGTATGCTAATTGAGTC 59.232 38.462 0.00 0.00 0.00 3.36
436 437 6.073548 GGATTTGAGGTATGCTAATTGAGTCG 60.074 42.308 0.00 0.00 0.00 4.18
437 438 5.592104 TTGAGGTATGCTAATTGAGTCGA 57.408 39.130 0.00 0.00 0.00 4.20
438 439 4.933330 TGAGGTATGCTAATTGAGTCGAC 58.067 43.478 7.70 7.70 0.00 4.20
439 440 4.202121 TGAGGTATGCTAATTGAGTCGACC 60.202 45.833 13.01 4.42 0.00 4.79
440 441 3.050619 GGTATGCTAATTGAGTCGACCG 58.949 50.000 13.01 0.00 0.00 4.79
441 442 2.225068 ATGCTAATTGAGTCGACCGG 57.775 50.000 13.01 0.00 0.00 5.28
442 443 0.892755 TGCTAATTGAGTCGACCGGT 59.107 50.000 6.92 6.92 0.00 5.28
443 444 1.274167 TGCTAATTGAGTCGACCGGTT 59.726 47.619 9.42 5.19 0.00 4.44
444 445 1.659098 GCTAATTGAGTCGACCGGTTG 59.341 52.381 16.40 16.40 0.00 3.77
445 446 1.659098 CTAATTGAGTCGACCGGTTGC 59.341 52.381 17.75 12.14 0.00 4.17
446 447 1.289109 AATTGAGTCGACCGGTTGCG 61.289 55.000 17.75 13.33 0.00 4.85
447 448 2.149803 ATTGAGTCGACCGGTTGCGA 62.150 55.000 17.75 15.66 0.00 5.10
448 449 2.504244 GAGTCGACCGGTTGCGAG 60.504 66.667 17.73 3.91 37.18 5.03
449 450 2.974489 GAGTCGACCGGTTGCGAGA 61.974 63.158 17.73 6.15 37.18 4.04
450 451 2.049802 GTCGACCGGTTGCGAGAA 60.050 61.111 17.73 0.00 37.18 2.87
451 452 2.087009 GTCGACCGGTTGCGAGAAG 61.087 63.158 17.73 0.00 37.18 2.85
452 453 2.809601 CGACCGGTTGCGAGAAGG 60.810 66.667 9.42 0.00 0.00 3.46
453 454 2.654877 GACCGGTTGCGAGAAGGA 59.345 61.111 9.42 0.00 0.00 3.36
454 455 1.005394 GACCGGTTGCGAGAAGGAA 60.005 57.895 9.42 0.00 0.00 3.36
455 456 0.601841 GACCGGTTGCGAGAAGGAAA 60.602 55.000 9.42 0.00 0.00 3.13
456 457 0.179040 ACCGGTTGCGAGAAGGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
457 458 1.165270 CCGGTTGCGAGAAGGAAAAT 58.835 50.000 0.00 0.00 0.00 1.82
458 459 1.539827 CCGGTTGCGAGAAGGAAAATT 59.460 47.619 0.00 0.00 0.00 1.82
459 460 2.030274 CCGGTTGCGAGAAGGAAAATTT 60.030 45.455 0.00 0.00 0.00 1.82
460 461 3.552068 CCGGTTGCGAGAAGGAAAATTTT 60.552 43.478 2.28 2.28 0.00 1.82
461 462 4.320641 CCGGTTGCGAGAAGGAAAATTTTA 60.321 41.667 2.75 0.00 0.00 1.52
462 463 5.399013 CGGTTGCGAGAAGGAAAATTTTAT 58.601 37.500 2.75 0.00 0.00 1.40
463 464 5.286082 CGGTTGCGAGAAGGAAAATTTTATG 59.714 40.000 2.75 0.00 0.00 1.90
464 465 5.062183 GGTTGCGAGAAGGAAAATTTTATGC 59.938 40.000 2.75 1.71 0.00 3.14
465 466 5.643379 TGCGAGAAGGAAAATTTTATGCT 57.357 34.783 2.75 0.00 0.00 3.79
466 467 6.024552 TGCGAGAAGGAAAATTTTATGCTT 57.975 33.333 2.75 0.00 0.00 3.91
467 468 5.863397 TGCGAGAAGGAAAATTTTATGCTTG 59.137 36.000 2.75 5.14 0.00 4.01
468 469 6.092748 GCGAGAAGGAAAATTTTATGCTTGA 58.907 36.000 2.75 0.00 0.00 3.02
469 470 6.033937 GCGAGAAGGAAAATTTTATGCTTGAC 59.966 38.462 2.75 0.00 0.00 3.18
470 471 6.528072 CGAGAAGGAAAATTTTATGCTTGACC 59.472 38.462 2.75 0.00 0.00 4.02
471 472 7.544804 AGAAGGAAAATTTTATGCTTGACCT 57.455 32.000 2.75 0.65 0.00 3.85
472 473 7.381323 AGAAGGAAAATTTTATGCTTGACCTG 58.619 34.615 2.75 0.00 0.00 4.00
473 474 6.670695 AGGAAAATTTTATGCTTGACCTGT 57.329 33.333 2.75 0.00 0.00 4.00
474 475 6.458210 AGGAAAATTTTATGCTTGACCTGTG 58.542 36.000 2.75 0.00 0.00 3.66
475 476 6.267471 AGGAAAATTTTATGCTTGACCTGTGA 59.733 34.615 2.75 0.00 0.00 3.58
476 477 6.587608 GGAAAATTTTATGCTTGACCTGTGAG 59.412 38.462 2.75 0.00 0.00 3.51
477 478 4.708726 ATTTTATGCTTGACCTGTGAGC 57.291 40.909 0.00 0.00 36.95 4.26
478 479 1.725641 TTATGCTTGACCTGTGAGCG 58.274 50.000 0.00 0.00 39.23 5.03
479 480 0.608130 TATGCTTGACCTGTGAGCGT 59.392 50.000 0.00 0.00 39.23 5.07
480 481 0.671781 ATGCTTGACCTGTGAGCGTC 60.672 55.000 0.00 0.00 39.23 5.19
481 482 2.029844 GCTTGACCTGTGAGCGTCC 61.030 63.158 0.00 0.00 0.00 4.79
482 483 1.734477 CTTGACCTGTGAGCGTCCG 60.734 63.158 0.00 0.00 0.00 4.79
483 484 3.858868 TTGACCTGTGAGCGTCCGC 62.859 63.158 2.94 2.94 42.33 5.54
494 495 3.845472 CGTCCGCGGGCGTTTAAG 61.845 66.667 41.78 15.36 37.81 1.85
495 496 3.493440 GTCCGCGGGCGTTTAAGG 61.493 66.667 27.83 0.00 37.81 2.69
496 497 4.763646 TCCGCGGGCGTTTAAGGG 62.764 66.667 27.83 0.00 37.81 3.95
499 500 3.129502 GCGGGCGTTTAAGGGGTC 61.130 66.667 0.00 0.00 0.00 4.46
500 501 2.816520 CGGGCGTTTAAGGGGTCG 60.817 66.667 0.00 0.00 0.00 4.79
501 502 2.437180 GGGCGTTTAAGGGGTCGG 60.437 66.667 0.00 0.00 0.00 4.79
502 503 2.664398 GGCGTTTAAGGGGTCGGA 59.336 61.111 0.00 0.00 0.00 4.55
503 504 1.222661 GGCGTTTAAGGGGTCGGAT 59.777 57.895 0.00 0.00 0.00 4.18
504 505 0.393402 GGCGTTTAAGGGGTCGGATT 60.393 55.000 0.00 0.00 0.00 3.01
505 506 1.456296 GCGTTTAAGGGGTCGGATTT 58.544 50.000 0.00 0.00 0.00 2.17
506 507 1.131693 GCGTTTAAGGGGTCGGATTTG 59.868 52.381 0.00 0.00 0.00 2.32
507 508 1.741145 CGTTTAAGGGGTCGGATTTGG 59.259 52.381 0.00 0.00 0.00 3.28
508 509 2.097036 GTTTAAGGGGTCGGATTTGGG 58.903 52.381 0.00 0.00 0.00 4.12
509 510 0.626916 TTAAGGGGTCGGATTTGGGG 59.373 55.000 0.00 0.00 0.00 4.96
510 511 1.928714 TAAGGGGTCGGATTTGGGGC 61.929 60.000 0.00 0.00 0.00 5.80
512 513 4.419921 GGGTCGGATTTGGGGCGT 62.420 66.667 0.00 0.00 0.00 5.68
513 514 2.822701 GGTCGGATTTGGGGCGTC 60.823 66.667 0.00 0.00 0.00 5.19
514 515 2.822701 GTCGGATTTGGGGCGTCC 60.823 66.667 0.00 0.00 0.00 4.79
518 519 4.419921 GATTTGGGGCGTCCGGGT 62.420 66.667 0.00 0.00 38.76 5.28
519 520 4.733542 ATTTGGGGCGTCCGGGTG 62.734 66.667 0.00 0.00 38.76 4.61
524 525 3.152400 GGGCGTCCGGGTGTAGAT 61.152 66.667 0.00 0.00 0.00 1.98
525 526 2.106332 GGCGTCCGGGTGTAGATG 59.894 66.667 0.00 0.00 0.00 2.90
526 527 2.106332 GCGTCCGGGTGTAGATGG 59.894 66.667 0.00 0.00 0.00 3.51
568 569 1.180029 ATTAAGCTGCTGCCAAGTGG 58.820 50.000 12.44 0.00 40.80 4.00
581 582 1.066430 CCAAGTGGCACATAGGTACGT 60.066 52.381 21.41 0.00 44.52 3.57
582 583 2.166870 CCAAGTGGCACATAGGTACGTA 59.833 50.000 21.41 0.00 44.52 3.57
583 584 3.184541 CAAGTGGCACATAGGTACGTAC 58.815 50.000 21.41 17.56 44.52 3.67
584 585 1.402968 AGTGGCACATAGGTACGTACG 59.597 52.381 21.41 15.01 44.52 3.67
607 608 4.814294 GCCCACGTACCTGAGCGG 62.814 72.222 0.00 0.00 39.35 5.52
626 627 0.778815 GCGTGAGTCAAGTCAAGTCG 59.221 55.000 7.91 0.00 0.00 4.18
627 628 1.864435 GCGTGAGTCAAGTCAAGTCGT 60.864 52.381 7.91 0.00 0.00 4.34
630 631 3.187700 GTGAGTCAAGTCAAGTCGTGTT 58.812 45.455 0.00 0.00 0.00 3.32
631 632 3.243177 GTGAGTCAAGTCAAGTCGTGTTC 59.757 47.826 0.00 0.00 0.00 3.18
657 667 1.142965 CGTCTCACACCACACCACA 59.857 57.895 0.00 0.00 0.00 4.17
659 669 0.814010 GTCTCACACCACACCACACC 60.814 60.000 0.00 0.00 0.00 4.16
660 670 1.525995 CTCACACCACACCACACCC 60.526 63.158 0.00 0.00 0.00 4.61
663 673 2.899838 CACCACACCACACCCACG 60.900 66.667 0.00 0.00 0.00 4.94
714 727 1.729470 CCTGCTCGACGGTGCTCTAT 61.729 60.000 13.13 0.00 33.89 1.98
719 732 2.158058 GCTCGACGGTGCTCTATAGTAG 59.842 54.545 0.00 0.00 0.00 2.57
720 733 3.391965 CTCGACGGTGCTCTATAGTAGT 58.608 50.000 0.00 0.00 0.00 2.73
721 734 4.554292 CTCGACGGTGCTCTATAGTAGTA 58.446 47.826 0.00 0.00 0.00 1.82
722 735 4.554292 TCGACGGTGCTCTATAGTAGTAG 58.446 47.826 0.00 0.00 0.00 2.57
723 736 3.123284 CGACGGTGCTCTATAGTAGTAGC 59.877 52.174 0.00 1.98 35.51 3.58
724 737 4.317488 GACGGTGCTCTATAGTAGTAGCT 58.683 47.826 11.27 0.00 35.95 3.32
725 738 4.716794 ACGGTGCTCTATAGTAGTAGCTT 58.283 43.478 11.27 3.78 35.95 3.74
726 739 4.756135 ACGGTGCTCTATAGTAGTAGCTTC 59.244 45.833 11.27 0.00 35.95 3.86
727 740 4.755629 CGGTGCTCTATAGTAGTAGCTTCA 59.244 45.833 11.27 0.00 35.95 3.02
728 741 5.334260 CGGTGCTCTATAGTAGTAGCTTCAC 60.334 48.000 11.27 3.30 35.95 3.18
729 742 5.766174 GGTGCTCTATAGTAGTAGCTTCACT 59.234 44.000 11.27 0.00 35.95 3.41
730 743 6.072893 GGTGCTCTATAGTAGTAGCTTCACTC 60.073 46.154 11.27 0.00 35.95 3.51
