Multiple sequence alignment - TraesCS5D01G373200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G373200 chr5D 100.000 4750 0 0 1 4750 446760225 446755476 0.000000e+00 8772
1 TraesCS5D01G373200 chr5D 80.778 1389 175 48 2668 4008 446574134 446572790 0.000000e+00 1002
2 TraesCS5D01G373200 chr5D 93.805 226 14 0 4524 4749 235532229 235532004 1.640000e-89 340
3 TraesCS5D01G373200 chr5D 89.591 269 27 1 3624 3891 446684284 446684016 1.640000e-89 340
4 TraesCS5D01G373200 chr5D 83.740 123 10 5 4126 4242 446572639 446572521 1.810000e-19 108
5 TraesCS5D01G373200 chr5A 90.429 2236 125 29 1 2212 564601320 564599150 0.000000e+00 2861
6 TraesCS5D01G373200 chr5A 91.620 1778 102 21 2746 4523 564596452 564594722 0.000000e+00 2414
7 TraesCS5D01G373200 chr5A 87.984 258 18 9 2480 2731 564598239 564597989 4.650000e-75 292
8 TraesCS5D01G373200 chr5A 88.889 234 23 3 3605 3838 564536138 564535908 7.780000e-73 285
9 TraesCS5D01G373200 chr5A 82.377 244 38 5 3769 4009 564589693 564589452 1.730000e-49 207
10 TraesCS5D01G373200 chr5A 91.729 133 11 0 3624 3756 564582687 564582555 8.120000e-43 185
11 TraesCS5D01G373200 chr5B 87.085 2563 212 52 1991 4523 544907948 544905475 0.000000e+00 2789
12 TraesCS5D01G373200 chr5B 95.380 1277 47 9 1 1273 544910560 544909292 0.000000e+00 2021
13 TraesCS5D01G373200 chr5B 80.895 1251 155 40 2812 4013 544767406 544766191 0.000000e+00 909
14 TraesCS5D01G373200 chr5B 78.556 471 73 19 1805 2266 544908877 544908426 7.780000e-73 285
15 TraesCS5D01G373200 chr5B 83.830 235 33 5 3761 3992 544813037 544812805 8.000000e-53 219
16 TraesCS5D01G373200 chr5B 81.595 163 22 5 4123 4278 544766054 544765893 1.390000e-25 128
17 TraesCS5D01G373200 chr5B 77.828 221 27 10 4319 4521 700326920 700326704 3.000000e-22 117
18 TraesCS5D01G373200 chr7D 95.154 227 11 0 4524 4750 372994370 372994144 4.520000e-95 359
19 TraesCS5D01G373200 chr3A 92.544 228 16 1 4523 4750 105136946 105137172 4.580000e-85 326
20 TraesCS5D01G373200 chr2D 92.105 228 17 1 4523 4750 311658298 311658072 2.130000e-83 320
21 TraesCS5D01G373200 chr1B 92.105 228 16 1 4525 4750 438519589 438519816 2.130000e-83 320
22 TraesCS5D01G373200 chr7B 92.105 228 14 3 4524 4747 336532534 336532307 7.670000e-83 318
23 TraesCS5D01G373200 chr4D 91.667 228 17 1 4525 4750 186290558 186290331 9.920000e-82 315
24 TraesCS5D01G373200 chr4D 87.195 164 20 1 4126 4289 14198913 14198751 8.120000e-43 185
25 TraesCS5D01G373200 chr4B 91.266 229 19 1 4523 4750 324477083 324476855 1.280000e-80 311
26 TraesCS5D01G373200 chr1D 91.304 230 16 1 4524 4749 143589337 143589108 1.280000e-80 311
27 TraesCS5D01G373200 chr2B 78.814 472 72 18 1804 2268 103485843 103486293 4.650000e-75 292
28 TraesCS5D01G373200 chr2B 77.474 475 74 23 1804 2268 472575849 472576300 2.190000e-63 254
29 TraesCS5D01G373200 chr6B 78.224 473 74 20 1804 2268 380971822 380972273 4.680000e-70 276
30 TraesCS5D01G373200 chr3B 77.426 474 75 22 1804 2268 778613752 778613302 2.190000e-63 254
31 TraesCS5D01G373200 chr7A 79.091 220 29 6 4319 4521 445466448 445466229 8.290000e-28 135
32 TraesCS5D01G373200 chr4A 88.889 90 10 0 4319 4408 620186015 620185926 1.400000e-20 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G373200 chr5D 446755476 446760225 4749 True 8772.000000 8772 100.000 1 4750 1 chr5D.!!$R3 4749
1 TraesCS5D01G373200 chr5D 446572521 446574134 1613 True 555.000000 1002 82.259 2668 4242 2 chr5D.!!$R4 1574
2 TraesCS5D01G373200 chr5A 564594722 564601320 6598 True 1855.666667 2861 90.011 1 4523 3 chr5A.!!$R4 4522
3 TraesCS5D01G373200 chr5B 544905475 544910560 5085 True 1698.333333 2789 87.007 1 4523 3 chr5B.!!$R4 4522
4 TraesCS5D01G373200 chr5B 544765893 544767406 1513 True 518.500000 909 81.245 2812 4278 2 chr5B.!!$R3 1466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 292 0.248377 GAATGAGCGAGCAATGTGGC 60.248 55.0 0.0 0.0 0.0 5.01 F
1733 1783 0.547553 TGCTGCCCATGAATCTGCTA 59.452 50.0 0.0 0.0 0.0 3.49 F
2416 3242 0.243636 GCTTGGAAAATGTGACCCGG 59.756 55.0 0.0 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 1902 0.254462 GCCCTCCTCCTTCTCCAAAG 59.746 60.0 0.0 0.0 0.0 2.77 R
3576 6022 0.039527 AAATGACGCAAAACTCGCCC 60.040 50.0 0.0 0.0 0.0 6.13 R
4407 6994 0.961753 CAAAGTCAGGTTCCAAGCCC 59.038 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 2.416431 GCAATGTGCACAATCTTCCCTC 60.416 50.000 25.72 2.11 44.26 4.30
103 104 1.447489 CCTCGGCAACAGCTCTCTG 60.447 63.158 0.00 0.00 45.71 3.35
136 137 1.931007 GCCCCAGAGCTCCAAATCCT 61.931 60.000 10.93 0.00 0.00 3.24
150 151 0.474184 AATCCTCCATAACCCCTGCG 59.526 55.000 0.00 0.00 0.00 5.18
152 153 2.070039 CCTCCATAACCCCTGCGGA 61.070 63.158 0.00 0.00 34.64 5.54
203 204 1.203052 CAGCCACAACCATCAACCATC 59.797 52.381 0.00 0.00 0.00 3.51
236 238 1.095600 AGCACATTCTACTCTCGCGA 58.904 50.000 9.26 9.26 0.00 5.87
244 246 2.572290 TCTACTCTCGCGATTCATCCA 58.428 47.619 10.36 0.00 0.00 3.41
290 292 0.248377 GAATGAGCGAGCAATGTGGC 60.248 55.000 0.00 0.00 0.00 5.01
393 395 2.672996 CCAGCGAGGTTGGGGTTG 60.673 66.667 0.00 0.00 30.12 3.77
749 751 3.138798 GGCGGCACTCGAGGTAGA 61.139 66.667 18.41 0.00 42.43 2.59
938 951 1.675552 CAACCCAACAACTCTCCGTT 58.324 50.000 0.00 0.00 35.88 4.44
961 974 2.683933 GGCACGGAAGGAGGAGGA 60.684 66.667 0.00 0.00 0.00 3.71
962 975 2.726351 GGCACGGAAGGAGGAGGAG 61.726 68.421 0.00 0.00 0.00 3.69
963 976 2.726351 GCACGGAAGGAGGAGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
964 977 1.000486 CACGGAAGGAGGAGGAGGA 60.000 63.158 0.00 0.00 0.00 3.71
965 978 0.614979 CACGGAAGGAGGAGGAGGAA 60.615 60.000 0.00 0.00 0.00 3.36
1262 1276 4.806339 CGCCCCTCCCCTCTCCTT 62.806 72.222 0.00 0.00 0.00 3.36
1263 1277 2.770475 GCCCCTCCCCTCTCCTTC 60.770 72.222 0.00 0.00 0.00 3.46
1264 1278 2.040359 CCCCTCCCCTCTCCTTCC 60.040 72.222 0.00 0.00 0.00 3.46
1265 1279 2.652113 CCCCTCCCCTCTCCTTCCT 61.652 68.421 0.00 0.00 0.00 3.36
1273 1287 1.555765 CCCTCTCCTTCCTTCCTTCCA 60.556 57.143 0.00 0.00 0.00 3.53
1274 1288 1.836802 CCTCTCCTTCCTTCCTTCCAG 59.163 57.143 0.00 0.00 0.00 3.86
1291 1305 4.329545 GCCAGCCGGTTCTCCACA 62.330 66.667 1.90 0.00 33.28 4.17
1317 1331 1.933812 CCCACCCACCCACCCTATT 60.934 63.158 0.00 0.00 0.00 1.73
1349 1363 4.017222 ACAAAATGGATCTTGGGAGGATGA 60.017 41.667 0.00 0.00 0.00 2.92
1354 1368 3.528905 TGGATCTTGGGAGGATGAAACAT 59.471 43.478 0.00 0.00 0.00 2.71
1355 1369 4.017222 TGGATCTTGGGAGGATGAAACATT 60.017 41.667 0.00 0.00 0.00 2.71
1356 1370 4.340381 GGATCTTGGGAGGATGAAACATTG 59.660 45.833 0.00 0.00 0.00 2.82
1357 1371 4.656100 TCTTGGGAGGATGAAACATTGA 57.344 40.909 0.00 0.00 0.00 2.57