731 744 5.697178 TGCTCTATAGTAGTAGCTTCACTCG 59.303 44.000 11.27 0.00 35.95 4.18
732 745 5.697633 GCTCTATAGTAGTAGCTTCACTCGT 59.302 44.000 0.00 0.00 32.18 4.18
733 746 6.203338 GCTCTATAGTAGTAGCTTCACTCGTT 59.797 42.308 0.00 0.00 32.18 3.85
734 747 7.254863 GCTCTATAGTAGTAGCTTCACTCGTTT 60.255 40.741 0.00 0.00 32.18 3.60
735 748 8.140677 TCTATAGTAGTAGCTTCACTCGTTTC 57.859 38.462 0.00 0.00 0.00 2.78
736 749 6.754702 ATAGTAGTAGCTTCACTCGTTTCA 57.245 37.500 0.00 0.00 0.00 2.69
737 750 5.049398 AGTAGTAGCTTCACTCGTTTCAG 57.951 43.478 0.00 0.00 0.00 3.02
738 751 2.678324 AGTAGCTTCACTCGTTTCAGC 58.322 47.619 0.00 0.00 0.00 4.26
739 752 1.387084 GTAGCTTCACTCGTTTCAGCG 59.613 52.381 0.00 0.00 35.53 5.18
740 753 0.249489 AGCTTCACTCGTTTCAGCGT 60.249 50.000 0.00 0.00 35.53 5.07
787 800 4.436998 CCCTCTCCGCGTCCACAC 62.437 72.222 4.92 0.00 0.00 3.82
822 840 6.645003 GCCAAACCAAACCATTTTTCTACTAG 59.355 38.462 0.00 0.00 0.00 2.57
883 904 4.722535 TGGGCCGCTTCTCCTCCT 62.723 66.667 0.00 0.00 0.00 3.69
885 906 3.855853 GGCCGCTTCTCCTCCTCC 61.856 72.222 0.00 0.00 0.00 4.30
886 907 2.762043 GCCGCTTCTCCTCCTCCT 60.762 66.667 0.00 0.00 0.00 3.69
887 908 2.791868 GCCGCTTCTCCTCCTCCTC 61.792 68.421 0.00 0.00 0.00 3.71
888 909 2.485795 CCGCTTCTCCTCCTCCTCG 61.486 68.421 0.00 0.00 0.00 4.63
889 910 2.811799 GCTTCTCCTCCTCCTCGC 59.188 66.667 0.00 0.00 0.00 5.03
890 911 1.756561 GCTTCTCCTCCTCCTCGCT 60.757 63.158 0.00 0.00 0.00 4.93
891 912 1.734388 GCTTCTCCTCCTCCTCGCTC 61.734 65.000 0.00 0.00 0.00 5.03
892 913 0.106719 CTTCTCCTCCTCCTCGCTCT 60.107 60.000 0.00 0.00 0.00 4.09
893 914 0.106918 TTCTCCTCCTCCTCGCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
894 915 0.986019 TCTCCTCCTCCTCGCTCTCT 60.986 60.000 0.00 0.00 0.00 3.10
895 916 0.535102 CTCCTCCTCCTCGCTCTCTC 60.535 65.000 0.00 0.00 0.00 3.20
896 917 1.528309 CCTCCTCCTCGCTCTCTCC 60.528 68.421 0.00 0.00 0.00 3.71
897 918 1.225983 CTCCTCCTCGCTCTCTCCA 59.774 63.158 0.00 0.00 0.00 3.86
906 927 1.406898 TCGCTCTCTCCACAGCATAAG 59.593 52.381 0.00 0.00 35.15 1.73
969 991 2.105466 GCTGCCTTCTCTCGCCAAG 61.105 63.158 0.00 0.00 0.00 3.61
970 992 1.593787 CTGCCTTCTCTCGCCAAGA 59.406 57.895 0.00 0.00 0.00 3.02
971 993 0.036952 CTGCCTTCTCTCGCCAAGAA 60.037 55.000 0.00 0.00 32.23 2.52
1020 1048 0.325671 TGATCCTCTCGGCCTTCCTT 60.326 55.000 0.00 0.00 0.00 3.36
1023 1051 0.684805 TCCTCTCGGCCTTCCTTCTC 60.685 60.000 0.00 0.00 0.00 2.87
1024 1052 0.972983 CCTCTCGGCCTTCCTTCTCA 60.973 60.000 0.00 0.00 0.00 3.27
1109 1143 3.457012 TCATCTGAAATGGGAGCAGATCA 59.543 43.478 0.00 0.00 44.97 2.92
1110 1144 4.104261 TCATCTGAAATGGGAGCAGATCAT 59.896 41.667 0.00 0.00 44.97 2.45
1111 1145 4.082665 TCTGAAATGGGAGCAGATCATC 57.917 45.455 0.00 0.00 34.02 2.92
1125 1159 4.379603 GCAGATCATCATCAAGCTTATGGC 60.380 45.833 0.00 0.00 42.19 4.40
1155 1197 1.732259 CAGGTAACGAAGATGGTGTGC 59.268 52.381 0.00 0.00 46.39 4.57
1167 1209 2.050985 GTGTGCGCCTTGTTCAGC 60.051 61.111 4.18 0.00 0.00 4.26
1193 1236 1.168407 TGGTTCTGCTCTGCTGCAAC 61.168 55.000 3.02 0.00 42.83 4.17
1204 1247 4.872691 GCTCTGCTGCAACTTTCTATTCTA 59.127 41.667 3.02 0.00 0.00 2.10
1205 1248 5.526846 GCTCTGCTGCAACTTTCTATTCTAT 59.473 40.000 3.02 0.00 0.00 1.98
1206 1249 6.511444 GCTCTGCTGCAACTTTCTATTCTATG 60.511 42.308 3.02 0.00 0.00 2.23
1207 1250 6.643388 TCTGCTGCAACTTTCTATTCTATGA 58.357 36.000 3.02 0.00 0.00 2.15
1213 1256 8.703604 TGCAACTTTCTATTCTATGACTACAC 57.296 34.615 0.00 0.00 0.00 2.90
1229 1345 5.753438 TGACTACACACATTCAGTCAGAAAC 59.247 40.000 0.00 0.00 41.76 2.78
1240 1356 4.380531 TCAGTCAGAAACCTGATTGACAC 58.619 43.478 14.02 0.00 46.00 3.67
1394 1510 0.972883 GTGGACAGGTGCTCTCTCTT 59.027 55.000 0.00 0.00 0.00 2.85
1395 1511 1.067213 GTGGACAGGTGCTCTCTCTTC 60.067 57.143 0.00 0.00 0.00 2.87
1399 1515 1.203112 ACAGGTGCTCTCTCTTCCTCA 60.203 52.381 0.00 0.00 0.00 3.86
1403 1519 2.166829 GTGCTCTCTCTTCCTCACTCA 58.833 52.381 0.00 0.00 0.00 3.41
1413 1542 3.960755 TCTTCCTCACTCACTGTCTGAAA 59.039 43.478 0.00 0.00 0.00 2.69
1415 1544 4.060038 TCCTCACTCACTGTCTGAAAAC 57.940 45.455 0.00 0.00 0.00 2.43
1416 1545 3.706594 TCCTCACTCACTGTCTGAAAACT 59.293 43.478 0.00 0.00 0.00 2.66
1419 1548 6.049149 CCTCACTCACTGTCTGAAAACTTTA 58.951 40.000 0.00 0.00 0.00 1.85
1420 1549 6.708054 CCTCACTCACTGTCTGAAAACTTTAT 59.292 38.462 0.00 0.00 0.00 1.40
1421 1550 7.872993 CCTCACTCACTGTCTGAAAACTTTATA 59.127 37.037 0.00 0.00 0.00 0.98
1423 1552 8.201464 TCACTCACTGTCTGAAAACTTTATACA 58.799 33.333 0.00 0.00 0.00 2.29
1424 1553 8.491152 CACTCACTGTCTGAAAACTTTATACAG 58.509 37.037 0.00 0.00 38.97 2.74
1425 1554 7.171678 ACTCACTGTCTGAAAACTTTATACAGC 59.828 37.037 0.00 0.00 37.06 4.40
1427 1556 6.204688 CACTGTCTGAAAACTTTATACAGCCA 59.795 38.462 0.00 0.00 37.06 4.75
1428 1557 6.428159 ACTGTCTGAAAACTTTATACAGCCAG 59.572 38.462 0.00 0.00 39.42 4.85
1429 1558 5.181245 TGTCTGAAAACTTTATACAGCCAGC 59.819 40.000 0.00 0.00 0.00 4.85
1430 1559 5.412904 GTCTGAAAACTTTATACAGCCAGCT 59.587 40.000 0.00 0.00 0.00 4.24
1448 1577 5.620879 GCCAGCTCCTTTTTCTTCAGTTATG 60.621 44.000 0.00 0.00 0.00 1.90
1452 1581 7.001073 AGCTCCTTTTTCTTCAGTTATGACTT 58.999 34.615 0.00 0.00 34.35 3.01
1453 1582 7.040823 AGCTCCTTTTTCTTCAGTTATGACTTG 60.041 37.037 0.00 0.00 34.35 3.16
1454 1583 7.255277 GCTCCTTTTTCTTCAGTTATGACTTGT 60.255 37.037 0.00 0.00 34.35 3.16
1455 1584 7.930217 TCCTTTTTCTTCAGTTATGACTTGTG 58.070 34.615 0.00 0.00 34.35 3.33
1456 1585 7.773224 TCCTTTTTCTTCAGTTATGACTTGTGA 59.227 33.333 0.00 0.00 34.35 3.58
1457 1586 7.857885 CCTTTTTCTTCAGTTATGACTTGTGAC 59.142 37.037 0.00 0.00 34.35 3.67
1459 1588 7.482654 TTTCTTCAGTTATGACTTGTGACTG 57.517 36.000 0.00 0.00 39.16 3.51
1460 1589 6.405278 TCTTCAGTTATGACTTGTGACTGA 57.595 37.500 0.74 0.74 43.40 3.41
1461 1590 6.450545 TCTTCAGTTATGACTTGTGACTGAG 58.549 40.000 4.90 1.49 45.04 3.35
1462 1591 5.139435 TCAGTTATGACTTGTGACTGAGG 57.861 43.478 0.74 0.00 41.09 3.86
1463 1592 4.832823 TCAGTTATGACTTGTGACTGAGGA 59.167 41.667 0.74 0.00 41.09 3.71
1464 1593 5.047731 TCAGTTATGACTTGTGACTGAGGAG 60.048 44.000 0.74 0.00 41.09 3.69
1465 1594 2.758736 ATGACTTGTGACTGAGGAGC 57.241 50.000 0.00 0.00 0.00 4.70
1466 1595 1.413118 TGACTTGTGACTGAGGAGCA 58.587 50.000 0.00 0.00 0.00 4.26
1467 1596 8.461898 AGTTATGACTTGTGACTGAGGAGCAG 62.462 46.154 0.00 0.00 41.09 4.24
1490 1619 5.755861 AGAGCAGTAGTTCTGAACTTTTGAC 59.244 40.000 26.33 18.18 46.27 3.18
1500 1629 2.224090 TGAACTTTTGACGGATGGACGA 60.224 45.455 0.00 0.00 37.61 4.20
1501 1630 2.536761 ACTTTTGACGGATGGACGAA 57.463 45.000 0.00 0.00 37.61 3.85
1505 1634 2.979814 TTGACGGATGGACGAATGAT 57.020 45.000 0.00 0.00 37.61 2.45
1683 1812 2.671963 GGAAAGGTGGTGTCCGGC 60.672 66.667 0.00 0.00 0.00 6.13
1684 1813 2.671963 GAAAGGTGGTGTCCGGCC 60.672 66.667 0.00 0.00 0.00 6.13
1685 1814 4.280019 AAAGGTGGTGTCCGGCCC 62.280 66.667 0.00 0.00 0.00 5.80
1708 1851 3.623510 GGTGCTGAACTAACTGGCTTATC 59.376 47.826 0.00 0.00 0.00 1.75
1775 1923 0.606604 GTTCAGCTTCTACGGGGACA 59.393 55.000 0.00 0.00 0.00 4.02
2053 2216 1.207390 CCGCCATTTTTGTGTGTGTG 58.793 50.000 0.00 0.00 0.00 3.82
2054 2217 1.470632 CCGCCATTTTTGTGTGTGTGT 60.471 47.619 0.00 0.00 0.00 3.72
2056 2219 2.670414 CGCCATTTTTGTGTGTGTGTTT 59.330 40.909 0.00 0.00 0.00 2.83
2057 2220 3.124297 CGCCATTTTTGTGTGTGTGTTTT 59.876 39.130 0.00 0.00 0.00 2.43
2117 2280 7.538334 GGAATGAAATTTGGTGCTAATTTTTGC 59.462 33.333 0.00 0.00 36.07 3.68
2121 2284 1.006314 TGGTGCTAATTTTTGCGCGC 61.006 50.000 27.26 27.26 39.67 6.86
2141 2304 2.410262 GCTTGTGTTTCTGACGTGATCG 60.410 50.000 0.00 0.00 43.34 3.69