1358 1372 5.197224 TCTTGGGAGGATGAAACATTGAT 57.803 39.130 0.00 0.00 0.00 2.57
1416 1430 2.487762 TGCTCATTGATTCCGTTGGTTC 59.512 45.455 0.00 0.00 0.00 3.62
1428 1443 3.119245 TCCGTTGGTTCAGATGTACTAGC 60.119 47.826 0.00 0.00 0.00 3.42
1492 1524 2.573915 GAGAGAAGGTTGGGATCTTGGT 59.426 50.000 0.00 0.00 0.00 3.67
1493 1525 2.989571 AGAGAAGGTTGGGATCTTGGTT 59.010 45.455 0.00 0.00 0.00 3.67
1494 1526 4.175962 AGAGAAGGTTGGGATCTTGGTTA 58.824 43.478 0.00 0.00 0.00 2.85
1495 1527 4.601857 AGAGAAGGTTGGGATCTTGGTTAA 59.398 41.667 0.00 0.00 0.00 2.01
1496 1528 5.254032 AGAGAAGGTTGGGATCTTGGTTAAT 59.746 40.000 0.00 0.00 0.00 1.40
1497 1529 5.903923 AGAAGGTTGGGATCTTGGTTAATT 58.096 37.500 0.00 0.00 0.00 1.40
1498 1530 6.322931 AGAAGGTTGGGATCTTGGTTAATTT 58.677 36.000 0.00 0.00 0.00 1.82
1499 1531 6.437477 AGAAGGTTGGGATCTTGGTTAATTTC 59.563 38.462 0.00 0.00 0.00 2.17
1500 1532 4.705023 AGGTTGGGATCTTGGTTAATTTCG 59.295 41.667 0.00 0.00 0.00 3.46
1501 1533 4.142249 GGTTGGGATCTTGGTTAATTTCGG 60.142 45.833 0.00 0.00 0.00 4.30
1502 1534 4.310022 TGGGATCTTGGTTAATTTCGGT 57.690 40.909 0.00 0.00 0.00 4.69
1503 1535 4.668636 TGGGATCTTGGTTAATTTCGGTT 58.331 39.130 0.00 0.00 0.00 4.44
1504 1536 4.461081 TGGGATCTTGGTTAATTTCGGTTG 59.539 41.667 0.00 0.00 0.00 3.77
1505 1537 4.142249 GGGATCTTGGTTAATTTCGGTTGG 60.142 45.833 0.00 0.00 0.00 3.77
1518 1550 3.485463 TCGGTTGGAACAGAAGAACAT 57.515 42.857 0.00 0.00 42.39 2.71
1540 1572 3.363787 AGCCCTTTTTGCTCCGAAT 57.636 47.368 0.00 0.00 32.41 3.34
1545 1577 3.865164 GCCCTTTTTGCTCCGAATTTATG 59.135 43.478 0.00 0.00 0.00 1.90
1552 1584 7.447374 TTTTGCTCCGAATTTATGAGAAAGA 57.553 32.000 4.55 0.00 0.00 2.52
1558 1591 7.201644 GCTCCGAATTTATGAGAAAGATCACAA 60.202 37.037 0.00 0.00 29.78 3.33
1571 1604 7.383687 AGAAAGATCACAATTAGTCCGTTGTA 58.616 34.615 0.00 0.00 36.48 2.41
1575 1608 4.633175 TCACAATTAGTCCGTTGTAAGCA 58.367 39.130 0.00 0.00 36.48 3.91
1609 1642 3.604875 TGAGTCAGAATTTACCGTCCC 57.395 47.619 0.00 0.00 0.00 4.46
1670 1713 4.505808 TGTTCCAGTTTGACAGTTTCGTA 58.494 39.130 0.00 0.00 0.00 3.43
1674 1717 4.748102 TCCAGTTTGACAGTTTCGTATGTC 59.252 41.667 0.00 0.00 44.88 3.06
1728 1778 1.760192 AACTCTGCTGCCCATGAATC 58.240 50.000 0.00 0.00 0.00 2.52
1729 1779 0.917533 ACTCTGCTGCCCATGAATCT 59.082 50.000 0.00 0.00 0.00 2.40
1730 1780 1.309950 CTCTGCTGCCCATGAATCTG 58.690 55.000 0.00 0.00 0.00 2.90
1733 1783 0.547553 TGCTGCCCATGAATCTGCTA 59.452 50.000 0.00 0.00 0.00 3.49
1738 1788 4.142790 CTGCCCATGAATCTGCTAAATCT 58.857 43.478 0.00 0.00 0.00 2.40
1739 1789 4.539726 TGCCCATGAATCTGCTAAATCTT 58.460 39.130 0.00 0.00 0.00 2.40
1763 1813 9.778741 CTTTTATACTCTATATGTTCCAGCCAA 57.221 33.333 0.00 0.00 0.00 4.52
1782 1832 3.181467 CCAAGTTTGGTTGGCATGAAGAA 60.181 43.478 0.00 0.00 43.43 2.52
1783 1833 3.733443 AGTTTGGTTGGCATGAAGAAC 57.267 42.857 0.00 0.00 0.00 3.01
1784 1834 2.034558 AGTTTGGTTGGCATGAAGAACG 59.965 45.455 0.00 0.00 0.00 3.95
1785 1835 1.974265 TTGGTTGGCATGAAGAACGA 58.026 45.000 0.00 0.00 0.00 3.85
1786 1836 1.522668 TGGTTGGCATGAAGAACGAG 58.477 50.000 0.00 0.00 0.00 4.18
1787 1837 1.071542 TGGTTGGCATGAAGAACGAGA 59.928 47.619 0.00 0.00 0.00 4.04
1788 1838 2.151202 GGTTGGCATGAAGAACGAGAA 58.849 47.619 0.00 0.00 0.00 2.87
1790 1840 1.808411 TGGCATGAAGAACGAGAACC 58.192 50.000 0.00 0.00 0.00 3.62
1804 1854 7.437748 AGAACGAGAACCTCCAGATAATTATG 58.562 38.462 1.78 0.00 0.00 1.90
1813 1863 7.406104 ACCTCCAGATAATTATGATAAAGGCC 58.594 38.462 1.78 0.00 0.00 5.19
1826 1888 5.070001 TGATAAAGGCCGCATAAGCTAAAT 58.930 37.500 0.00 0.00 39.10 1.40
1828 1890 6.371548 TGATAAAGGCCGCATAAGCTAAATAG 59.628 38.462 0.00 0.00 39.10 1.73
1839 1901 9.197694 CGCATAAGCTAAATAGATAGAAGTGTT 57.802 33.333 0.00 0.00 39.10 3.32
1855 1917 3.318313 AGTGTTCTTTGGAGAAGGAGGA 58.682 45.455 0.00 0.00 42.35 3.71
1856 1918 3.326297 AGTGTTCTTTGGAGAAGGAGGAG 59.674 47.826 0.00 0.00 42.35 3.69
1857 1919 2.639839 TGTTCTTTGGAGAAGGAGGAGG 59.360 50.000 0.00 0.00 42.35 4.30
1862 1924 0.984961 TGGAGAAGGAGGAGGGCATG 60.985 60.000 0.00 0.00 0.00 4.06
1870 1932 2.185310 GAGGAGGGCATGTTGTCGGT 62.185 60.000 0.00 0.00 0.00 4.69
1871 1933 1.745489 GGAGGGCATGTTGTCGGTC 60.745 63.158 0.00 0.00 0.00 4.79
1872 1934 1.003839 GAGGGCATGTTGTCGGTCA 60.004 57.895 0.00 0.00 0.00 4.02
1902 1964 5.824904 ATACAGATCTTTTGTGCCATGTC 57.175 39.130 0.00 0.00 0.00 3.06
1909 1971 1.626686 TTTGTGCCATGTCGGGAAAT 58.373 45.000 0.00 0.00 36.51 2.17
1917 1979 4.080807 TGCCATGTCGGGAAATTTCTAGTA 60.081 41.667 17.42 6.81 34.06 1.82
1926 1988 9.931210 GTCGGGAAATTTCTAGTATTATGTTTG 57.069 33.333 17.42 0.00 0.00 2.93
1934 1997 7.534085 TTCTAGTATTATGTTTGAGTTGCCG 57.466 36.000 0.00 0.00 0.00 5.69
1935 1998 4.616181 AGTATTATGTTTGAGTTGCCGC 57.384 40.909 0.00 0.00 0.00 6.53
1937 2000 3.932545 ATTATGTTTGAGTTGCCGCAA 57.067 38.095 0.38 0.38 0.00 4.85
1949 2012 4.043168 CCGCAACGGTTTCTCTGT 57.957 55.556 0.00 0.00 42.73 3.41
1953 2016 0.784778 GCAACGGTTTCTCTGTCTCG 59.215 55.000 0.00 0.00 34.09 4.04
1958 2021 1.272781 GGTTTCTCTGTCTCGCATCG 58.727 55.000 0.00 0.00 0.00 3.84
1959 2022 1.135373 GGTTTCTCTGTCTCGCATCGA 60.135 52.381 0.00 0.00 0.00 3.59
1966 2029 3.890128 TCTGTCTCGCATCGATATGTTC 58.110 45.455 0.00 0.00 34.61 3.18
1974 2037 3.366121 CGCATCGATATGTTCTGGATCAC 59.634 47.826 0.00 0.00 35.38 3.06
1988 2051 3.689347 TGGATCACCAAATGACCTTGAG 58.311 45.455 0.00 0.00 43.91 3.02
2007 2077 4.093743 TGAGGTGTCCTATCTTTGTGCTA 58.906 43.478 0.00 0.00 31.76 3.49
2031 2101 2.586648 AGCCAAAGTTTCCTACTGGG 57.413 50.000 0.00 0.00 37.12 4.45
2044 2114 5.732331 TCCTACTGGGATTGGAAATTGAT 57.268 39.130 0.00 0.00 39.58 2.57
2051 2121 5.203528 TGGGATTGGAAATTGATCCTTCTC 58.796 41.667 9.12 3.07 40.35 2.87
2056 2126 5.698741 TGGAAATTGATCCTTCTCTAGCA 57.301 39.130 0.00 0.00 40.35 3.49
2057 2127 5.678583 TGGAAATTGATCCTTCTCTAGCAG 58.321 41.667 0.00 0.00 40.35 4.24
2058 2128 5.062528 GGAAATTGATCCTTCTCTAGCAGG 58.937 45.833 0.00 0.00 36.50 4.85
2083 2153 2.961741 CACTGGCTCTGCTCCTATCTTA 59.038 50.000 0.00 0.00 0.00 2.10
2092 2162 8.413229 GGCTCTGCTCCTATCTTAATCTTATAG 58.587 40.741 0.00 0.00 0.00 1.31
2111 2181 7.989741 TCTTATAGTACTAGTGTGGGTGTACTC 59.010 40.741 5.39 0.00 42.83 2.59
2114 2184 3.520691 ACTAGTGTGGGTGTACTCTCA 57.479 47.619 0.00 0.00 0.00 3.27
2120 2190 3.997021 GTGTGGGTGTACTCTCAAGATTG 59.003 47.826 0.00 0.00 0.00 2.67
2122 2192 4.836175 TGTGGGTGTACTCTCAAGATTGTA 59.164 41.667 0.00 0.00 0.00 2.41
2129 2199 8.230486 GGTGTACTCTCAAGATTGTAAACATTG 58.770 37.037 0.00 0.00 0.00 2.82