2241 2404 0.105453 GGACTCTCCAGGCCCTCATA 60.105 60.000 0.00 0.00 43.28 2.15
2244 2407 1.047002 CTCTCCAGGCCCTCATACAG 58.953 60.000 0.00 0.00 0.00 2.74
2299 2472 6.681729 ATACCTGTCTCCAAAACTTGACTA 57.318 37.500 0.00 0.00 0.00 2.59
2320 2493 1.333619 GTTTGCGTGTGTTCTGGTGAT 59.666 47.619 0.00 0.00 0.00 3.06
2326 2499 4.570369 TGCGTGTGTTCTGGTGATATTATG 59.430 41.667 0.00 0.00 0.00 1.90
2337 2510 6.772233 TCTGGTGATATTATGACATGGTTTGG 59.228 38.462 0.00 0.00 0.00 3.28
2362 2535 0.815734 CTTGCAGCCATTTCCCTCTG 59.184 55.000 0.00 0.00 0.00 3.35
2459 2632 6.294342 CCGATTCGATAACTTCCAGGTATGTA 60.294 42.308 7.83 0.00 25.86 2.29
2508 2682 2.573369 AGAGGACATGCTCATTCATGC 58.427 47.619 3.08 0.00 45.75 4.06
2663 2847 2.202743 GCCAGTACGCTGCGATCA 60.203 61.111 30.47 10.34 41.26 2.92
2674 2858 2.279717 GCGATCATCAGCCAGCGA 60.280 61.111 0.00 0.00 0.00 4.93
2683 2867 1.123077 TCAGCCAGCGAATCAGGTAT 58.877 50.000 0.00 0.00 0.00 2.73
2684 2868 1.202568 TCAGCCAGCGAATCAGGTATG 60.203 52.381 0.00 0.00 0.00 2.39
2694 2878 3.484407 GAATCAGGTATGAGCCAGCAAT 58.516 45.455 0.00 0.00 39.29 3.56
2695 2879 2.336945 TCAGGTATGAGCCAGCAATG 57.663 50.000 0.00 0.00 0.00 2.82
2696 2880 1.561076 TCAGGTATGAGCCAGCAATGT 59.439 47.619 0.00 0.00 0.00 2.71
2708 2892 3.508762 CCAGCAATGTTCAGAGAAATGC 58.491 45.455 0.00 0.00 0.00 3.56
2728 2912 2.675348 GCTGTAGCACTGAAGGTTGATC 59.325 50.000 0.00 0.00 41.59 2.92
2750 2935 8.915036 TGATCTATTGGTCTAGAAGTTTACTCC 58.085 37.037 0.00 0.00 31.75 3.85
2845 3030 0.178767 CATCCTGAGCATCCGGTTCA 59.821 55.000 0.00 0.88 40.76 3.18
2954 3139 2.483876 TGCTTGTACACTTCAGAGCAC 58.516 47.619 12.49 0.00 35.43 4.40
2959 3144 2.698274 TGTACACTTCAGAGCACCTCAA 59.302 45.455 0.00 0.00 32.06 3.02
2982 3170 0.393537 CCAGCCCACATCTCCTGTTC 60.394 60.000 0.00 0.00 35.29 3.18
2997 3185 9.219603 CATCTCCTGTTCATTTGTACTCTTTTA 57.780 33.333 0.00 0.00 0.00 1.52
3031 3233 9.499479 CATATATCTTTATTGACAGAGTTGGCT 57.501 33.333 0.00 0.00 31.73 4.75
3039 3241 3.230976 TGACAGAGTTGGCTAGTCTTCA 58.769 45.455 3.44 8.49 34.18 3.02
3040 3242 3.834813 TGACAGAGTTGGCTAGTCTTCAT 59.165 43.478 3.44 0.00 34.18 2.57
3085 3287 3.508845 ATTTTGCCTGTGTAGTCCACT 57.491 42.857 0.00 0.00 44.81 4.00
3098 3300 5.182001 GTGTAGTCCACTTGAATCAGCAAAT 59.818 40.000 0.00 0.00 41.11 2.32
3154 3357 7.120726 AGGGTAAAGTGATATTTTGAAACGAGG 59.879 37.037 0.00 0.00 0.00 4.63
3156 3359 5.957842 AAGTGATATTTTGAAACGAGGCA 57.042 34.783 0.00 0.00 0.00 4.75
3227 3432 0.246910 TCTACAATTACACGCCGCCA 59.753 50.000 0.00 0.00 0.00 5.69
3281 3487 1.247567 AGCACGGACAAATTTCCCAG 58.752 50.000 6.87 3.15 31.03 4.45
3358 3567 2.325583 TGTCGAAACAAAGGAGCAGT 57.674 45.000 0.00 0.00 30.70 4.40
3742 3951 0.395312 GTTCCTTGTGGAGGGACGAA 59.605 55.000 0.00 0.00 44.18 3.85
3752 3961 1.363744 GAGGGACGAAATCTGTGCAG 58.636 55.000 0.00 0.00 0.00 4.41
3754 3963 1.079503 GGGACGAAATCTGTGCAGTC 58.920 55.000 0.00 0.00 0.00 3.51
3756 3965 1.728971 GGACGAAATCTGTGCAGTCAG 59.271 52.381 0.00 0.00 36.85 3.51
3763 3972 2.756840 TCTGTGCAGTCAGATGAAGG 57.243 50.000 3.01 0.00 39.20 3.46
3765 3974 2.369860 TCTGTGCAGTCAGATGAAGGTT 59.630 45.455 3.01 0.00 39.20 3.50
3766 3975 3.578282 TCTGTGCAGTCAGATGAAGGTTA 59.422 43.478 3.01 0.00 39.20 2.85
3767 3976 3.930336 TGTGCAGTCAGATGAAGGTTAG 58.070 45.455 0.00 0.00 0.00 2.34
3768 3977 3.324846 TGTGCAGTCAGATGAAGGTTAGT 59.675 43.478 0.00 0.00 0.00 2.24
3769 3978 4.202357 TGTGCAGTCAGATGAAGGTTAGTT 60.202 41.667 0.00 0.00 0.00 2.24
3774 3983 7.764443 TGCAGTCAGATGAAGGTTAGTTATAAC 59.236 37.037 7.57 7.57 40.56 1.89
3787 3996 9.032624 AGGTTAGTTATAACTCAGTTCAGCTTA 57.967 33.333 21.25 0.00 40.99 3.09
3793 4002 9.587772 GTTATAACTCAGTTCAGCTTATCAAGA 57.412 33.333 8.41 0.00 0.00 3.02
3797 4006 6.705302 ACTCAGTTCAGCTTATCAAGAATCA 58.295 36.000 0.00 0.00 0.00 2.57
3800 4009 6.596888 TCAGTTCAGCTTATCAAGAATCAAGG 59.403 38.462 0.00 0.00 0.00 3.61
3803 4012 5.678583 TCAGCTTATCAAGAATCAAGGAGG 58.321 41.667 0.00 0.00 0.00 4.30
3812 4021 3.618351 AGAATCAAGGAGGCTGTTGATG 58.382 45.455 17.97 0.53 41.53 3.07
3813 4022 3.265221 AGAATCAAGGAGGCTGTTGATGA 59.735 43.478 17.97 5.33 41.53 2.92
3829 4038 2.295070 TGATGACAACGAGAAAGGACGA 59.705 45.455 0.00 0.00 0.00 4.20
3830 4039 3.056821 TGATGACAACGAGAAAGGACGAT 60.057 43.478 0.00 0.00 0.00 3.73
3831 4040 3.380479 TGACAACGAGAAAGGACGATT 57.620 42.857 0.00 0.00 0.00 3.34
3832 4041 3.724374 TGACAACGAGAAAGGACGATTT 58.276 40.909 0.00 0.00 0.00 2.17
3833 4042 3.493129 TGACAACGAGAAAGGACGATTTG 59.507 43.478 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.105128 GAGATCGTGTGGCGGAGG 59.895 66.667 0.00 0.00 41.72 4.30
1 2 1.517257 GTGAGATCGTGTGGCGGAG 60.517 63.158 0.00 0.00 41.72 4.63
2 3 2.571757 GTGAGATCGTGTGGCGGA 59.428 61.111 0.00 0.00 41.72 5.54
3 4 2.509336 GGTGAGATCGTGTGGCGG 60.509 66.667 0.00 0.00 41.72 6.13
4 5 1.517257 GAGGTGAGATCGTGTGGCG 60.517 63.158 0.00 0.00 43.01 5.69
5 6 1.153549 GGAGGTGAGATCGTGTGGC 60.154 63.158 0.00 0.00 0.00 5.01
6 7 1.139734 CGGAGGTGAGATCGTGTGG 59.860 63.158 0.00 0.00 0.00 4.17
7 8 4.794164 CGGAGGTGAGATCGTGTG 57.206 61.111 0.00 0.00 0.00 3.82
61 62 4.821589 GTTCCTCCTCTGCGGCCG 62.822 72.222 24.05 24.05 0.00 6.13
62 63 4.475135 GGTTCCTCCTCTGCGGCC 62.475 72.222 0.00 0.00 0.00 6.13
63 64 4.821589 CGGTTCCTCCTCTGCGGC 62.822 72.222 0.00 0.00 0.00 6.53
64 65 4.821589 GCGGTTCCTCCTCTGCGG 62.822 72.222 0.00 0.00 0.00 5.69
67 68 4.821589 GGCGCGGTTCCTCCTCTG 62.822 72.222 8.83 0.00 0.00 3.35
72 73 4.778143 ATGTGGGCGCGGTTCCTC 62.778 66.667 8.83 0.00 0.00 3.71
73 74 4.344865 AATGTGGGCGCGGTTCCT 62.345 61.111 8.83 0.00 0.00 3.36
74 75 4.114997 CAATGTGGGCGCGGTTCC 62.115 66.667 8.83 0.00 0.00 3.62
75 76 3.361977 ACAATGTGGGCGCGGTTC 61.362 61.111 8.83 0.00 0.00 3.62
76 77 3.669344 CACAATGTGGGCGCGGTT 61.669 61.111 8.83 0.00 0.00 4.44
77 78 4.634703 TCACAATGTGGGCGCGGT 62.635 61.111 13.95 0.00 33.87 5.68
78 79 3.326889 CTTCACAATGTGGGCGCGG 62.327 63.158 13.95 0.00 33.87 6.46
79 80 1.851021 TTCTTCACAATGTGGGCGCG 61.851 55.000 13.95 0.00 33.87 6.86
80 81 0.109597 CTTCTTCACAATGTGGGCGC 60.110 55.000 13.95 0.00 33.87 6.53
81 82 1.069022 CACTTCTTCACAATGTGGGCG 60.069 52.381 13.95 2.62 33.87 6.13
82 83 1.270550 CCACTTCTTCACAATGTGGGC 59.729 52.381 13.95 0.00 43.01 5.36
83 84 1.270550 GCCACTTCTTCACAATGTGGG 59.729 52.381 13.95 5.91 45.79 4.61
85 86 2.606308 GCTGCCACTTCTTCACAATGTG 60.606 50.000 7.12 7.12 34.45 3.21
86 87 1.610522 GCTGCCACTTCTTCACAATGT 59.389 47.619 0.00 0.00 0.00 2.71
87 88 1.400629 CGCTGCCACTTCTTCACAATG 60.401 52.381 0.00 0.00 0.00 2.82
88 89 0.877071 CGCTGCCACTTCTTCACAAT 59.123 50.000 0.00 0.00 0.00 2.71
89 90 1.165907 CCGCTGCCACTTCTTCACAA 61.166 55.000 0.00 0.00 0.00 3.33
90 91 1.597854 CCGCTGCCACTTCTTCACA 60.598 57.895 0.00 0.00 0.00 3.58
91 92 1.294659 CTCCGCTGCCACTTCTTCAC 61.295 60.000 0.00 0.00 0.00 3.18
92 93 1.004560 CTCCGCTGCCACTTCTTCA 60.005 57.895 0.00 0.00 0.00 3.02
93 94 1.743252 CCTCCGCTGCCACTTCTTC 60.743 63.158 0.00 0.00 0.00 2.87
94 95 1.768684 TTCCTCCGCTGCCACTTCTT 61.769 55.000 0.00 0.00 0.00 2.52
95 96 2.177594 CTTCCTCCGCTGCCACTTCT 62.178 60.000 0.00 0.00 0.00 2.85
96 97 1.743252 CTTCCTCCGCTGCCACTTC 60.743 63.158 0.00 0.00 0.00 3.01
97 98 2.217038 TCTTCCTCCGCTGCCACTT 61.217 57.895 0.00 0.00 0.00 3.16
98 99 2.604686 TCTTCCTCCGCTGCCACT 60.605 61.111 0.00 0.00 0.00 4.00
99 100 2.435059 GTCTTCCTCCGCTGCCAC 60.435 66.667 0.00 0.00 0.00 5.01
100 101 4.069232 CGTCTTCCTCCGCTGCCA 62.069 66.667 0.00 0.00 0.00 4.92
109 110 4.117661 GAGGACGCGCGTCTTCCT 62.118 66.667 45.90 40.18 45.20 3.36
130 131 1.283181 CTACCCGATTCCGCTCTCG 59.717 63.158 0.00 0.00 34.73 4.04
131 132 0.311477 GACTACCCGATTCCGCTCTC 59.689 60.000 0.00 0.00 0.00 3.20
132 133 1.108132 GGACTACCCGATTCCGCTCT 61.108 60.000 0.00 0.00 0.00 4.09
133 134 1.363080 GGACTACCCGATTCCGCTC 59.637 63.158 0.00 0.00 0.00 5.03
134 135 3.534941 GGACTACCCGATTCCGCT 58.465 61.111 0.00 0.00 0.00 5.52
143 144 1.444672 GGCATGGTACGGACTACCC 59.555 63.158 0.00 0.00 44.30 3.69
144 145 1.444672 GGGCATGGTACGGACTACC 59.555 63.158 0.00 0.00 45.08 3.18
145 146 1.066918 CGGGCATGGTACGGACTAC 59.933 63.158 0.00 0.00 0.00 2.73
146 147 3.528853 CGGGCATGGTACGGACTA 58.471 61.111 0.00 0.00 0.00 2.59
151 152 2.202878 CAGTCCGGGCATGGTACG 60.203 66.667 9.71 0.00 0.00 3.67
152 153 2.513897 GCAGTCCGGGCATGGTAC 60.514 66.667 9.71 0.00 0.00 3.34
153 154 3.792736 GGCAGTCCGGGCATGGTA 61.793 66.667 9.71 0.00 0.00 3.25
159 160 4.966787 TTTGGTGGCAGTCCGGGC 62.967 66.667 0.00 0.00 34.14 6.13
160 161 2.672996 CTTTGGTGGCAGTCCGGG 60.673 66.667 0.00 0.00 34.14 5.73
161 162 2.672996 CCTTTGGTGGCAGTCCGG 60.673 66.667 0.00 0.00 34.14 5.14
162 163 1.672356 CTCCTTTGGTGGCAGTCCG 60.672 63.158 0.00 0.00 34.14 4.79
163 164 1.303643 CCTCCTTTGGTGGCAGTCC 60.304 63.158 0.00 0.00 29.27 3.85
164 165 0.322008 CTCCTCCTTTGGTGGCAGTC 60.322 60.000 0.00 0.00 36.40 3.51
165 166 0.768221 TCTCCTCCTTTGGTGGCAGT 60.768 55.000 0.00 0.00 36.40 4.40
166 167 0.401738 TTCTCCTCCTTTGGTGGCAG 59.598 55.000 0.00 0.57 36.40 4.85
167 168 0.401738 CTTCTCCTCCTTTGGTGGCA 59.598 55.000 0.19 0.00 36.40 4.92
168 169 0.322906 CCTTCTCCTCCTTTGGTGGC 60.323 60.000 0.19 0.00 36.40 5.01
169 170 1.280421 CTCCTTCTCCTCCTTTGGTGG 59.720 57.143 0.00 0.00 37.67 4.61
170 171 1.280421 CCTCCTTCTCCTCCTTTGGTG 59.720 57.143 0.00 0.00 0.00 4.17
171 172 1.152271 TCCTCCTTCTCCTCCTTTGGT 59.848 52.381 0.00 0.00 0.00 3.67
172 173 1.557371 GTCCTCCTTCTCCTCCTTTGG 59.443 57.143 0.00 0.00 0.00 3.28
173 174 2.260822 TGTCCTCCTTCTCCTCCTTTG 58.739 52.381 0.00 0.00 0.00 2.77
174 175 2.640332 GTTGTCCTCCTTCTCCTCCTTT 59.360 50.000 0.00 0.00 0.00 3.11
175 176 2.261729 GTTGTCCTCCTTCTCCTCCTT 58.738 52.381 0.00 0.00 0.00 3.36
176 177 1.150135 TGTTGTCCTCCTTCTCCTCCT 59.850 52.381 0.00 0.00 0.00 3.69
177 178 1.645710 TGTTGTCCTCCTTCTCCTCC 58.354 55.000 0.00 0.00 0.00 4.30
178 179 2.610727 CGTTGTTGTCCTCCTTCTCCTC 60.611 54.545 0.00 0.00 0.00 3.71
179 180 1.344763 CGTTGTTGTCCTCCTTCTCCT 59.655 52.381 0.00 0.00 0.00 3.69
180 181 1.608283 CCGTTGTTGTCCTCCTTCTCC 60.608 57.143 0.00 0.00 0.00 3.71
181 182 1.070289 ACCGTTGTTGTCCTCCTTCTC 59.930 52.381 0.00 0.00 0.00 2.87
182 183 1.129058 ACCGTTGTTGTCCTCCTTCT 58.871 50.000 0.00 0.00 0.00 2.85
183 184 1.202604 TCACCGTTGTTGTCCTCCTTC 60.203 52.381 0.00 0.00 0.00 3.46
184 185 0.834612 TCACCGTTGTTGTCCTCCTT 59.165 50.000 0.00 0.00 0.00 3.36
185 186 0.393077 CTCACCGTTGTTGTCCTCCT 59.607 55.000 0.00 0.00 0.00 3.69
186 187 0.602905 CCTCACCGTTGTTGTCCTCC 60.603 60.000 0.00 0.00 0.00 4.30
187 188 0.391597 TCCTCACCGTTGTTGTCCTC 59.608 55.000 0.00 0.00 0.00 3.71
188 189 0.106149 GTCCTCACCGTTGTTGTCCT 59.894 55.000 0.00 0.00 0.00 3.85
189 190 0.179067 TGTCCTCACCGTTGTTGTCC 60.179 55.000 0.00 0.00 0.00 4.02
190 191 1.217882 CTGTCCTCACCGTTGTTGTC 58.782 55.000 0.00 0.00 0.00 3.18
191 192 0.814010 GCTGTCCTCACCGTTGTTGT 60.814 55.000 0.00 0.00 0.00 3.32
192 193 0.532862 AGCTGTCCTCACCGTTGTTG 60.533 55.000 0.00 0.00 0.00 3.33
193 194 0.249911 GAGCTGTCCTCACCGTTGTT 60.250 55.000 0.00 0.00 40.45 2.83
194 195 1.367840 GAGCTGTCCTCACCGTTGT 59.632 57.895 0.00 0.00 40.45 3.32
195 196 1.374758 GGAGCTGTCCTCACCGTTG 60.375 63.158 0.00 0.00 42.62 4.10
196 197 2.932234 CGGAGCTGTCCTCACCGTT 61.932 63.158 0.00 0.00 42.62 4.44
197 198 3.374402 CGGAGCTGTCCTCACCGT 61.374 66.667 0.00 0.00 42.62 4.83
198 199 4.135153 CCGGAGCTGTCCTCACCG 62.135 72.222 0.00 0.00 42.62 4.94
199 200 4.459089 GCCGGAGCTGTCCTCACC 62.459 72.222 5.05 0.00 42.62 4.02
209 210 0.389166 CAATAGGATCGAGCCGGAGC 60.389 60.000 15.18 0.00 40.32 4.70
210 211 0.389166 GCAATAGGATCGAGCCGGAG 60.389 60.000 15.18 7.08 0.00 4.63
211 212 1.666011 GCAATAGGATCGAGCCGGA 59.334 57.895 15.18 6.97 0.00 5.14
212 213 1.734477 CGCAATAGGATCGAGCCGG 60.734 63.158 15.18 6.71 0.00 6.13
213 214 2.375766 GCGCAATAGGATCGAGCCG 61.376 63.158 15.18 1.87 0.00 5.52
214 215 2.029844 GGCGCAATAGGATCGAGCC 61.030 63.158 13.00 13.00 36.08 4.70
215 216 0.601311 AAGGCGCAATAGGATCGAGC 60.601 55.000 10.83 0.00 0.00 5.03
216 217 1.423395 GAAGGCGCAATAGGATCGAG 58.577 55.000 10.83 0.00 0.00 4.04
217 218 0.318699 CGAAGGCGCAATAGGATCGA 60.319 55.000 10.83 0.00 0.00 3.59
218 219 0.318699 TCGAAGGCGCAATAGGATCG 60.319 55.000 10.83 7.97 37.46 3.69
219 220 1.140816 GTCGAAGGCGCAATAGGATC 58.859 55.000 10.83 0.00 37.46 3.36
220 221 0.249911 GGTCGAAGGCGCAATAGGAT 60.250 55.000 10.83 0.00 37.46 3.24
221 222 1.143183 GGTCGAAGGCGCAATAGGA 59.857 57.895 10.83 0.00 37.46 2.94
222 223 2.237751 CGGTCGAAGGCGCAATAGG 61.238 63.158 10.83 0.00 37.46 2.57
223 224 2.237751 CCGGTCGAAGGCGCAATAG 61.238 63.158 10.83 0.00 37.46 1.73
224 225 1.665264 TACCGGTCGAAGGCGCAATA 61.665 55.000 12.40 0.00 37.46 1.90
225 226 2.901051 CTACCGGTCGAAGGCGCAAT 62.901 60.000 12.40 0.00 37.46 3.56
226 227 3.636313 CTACCGGTCGAAGGCGCAA 62.636 63.158 12.40 0.00 37.46 4.85
227 228 4.124351 CTACCGGTCGAAGGCGCA 62.124 66.667 12.40 0.00 37.46 6.09
228 229 3.637926 AACTACCGGTCGAAGGCGC 62.638 63.158 12.40 0.00 37.46 6.53
229 230 1.515736 GAACTACCGGTCGAAGGCG 60.516 63.158 12.40 3.05 39.35 5.52
230 231 1.153686 GGAACTACCGGTCGAAGGC 60.154 63.158 12.40 0.00 0.00 4.35
231 232 0.108945 GTGGAACTACCGGTCGAAGG 60.109 60.000 12.40 6.64 42.61 3.46
232 233 0.455633 CGTGGAACTACCGGTCGAAG 60.456 60.000 12.40 5.66 42.61 3.79
233 234 0.888736 TCGTGGAACTACCGGTCGAA 60.889 55.000 12.40 0.00 42.61 3.71
234 235 1.300971 CTCGTGGAACTACCGGTCGA 61.301 60.000 12.40 11.64 42.61 4.20
235 236 1.136147 CTCGTGGAACTACCGGTCG 59.864 63.158 12.40 7.75 42.61 4.79
236 237 0.883833 TTCTCGTGGAACTACCGGTC 59.116 55.000 12.40 0.00 42.61 4.79
237 238 0.886563 CTTCTCGTGGAACTACCGGT 59.113 55.000 13.98 13.98 42.61 5.28
238 239 0.172803 CCTTCTCGTGGAACTACCGG 59.827 60.000 0.00 0.00 42.61 5.28
239 240 1.135460 GTCCTTCTCGTGGAACTACCG 60.135 57.143 0.00 0.00 42.61 4.02
240 241 1.135460 CGTCCTTCTCGTGGAACTACC 60.135 57.143 0.00 0.00 35.10 3.18
241 242 1.808945 TCGTCCTTCTCGTGGAACTAC 59.191 52.381 0.00 0.00 35.10 2.73
242 243 1.808945 GTCGTCCTTCTCGTGGAACTA 59.191 52.381 0.00 0.00 35.10 2.24
243 244 0.597072 GTCGTCCTTCTCGTGGAACT 59.403 55.000 0.00 0.00 35.10 3.01
244 245 0.313043 TGTCGTCCTTCTCGTGGAAC 59.687 55.000 0.00 0.00 35.10 3.62
245 246 1.034356 TTGTCGTCCTTCTCGTGGAA 58.966 50.000 0.00 0.00 35.10 3.53
246 247 1.067846 CATTGTCGTCCTTCTCGTGGA 60.068 52.381 0.00 0.00 0.00 4.02
247 248 1.350193 CATTGTCGTCCTTCTCGTGG 58.650 55.000 0.00 0.00 0.00 4.94
248 249 1.350193 CCATTGTCGTCCTTCTCGTG 58.650 55.000 0.00 0.00 0.00 4.35
249 250 0.389948 GCCATTGTCGTCCTTCTCGT 60.390 55.000 0.00 0.00 0.00 4.18
250 251 1.413767 CGCCATTGTCGTCCTTCTCG 61.414 60.000 0.00 0.00 0.00 4.04
251 252 1.696832 GCGCCATTGTCGTCCTTCTC 61.697 60.000 0.00 0.00 0.00 2.87
252 253 1.741770 GCGCCATTGTCGTCCTTCT 60.742 57.895 0.00 0.00 0.00 2.85
253 254 2.750888 GGCGCCATTGTCGTCCTTC 61.751 63.158 24.80 0.00 0.00 3.46
254 255 2.746277 GGCGCCATTGTCGTCCTT 60.746 61.111 24.80 0.00 0.00 3.36
257 258 4.147322 CACGGCGCCATTGTCGTC 62.147 66.667 28.98 0.00 33.31 4.20
258 259 4.673298 TCACGGCGCCATTGTCGT 62.673 61.111 28.98 14.66 36.19 4.34