2130 2200 8.230486 GTGTACTCTCAAGATTGTAAACATTGG 58.770 37.037 0.00 0.00 0.00 3.16
2189 2259 3.627395 ACAGTCGCCCAAAATCATCTA 57.373 42.857 0.00 0.00 0.00 1.98
2195 3014 3.694072 TCGCCCAAAATCATCTACCTTTG 59.306 43.478 0.00 0.00 0.00 2.77
2200 3019 5.170748 CCAAAATCATCTACCTTTGGTTGC 58.829 41.667 4.59 0.00 41.84 4.17
2202 3021 6.152661 CCAAAATCATCTACCTTTGGTTGCTA 59.847 38.462 4.59 0.00 41.84 3.49
2221 3040 7.414540 GGTTGCTATTTGACTAATGACAAGGAG 60.415 40.741 0.00 0.00 0.00 3.69
2227 3046 6.428083 TTGACTAATGACAAGGAGTTGGTA 57.572 37.500 0.00 0.00 38.07 3.25
2230 3049 8.141298 TGACTAATGACAAGGAGTTGGTATTA 57.859 34.615 0.00 0.00 38.07 0.98
2233 3052 8.041323 ACTAATGACAAGGAGTTGGTATTACAG 58.959 37.037 0.00 0.00 38.07 2.74
2245 3064 5.939764 TGGTATTACAGCTTGAGACAGAT 57.060 39.130 0.00 0.00 0.00 2.90
2263 3082 8.430801 AGACAGATTACATGAAAGAACTATGC 57.569 34.615 0.00 0.00 0.00 3.14
2264 3083 8.263640 AGACAGATTACATGAAAGAACTATGCT 58.736 33.333 0.00 0.00 0.00 3.79
2265 3084 9.534565 GACAGATTACATGAAAGAACTATGCTA 57.465 33.333 0.00 0.00 0.00 3.49
2266 3085 9.319143 ACAGATTACATGAAAGAACTATGCTAC 57.681 33.333 0.00 0.00 0.00 3.58
2267 3086 9.539825 CAGATTACATGAAAGAACTATGCTACT 57.460 33.333 0.00 0.00 0.00 2.57
2268 3087 9.757227 AGATTACATGAAAGAACTATGCTACTC 57.243 33.333 0.00 0.00 0.00 2.59
2269 3088 8.894768 ATTACATGAAAGAACTATGCTACTCC 57.105 34.615 0.00 0.00 0.00 3.85
2270 3089 5.675538 ACATGAAAGAACTATGCTACTCCC 58.324 41.667 0.00 0.00 0.00 4.30
2271 3090 5.426833 ACATGAAAGAACTATGCTACTCCCT 59.573 40.000 0.00 0.00 0.00 4.20
2272 3091 5.599999 TGAAAGAACTATGCTACTCCCTC 57.400 43.478 0.00 0.00 0.00 4.30
2273 3092 4.406003 TGAAAGAACTATGCTACTCCCTCC 59.594 45.833 0.00 0.00 0.00 4.30
2274 3093 2.588620 AGAACTATGCTACTCCCTCCG 58.411 52.381 0.00 0.00 0.00 4.63
2275 3094 2.091775 AGAACTATGCTACTCCCTCCGT 60.092 50.000 0.00 0.00 0.00 4.69
2276 3095 1.693627 ACTATGCTACTCCCTCCGTG 58.306 55.000 0.00 0.00 0.00 4.94
2277 3096 1.214673 ACTATGCTACTCCCTCCGTGA 59.785 52.381 0.00 0.00 0.00 4.35
2278 3097 1.609555 CTATGCTACTCCCTCCGTGAC 59.390 57.143 0.00 0.00 0.00 3.67
2279 3098 1.384989 ATGCTACTCCCTCCGTGACG 61.385 60.000 0.00 0.00 0.00 4.35
2290 3109 4.315588 CGTGACGGAGGGAGTAGT 57.684 61.111 0.00 0.00 0.00 2.73
2296 3115 3.890147 GTGACGGAGGGAGTAGTTCATAT 59.110 47.826 0.00 0.00 0.00 1.78
2302 3121 7.236529 ACGGAGGGAGTAGTTCATATATTACA 58.763 38.462 0.00 0.00 0.00 2.41
2303 3122 7.894364 ACGGAGGGAGTAGTTCATATATTACAT 59.106 37.037 0.00 0.00 0.00 2.29
2327 3153 9.014297 CATATTATCTTTATTGGTCAGAACCCC 57.986 37.037 0.00 0.00 45.83 4.95
2328 3154 6.652205 TTATCTTTATTGGTCAGAACCCCT 57.348 37.500 0.00 0.00 45.83 4.79
2330 3156 6.848562 ATCTTTATTGGTCAGAACCCCTAT 57.151 37.500 0.00 0.00 45.83 2.57
2331 3157 6.652205 TCTTTATTGGTCAGAACCCCTATT 57.348 37.500 0.00 0.00 45.83 1.73
2334 3160 3.732048 TTGGTCAGAACCCCTATTTCC 57.268 47.619 0.00 0.00 45.83 3.13
2335 3161 2.638325 TGGTCAGAACCCCTATTTCCA 58.362 47.619 0.00 0.00 45.83 3.53
2351 3177 6.261826 CCTATTTCCAAACTCCTTCTAGCATG 59.738 42.308 0.00 0.00 0.00 4.06
2355 3181 4.721776 TCCAAACTCCTTCTAGCATGGTAT 59.278 41.667 4.84 0.00 31.01 2.73
2356 3182 5.191722 TCCAAACTCCTTCTAGCATGGTATT 59.808 40.000 4.84 0.00 31.01 1.89
2365 3191 5.675684 TCTAGCATGGTATTGTTCTGTCA 57.324 39.130 4.84 0.00 0.00 3.58
2368 3194 5.108187 AGCATGGTATTGTTCTGTCATCT 57.892 39.130 0.00 0.00 0.00 2.90
2377 3203 8.680903 GGTATTGTTCTGTCATCTCAATTGATT 58.319 33.333 8.96 0.00 32.27 2.57
2397 3223 9.865321 ATTGATTGACTCCTTATTTGAACATTG 57.135 29.630 0.00 0.00 0.00 2.82
2400 3226 6.899393 TGACTCCTTATTTGAACATTGCTT 57.101 33.333 0.00 0.00 0.00 3.91
2401 3227 6.680810 TGACTCCTTATTTGAACATTGCTTG 58.319 36.000 0.00 0.00 0.00 4.01
2402 3228 6.029346 ACTCCTTATTTGAACATTGCTTGG 57.971 37.500 0.00 0.00 0.00 3.61
2403 3229 5.774690 ACTCCTTATTTGAACATTGCTTGGA 59.225 36.000 0.00 0.00 0.00 3.53
2404 3230 6.267471 ACTCCTTATTTGAACATTGCTTGGAA 59.733 34.615 0.00 0.00 0.00 3.53
2405 3231 7.060383 TCCTTATTTGAACATTGCTTGGAAA 57.940 32.000 0.00 0.00 0.00 3.13
2406 3232 7.504403 TCCTTATTTGAACATTGCTTGGAAAA 58.496 30.769 0.00 0.00 0.00 2.29
2407 3233 8.156165 TCCTTATTTGAACATTGCTTGGAAAAT 58.844 29.630 0.00 0.00 0.00 1.82
2408 3234 8.231837 CCTTATTTGAACATTGCTTGGAAAATG 58.768 33.333 0.00 0.00 39.26 2.32
2409 3235 8.674263 TTATTTGAACATTGCTTGGAAAATGT 57.326 26.923 0.00 0.00 46.35 2.71
2410 3236 5.987777 TTGAACATTGCTTGGAAAATGTG 57.012 34.783 2.08 0.00 44.24 3.21
2411 3237 5.273674 TGAACATTGCTTGGAAAATGTGA 57.726 34.783 2.08 0.00 44.24 3.58
2412 3238 5.049167 TGAACATTGCTTGGAAAATGTGAC 58.951 37.500 2.08 1.82 44.24 3.67
2413 3239 3.993920 ACATTGCTTGGAAAATGTGACC 58.006 40.909 0.50 0.00 43.56 4.02
2414 3240 3.244181 ACATTGCTTGGAAAATGTGACCC 60.244 43.478 0.50 0.00 43.56 4.46
2415 3241 0.958091 TGCTTGGAAAATGTGACCCG 59.042 50.000 0.00 0.00 0.00 5.28
2416 3242 0.243636 GCTTGGAAAATGTGACCCGG 59.756 55.000 0.00 0.00 0.00 5.73
2417 3243 1.904287 CTTGGAAAATGTGACCCGGA 58.096 50.000 0.73 0.00 0.00 5.14
2418 3244 2.235016 CTTGGAAAATGTGACCCGGAA 58.765 47.619 0.73 0.00 0.00 4.30
2419 3245 2.366640 TGGAAAATGTGACCCGGAAA 57.633 45.000 0.73 0.00 0.00 3.13
2420 3246 2.235016 TGGAAAATGTGACCCGGAAAG 58.765 47.619 0.73 0.00 0.00 2.62
2430 3256 1.052124 ACCCGGAAAGTGGTCAGACA 61.052 55.000 0.73 0.00 0.00 3.41
2438 3264 4.691216 GGAAAGTGGTCAGACAGTTGTATC 59.309 45.833 2.17 0.00 34.41 2.24
2439 3265 4.955811 AAGTGGTCAGACAGTTGTATCA 57.044 40.909 2.17 0.00 32.99 2.15
2446 3272 7.387948 GTGGTCAGACAGTTGTATCAAACTTAT 59.612 37.037 2.17 0.00 38.34 1.73
2452 3278 9.429359 AGACAGTTGTATCAAACTTATCTTCTG 57.571 33.333 0.00 0.00 38.34 3.02
2468 3294 9.915629 CTTATCTTCTGTTAGACTTGTAGTTGT 57.084 33.333 0.00 0.00 0.00 3.32
2471 3297 8.461249 TCTTCTGTTAGACTTGTAGTTGTACT 57.539 34.615 0.00 0.00 0.00 2.73
2475 3301 9.956720 TCTGTTAGACTTGTAGTTGTACTAAAC 57.043 33.333 0.00 0.00 31.62 2.01
2476 3302 9.962783 CTGTTAGACTTGTAGTTGTACTAAACT 57.037 33.333 4.24 4.24 42.89 2.66
2477 3303 9.740239 TGTTAGACTTGTAGTTGTACTAAACTG 57.260 33.333 8.47 0.00 40.58 3.16
2478 3304 8.697960 GTTAGACTTGTAGTTGTACTAAACTGC 58.302 37.037 8.47 7.75 40.58 4.40
2524 3350 7.543947 TGTTAGCTTCATGATCACATAACAG 57.456 36.000 0.00 0.00 35.09 3.16
2536 3365 8.039603 TGATCACATAACAGTGTACCATTTTC 57.960 34.615 0.00 0.00 40.37 2.29
2537 3366 7.882791 TGATCACATAACAGTGTACCATTTTCT 59.117 33.333 0.00 0.00 40.37 2.52
2538 3367 7.433708 TCACATAACAGTGTACCATTTTCTG 57.566 36.000 0.00 0.00 40.37 3.02
2539 3368 7.220740 TCACATAACAGTGTACCATTTTCTGA 58.779 34.615 0.00 0.00 40.37 3.27