259 260 3.367051 CTTCACGGCGCCATTGTCG 62.367 63.158 28.98 13.91 0.00 4.35
260 261 2.480555 CTTCACGGCGCCATTGTC 59.519 61.111 28.98 0.00 0.00 3.18
261 262 3.055719 CCTTCACGGCGCCATTGT 61.056 61.111 28.98 14.07 0.00 2.71
262 263 3.814268 CCCTTCACGGCGCCATTG 61.814 66.667 28.98 22.49 0.00 2.82
270 271 1.672356 CTGACCTTGCCCTTCACGG 60.672 63.158 0.00 0.00 39.79 4.94
271 272 2.328099 GCTGACCTTGCCCTTCACG 61.328 63.158 0.00 0.00 0.00 4.35
272 273 1.973812 GGCTGACCTTGCCCTTCAC 60.974 63.158 0.00 0.00 44.32 3.18
273 274 2.436109 GGCTGACCTTGCCCTTCA 59.564 61.111 0.00 0.00 44.32 3.02
279 280 4.115199 ATCCCCGGCTGACCTTGC 62.115 66.667 0.00 0.00 0.00 4.01
280 281 1.987807 ATCATCCCCGGCTGACCTTG 61.988 60.000 0.00 0.00 0.00 3.61
281 282 1.694169 ATCATCCCCGGCTGACCTT 60.694 57.895 0.00 0.00 0.00 3.50
282 283 2.040464 ATCATCCCCGGCTGACCT 60.040 61.111 0.00 0.00 0.00 3.85
283 284 1.700042 AAGATCATCCCCGGCTGACC 61.700 60.000 0.00 0.00 0.00 4.02
284 285 0.533755 CAAGATCATCCCCGGCTGAC 60.534 60.000 0.00 0.00 0.00 3.51
285 286 0.982852 ACAAGATCATCCCCGGCTGA 60.983 55.000 0.00 0.00 0.00 4.26
286 287 0.533755 GACAAGATCATCCCCGGCTG 60.534 60.000 0.00 0.00 0.00 4.85
287 288 1.700042 GGACAAGATCATCCCCGGCT 61.700 60.000 0.00 0.00 0.00 5.52
288 289 1.227973 GGACAAGATCATCCCCGGC 60.228 63.158 0.00 0.00 0.00 6.13
289 290 0.179045 GTGGACAAGATCATCCCCGG 60.179 60.000 0.00 0.00 33.69 5.73
290 291 0.179045 GGTGGACAAGATCATCCCCG 60.179 60.000 7.90 0.00 33.69 5.73
291 292 0.918983 TGGTGGACAAGATCATCCCC 59.081 55.000 7.90 8.77 33.69 4.81
292 293 3.808618 GCTATGGTGGACAAGATCATCCC 60.809 52.174 7.90 0.00 33.69 3.85
293 294 3.406764 GCTATGGTGGACAAGATCATCC 58.593 50.000 0.00 0.00 35.37 3.51
294 295 3.181451 TGGCTATGGTGGACAAGATCATC 60.181 47.826 0.00 0.00 0.00 2.92
295 296 2.779430 TGGCTATGGTGGACAAGATCAT 59.221 45.455 0.00 0.00 0.00 2.45
296 297 2.195727 TGGCTATGGTGGACAAGATCA 58.804 47.619 0.00 0.00 0.00 2.92
297 298 3.281727 TTGGCTATGGTGGACAAGATC 57.718 47.619 0.00 0.00 0.00 2.75
298 299 3.245229 TGTTTGGCTATGGTGGACAAGAT 60.245 43.478 0.00 0.00 0.00 2.40
299 300 2.107378 TGTTTGGCTATGGTGGACAAGA 59.893 45.455 0.00 0.00 0.00 3.02
300 301 2.513753 TGTTTGGCTATGGTGGACAAG 58.486 47.619 0.00 0.00 0.00 3.16
301 302 2.666272 TGTTTGGCTATGGTGGACAA 57.334 45.000 0.00 0.00 0.00 3.18
302 303 2.445427 CATGTTTGGCTATGGTGGACA 58.555 47.619 0.00 0.00 0.00 4.02
303 304 1.134946 GCATGTTTGGCTATGGTGGAC 59.865 52.381 0.00 0.00 0.00 4.02
304 305 1.473258 GCATGTTTGGCTATGGTGGA 58.527 50.000 0.00 0.00 0.00 4.02
305 306 0.461135 GGCATGTTTGGCTATGGTGG 59.539 55.000 0.00 0.00 44.68 4.61
314 315 6.092533 GGACTATCAATTTTTGGCATGTTTGG 59.907 38.462 0.00 0.00 0.00 3.28
315 316 6.183360 CGGACTATCAATTTTTGGCATGTTTG 60.183 38.462 0.00 0.00 0.00 2.93
316 317 5.868801 CGGACTATCAATTTTTGGCATGTTT 59.131 36.000 0.00 0.00 0.00 2.83
317 318 5.410067 CGGACTATCAATTTTTGGCATGTT 58.590 37.500 0.00 0.00 0.00 2.71
318 319 4.142182 CCGGACTATCAATTTTTGGCATGT 60.142 41.667 0.00 0.00 0.00 3.21
319 320 4.142182 ACCGGACTATCAATTTTTGGCATG 60.142 41.667 9.46 0.00 0.00 4.06
320 321 4.023291 ACCGGACTATCAATTTTTGGCAT 58.977 39.130 9.46 0.00 0.00 4.40
321 322 3.192422 CACCGGACTATCAATTTTTGGCA 59.808 43.478 9.46 0.00 0.00 4.92
322 323 3.428862 CCACCGGACTATCAATTTTTGGC 60.429 47.826 9.46 0.00 0.00 4.52
323 324 3.428862 GCCACCGGACTATCAATTTTTGG 60.429 47.826 9.46 0.51 0.00 3.28
324 325 3.192422 TGCCACCGGACTATCAATTTTTG 59.808 43.478 9.46 0.00 0.00 2.44
325 326 3.426615 TGCCACCGGACTATCAATTTTT 58.573 40.909 9.46 0.00 0.00 1.94
326 327 3.080300 TGCCACCGGACTATCAATTTT 57.920 42.857 9.46 0.00 0.00 1.82
327 328 2.799126 TGCCACCGGACTATCAATTT 57.201 45.000 9.46 0.00 0.00 1.82
328 329 2.092429 ACATGCCACCGGACTATCAATT 60.092 45.455 9.46 0.00 0.00 2.32
329 330 1.490490 ACATGCCACCGGACTATCAAT 59.510 47.619 9.46 0.00 0.00 2.57
330 331 0.908910 ACATGCCACCGGACTATCAA 59.091 50.000 9.46 0.00 0.00 2.57
331 332 0.177836 CACATGCCACCGGACTATCA 59.822 55.000 9.46 0.00 0.00 2.15
332 333 0.532862 CCACATGCCACCGGACTATC 60.533 60.000 9.46 0.00 0.00 2.08
333 334 1.526887 CCACATGCCACCGGACTAT 59.473 57.895 9.46 0.00 0.00 2.12
334 335 2.986290 CCACATGCCACCGGACTA 59.014 61.111 9.46 0.00 0.00 2.59
335 336 4.722700 GCCACATGCCACCGGACT 62.723 66.667 9.46 0.00 0.00 3.85
337 338 3.582242 ATTGCCACATGCCACCGGA 62.582 57.895 9.46 0.00 40.16 5.14
338 339 3.069946 ATTGCCACATGCCACCGG 61.070 61.111 0.00 0.00 40.16 5.28
339 340 1.311651 TACATTGCCACATGCCACCG 61.312 55.000 0.00 0.00 40.16 4.94
340 341 0.457035 CTACATTGCCACATGCCACC 59.543 55.000 0.00 0.00 40.16 4.61
341 342 1.176527 ACTACATTGCCACATGCCAC 58.823 50.000 0.00 0.00 40.16 5.01
342 343 2.026356 ACTACTACATTGCCACATGCCA 60.026 45.455 0.00 0.00 40.16 4.92
343 344 2.614057 GACTACTACATTGCCACATGCC 59.386 50.000 0.00 0.00 40.16 4.40
344 345 3.270027 TGACTACTACATTGCCACATGC 58.730 45.455 0.00 0.00 41.77 4.06
345 346 4.568359 GTCTGACTACTACATTGCCACATG 59.432 45.833 0.00 0.00 0.00 3.21
346 347 4.678044 CGTCTGACTACTACATTGCCACAT 60.678 45.833 6.21 0.00 0.00 3.21
347 348 3.366985 CGTCTGACTACTACATTGCCACA 60.367 47.826 6.21 0.00 0.00 4.17
348 349 3.119602 TCGTCTGACTACTACATTGCCAC 60.120 47.826 6.21 0.00 0.00 5.01
349 350 3.086282 TCGTCTGACTACTACATTGCCA 58.914 45.455 6.21 0.00 0.00 4.92
350 351 3.777465 TCGTCTGACTACTACATTGCC 57.223 47.619 6.21 0.00 0.00 4.52
351 352 4.500837 CACATCGTCTGACTACTACATTGC 59.499 45.833 6.21 0.00 0.00 3.56
352 353 5.641709 ACACATCGTCTGACTACTACATTG 58.358 41.667 6.21 0.00 0.00 2.82
353 354 5.899120 ACACATCGTCTGACTACTACATT 57.101 39.130 6.21 0.00 0.00 2.71
354 355 6.997239 TTACACATCGTCTGACTACTACAT 57.003 37.500 6.21 0.00 0.00 2.29
355 356 6.806388 TTTACACATCGTCTGACTACTACA 57.194 37.500 6.21 0.00 0.00 2.74
356 357 6.196724 GCATTTACACATCGTCTGACTACTAC 59.803 42.308 6.21 0.00 0.00 2.73
357 358 6.127842 TGCATTTACACATCGTCTGACTACTA 60.128 38.462 6.21 0.00 0.00 1.82
358 359 5.103000 GCATTTACACATCGTCTGACTACT 58.897 41.667 6.21 0.00 0.00 2.57
359 360 4.862574 TGCATTTACACATCGTCTGACTAC 59.137 41.667 6.21 0.00 0.00 2.73
360 361 5.066968 TGCATTTACACATCGTCTGACTA 57.933 39.130 6.21 0.00 0.00 2.59
361 362 3.925379 TGCATTTACACATCGTCTGACT 58.075 40.909 6.21 0.00 0.00 3.41
362 363 4.826500 GATGCATTTACACATCGTCTGAC 58.173 43.478 0.00 0.00 33.91 3.51
369 370 5.556470 ACGTAAACGATGCATTTACACATC 58.444 37.500 17.28 0.00 40.88 3.06
370 371 5.539582 ACGTAAACGATGCATTTACACAT 57.460 34.783 17.28 4.15 40.88 3.21
371 372 4.994220 ACGTAAACGATGCATTTACACA 57.006 36.364 17.28 0.00 40.88 3.72
372 373 6.086319 ACTACGTAAACGATGCATTTACAC 57.914 37.500 17.28 5.99 40.88 2.90
373 374 6.527089 CAACTACGTAAACGATGCATTTACA 58.473 36.000 17.28 3.10 40.88 2.41
374 375 5.446899 GCAACTACGTAAACGATGCATTTAC 59.553 40.000 9.86 6.01 43.02 2.01
375 376 5.120363 TGCAACTACGTAAACGATGCATTTA 59.880 36.000 18.25 0.00 43.02 1.40
376 377 4.083749 TGCAACTACGTAAACGATGCATTT 60.084 37.500 18.25 0.00 43.02 2.32
377 378 3.433957 TGCAACTACGTAAACGATGCATT 59.566 39.130 18.25 0.00 43.02 3.56
378 379 2.997303 TGCAACTACGTAAACGATGCAT 59.003 40.909 18.25 0.00 43.02 3.96
379 380 2.405172 TGCAACTACGTAAACGATGCA 58.595 42.857 18.25 18.25 43.02 3.96
380 381 3.061563 TCATGCAACTACGTAAACGATGC 59.938 43.478 9.86 13.21 43.02 3.91
381 382 4.326278 ACTCATGCAACTACGTAAACGATG 59.674 41.667 9.86 3.99 43.02 3.84
382 383 4.491676 ACTCATGCAACTACGTAAACGAT 58.508 39.130 9.86 0.00 43.02 3.73
383 384 3.904571 ACTCATGCAACTACGTAAACGA 58.095 40.909 9.86 0.00 43.02 3.85
384 385 4.640805 AACTCATGCAACTACGTAAACG 57.359 40.909 0.04 0.04 46.33 3.60
385 386 5.744490 ACAAACTCATGCAACTACGTAAAC 58.256 37.500 0.00 0.00 0.00 2.01
386 387 5.994887 ACAAACTCATGCAACTACGTAAA 57.005 34.783 0.00 0.00 0.00 2.01
387 388 6.091577 CCATACAAACTCATGCAACTACGTAA 59.908 38.462 0.00 0.00 0.00 3.18
388 389 5.579119 CCATACAAACTCATGCAACTACGTA 59.421 40.000 0.00 0.00 0.00 3.57
389 390 4.391830 CCATACAAACTCATGCAACTACGT 59.608 41.667 0.00 0.00 0.00 3.57
390 391 4.629634 TCCATACAAACTCATGCAACTACG 59.370 41.667 0.00 0.00 0.00 3.51
391 392 6.683974 ATCCATACAAACTCATGCAACTAC 57.316 37.500 0.00 0.00 0.00 2.73
392 393 7.392953 TCAAATCCATACAAACTCATGCAACTA 59.607 33.333 0.00 0.00 0.00 2.24
393 394 6.209192 TCAAATCCATACAAACTCATGCAACT 59.791 34.615 0.00 0.00 0.00 3.16
394 395 6.389091 TCAAATCCATACAAACTCATGCAAC 58.611 36.000 0.00 0.00 0.00 4.17
395 396 6.350361 CCTCAAATCCATACAAACTCATGCAA 60.350 38.462 0.00 0.00 0.00 4.08
396 397 5.125900 CCTCAAATCCATACAAACTCATGCA 59.874 40.000 0.00 0.00 0.00 3.96
397 398 5.126061 ACCTCAAATCCATACAAACTCATGC 59.874 40.000 0.00 0.00 0.00 4.06
398 399 6.764308 ACCTCAAATCCATACAAACTCATG 57.236 37.500 0.00 0.00 0.00 3.07
399 400 7.013655 GCATACCTCAAATCCATACAAACTCAT 59.986 37.037 0.00 0.00 0.00 2.90
400 401 6.318648 GCATACCTCAAATCCATACAAACTCA 59.681 38.462 0.00 0.00 0.00 3.41
401 402 6.543831 AGCATACCTCAAATCCATACAAACTC 59.456 38.462 0.00 0.00 0.00 3.01
402 403 6.426587 AGCATACCTCAAATCCATACAAACT 58.573 36.000 0.00 0.00 0.00 2.66
403 404 6.699575 AGCATACCTCAAATCCATACAAAC 57.300 37.500 0.00 0.00 0.00 2.93
404 405 8.995027 ATTAGCATACCTCAAATCCATACAAA 57.005 30.769 0.00 0.00 0.00 2.83
405 406 8.849168 CAATTAGCATACCTCAAATCCATACAA 58.151 33.333 0.00 0.00 0.00 2.41
406 407 8.217111 TCAATTAGCATACCTCAAATCCATACA 58.783 33.333 0.00 0.00 0.00 2.29
407 408 8.621532 TCAATTAGCATACCTCAAATCCATAC 57.378 34.615 0.00 0.00 0.00 2.39
408 409 8.439971 ACTCAATTAGCATACCTCAAATCCATA 58.560 33.333 0.00 0.00 0.00 2.74
409 410 7.293073 ACTCAATTAGCATACCTCAAATCCAT 58.707 34.615 0.00 0.00 0.00 3.41
410 411 6.662755 ACTCAATTAGCATACCTCAAATCCA 58.337 36.000 0.00 0.00 0.00 3.41
411 412 6.073548 CGACTCAATTAGCATACCTCAAATCC 60.074 42.308 0.00 0.00 0.00 3.01
412 413 6.701841 TCGACTCAATTAGCATACCTCAAATC 59.298 38.462 0.00 0.00 0.00 2.17
413 414 6.480320 GTCGACTCAATTAGCATACCTCAAAT 59.520 38.462 8.70 0.00 0.00 2.32
414 415 5.810587 GTCGACTCAATTAGCATACCTCAAA 59.189 40.000 8.70 0.00 0.00 2.69
415 416 5.348986 GTCGACTCAATTAGCATACCTCAA 58.651 41.667 8.70 0.00 0.00 3.02
416 417 4.202121 GGTCGACTCAATTAGCATACCTCA 60.202 45.833 16.46 0.00 0.00 3.86
417 418 4.299978 GGTCGACTCAATTAGCATACCTC 58.700 47.826 16.46 0.00 0.00 3.85
418 419 3.243434 CGGTCGACTCAATTAGCATACCT 60.243 47.826 16.46 0.00 0.00 3.08
419 420 3.050619 CGGTCGACTCAATTAGCATACC 58.949 50.000 16.46 0.00 0.00 2.73
420 421 3.050619 CCGGTCGACTCAATTAGCATAC 58.949 50.000 16.46 0.00 0.00 2.39
421 422 2.691526 ACCGGTCGACTCAATTAGCATA 59.308 45.455 16.46 0.00 0.00 3.14
422 423 1.480954 ACCGGTCGACTCAATTAGCAT 59.519 47.619 16.46 0.00 0.00 3.79
423 424 0.892755 ACCGGTCGACTCAATTAGCA 59.107 50.000 16.46 0.00 0.00 3.49
424 425 1.659098 CAACCGGTCGACTCAATTAGC 59.341 52.381 16.46 0.00 0.00 3.09
425 426 1.659098 GCAACCGGTCGACTCAATTAG 59.341 52.381 16.46 1.37 0.00 1.73
426 427 1.717194 GCAACCGGTCGACTCAATTA 58.283 50.000 16.46 0.00 0.00 1.40
427 428 1.289109 CGCAACCGGTCGACTCAATT 61.289 55.000 16.46 2.41 0.00 2.32
428 429 1.736645 CGCAACCGGTCGACTCAAT 60.737 57.895 16.46 0.00 0.00 2.57
429 430 2.355363 CGCAACCGGTCGACTCAA 60.355 61.111 16.46 0.00 0.00 3.02
430 431 3.263503 CTCGCAACCGGTCGACTCA 62.264 63.158 16.46 0.00 34.56 3.41
431 432 2.467946 TTCTCGCAACCGGTCGACTC 62.468 60.000 16.46 4.72 34.56 3.36
432 433 2.473664 CTTCTCGCAACCGGTCGACT 62.474 60.000 16.46 0.00 34.56 4.18
433 434 2.049802 TTCTCGCAACCGGTCGAC 60.050 61.111 8.04 7.13 34.56 4.20
434 435 2.257371 CTTCTCGCAACCGGTCGA 59.743 61.111 16.50 16.50 34.56 4.20
435 436 2.758770 TTCCTTCTCGCAACCGGTCG 62.759 60.000 8.04 8.80 34.56 4.79
436 437 0.601841 TTTCCTTCTCGCAACCGGTC 60.602 55.000 8.04 0.00 34.56 4.79
437 438 0.179040 TTTTCCTTCTCGCAACCGGT 60.179 50.000 0.00 0.00 34.56 5.28
438 439 1.165270 ATTTTCCTTCTCGCAACCGG 58.835 50.000 0.00 0.00 34.56 5.28
439 440 2.989422 AATTTTCCTTCTCGCAACCG 57.011 45.000 0.00 0.00 0.00 4.44
440 441 5.062183 GCATAAAATTTTCCTTCTCGCAACC 59.938 40.000 6.72 0.00 0.00 3.77
441 442 5.863935 AGCATAAAATTTTCCTTCTCGCAAC 59.136 36.000 6.72 0.00 0.00 4.17
442 443 6.024552 AGCATAAAATTTTCCTTCTCGCAA 57.975 33.333 6.72 0.00 0.00 4.85
443 444 5.643379 AGCATAAAATTTTCCTTCTCGCA 57.357 34.783 6.72 0.00 0.00 5.10
444 445 6.033937 GTCAAGCATAAAATTTTCCTTCTCGC 59.966 38.462 6.72 1.51 0.00 5.03
445 446 6.528072 GGTCAAGCATAAAATTTTCCTTCTCG 59.472 38.462 6.72 0.00 0.00 4.04
446 447 7.543520 CAGGTCAAGCATAAAATTTTCCTTCTC 59.456 37.037 6.72 4.68 0.00 2.87
447 448 7.015584 ACAGGTCAAGCATAAAATTTTCCTTCT 59.984 33.333 6.72 0.00 0.00 2.85
448 449 7.116805 CACAGGTCAAGCATAAAATTTTCCTTC 59.883 37.037 6.72 0.00 0.00 3.46
449 450 6.930722 CACAGGTCAAGCATAAAATTTTCCTT 59.069 34.615 6.72 6.20 0.00 3.36
450 451 6.267471 TCACAGGTCAAGCATAAAATTTTCCT 59.733 34.615 6.72 2.28 0.00 3.36
451 452 6.454795 TCACAGGTCAAGCATAAAATTTTCC 58.545 36.000 6.72 0.00 0.00 3.13
452 453 6.089954 GCTCACAGGTCAAGCATAAAATTTTC 59.910 38.462 6.72 0.00 36.06 2.29
453 454 5.928264 GCTCACAGGTCAAGCATAAAATTTT 59.072 36.000 8.75 8.75 36.06 1.82
454 455 5.473039 GCTCACAGGTCAAGCATAAAATTT 58.527 37.500 0.00 0.00 36.06 1.82
455 456 4.379813 CGCTCACAGGTCAAGCATAAAATT 60.380 41.667 0.00 0.00 35.76 1.82
456 457 3.127548 CGCTCACAGGTCAAGCATAAAAT 59.872 43.478 0.00 0.00 35.76 1.82
457 458 2.483877 CGCTCACAGGTCAAGCATAAAA 59.516 45.455 0.00 0.00 35.76 1.52
458 459 2.076100 CGCTCACAGGTCAAGCATAAA 58.924 47.619 0.00 0.00 35.76 1.40
459 460 1.001974 ACGCTCACAGGTCAAGCATAA 59.998 47.619 0.00 0.00 35.76 1.90
460 461 0.608130 ACGCTCACAGGTCAAGCATA 59.392 50.000 0.00 0.00 35.76 3.14
461 462 0.671781 GACGCTCACAGGTCAAGCAT 60.672 55.000 0.00 0.00 35.76 3.79
462 463 1.300931 GACGCTCACAGGTCAAGCA 60.301 57.895 0.00 0.00 35.76 3.91
463 464 2.029844 GGACGCTCACAGGTCAAGC 61.030 63.158 0.00 0.00 34.87 4.01
464 465 1.734477 CGGACGCTCACAGGTCAAG 60.734 63.158 0.00 0.00 34.87 3.02
465 466 2.338620 CGGACGCTCACAGGTCAA 59.661 61.111 0.00 0.00 34.87 3.18
466 467 4.357947 GCGGACGCTCACAGGTCA 62.358 66.667 9.76 0.00 38.26 4.02
477 478 3.845472 CTTAAACGCCCGCGGACG 61.845 66.667 32.50 32.50 44.69 4.79
478 479 3.493440 CCTTAAACGCCCGCGGAC 61.493 66.667 30.73 16.23 44.69 4.79
479 480 4.763646 CCCTTAAACGCCCGCGGA 62.764 66.667 30.73 0.90 44.69 5.54
482 483 3.129502 GACCCCTTAAACGCCCGC 61.130 66.667 0.00 0.00 0.00 6.13
483 484 2.816520 CGACCCCTTAAACGCCCG 60.817 66.667 0.00 0.00 0.00 6.13
484 485 2.261430 ATCCGACCCCTTAAACGCCC 62.261 60.000 0.00 0.00 0.00 6.13
485 486 0.393402 AATCCGACCCCTTAAACGCC 60.393 55.000 0.00 0.00 0.00 5.68
486 487 1.131693 CAAATCCGACCCCTTAAACGC 59.868 52.381 0.00 0.00 0.00 4.84
487 488 1.741145 CCAAATCCGACCCCTTAAACG 59.259 52.381 0.00 0.00 0.00 3.60
488 489 2.097036 CCCAAATCCGACCCCTTAAAC 58.903 52.381 0.00 0.00 0.00 2.01
489 490 1.006162 CCCCAAATCCGACCCCTTAAA 59.994 52.381 0.00 0.00 0.00 1.52
490 491 0.626916 CCCCAAATCCGACCCCTTAA 59.373 55.000 0.00 0.00 0.00 1.85
491 492 1.928714 GCCCCAAATCCGACCCCTTA 61.929 60.000 0.00 0.00 0.00 2.69
492 493 3.096357 CCCCAAATCCGACCCCTT 58.904 61.111 0.00 0.00 0.00 3.95
493 494 3.739613 GCCCCAAATCCGACCCCT 61.740 66.667 0.00 0.00 0.00 4.79
495 496 4.419921 ACGCCCCAAATCCGACCC 62.420 66.667 0.00 0.00 0.00 4.46