2580 3410 5.603170 TCTGATGATCACATAGCTTGACA 57.397 39.130 0.00 0.00 36.82 3.58
2581 3411 6.170846 TCTGATGATCACATAGCTTGACAT 57.829 37.500 0.00 0.00 36.82 3.06
2582 3412 7.294017 TCTGATGATCACATAGCTTGACATA 57.706 36.000 0.00 0.00 36.82 2.29
2583 3413 7.150640 TCTGATGATCACATAGCTTGACATAC 58.849 38.462 0.00 0.00 36.82 2.39
2641 3473 6.126863 ACAGAGAATTCCATTACCAACAGA 57.873 37.500 0.65 0.00 0.00 3.41
2642 3474 6.725364 ACAGAGAATTCCATTACCAACAGAT 58.275 36.000 0.65 0.00 0.00 2.90
2731 3564 3.648339 AATTACCACTTGTGCAAGCAG 57.352 42.857 11.43 6.14 41.99 4.24
2735 3568 1.134098 ACCACTTGTGCAAGCAGTACT 60.134 47.619 11.43 0.00 41.99 2.73
2736 3569 2.104111 ACCACTTGTGCAAGCAGTACTA 59.896 45.455 11.43 0.00 41.99 1.82
2738 3571 3.372206 CCACTTGTGCAAGCAGTACTATC 59.628 47.826 11.43 0.00 41.99 2.08
2739 3572 3.996363 CACTTGTGCAAGCAGTACTATCA 59.004 43.478 11.43 0.00 41.99 2.15
2740 3573 4.633126 CACTTGTGCAAGCAGTACTATCAT 59.367 41.667 11.43 0.00 41.99 2.45
2741 3574 4.633126 ACTTGTGCAAGCAGTACTATCATG 59.367 41.667 11.43 0.00 41.99 3.07
2742 3575 4.206477 TGTGCAAGCAGTACTATCATGT 57.794 40.909 0.00 0.00 33.54 3.21
2743 3576 5.337578 TGTGCAAGCAGTACTATCATGTA 57.662 39.130 0.00 0.00 33.54 2.29
2791 5152 4.523083 TGGTTTTAAAGCTGACTGACACT 58.477 39.130 8.37 0.00 0.00 3.55
2793 5154 4.574828 GGTTTTAAAGCTGACTGACACTCA 59.425 41.667 1.91 0.00 0.00 3.41
2834 5196 9.534565 TTATTACAGAATGATGAGAAGTACTGC 57.465 33.333 0.00 0.00 39.69 4.40
2990 5355 6.675413 ACTTACAGGAGTTGTGTACCATTA 57.325 37.500 0.00 0.00 41.10 1.90
3092 5466 2.803203 GCATGATGCATCACCCTGT 58.197 52.632 30.92 12.74 44.26 4.00
3093 5467 1.108776 GCATGATGCATCACCCTGTT 58.891 50.000 30.92 11.96 44.26 3.16
3146 5520 6.528072 GGTTCTTACTTACAAAGATTGCATGC 59.472 38.462 11.82 11.82 33.17 4.06
3233 5644 5.514274 AAAAATTGTTGAGGAAGCGAGAA 57.486 34.783 0.00 0.00 0.00 2.87
3234 5645 5.712152 AAAATTGTTGAGGAAGCGAGAAT 57.288 34.783 0.00 0.00 0.00 2.40
3441 5880 6.308015 TGAAAGCTGCTTATCTACCCTTAA 57.692 37.500 16.31 0.00 0.00 1.85
3503 5947 7.548097 ACATGATTGTCACTAATCGACTAGTT 58.452 34.615 3.32 0.00 39.39 2.24
3576 6022 2.754472 TGATGTCTTGACGTTGTCCAG 58.246 47.619 0.00 0.00 0.00 3.86
3934 6386 0.958091 TGTGCCTTGGGTTGAATTCG 59.042 50.000 0.04 0.00 0.00 3.34
4010 6462 0.893270 CACAGCACCGGAATTTCCCA 60.893 55.000 9.46 0.00 31.13 4.37
4013 6465 0.404040 AGCACCGGAATTTCCCAGAA 59.596 50.000 9.46 0.00 31.13 3.02
4016 6468 0.958876 ACCGGAATTTCCCAGAACGC 60.959 55.000 9.46 0.00 31.13 4.84
4249 6836 5.362263 TGGCCTACTAAATGAACCGATAAC 58.638 41.667 3.32 0.00 0.00 1.89
4281 6868 2.656560 AGAGACAACGGCACTACATC 57.343 50.000 0.00 0.00 0.00 3.06
4283 6870 1.993370 GAGACAACGGCACTACATCAC 59.007 52.381 0.00 0.00 0.00 3.06
4289 6876 3.454371 ACGGCACTACATCACTAATCC 57.546 47.619 0.00 0.00 0.00 3.01
4337 6924 1.416401 GGAGCGACCTTATTGATCCCA 59.584 52.381 0.00 0.00 40.99 4.37
4340 6927 2.238646 AGCGACCTTATTGATCCCAACA 59.761 45.455 0.00 0.00 34.72 3.33
4407 6994 7.383300 GGAAGTTGATGTTCAAAGAATTCTTGG 59.617 37.037 21.15 18.23 38.22 3.61
4408 6995 6.752168 AGTTGATGTTCAAAGAATTCTTGGG 58.248 36.000 21.15 15.88 38.22 4.12
4409 6996 5.726980 TGATGTTCAAAGAATTCTTGGGG 57.273 39.130 21.15 13.57 36.12 4.96
4410 6997 4.021192 TGATGTTCAAAGAATTCTTGGGGC 60.021 41.667 21.15 14.03 36.12 5.80
4411 6998 3.575805 TGTTCAAAGAATTCTTGGGGCT 58.424 40.909 21.15 2.44 36.12 5.19
4412 6999 3.966665 TGTTCAAAGAATTCTTGGGGCTT 59.033 39.130 21.15 1.68 36.12 4.35
4413 7000 4.202243 TGTTCAAAGAATTCTTGGGGCTTG 60.202 41.667 21.15 14.01 36.12 4.01
4414 7001 2.899256 TCAAAGAATTCTTGGGGCTTGG 59.101 45.455 21.15 4.70 36.12 3.61
4415 7002 2.899256 CAAAGAATTCTTGGGGCTTGGA 59.101 45.455 21.15 0.00 36.12 3.53
4416 7003 2.999185 AGAATTCTTGGGGCTTGGAA 57.001 45.000 0.88 0.00 0.00 3.53
4417 7004 2.529632 AGAATTCTTGGGGCTTGGAAC 58.470 47.619 0.88 0.00 0.00 3.62
4418 7005 1.550524 GAATTCTTGGGGCTTGGAACC 59.449 52.381 0.00 0.00 0.00 3.62
4419 7006 0.786435 ATTCTTGGGGCTTGGAACCT 59.214 50.000 0.00 0.00 0.00 3.50
4445 7048 1.211703 TGTTGCTTGGAACCTGACTCA 59.788 47.619 2.74 0.00 0.00 3.41
4465 7068 4.065088 TCATACAACCACTTTCTCTGTGC 58.935 43.478 0.00 0.00 34.38 4.57
4495 7098 7.177921 CAGCATATTATGTTGAATGGGAAGGAT 59.822 37.037 13.51 0.00 43.17 3.24
4497 7100 9.193806 GCATATTATGTTGAATGGGAAGGATAT 57.806 33.333 5.60 0.00 0.00 1.63
4523 7126 3.128068 GGCCAAAGGTTAAACATAGGTCG 59.872 47.826 0.00 0.00 0.00 4.79
4524 7127 3.427098 GCCAAAGGTTAAACATAGGTCGC 60.427 47.826 0.00 0.00 0.00 5.19
4525 7128 3.754323 CCAAAGGTTAAACATAGGTCGCA 59.246 43.478 0.00 0.00 0.00 5.10
4526 7129 4.216687 CCAAAGGTTAAACATAGGTCGCAA 59.783 41.667 0.00 0.00 0.00 4.85
4527 7130 5.105917 CCAAAGGTTAAACATAGGTCGCAAT 60.106 40.000 0.00 0.00 0.00 3.56
4528 7131 6.094325 CCAAAGGTTAAACATAGGTCGCAATA 59.906 38.462 0.00 0.00 0.00 1.90
4529 7132 6.673154 AAGGTTAAACATAGGTCGCAATAC 57.327 37.500 0.00 0.00 0.00 1.89
4530 7133 5.121105 AGGTTAAACATAGGTCGCAATACC 58.879 41.667 0.00 0.00 40.06 2.73
4531 7134 4.877251 GGTTAAACATAGGTCGCAATACCA 59.123 41.667 3.01 0.00 42.40 3.25
4532 7135 5.529800 GGTTAAACATAGGTCGCAATACCAT 59.470 40.000 3.01 0.00 42.40 3.55
4533 7136 6.427150 GTTAAACATAGGTCGCAATACCATG 58.573 40.000 3.01 6.68 42.40 3.66
4534 7137 2.494059 ACATAGGTCGCAATACCATGC 58.506 47.619 3.01 0.00 42.40 4.06
4535 7138 2.158827 ACATAGGTCGCAATACCATGCA 60.159 45.455 0.00 0.00 46.76 3.96
4536 7139 2.238942 TAGGTCGCAATACCATGCAG 57.761 50.000 0.00 0.00 46.76 4.41
4537 7140 0.464373 AGGTCGCAATACCATGCAGG 60.464 55.000 0.00 0.00 46.76 4.85
4538 7141 1.356624 GTCGCAATACCATGCAGGC 59.643 57.895 0.00 0.00 46.76 4.85
4539 7142 2.179547 TCGCAATACCATGCAGGCG 61.180 57.895 0.00 0.00 46.76 5.52
4540 7143 2.723746 GCAATACCATGCAGGCGG 59.276 61.111 0.00 0.00 45.70 6.13
4541 7144 2.120909 GCAATACCATGCAGGCGGT 61.121 57.895 9.88 9.88 45.70 5.68
4542 7145 1.729276 CAATACCATGCAGGCGGTG 59.271 57.895 13.94 0.00 43.14 4.94
4543 7146 1.453745 AATACCATGCAGGCGGTGG 60.454 57.895 13.94 8.44 43.14 4.61
4545 7148 2.210144 ATACCATGCAGGCGGTGGTT 62.210 55.000 21.10 10.24 43.44 3.67
4546 7149 3.751246 CCATGCAGGCGGTGGTTG 61.751 66.667 0.00 0.00 0.00 3.77
4547 7150 4.424566 CATGCAGGCGGTGGTTGC 62.425 66.667 0.00 0.00 38.30 4.17
4554 7157 4.456806 GCGGTGGTTGCCCTATAG 57.543 61.111 0.00 0.00 0.00 1.31
4555 7158 1.227853 GCGGTGGTTGCCCTATAGG 60.228 63.158 12.27 12.27 39.47 2.57
4556 7159 1.692173 GCGGTGGTTGCCCTATAGGA 61.692 60.000 21.07 0.00 38.24 2.94
4557 7160 0.834612 CGGTGGTTGCCCTATAGGAA 59.165 55.000 21.07 4.50 38.24 3.36
4558 7161 1.474498 CGGTGGTTGCCCTATAGGAAC 60.474 57.143 21.07 16.28 38.24 3.62
4559 7162 1.844497 GGTGGTTGCCCTATAGGAACT 59.156 52.381 21.07 0.00 46.37 3.01
4560 7163 2.158798 GGTGGTTGCCCTATAGGAACTC 60.159 54.545 21.07 13.13 41.75 3.01
4561 7164 2.504175 GTGGTTGCCCTATAGGAACTCA 59.496 50.000 21.07 13.37 41.75 3.41
4562 7165 2.504175 TGGTTGCCCTATAGGAACTCAC 59.496 50.000 21.07 11.75 41.75 3.51
4563 7166 2.772515 GGTTGCCCTATAGGAACTCACT 59.227 50.000 21.07 0.00 41.75 3.41
4564 7167 3.200165 GGTTGCCCTATAGGAACTCACTT 59.800 47.826 21.07 0.00 41.75 3.16
4565 7168 4.192317 GTTGCCCTATAGGAACTCACTTG 58.808 47.826 21.07 0.93 41.75 3.16
4566 7169 2.170607 TGCCCTATAGGAACTCACTTGC 59.829 50.000 21.07 11.62 41.75 4.01
4567 7170 2.803492 GCCCTATAGGAACTCACTTGCG 60.803 54.545 21.07 0.00 41.75 4.85
4568 7171 2.431057 CCCTATAGGAACTCACTTGCGT 59.569 50.000 21.07 0.00 41.75 5.24
4569 7172 3.448686 CCTATAGGAACTCACTTGCGTG 58.551 50.000 14.11 0.00 41.75 5.34
4570 7173 1.726853 ATAGGAACTCACTTGCGTGC 58.273 50.000 0.00 0.00 41.75 5.34
4571 7174 0.666274 TAGGAACTCACTTGCGTGCG 60.666 55.000 0.00 0.00 41.75 5.34
4572 7175 2.551270 GAACTCACTTGCGTGCGG 59.449 61.111 0.00 0.00 40.99 5.69
4573 7176 3.579626 GAACTCACTTGCGTGCGGC 62.580 63.158 0.00 0.00 40.99 6.53
4582 7185 4.299316 GCGTGCGGCGATTCCATC 62.299 66.667 12.98 0.00 44.77 3.51
4583 7186 2.586079 CGTGCGGCGATTCCATCT 60.586 61.111 12.98 0.00 44.77 2.90
4584 7187 1.299850 CGTGCGGCGATTCCATCTA 60.300 57.895 12.98 0.00 44.77 1.98
4585 7188 0.667487 CGTGCGGCGATTCCATCTAT 60.667 55.000 12.98 0.00 44.77 1.98
4586 7189 0.792640 GTGCGGCGATTCCATCTATG 59.207 55.000 12.98 0.00 34.01 2.23
4595 7198 2.515398 CCATCTATGGGCCCGCAA 59.485 61.111 19.37 0.00 44.31 4.85
4596 7199 1.601759 CCATCTATGGGCCCGCAAG 60.602 63.158 19.37 14.41 44.31 4.01
4608 7211 2.579201 CGCAAGGTCGTCCTCCAT 59.421 61.111 0.46 0.00 44.35 3.41
4609 7212 1.519455 CGCAAGGTCGTCCTCCATC 60.519 63.158 0.46 0.00 44.35 3.51
4610 7213 1.596934 GCAAGGTCGTCCTCCATCA 59.403 57.895 0.46 0.00 44.35 3.07
4611 7214 0.741221 GCAAGGTCGTCCTCCATCAC 60.741 60.000 0.46 0.00 44.35 3.06
4612 7215 0.898320 CAAGGTCGTCCTCCATCACT 59.102 55.000 0.46 0.00 44.35 3.41
4613 7216 1.276421 CAAGGTCGTCCTCCATCACTT 59.724 52.381 0.46 0.00 44.35 3.16
4614 7217 1.645710 AGGTCGTCCTCCATCACTTT 58.354 50.000 0.00 0.00 40.58 2.66
4615 7218 1.276421 AGGTCGTCCTCCATCACTTTG 59.724 52.381 0.00 0.00 40.58 2.77
4616 7219 1.676014 GGTCGTCCTCCATCACTTTGG 60.676 57.143 0.00 0.00 38.18 3.28
4617 7220 0.036388 TCGTCCTCCATCACTTTGGC 60.036 55.000 0.00 0.00 36.66 4.52
4618 7221 1.026718 CGTCCTCCATCACTTTGGCC 61.027 60.000 0.00 0.00 36.66 5.36
4619 7222 0.681243 GTCCTCCATCACTTTGGCCC 60.681 60.000 0.00 0.00 36.66 5.80
4620 7223 1.139498 TCCTCCATCACTTTGGCCCA 61.139 55.000 0.00 0.00 36.66 5.36
4621 7224 0.251742 CCTCCATCACTTTGGCCCAA 60.252 55.000 0.00 0.00 36.66 4.12
4622 7225 0.890683 CTCCATCACTTTGGCCCAAC 59.109 55.000 0.00 0.00 36.66 3.77
4623 7226 0.893270 TCCATCACTTTGGCCCAACG 60.893 55.000 0.00 0.00 36.66 4.10
4624 7227 0.893270 CCATCACTTTGGCCCAACGA 60.893 55.000 7.01 0.00 0.00 3.85
4625 7228 0.523072 CATCACTTTGGCCCAACGAG 59.477 55.000 7.01 0.00 0.00 4.18
4626 7229 0.400213 ATCACTTTGGCCCAACGAGA 59.600 50.000 7.01 4.72 0.00 4.04
4627 7230 0.250295 TCACTTTGGCCCAACGAGAG 60.250 55.000 7.01 0.00 0.00 3.20
4628 7231 0.250295 CACTTTGGCCCAACGAGAGA 60.250 55.000 7.01 0.00 0.00 3.10
4629 7232 0.035458 ACTTTGGCCCAACGAGAGAG 59.965 55.000 7.01 0.00 0.00 3.20
4630 7233 0.321671 CTTTGGCCCAACGAGAGAGA 59.678 55.000 0.00 0.00 0.00 3.10
4631 7234 0.321671 TTTGGCCCAACGAGAGAGAG 59.678 55.000 0.00 0.00 0.00 3.20
4632 7235 1.544825 TTGGCCCAACGAGAGAGAGG 61.545 60.000 0.00 0.00 0.00 3.69
4633 7236 2.185608 GCCCAACGAGAGAGAGGC 59.814 66.667 0.00 0.00 0.00 4.70
4634 7237 2.650116 GCCCAACGAGAGAGAGGCA 61.650 63.158 0.00 0.00 0.00 4.75
4635 7238 1.216710 CCCAACGAGAGAGAGGCAC 59.783 63.158 0.00 0.00 0.00 5.01
4636 7239 1.536073 CCCAACGAGAGAGAGGCACA 61.536 60.000 0.00 0.00 0.00 4.57
4637 7240 0.534412 CCAACGAGAGAGAGGCACAT 59.466 55.000 0.00 0.00 0.00 3.21
4638 7241 1.066573 CCAACGAGAGAGAGGCACATT 60.067 52.381 0.00 0.00 0.00 2.71
4639 7242 2.613977 CCAACGAGAGAGAGGCACATTT 60.614 50.000 0.00 0.00 0.00 2.32
4640 7243 2.376808 ACGAGAGAGAGGCACATTTG 57.623 50.000 0.00 0.00 0.00 2.32
4641 7244 1.895798 ACGAGAGAGAGGCACATTTGA 59.104 47.619 0.00 0.00 0.00 2.69
4642 7245 2.266554 CGAGAGAGAGGCACATTTGAC 58.733 52.381 0.00 0.00 0.00 3.18
4643 7246 2.266554 GAGAGAGAGGCACATTTGACG 58.733 52.381 0.00 0.00 34.93 4.35
4644 7247 1.895798 AGAGAGAGGCACATTTGACGA 59.104 47.619 0.00 0.00 34.93 4.20
4645 7248 2.300152 AGAGAGAGGCACATTTGACGAA 59.700 45.455 0.00 0.00 34.93 3.85
4646 7249 2.413453 GAGAGAGGCACATTTGACGAAC 59.587 50.000 0.00 0.00 34.93 3.95
4647 7250 2.143122 GAGAGGCACATTTGACGAACA 58.857 47.619 0.00 0.00 34.93 3.18
4648 7251 2.548057 GAGAGGCACATTTGACGAACAA 59.452 45.455 0.00 0.00 34.93 2.83
4649 7252 2.549754 AGAGGCACATTTGACGAACAAG 59.450 45.455 0.00 0.00 39.77 3.16
4650 7253 1.608590 AGGCACATTTGACGAACAAGG 59.391 47.619 0.00 0.00 39.77 3.61
4651 7254 1.606668 GGCACATTTGACGAACAAGGA 59.393 47.619 0.00 0.00 39.77 3.36
4652 7255 2.350772 GGCACATTTGACGAACAAGGAG 60.351 50.000 0.00 0.00 39.77 3.69
4653 7256 2.350772 GCACATTTGACGAACAAGGAGG 60.351 50.000 0.00 0.00 39.77 4.30
4654 7257 3.138304 CACATTTGACGAACAAGGAGGA 58.862 45.455 0.00 0.00 39.77 3.71
4655 7258 3.753272 CACATTTGACGAACAAGGAGGAT 59.247 43.478 0.00 0.00 39.77 3.24
4656 7259 4.216257 CACATTTGACGAACAAGGAGGATT 59.784 41.667 0.00 0.00 39.77 3.01
4657 7260 5.411361 CACATTTGACGAACAAGGAGGATTA 59.589 40.000 0.00 0.00 39.77 1.75
4658 7261 6.001460 ACATTTGACGAACAAGGAGGATTAA 58.999 36.000 0.00 0.00 39.77 1.40
4659 7262 6.659242 ACATTTGACGAACAAGGAGGATTAAT 59.341 34.615 0.00 0.00 39.77 1.40
4660 7263 7.176690 ACATTTGACGAACAAGGAGGATTAATT 59.823 33.333 0.00 0.00 39.77 1.40
4661 7264 6.737254 TTGACGAACAAGGAGGATTAATTC 57.263 37.500 0.00 0.00 34.20 2.17
4662 7265 6.049955 TGACGAACAAGGAGGATTAATTCT 57.950 37.500 0.00 0.00 0.00 2.40
4663 7266 6.472887 TGACGAACAAGGAGGATTAATTCTT 58.527 36.000 0.00 0.00 0.00 2.52
4664 7267 6.940298 TGACGAACAAGGAGGATTAATTCTTT 59.060 34.615 0.00 0.00 0.00 2.52
4665 7268 7.447238 TGACGAACAAGGAGGATTAATTCTTTT 59.553 33.333 0.00 0.00 0.00 2.27
4666 7269 7.593825 ACGAACAAGGAGGATTAATTCTTTTG 58.406 34.615 15.32 15.32 0.00 2.44
4667 7270 7.029563 CGAACAAGGAGGATTAATTCTTTTGG 58.970 38.462 18.69 4.83 0.00 3.28
4668 7271 6.857437 ACAAGGAGGATTAATTCTTTTGGG 57.143 37.500 18.69 5.07 0.00 4.12
4669 7272 5.721480 ACAAGGAGGATTAATTCTTTTGGGG 59.279 40.000 18.69 4.29 0.00 4.96