496 497 2.822701 GACGCCCCAAATCCGACC 60.823 66.667 0.00 0.00 0.00 4.79
497 498 2.822701 GGACGCCCCAAATCCGAC 60.823 66.667 0.00 0.00 34.14 4.79
501 502 4.419921 ACCCGGACGCCCCAAATC 62.420 66.667 0.73 0.00 34.14 2.17
502 503 4.733542 CACCCGGACGCCCCAAAT 62.734 66.667 0.73 0.00 34.14 2.32
507 508 3.152400 ATCTACACCCGGACGCCC 61.152 66.667 0.73 0.00 0.00 6.13
508 509 2.106332 CATCTACACCCGGACGCC 59.894 66.667 0.73 0.00 0.00 5.68
509 510 2.106332 CCATCTACACCCGGACGC 59.894 66.667 0.73 0.00 0.00 5.19
510 511 1.035932 AGACCATCTACACCCGGACG 61.036 60.000 0.73 0.00 0.00 4.79
511 512 0.460311 CAGACCATCTACACCCGGAC 59.540 60.000 0.73 0.00 0.00 4.79
512 513 0.333652 TCAGACCATCTACACCCGGA 59.666 55.000 0.73 0.00 0.00 5.14
513 514 0.747255 CTCAGACCATCTACACCCGG 59.253 60.000 0.00 0.00 0.00 5.73
514 515 0.747255 CCTCAGACCATCTACACCCG 59.253 60.000 0.00 0.00 0.00 5.28
515 516 1.123928 CCCTCAGACCATCTACACCC 58.876 60.000 0.00 0.00 0.00 4.61
516 517 1.123928 CCCCTCAGACCATCTACACC 58.876 60.000 0.00 0.00 0.00 4.16
517 518 1.757699 GTCCCCTCAGACCATCTACAC 59.242 57.143 0.00 0.00 0.00 2.90
518 519 2.160721 GTCCCCTCAGACCATCTACA 57.839 55.000 0.00 0.00 0.00 2.74
526 527 1.680249 GCATCAAAGGTCCCCTCAGAC 60.680 57.143 0.00 0.00 35.95 3.51
568 569 3.970610 CACATACGTACGTACCTATGTGC 59.029 47.826 36.77 12.83 42.90 4.57
573 574 1.946768 GGGCACATACGTACGTACCTA 59.053 52.381 28.99 10.80 33.01 3.08
575 576 0.455410 TGGGCACATACGTACGTACC 59.545 55.000 28.99 23.52 33.01 3.34
576 577 1.548986 GTGGGCACATACGTACGTAC 58.451 55.000 28.99 15.90 33.01 3.67
578 579 1.153978 CGTGGGCACATACGTACGT 60.154 57.895 25.98 25.98 36.11 3.57
579 580 3.683055 CGTGGGCACATACGTACG 58.317 61.111 15.01 15.01 36.11 3.67
583 584 0.804544 CAGGTACGTGGGCACATACG 60.805 60.000 7.69 0.00 43.96 3.06
584 585 0.533491 TCAGGTACGTGGGCACATAC 59.467 55.000 15.15 0.00 29.99 2.39
607 608 0.778815 CGACTTGACTTGACTCACGC 59.221 55.000 0.00 0.00 0.00 5.34
660 670 3.827898 GAGGGAGGAGTCCGCGTG 61.828 72.222 4.92 0.00 45.05 5.34
680 693 1.078848 CAGGGCAAAGTCGAGAGGG 60.079 63.158 0.00 0.00 0.00 4.30
685 698 2.048222 CGAGCAGGGCAAAGTCGA 60.048 61.111 0.00 0.00 32.32 4.20
686 699 2.048222 TCGAGCAGGGCAAAGTCG 60.048 61.111 0.00 0.00 0.00 4.18
687 700 2.383527 CGTCGAGCAGGGCAAAGTC 61.384 63.158 0.00 0.00 0.00 3.01
714 727 5.391736 GCTGAAACGAGTGAAGCTACTACTA 60.392 44.000 0.00 0.00 0.00 1.82
719 732 1.387084 CGCTGAAACGAGTGAAGCTAC 59.613 52.381 0.00 0.00 34.06 3.58
720 733 1.000607 ACGCTGAAACGAGTGAAGCTA 60.001 47.619 0.00 0.00 36.70 3.32
721 734 0.249489 ACGCTGAAACGAGTGAAGCT 60.249 50.000 0.00 0.00 36.70 3.74
722 735 0.161870 GACGCTGAAACGAGTGAAGC 59.838 55.000 0.00 0.00 36.70 3.86
723 736 1.772182 AGACGCTGAAACGAGTGAAG 58.228 50.000 0.00 0.00 36.70 3.02
724 737 2.124903 GAAGACGCTGAAACGAGTGAA 58.875 47.619 0.00 0.00 36.70 3.18
725 738 1.066454 TGAAGACGCTGAAACGAGTGA 59.934 47.619 0.00 0.00 36.70 3.41
726 739 1.190323 GTGAAGACGCTGAAACGAGTG 59.810 52.381 0.00 0.00 36.70 3.51
727 740 1.067212 AGTGAAGACGCTGAAACGAGT 59.933 47.619 0.00 0.00 35.40 4.18
728 741 1.716581 GAGTGAAGACGCTGAAACGAG 59.283 52.381 0.00 0.00 36.96 4.18
729 742 1.767289 GAGTGAAGACGCTGAAACGA 58.233 50.000 0.00 0.00 36.96 3.85
730 743 0.431233 CGAGTGAAGACGCTGAAACG 59.569 55.000 0.00 0.00 36.96 3.60
731 744 1.488527 ACGAGTGAAGACGCTGAAAC 58.511 50.000 0.00 0.00 36.96 2.78
732 745 2.218953 AACGAGTGAAGACGCTGAAA 57.781 45.000 0.00 0.00 36.96 2.69
733 746 2.124903 GAAACGAGTGAAGACGCTGAA 58.875 47.619 0.00 0.00 36.96 3.02
734 747 1.066454 TGAAACGAGTGAAGACGCTGA 59.934 47.619 0.00 0.00 36.96 4.26
735 748 1.453524 CTGAAACGAGTGAAGACGCTG 59.546 52.381 0.00 0.00 36.96 5.18
736 749 1.772182 CTGAAACGAGTGAAGACGCT 58.228 50.000 0.00 0.00 39.75 5.07
737 750 0.161870 GCTGAAACGAGTGAAGACGC 59.838 55.000 0.00 0.00 0.00 5.19
738 751 0.431233 CGCTGAAACGAGTGAAGACG 59.569 55.000 0.00 0.00 34.06 4.18
739 752 1.452399 GACGCTGAAACGAGTGAAGAC 59.548 52.381 0.00 0.00 36.70 3.01
740 753 1.337071 AGACGCTGAAACGAGTGAAGA 59.663 47.619 0.00 0.00 36.70 2.87
787 800 1.694133 TTGGTTTGGCTTGGCTTGGG 61.694 55.000 0.00 0.00 0.00 4.12
822 840 3.488553 GGCGAATTTACACAGGGCAATAC 60.489 47.826 0.00 0.00 0.00 1.89
827 848 1.427819 CGGCGAATTTACACAGGGC 59.572 57.895 0.00 0.00 0.00 5.19
883 904 2.049185 GCTGTGGAGAGAGCGAGGA 61.049 63.158 0.00 0.00 0.00 3.71
885 906 1.028130 TATGCTGTGGAGAGAGCGAG 58.972 55.000 0.00 0.00 41.49 5.03
886 907 1.406898 CTTATGCTGTGGAGAGAGCGA 59.593 52.381 0.00 0.00 41.49 4.93
887 908 1.406898 TCTTATGCTGTGGAGAGAGCG 59.593 52.381 0.00 0.00 41.49 5.03
888 909 2.224018 CCTCTTATGCTGTGGAGAGAGC 60.224 54.545 0.00 0.00 38.27 4.09
889 910 2.224018 GCCTCTTATGCTGTGGAGAGAG 60.224 54.545 0.00 0.00 38.27 3.20
890 911 1.759445 GCCTCTTATGCTGTGGAGAGA 59.241 52.381 0.00 0.00 38.27 3.10
891 912 1.202627 GGCCTCTTATGCTGTGGAGAG 60.203 57.143 0.00 0.00 36.30 3.20
892 913 0.833287 GGCCTCTTATGCTGTGGAGA 59.167 55.000 0.00 0.00 0.00 3.71
893 914 0.531532 CGGCCTCTTATGCTGTGGAG 60.532 60.000 0.00 0.00 0.00 3.86
894 915 1.522092 CGGCCTCTTATGCTGTGGA 59.478 57.895 0.00 0.00 0.00 4.02
895 916 1.524621 CCGGCCTCTTATGCTGTGG 60.525 63.158 0.00 0.00 33.12 4.17
896 917 1.524621 CCCGGCCTCTTATGCTGTG 60.525 63.158 0.00 0.00 33.12 3.66
897 918 2.746375 CCCCGGCCTCTTATGCTGT 61.746 63.158 0.00 0.00 33.12 4.40
917 938 0.461870 TTGCTACCATAGTGCTGGCG 60.462 55.000 0.00 0.00 40.15 5.69
918 939 1.017387 GTTGCTACCATAGTGCTGGC 58.983 55.000 0.00 0.00 40.15 4.85
920 941 3.193263 CAGAGTTGCTACCATAGTGCTG 58.807 50.000 0.00 0.00 0.00 4.41
921 942 2.419297 GCAGAGTTGCTACCATAGTGCT 60.419 50.000 0.00 0.00 46.95 4.40
922 943 1.936547 GCAGAGTTGCTACCATAGTGC 59.063 52.381 0.00 0.00 46.95 4.40
980 1002 1.490693 CGACGGCGATGGATTTGGAG 61.491 60.000 16.62 0.00 40.82 3.86
1109 1143 3.589951 AGGTGCCATAAGCTTGATGAT 57.410 42.857 9.86 0.00 44.23 2.45
1110 1144 3.370840 AAGGTGCCATAAGCTTGATGA 57.629 42.857 9.86 0.00 44.23 2.92
1181 1224 3.688673 AGAATAGAAAGTTGCAGCAGAGC 59.311 43.478 2.55 0.00 0.00 4.09
1204 1247 5.728637 TCTGACTGAATGTGTGTAGTCAT 57.271 39.130 6.41 0.00 45.80 3.06
1205 1248 5.529581 TTCTGACTGAATGTGTGTAGTCA 57.470 39.130 0.00 0.00 45.08 3.41
1206 1249 5.177696 GGTTTCTGACTGAATGTGTGTAGTC 59.822 44.000 0.00 0.00 39.88 2.59
1207 1250 5.057149 GGTTTCTGACTGAATGTGTGTAGT 58.943 41.667 0.00 0.00 34.24 2.73
1240 1356 4.424430 CGCGGCACCGAACGAAAG 62.424 66.667 14.43 0.00 42.83 2.62
1394 1510 3.706594 AGTTTTCAGACAGTGAGTGAGGA 59.293 43.478 0.00 0.00 36.21 3.71
1395 1511 4.065321 AGTTTTCAGACAGTGAGTGAGG 57.935 45.455 0.00 0.00 36.21 3.86
1399 1515 7.171678 GCTGTATAAAGTTTTCAGACAGTGAGT 59.828 37.037 12.44 0.00 36.21 3.41
1403 1519 6.296026 TGGCTGTATAAAGTTTTCAGACAGT 58.704 36.000 15.08 0.00 38.92 3.55
1413 1542 4.576330 AAGGAGCTGGCTGTATAAAGTT 57.424 40.909 0.00 0.00 0.00 2.66
1415 1544 5.649831 AGAAAAAGGAGCTGGCTGTATAAAG 59.350 40.000 0.00 0.00 0.00 1.85
1416 1545 5.570320 AGAAAAAGGAGCTGGCTGTATAAA 58.430 37.500 0.00 0.00 0.00 1.40
1419 1548 3.728385 AGAAAAAGGAGCTGGCTGTAT 57.272 42.857 0.00 0.00 0.00 2.29
1420 1549 3.181445 TGAAGAAAAAGGAGCTGGCTGTA 60.181 43.478 0.00 0.00 0.00 2.74
1421 1550 2.234143 GAAGAAAAAGGAGCTGGCTGT 58.766 47.619 0.00 0.00 0.00 4.40
1423 1552 2.158549 ACTGAAGAAAAAGGAGCTGGCT 60.159 45.455 0.00 0.00 0.00 4.75
1424 1553 2.234143 ACTGAAGAAAAAGGAGCTGGC 58.766 47.619 0.00 0.00 0.00 4.85
1425 1554 5.707298 TCATAACTGAAGAAAAAGGAGCTGG 59.293 40.000 0.00 0.00 0.00 4.85
1427 1556 6.538263 AGTCATAACTGAAGAAAAAGGAGCT 58.462 36.000 0.00 0.00 33.32 4.09