4670 7273 4.290093 AGGAGGATTAATTCTTTTGGGGC 58.710 43.478 0.00 0.00 0.00 5.80
4671 7274 4.016199 AGGAGGATTAATTCTTTTGGGGCT 60.016 41.667 0.00 0.00 0.00 5.19
4672 7275 4.100035 GGAGGATTAATTCTTTTGGGGCTG 59.900 45.833 0.00 0.00 0.00 4.85
4673 7276 4.687976 AGGATTAATTCTTTTGGGGCTGT 58.312 39.130 0.00 0.00 0.00 4.40
4674 7277 4.467438 AGGATTAATTCTTTTGGGGCTGTG 59.533 41.667 0.00 0.00 0.00 3.66
4675 7278 4.222810 GGATTAATTCTTTTGGGGCTGTGT 59.777 41.667 0.00 0.00 0.00 3.72
4676 7279 5.279960 GGATTAATTCTTTTGGGGCTGTGTT 60.280 40.000 0.00 0.00 0.00 3.32
4677 7280 6.071051 GGATTAATTCTTTTGGGGCTGTGTTA 60.071 38.462 0.00 0.00 0.00 2.41
4678 7281 4.871933 AATTCTTTTGGGGCTGTGTTAG 57.128 40.909 0.00 0.00 0.00 2.34
4679 7282 2.286365 TCTTTTGGGGCTGTGTTAGG 57.714 50.000 0.00 0.00 0.00 2.69
4680 7283 1.203001 TCTTTTGGGGCTGTGTTAGGG 60.203 52.381 0.00 0.00 0.00 3.53
4681 7284 0.558712 TTTTGGGGCTGTGTTAGGGT 59.441 50.000 0.00 0.00 0.00 4.34
4682 7285 1.447099 TTTGGGGCTGTGTTAGGGTA 58.553 50.000 0.00 0.00 0.00 3.69
4683 7286 0.694196 TTGGGGCTGTGTTAGGGTAC 59.306 55.000 0.00 0.00 0.00 3.34
4684 7287 1.219935 GGGGCTGTGTTAGGGTACG 59.780 63.158 0.00 0.00 0.00 3.67
4685 7288 1.259840 GGGGCTGTGTTAGGGTACGA 61.260 60.000 0.00 0.00 0.00 3.43
4686 7289 0.175073 GGGCTGTGTTAGGGTACGAG 59.825 60.000 0.00 0.00 0.00 4.18
4687 7290 0.893447 GGCTGTGTTAGGGTACGAGT 59.107 55.000 0.00 0.00 0.00 4.18
4688 7291 2.094675 GGCTGTGTTAGGGTACGAGTA 58.905 52.381 0.00 0.00 0.00 2.59
4689 7292 2.692041 GGCTGTGTTAGGGTACGAGTAT 59.308 50.000 0.00 0.00 0.00 2.12
4690 7293 3.885297 GGCTGTGTTAGGGTACGAGTATA 59.115 47.826 0.00 0.00 0.00 1.47
4691 7294 4.522022 GGCTGTGTTAGGGTACGAGTATAT 59.478 45.833 0.00 0.00 0.00 0.86
4692 7295 5.707298 GGCTGTGTTAGGGTACGAGTATATA 59.293 44.000 0.00 0.00 0.00 0.86
4693 7296 6.376581 GGCTGTGTTAGGGTACGAGTATATAT 59.623 42.308 0.00 0.00 0.00 0.86
4694 7297 7.554118 GGCTGTGTTAGGGTACGAGTATATATA 59.446 40.741 0.00 0.00 0.00 0.86
4695 7298 9.118300 GCTGTGTTAGGGTACGAGTATATATAT 57.882 37.037 0.00 0.00 0.00 0.86
4715 7318 8.736097 ATATATAGTATGTGTCAAAGTGGGGA 57.264 34.615 0.00 0.00 0.00 4.81
4716 7319 5.975988 ATAGTATGTGTCAAAGTGGGGAT 57.024 39.130 0.00 0.00 0.00 3.85
4717 7320 8.736097 ATATAGTATGTGTCAAAGTGGGGATA 57.264 34.615 0.00 0.00 0.00 2.59
4718 7321 5.359194 AGTATGTGTCAAAGTGGGGATAG 57.641 43.478 0.00 0.00 0.00 2.08
4719 7322 3.652057 ATGTGTCAAAGTGGGGATAGG 57.348 47.619 0.00 0.00 0.00 2.57
4720 7323 2.626785 TGTGTCAAAGTGGGGATAGGA 58.373 47.619 0.00 0.00 0.00 2.94
4721 7324 2.304761 TGTGTCAAAGTGGGGATAGGAC 59.695 50.000 0.00 0.00 0.00 3.85
4722 7325 1.913419 TGTCAAAGTGGGGATAGGACC 59.087 52.381 0.00 0.00 0.00 4.46
4723 7326 1.913419 GTCAAAGTGGGGATAGGACCA 59.087 52.381 0.00 0.00 0.00 4.02
4724 7327 2.307686 GTCAAAGTGGGGATAGGACCAA 59.692 50.000 0.00 0.00 38.73 3.67
4725 7328 2.307686 TCAAAGTGGGGATAGGACCAAC 59.692 50.000 0.00 0.00 38.73 3.77
4726 7329 2.041081 CAAAGTGGGGATAGGACCAACA 59.959 50.000 0.00 0.00 38.73 3.33
4727 7330 2.286935 AGTGGGGATAGGACCAACAT 57.713 50.000 0.00 0.00 38.73 2.71
4728 7331 3.431411 AGTGGGGATAGGACCAACATA 57.569 47.619 0.00 0.00 38.73 2.29
4729 7332 3.954662 AGTGGGGATAGGACCAACATAT 58.045 45.455 0.00 0.00 38.73 1.78
4730 7333 5.101254 AGTGGGGATAGGACCAACATATA 57.899 43.478 0.00 0.00 38.73 0.86
4731 7334 4.844655 AGTGGGGATAGGACCAACATATAC 59.155 45.833 0.00 0.00 38.73 1.47
4732 7335 4.844655 GTGGGGATAGGACCAACATATACT 59.155 45.833 0.00 0.00 38.73 2.12
4733 7336 6.021030 GTGGGGATAGGACCAACATATACTA 58.979 44.000 0.00 0.00 38.73 1.82
4734 7337 6.154706 GTGGGGATAGGACCAACATATACTAG 59.845 46.154 0.00 0.00 38.73 2.57
4735 7338 5.661759 GGGGATAGGACCAACATATACTAGG 59.338 48.000 0.00 0.00 0.00 3.02
4736 7339 6.262207 GGGATAGGACCAACATATACTAGGT 58.738 44.000 0.00 0.00 34.76 3.08
4737 7340 6.154706 GGGATAGGACCAACATATACTAGGTG 59.845 46.154 0.00 0.00 31.57 4.00
4738 7341 6.724905 GGATAGGACCAACATATACTAGGTGT 59.275 42.308 0.00 0.00 31.57 4.16
4739 7342 7.093858 GGATAGGACCAACATATACTAGGTGTC 60.094 44.444 0.00 0.00 31.57 3.67
4740 7343 5.525484 AGGACCAACATATACTAGGTGTCA 58.475 41.667 0.00 0.00 31.57 3.58
4741 7344 5.363005 AGGACCAACATATACTAGGTGTCAC 59.637 44.000 0.00 0.00 31.57 3.67
4742 7345 5.128171 GGACCAACATATACTAGGTGTCACA 59.872 44.000 5.12 0.00 31.57 3.58
4743 7346 5.974108 ACCAACATATACTAGGTGTCACAC 58.026 41.667 0.00 0.00 0.00 3.82
4744 7347 5.482526 ACCAACATATACTAGGTGTCACACA 59.517 40.000 10.85 0.00 35.86 3.72
4745 7348 6.156256 ACCAACATATACTAGGTGTCACACAT 59.844 38.462 10.85 5.02 35.86 3.21
4746 7349 6.479990 CCAACATATACTAGGTGTCACACATG 59.520 42.308 10.85 5.47 35.86 3.21
4747 7350 7.264947 CAACATATACTAGGTGTCACACATGA 58.735 38.462 10.85 0.00 35.86 3.07
4748 7351 7.418337 ACATATACTAGGTGTCACACATGAA 57.582 36.000 10.85 0.00 36.31 2.57
4749 7352 7.265673 ACATATACTAGGTGTCACACATGAAC 58.734 38.462 10.85 0.00 36.31 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.437845 GCATACTGCGGCAATTACG 57.562 52.632 3.44 0.00 31.71 3.18
103 104 0.035176 TGGGGCACTACGTTTACCAC 59.965 55.000 0.00 0.00 0.00 4.16
150 151 7.680113 GCATCACTCAGTTTACTCTAGTAGTCC 60.680 44.444 0.00 0.00 39.80 3.85
152 153 6.659668 TGCATCACTCAGTTTACTCTAGTAGT 59.340 38.462 0.00 0.00 42.62 2.73
203 204 1.937278 TGTGCTGCATTTTGGTTGTG 58.063 45.000 5.27 0.00 0.00 3.33
236 238 3.070590 TGACGATCAGATGCTGGATGAAT 59.929 43.478 0.00 0.00 31.51 2.57
244 246 8.698486 TGAAAATTTCACTGACGATCAGATGCT 61.698 37.037 17.99 0.00 46.84 3.79
290 292 2.357517 GGTGAGGACACGGCACTG 60.358 66.667 0.00 0.00 46.77 3.66
378 380 4.660938 GCCAACCCCAACCTCGCT 62.661 66.667 0.00 0.00 0.00 4.93
747 749 2.045242 TGCTACTCCGCCTCGTCT 60.045 61.111 0.00 0.00 0.00 4.18
749 751 3.827898 GCTGCTACTCCGCCTCGT 61.828 66.667 0.00 0.00 0.00 4.18
818 827 3.842925 TTGACAGCCGAACCCAGCC 62.843 63.158 0.00 0.00 0.00 4.85
819 828 2.281484 TTGACAGCCGAACCCAGC 60.281 61.111 0.00 0.00 0.00 4.85
820 829 1.966451 GGTTGACAGCCGAACCCAG 60.966 63.158 0.00 0.00 36.39 4.45
821 830 2.112297 GGTTGACAGCCGAACCCA 59.888 61.111 0.00 0.00 36.39 4.51
938 951 2.036098 TCCTTCCGTGCCGGTAGA 59.964 61.111 17.56 9.24 45.08 2.59
960 973 1.208706 CCTTTCTCCCCCTCTTCCTC 58.791 60.000 0.00 0.00 0.00 3.71
961 974 0.800239 TCCTTTCTCCCCCTCTTCCT 59.200 55.000 0.00 0.00 0.00 3.36
962 975 1.208706 CTCCTTTCTCCCCCTCTTCC 58.791 60.000 0.00 0.00 0.00 3.46
963 976 1.208706 CCTCCTTTCTCCCCCTCTTC 58.791 60.000 0.00 0.00 0.00 2.87
964 977 0.916845 GCCTCCTTTCTCCCCCTCTT 60.917 60.000 0.00 0.00 0.00 2.85
965 978 1.307430 GCCTCCTTTCTCCCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
1262 1276 2.606587 GGCTGGCTGGAAGGAAGGA 61.607 63.158 0.00 0.00 0.00 3.36
1263 1277 2.044551 GGCTGGCTGGAAGGAAGG 60.045 66.667 0.00 0.00 0.00 3.46
1264 1278 2.437359 CGGCTGGCTGGAAGGAAG 60.437 66.667 0.00 0.00 0.00 3.46
1265 1279 4.033776 CCGGCTGGCTGGAAGGAA 62.034 66.667 14.76 0.00 45.10 3.36
1273 1287 4.021925 GTGGAGAACCGGCTGGCT 62.022 66.667 12.89 0.00 39.70 4.75
1274 1288 4.329545 TGTGGAGAACCGGCTGGC 62.330 66.667 12.89 0.00 39.70 4.85
1306 1320 5.853572 TGTTTTCTCTTAATAGGGTGGGT 57.146 39.130 0.00 0.00 0.00 4.51
1317 1331 7.728083 TCCCAAGATCCATTTTGTTTTCTCTTA 59.272 33.333 0.00 0.00 0.00 2.10
1349 1363 7.713507 CCCAGCATAATCAATCAATCAATGTTT 59.286 33.333 0.00 0.00 0.00 2.83
1354 1368 4.039488 GCCCCAGCATAATCAATCAATCAA 59.961 41.667 0.00 0.00 39.53 2.57
1355 1369 3.575256 GCCCCAGCATAATCAATCAATCA 59.425 43.478 0.00 0.00 39.53 2.57
1356 1370 3.830755 AGCCCCAGCATAATCAATCAATC 59.169 43.478 0.00 0.00 43.56 2.67
1357 1371 3.576982 CAGCCCCAGCATAATCAATCAAT 59.423 43.478 0.00 0.00 43.56 2.57
1358 1372 2.960384 CAGCCCCAGCATAATCAATCAA 59.040 45.455 0.00 0.00 43.56 2.57
1416 1430 3.491342 TGGCTAGGAGCTAGTACATCTG 58.509 50.000 0.00 0.00 41.99 2.90
1492 1524 6.319152 TGTTCTTCTGTTCCAACCGAAATTAA 59.681 34.615 0.00 0.00 32.90 1.40
1493 1525 5.823570 TGTTCTTCTGTTCCAACCGAAATTA 59.176 36.000 0.00 0.00 32.90 1.40
1494 1526 4.642885 TGTTCTTCTGTTCCAACCGAAATT 59.357 37.500 0.00 0.00 32.90 1.82
1495 1527 4.204012 TGTTCTTCTGTTCCAACCGAAAT 58.796 39.130 0.00 0.00 32.90 2.17
1496 1528 3.611970 TGTTCTTCTGTTCCAACCGAAA 58.388 40.909 0.00 0.00 32.90 3.46
1497 1529 3.269538 TGTTCTTCTGTTCCAACCGAA 57.730 42.857 0.00 0.00 32.44 4.30
1498 1530 2.992124 TGTTCTTCTGTTCCAACCGA 57.008 45.000 0.00 0.00 0.00 4.69
1499 1531 3.363970 CGAATGTTCTTCTGTTCCAACCG 60.364 47.826 0.00 0.00 0.00 4.44
1500 1532 3.813166 TCGAATGTTCTTCTGTTCCAACC 59.187 43.478 0.00 0.00 0.00 3.77
1501 1533 4.611581 GCTCGAATGTTCTTCTGTTCCAAC 60.612 45.833 0.00 0.00 0.00 3.77
1502 1534 3.498397 GCTCGAATGTTCTTCTGTTCCAA 59.502 43.478 0.00 0.00 0.00 3.53
1503 1535 3.067106 GCTCGAATGTTCTTCTGTTCCA 58.933 45.455 0.00 0.00 0.00 3.53
1504 1536 2.416893 GGCTCGAATGTTCTTCTGTTCC 59.583 50.000 0.00 0.00 0.00 3.62
1505 1537 2.416893 GGGCTCGAATGTTCTTCTGTTC 59.583 50.000 0.00 0.00 0.00 3.18
1540 1572 9.098355 CGGACTAATTGTGATCTTTCTCATAAA 57.902 33.333 0.00 0.00 31.30 1.40
1545 1577 6.369065 ACAACGGACTAATTGTGATCTTTCTC 59.631 38.462 0.00 0.00 37.64 2.87
1552 1584 5.242434 TGCTTACAACGGACTAATTGTGAT 58.758 37.500 0.00 0.00 39.36 3.06
1558 1591 4.060205 ACGTTTGCTTACAACGGACTAAT 58.940 39.130 9.74 0.00 34.87 1.73
1571 1604 3.317993 ACTCAAAATGCCTACGTTTGCTT 59.682 39.130 0.00 0.00 35.18 3.91
1575 1608 4.385825 TCTGACTCAAAATGCCTACGTTT 58.614 39.130 0.00 0.00 36.55 3.60
1609 1642 1.339151 GGGCACTAGAGGTTCTGGTTG 60.339 57.143 0.00 0.00 35.96 3.77
1670 1713 5.499139 AACAACATCACAAGTTTCGACAT 57.501 34.783 0.00 0.00 0.00 3.06
1674 1717 8.829514 TTAAACTAACAACATCACAAGTTTCG 57.170 30.769 1.86 0.00 38.00 3.46
1738 1788 9.778741 CTTGGCTGGAACATATAGAGTATAAAA 57.221 33.333 0.00 0.00 38.20 1.52
1739 1789 8.934697 ACTTGGCTGGAACATATAGAGTATAAA 58.065 33.333 0.00 0.00 38.20 1.40
1763 1813 2.034558 CGTTCTTCATGCCAACCAAACT 59.965 45.455 0.00 0.00 0.00 2.66
1782 1832 6.978674 TCATAATTATCTGGAGGTTCTCGT 57.021 37.500 0.00 0.00 0.00 4.18
1783 1833 9.929180 TTTATCATAATTATCTGGAGGTTCTCG 57.071 33.333 0.00 0.00 0.00 4.04
1786 1836 8.951243 GCCTTTATCATAATTATCTGGAGGTTC 58.049 37.037 0.00 0.00 0.00 3.62
1787 1837 7.890655 GGCCTTTATCATAATTATCTGGAGGTT 59.109 37.037 0.00 0.00 0.00 3.50
1788 1838 7.406104 GGCCTTTATCATAATTATCTGGAGGT 58.594 38.462 0.00 0.00 0.00 3.85
1790 1840 6.037610 GCGGCCTTTATCATAATTATCTGGAG 59.962 42.308 0.00 0.00 0.00 3.86
1804 1854 5.629079 ATTTAGCTTATGCGGCCTTTATC 57.371 39.130 0.00 0.00 45.42 1.75
1813 1863 8.749841 ACACTTCTATCTATTTAGCTTATGCG 57.250 34.615 0.00 0.00 45.42 4.73
1826 1888 7.674348 TCCTTCTCCAAAGAACACTTCTATCTA 59.326 37.037 0.00 0.00 39.61 1.98
1828 1890 6.702329 TCCTTCTCCAAAGAACACTTCTATC 58.298 40.000 0.00 0.00 39.61 2.08
1839 1901 1.958288 CCCTCCTCCTTCTCCAAAGA 58.042 55.000 0.00 0.00 0.00 2.52
1840 1902 0.254462 GCCCTCCTCCTTCTCCAAAG 59.746 60.000 0.00 0.00 0.00 2.77
1855 1917 0.606401 CTTGACCGACAACATGCCCT 60.606 55.000 0.00 0.00 34.56 5.19
1856 1918 1.586154 CCTTGACCGACAACATGCCC 61.586 60.000 0.00 0.00 34.56 5.36
1857 1919 1.586154 CCCTTGACCGACAACATGCC 61.586 60.000 0.00 0.00 34.56 4.40
1862 1924 1.905637 ATTTCCCCTTGACCGACAAC 58.094 50.000 0.00 0.00 34.56 3.32
1870 1932 6.434028 CACAAAAGATCTGTATTTCCCCTTGA 59.566 38.462 0.00 0.00 0.00 3.02
1871 1933 6.624423 CACAAAAGATCTGTATTTCCCCTTG 58.376 40.000 0.00 0.00 0.00 3.61
1872 1934 5.185828 GCACAAAAGATCTGTATTTCCCCTT 59.814 40.000 0.00 0.00 0.00 3.95
1909 1971 7.413657 GCGGCAACTCAAACATAATACTAGAAA 60.414 37.037 0.00 0.00 0.00 2.52
1917 1979 3.574614 GTTGCGGCAACTCAAACATAAT 58.425 40.909 32.48 0.00 44.07 1.28
1934 1997 0.784778 CGAGACAGAGAAACCGTTGC 59.215 55.000 0.00 0.00 0.00 4.17
1935 1998 0.784778 GCGAGACAGAGAAACCGTTG 59.215 55.000 0.00 0.00 0.00 4.10
1937 2000 0.603569 ATGCGAGACAGAGAAACCGT 59.396 50.000 0.00 0.00 0.00 4.83
1949 2012 2.884639 TCCAGAACATATCGATGCGAGA 59.115 45.455 8.54 0.00 39.91 4.04
1953 2016 3.681897 GGTGATCCAGAACATATCGATGC 59.318 47.826 8.54 0.00 36.43 3.91
1958 2021 6.016777 GGTCATTTGGTGATCCAGAACATATC 60.017 42.308 0.00 0.00 45.22 1.63
1959 2022 5.829924 GGTCATTTGGTGATCCAGAACATAT 59.170 40.000 0.00 0.00 45.22 1.78
1966 2029 3.689347 TCAAGGTCATTTGGTGATCCAG 58.311 45.455 0.00 0.00 45.22 3.86
1988 2051 6.406692 TCTATAGCACAAAGATAGGACACC 57.593 41.667 0.00 0.00 0.00 4.16
2007 2077 5.501156 CCAGTAGGAAACTTTGGCTTCTAT 58.499 41.667 0.00 0.00 43.67 1.98
2031 2101 6.769822 TGCTAGAGAAGGATCAATTTCCAATC 59.230 38.462 0.00 0.00 38.32 2.67
2051 2121 4.215349 GCCAGTGCTTCCTGCTAG 57.785 61.111 0.00 0.00 43.37 3.42
2064 2134 4.527816 AGATTAAGATAGGAGCAGAGCCAG 59.472 45.833 0.00 0.00 0.00 4.85
2083 2153 9.129532 GTACACCCACACTAGTACTATAAGATT 57.870 37.037 2.33 0.00 35.24 2.40
2092 2162 4.330250 TGAGAGTACACCCACACTAGTAC 58.670 47.826 0.00 0.00 37.65 2.73
2095 2165 4.079970 TCTTGAGAGTACACCCACACTAG 58.920 47.826 0.00 0.00 0.00 2.57
2096 2166 4.108501 TCTTGAGAGTACACCCACACTA 57.891 45.455 0.00 0.00 0.00 2.74
2097 2167 2.958818 TCTTGAGAGTACACCCACACT 58.041 47.619 0.00 0.00 0.00 3.55
2098 2168 3.963428 ATCTTGAGAGTACACCCACAC 57.037 47.619 0.00 0.00 0.00 3.82
2099 2169 3.646162 ACAATCTTGAGAGTACACCCACA 59.354 43.478 0.00 0.00 0.00 4.17