1428 1557 6.809630 AGTCATAACTGAAGAAAAAGGAGC 57.190 37.500 0.00 0.00 33.32 4.70
1429 1558 8.072567 CACAAGTCATAACTGAAGAAAAAGGAG 58.927 37.037 0.00 0.00 35.36 3.69
1430 1559 7.773224 TCACAAGTCATAACTGAAGAAAAAGGA 59.227 33.333 0.00 0.00 35.36 3.36
1448 1577 1.615883 TCTGCTCCTCAGTCACAAGTC 59.384 52.381 0.00 0.00 43.32 3.01
1452 1581 0.829182 TGCTCTGCTCCTCAGTCACA 60.829 55.000 0.00 0.00 43.32 3.58
1453 1582 0.108709 CTGCTCTGCTCCTCAGTCAC 60.109 60.000 0.00 0.00 43.32 3.67
1454 1583 0.541530 ACTGCTCTGCTCCTCAGTCA 60.542 55.000 0.00 0.00 43.32 3.41
1455 1584 1.405105 CTACTGCTCTGCTCCTCAGTC 59.595 57.143 5.74 0.00 43.32 3.51
1456 1585 1.272425 ACTACTGCTCTGCTCCTCAGT 60.272 52.381 0.00 0.00 43.32 3.41
1457 1586 1.473258 ACTACTGCTCTGCTCCTCAG 58.527 55.000 0.00 0.00 44.21 3.35
1459 1588 2.099405 AGAACTACTGCTCTGCTCCTC 58.901 52.381 0.00 0.00 0.00 3.71
1460 1589 1.824230 CAGAACTACTGCTCTGCTCCT 59.176 52.381 0.00 0.00 39.86 3.69
1461 1590 1.821753 TCAGAACTACTGCTCTGCTCC 59.178 52.381 0.00 0.00 45.38 4.70
1462 1591 3.056891 AGTTCAGAACTACTGCTCTGCTC 60.057 47.826 14.58 0.00 45.38 4.26
1463 1592 2.896685 AGTTCAGAACTACTGCTCTGCT 59.103 45.455 14.58 0.00 45.38 4.24
1464 1593 3.311486 AGTTCAGAACTACTGCTCTGC 57.689 47.619 14.58 0.00 45.38 4.26
1465 1594 5.755375 TCAAAAGTTCAGAACTACTGCTCTG 59.245 40.000 16.46 6.54 45.38 3.35
1466 1595 5.755861 GTCAAAAGTTCAGAACTACTGCTCT 59.244 40.000 16.46 0.00 45.38 4.09
1467 1596 5.332656 CGTCAAAAGTTCAGAACTACTGCTC 60.333 44.000 16.46 11.01 45.38 4.26
1470 1599 5.047847 TCCGTCAAAAGTTCAGAACTACTG 58.952 41.667 16.46 15.31 46.97 2.74
1483 1612 3.000041 TCATTCGTCCATCCGTCAAAAG 59.000 45.455 0.00 0.00 0.00 2.27
1488 1617 2.821546 TCAATCATTCGTCCATCCGTC 58.178 47.619 0.00 0.00 0.00 4.79
1490 1619 2.935849 TGTTCAATCATTCGTCCATCCG 59.064 45.455 0.00 0.00 0.00 4.18
1500 1629 1.474077 GCGCTTCCCTGTTCAATCATT 59.526 47.619 0.00 0.00 0.00 2.57
1501 1630 1.098050 GCGCTTCCCTGTTCAATCAT 58.902 50.000 0.00 0.00 0.00 2.45
1505 1634 2.260869 GCAGCGCTTCCCTGTTCAA 61.261 57.895 7.50 0.00 32.93 2.69
1683 1812 0.673644 CCAGTTAGTTCAGCACCGGG 60.674 60.000 6.32 0.00 0.00 5.73
1684 1813 1.298859 GCCAGTTAGTTCAGCACCGG 61.299 60.000 0.00 0.00 0.00 5.28
1685 1814 0.320771 AGCCAGTTAGTTCAGCACCG 60.321 55.000 0.00 0.00 0.00 4.94
1686 1815 1.897560 AAGCCAGTTAGTTCAGCACC 58.102 50.000 0.00 0.00 0.00 5.01
1688 1817 4.551702 TGATAAGCCAGTTAGTTCAGCA 57.448 40.909 0.00 0.00 0.00 4.41
1689 1818 5.363939 AGATGATAAGCCAGTTAGTTCAGC 58.636 41.667 0.00 0.00 0.00 4.26
1708 1851 0.935898 GCAGGCAGACGAATGAGATG 59.064 55.000 0.00 0.00 0.00 2.90
1881 2029 3.134458 CCAACTCACAAGACCAGTCTTC 58.866 50.000 10.08 0.00 46.13 2.87
1901 2049 3.942829 TCAGAAACCATCATGAGACACC 58.057 45.455 0.09 0.00 0.00 4.16
2065 2228 6.258947 GGACATGGTCCGAAAATTTTCAAAAA 59.741 34.615 26.20 10.99 43.14 1.94
2090 2253 6.966435 AAATTAGCACCAAATTTCATTCCG 57.034 33.333 0.00 0.00 32.43 4.30
2117 2280 1.437089 CGTCAGAAACACAAGCGCG 60.437 57.895 0.00 0.00 0.00 6.86
2121 2284 3.049912 TCGATCACGTCAGAAACACAAG 58.950 45.455 0.00 0.00 40.69 3.16
2141 2304 1.186267 ACCTCTCGGAACCTGGTGTC 61.186 60.000 0.00 0.12 0.00 3.67
2178 2341 2.107141 GATTCGTCCGGGGAGCTG 59.893 66.667 0.00 0.00 0.00 4.24
2229 2392 2.512896 GCCTGTATGAGGGCCTGG 59.487 66.667 12.95 5.73 43.07 4.45
2241 2404 2.501723 CTGTATCAACTACCTGGCCTGT 59.498 50.000 3.32 3.69 0.00 4.00
2244 2407 1.486726 AGCTGTATCAACTACCTGGCC 59.513 52.381 0.00 0.00 0.00 5.36
2271 2444 8.092687 GTCAAGTTTTGGAGACAGGTATACTTA 58.907 37.037 2.25 0.00 44.54 2.24
2277 2450 5.601313 ACTAGTCAAGTTTTGGAGACAGGTA 59.399 40.000 0.00 0.00 36.92 3.08
2278 2451 3.933861 AGTCAAGTTTTGGAGACAGGT 57.066 42.857 0.00 0.00 44.54 4.00
2299 2472 0.732571 CACCAGAACACACGCAAACT 59.267 50.000 0.00 0.00 0.00 2.66
2306 2479 7.254898 CCATGTCATAATATCACCAGAACACAC 60.255 40.741 0.00 0.00 0.00 3.82
2308 2481 6.767902 ACCATGTCATAATATCACCAGAACAC 59.232 38.462 0.00 0.00 0.00 3.32
2320 2493 5.719085 AGCAAACCCAAACCATGTCATAATA 59.281 36.000 0.00 0.00 0.00 0.98
2326 2499 2.482864 CAAGCAAACCCAAACCATGTC 58.517 47.619 0.00 0.00 0.00 3.06
2362 2535 2.408022 CCGACGAGGACGATGGAC 59.592 66.667 0.00 0.00 45.00 4.02
2392 2565 0.683179 TCTGATCGTCGTCCCATGGT 60.683 55.000 11.73 0.00 0.00 3.55
2431 2604 0.507358 GGAAGTTATCGAATCGGCGC 59.493 55.000 0.00 0.00 0.00 6.53
2459 2632 6.828785 AGAAACAAAGTGACAATGGTTCTACT 59.171 34.615 16.09 0.00 46.35 2.57
2493 2667 2.361119 GACATGGCATGAATGAGCATGT 59.639 45.455 32.74 8.69 45.70 3.21
2508 2682 5.420409 GGACTGAGTTAGTTTAGGACATGG 58.580 45.833 0.00 0.00 40.53 3.66
2632 2816 0.032615 ACTGGCTCGGGATCTTCTCT 60.033 55.000 0.00 0.00 0.00 3.10
2663 2847 1.123077 TACCTGATTCGCTGGCTGAT 58.877 50.000 0.00 0.00 39.08 2.90
2674 2858 3.220110 CATTGCTGGCTCATACCTGATT 58.780 45.455 0.00 0.00 0.00 2.57
2683 2867 1.348696 TCTCTGAACATTGCTGGCTCA 59.651 47.619 0.00 0.00 0.00 4.26
2684 2868 2.105006 TCTCTGAACATTGCTGGCTC 57.895 50.000 0.00 0.00 0.00 4.70
2708 2892 4.199432 AGATCAACCTTCAGTGCTACAG 57.801 45.455 0.00 0.00 0.00 2.74
2728 2912 7.663043 AGGGAGTAAACTTCTAGACCAATAG 57.337 40.000 0.00 0.00 0.00 1.73
2750 2935 8.930846 ATGGACCATATAAGATTGAGAAAAGG 57.069 34.615 4.75 0.00 0.00 3.11
2862 3047 1.884579 CCATATCATGAACCTGCCTGC 59.115 52.381 0.00 0.00 0.00 4.85
2866 3051 3.544684 TGTGACCATATCATGAACCTGC 58.455 45.455 0.00 0.00 40.28 4.85
2954 3139 1.753073 GATGTGGGCTGGAAATTGAGG 59.247 52.381 0.00 0.00 0.00 3.86
2959 3144 1.064166 CAGGAGATGTGGGCTGGAAAT 60.064 52.381 0.00 0.00 0.00 2.17
3009 3211 8.079211 ACTAGCCAACTCTGTCAATAAAGATA 57.921 34.615 0.00 0.00 0.00 1.98
3085 3287 7.546316 CACCACAATTCATATTTGCTGATTCAA 59.454 33.333 0.00 0.00 0.00 2.69
3098 3300 9.913310 TTTCTTATATGACCACCACAATTCATA 57.087 29.630 0.00 0.00 35.84 2.15
3143 3346 3.133003 TGGGAAAATTGCCTCGTTTCAAA 59.867 39.130 5.27 0.00 39.72 2.69
3154 3357 6.616774 TGTTTCATTCTTTGGGAAAATTGC 57.383 33.333 0.00 0.00 37.49 3.56
3156 3359 9.276590 GAAGATGTTTCATTCTTTGGGAAAATT 57.723 29.630 0.00 0.00 37.49 1.82
3227 3432 0.526662 GACTCACGAGGGTGTTCGAT 59.473 55.000 2.12 0.00 44.68 3.59
3281 3487 4.508662 CTTGGGTTCTTCCTGTAGATGTC 58.491 47.826 0.00 0.00 36.25 3.06
3358 3567 2.125832 GATCGAAACACGGGCCGA 60.126 61.111 35.78 8.64 42.82 5.54
3592 3801 4.492160 GCCGACACGAGATCCGCA 62.492 66.667 0.00 0.00 43.32 5.69
3661 3870 2.928731 GCTCAAGTTCAAGGAGGAGACG 60.929 54.545 0.00 0.00 0.00 4.18
3752 3961 9.522804 CTGAGTTATAACTAACCTTCATCTGAC 57.477 37.037 18.03 1.72 39.88 3.51
3754 3963 9.877178 AACTGAGTTATAACTAACCTTCATCTG 57.123 33.333 18.03 8.97 39.88 2.90
3756 3965 9.871238 TGAACTGAGTTATAACTAACCTTCATC 57.129 33.333 18.03 7.32 39.88 2.92
3759 3968 8.035984 AGCTGAACTGAGTTATAACTAACCTTC 58.964 37.037 18.03 14.97 39.88 3.46
3762 3971 9.819267 ATAAGCTGAACTGAGTTATAACTAACC 57.181 33.333 18.03 6.95 39.88 2.85
3766 3975 9.593134 CTTGATAAGCTGAACTGAGTTATAACT 57.407 33.333 18.05 18.05 43.16 2.24
3767 3976 9.587772 TCTTGATAAGCTGAACTGAGTTATAAC 57.412 33.333 7.57 7.57 0.00 1.89
3774 3983 7.201626 CCTTGATTCTTGATAAGCTGAACTGAG 60.202 40.741 0.00 0.00 0.00 3.35
3787 3996 4.015084 CAACAGCCTCCTTGATTCTTGAT 58.985 43.478 0.00 0.00 0.00 2.57
3791 4000 3.265221 TCATCAACAGCCTCCTTGATTCT 59.735 43.478 0.00 0.00 35.37 2.40
3793 4002 3.245016 TGTCATCAACAGCCTCCTTGATT 60.245 43.478 0.00 0.00 35.37 2.57
3797 4006 2.957402 TTGTCATCAACAGCCTCCTT 57.043 45.000 0.00 0.00 39.58 3.36
3812 4021 4.053903 CAAATCGTCCTTTCTCGTTGTC 57.946 45.455 0.00 0.00 0.00 3.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.