2103 2173 7.907214 ATGTTTACAATCTTGAGAGTACACC 57.093 36.000 0.00 0.00 0.00 4.16
2114 2184 9.912634 CACAATTCTACCAATGTTTACAATCTT 57.087 29.630 0.00 0.00 0.00 2.40
2120 2190 8.138712 TGGAAACACAATTCTACCAATGTTTAC 58.861 33.333 3.45 3.45 39.63 2.01
2122 2192 7.118496 TGGAAACACAATTCTACCAATGTTT 57.882 32.000 0.00 0.00 41.60 2.83
2158 2228 3.270027 TGGGCGACTGTAGAAATGAATG 58.730 45.455 0.00 0.00 0.00 2.67
2168 2238 3.627395 AGATGATTTTGGGCGACTGTA 57.373 42.857 0.00 0.00 0.00 2.74
2170 2240 2.614057 GGTAGATGATTTTGGGCGACTG 59.386 50.000 0.00 0.00 0.00 3.51
2172 2242 2.919228 AGGTAGATGATTTTGGGCGAC 58.081 47.619 0.00 0.00 0.00 5.19
2174 2244 3.181487 CCAAAGGTAGATGATTTTGGGCG 60.181 47.826 6.89 0.00 43.59 6.13
2189 2259 6.719370 TCATTAGTCAAATAGCAACCAAAGGT 59.281 34.615 0.00 0.00 37.65 3.50
2195 3014 6.374333 TCCTTGTCATTAGTCAAATAGCAACC 59.626 38.462 0.00 0.00 0.00 3.77
2200 3019 7.607991 ACCAACTCCTTGTCATTAGTCAAATAG 59.392 37.037 0.00 0.00 0.00 1.73
2202 3021 6.306987 ACCAACTCCTTGTCATTAGTCAAAT 58.693 36.000 0.00 0.00 0.00 2.32
2221 3040 5.479306 TCTGTCTCAAGCTGTAATACCAAC 58.521 41.667 0.00 0.00 0.00 3.77
2227 3046 7.559486 TCATGTAATCTGTCTCAAGCTGTAAT 58.441 34.615 0.00 0.00 0.00 1.89
2230 3049 5.411831 TCATGTAATCTGTCTCAAGCTGT 57.588 39.130 0.00 0.00 0.00 4.40
2233 3052 6.974932 TCTTTCATGTAATCTGTCTCAAGC 57.025 37.500 0.00 0.00 0.00 4.01
2245 3064 7.125811 AGGGAGTAGCATAGTTCTTTCATGTAA 59.874 37.037 0.00 0.00 0.00 2.41
2273 3092 0.450983 GAACTACTCCCTCCGTCACG 59.549 60.000 0.00 0.00 0.00 4.35
2274 3093 1.542492 TGAACTACTCCCTCCGTCAC 58.458 55.000 0.00 0.00 0.00 3.67
2275 3094 2.526888 ATGAACTACTCCCTCCGTCA 57.473 50.000 0.00 0.00 0.00 4.35
2276 3095 6.837471 AATATATGAACTACTCCCTCCGTC 57.163 41.667 0.00 0.00 0.00 4.79
2277 3096 7.236529 TGTAATATATGAACTACTCCCTCCGT 58.763 38.462 0.00 0.00 0.00 4.69
2278 3097 7.698506 TGTAATATATGAACTACTCCCTCCG 57.301 40.000 0.00 0.00 0.00 4.63
2316 3135 3.732048 TTGGAAATAGGGGTTCTGACC 57.268 47.619 0.00 0.00 45.75 4.02
2324 3150 4.592997 AGAAGGAGTTTGGAAATAGGGG 57.407 45.455 0.00 0.00 0.00 4.79
2327 3153 6.261826 CCATGCTAGAAGGAGTTTGGAAATAG 59.738 42.308 0.00 0.00 0.00 1.73
2328 3154 6.122277 CCATGCTAGAAGGAGTTTGGAAATA 58.878 40.000 0.00 0.00 0.00 1.40
2330 3156 4.202567 ACCATGCTAGAAGGAGTTTGGAAA 60.203 41.667 0.00 0.00 0.00 3.13
2331 3157 3.330701 ACCATGCTAGAAGGAGTTTGGAA 59.669 43.478 0.00 0.00 0.00 3.53
2334 3160 5.882557 ACAATACCATGCTAGAAGGAGTTTG 59.117 40.000 0.00 2.13 0.00 2.93
2335 3161 6.067217 ACAATACCATGCTAGAAGGAGTTT 57.933 37.500 0.00 0.00 0.00 2.66
2351 3177 7.615582 TCAATTGAGATGACAGAACAATACC 57.384 36.000 3.38 0.00 32.15 2.73
2355 3181 7.446319 AGTCAATCAATTGAGATGACAGAACAA 59.554 33.333 34.96 13.10 46.44 2.83
2356 3182 6.938596 AGTCAATCAATTGAGATGACAGAACA 59.061 34.615 34.96 13.60 46.44 3.18
2365 3191 9.690913 TCAAATAAGGAGTCAATCAATTGAGAT 57.309 29.630 14.54 2.46 46.44 2.75
2368 3194 9.076781 TGTTCAAATAAGGAGTCAATCAATTGA 57.923 29.630 11.26 11.26 43.94 2.57
2377 3203 6.294675 CCAAGCAATGTTCAAATAAGGAGTCA 60.295 38.462 0.00 0.00 0.00 3.41
2397 3223 0.243636 CCGGGTCACATTTTCCAAGC 59.756 55.000 0.00 0.00 0.00 4.01
2400 3226 2.235016 CTTTCCGGGTCACATTTTCCA 58.765 47.619 0.00 0.00 0.00 3.53
2401 3227 2.030274 CACTTTCCGGGTCACATTTTCC 60.030 50.000 0.00 0.00 0.00 3.13
2402 3228 2.030274 CCACTTTCCGGGTCACATTTTC 60.030 50.000 0.00 0.00 0.00 2.29
2403 3229 1.960689 CCACTTTCCGGGTCACATTTT 59.039 47.619 0.00 0.00 0.00 1.82
2404 3230 1.133606 ACCACTTTCCGGGTCACATTT 60.134 47.619 0.00 0.00 29.34 2.32
2405 3231 0.476771 ACCACTTTCCGGGTCACATT 59.523 50.000 0.00 0.00 29.34 2.71
2406 3232 2.151369 ACCACTTTCCGGGTCACAT 58.849 52.632 0.00 0.00 29.34 3.21
2407 3233 3.650023 ACCACTTTCCGGGTCACA 58.350 55.556 0.00 0.00 29.34 3.58
2411 3237 1.052124 TGTCTGACCACTTTCCGGGT 61.052 55.000 0.00 0.00 40.96 5.28
2412 3238 0.320771 CTGTCTGACCACTTTCCGGG 60.321 60.000 0.00 0.00 0.00 5.73
2413 3239 0.393077 ACTGTCTGACCACTTTCCGG 59.607 55.000 5.17 0.00 0.00 5.14
2414 3240 1.867233 CAACTGTCTGACCACTTTCCG 59.133 52.381 5.17 0.00 0.00 4.30
2415 3241 2.919228 ACAACTGTCTGACCACTTTCC 58.081 47.619 5.17 0.00 0.00 3.13
2416 3242 5.297547 TGATACAACTGTCTGACCACTTTC 58.702 41.667 5.17 0.00 0.00 2.62
2417 3243 5.290493 TGATACAACTGTCTGACCACTTT 57.710 39.130 5.17 0.00 0.00 2.66
2418 3244 4.955811 TGATACAACTGTCTGACCACTT 57.044 40.909 5.17 0.00 0.00 3.16
2419 3245 4.955811 TTGATACAACTGTCTGACCACT 57.044 40.909 5.17 0.00 0.00 4.00
2420 3246 5.057149 AGTTTGATACAACTGTCTGACCAC 58.943 41.667 5.17 0.00 0.00 4.16
2446 3272 8.461249 AGTACAACTACAAGTCTAACAGAAGA 57.539 34.615 0.00 0.00 0.00 2.87
2452 3278 8.697960 GCAGTTTAGTACAACTACAAGTCTAAC 58.302 37.037 0.00 0.00 35.10 2.34
2455 3281 7.052142 AGCAGTTTAGTACAACTACAAGTCT 57.948 36.000 0.00 0.00 35.10 3.24
2505 3331 5.808042 ACACTGTTATGTGATCATGAAGC 57.192 39.130 0.00 0.00 40.12 3.86
2615 3447 7.606456 TCTGTTGGTAATGGAATTCTCTGTAAC 59.394 37.037 5.23 4.07 37.87 2.50
2641 3473 3.748083 CAGCAGGCCATAGTCAACATAT 58.252 45.455 5.01 0.00 0.00 1.78
2642 3474 2.746142 GCAGCAGGCCATAGTCAACATA 60.746 50.000 5.01 0.00 36.11 2.29
2655 3488 0.972471 ATACAAAAGGGGCAGCAGGC 60.972 55.000 0.00 0.00 43.74 4.85
2731 3564 8.786898 ACATGCCATTTCATTACATGATAGTAC 58.213 33.333 0.00 0.00 40.39 2.73
2810 5172 7.710044 CAGCAGTACTTCTCATCATTCTGTAAT 59.290 37.037 0.00 0.00 0.00 1.89
2814 5176 4.270566 GCAGCAGTACTTCTCATCATTCTG 59.729 45.833 0.00 0.00 0.00 3.02
2834 5196 1.639298 GGTAGCCAGTTTCGCTGCAG 61.639 60.000 10.11 10.11 43.71 4.41
2990 5355 8.172741 AGAATAGATAGCTTCTCTTCATCCTCT 58.827 37.037 17.76 5.04 39.08 3.69
3115 5489 9.965824 CAATCTTTGTAAGTAAGAACCAAATGT 57.034 29.630 0.00 0.00 35.43 2.71
3217 5628 3.685139 AAGATTCTCGCTTCCTCAACA 57.315 42.857 0.00 0.00 0.00 3.33
3218 5629 4.214332 ACAAAAGATTCTCGCTTCCTCAAC 59.786 41.667 0.00 0.00 0.00 3.18
3219 5630 4.389374 ACAAAAGATTCTCGCTTCCTCAA 58.611 39.130 0.00 0.00 0.00 3.02
3220 5631 4.008074 ACAAAAGATTCTCGCTTCCTCA 57.992 40.909 0.00 0.00 0.00 3.86
3221 5632 5.446607 GCTTACAAAAGATTCTCGCTTCCTC 60.447 44.000 0.00 0.00 34.37 3.71
3222 5633 4.393371 GCTTACAAAAGATTCTCGCTTCCT 59.607 41.667 0.00 0.00 34.37 3.36
3223 5634 4.393371 AGCTTACAAAAGATTCTCGCTTCC 59.607 41.667 0.00 0.00 34.37 3.46
3224 5635 5.538067 AGCTTACAAAAGATTCTCGCTTC 57.462 39.130 0.00 0.00 34.37 3.86
3225 5636 5.948992 AAGCTTACAAAAGATTCTCGCTT 57.051 34.783 0.00 0.00 36.64 4.68
3232 5643 9.521503 GTTTTGAAGAGAAGCTTACAAAAGATT 57.478 29.630 18.69 0.00 43.81 2.40
3233 5644 8.907885 AGTTTTGAAGAGAAGCTTACAAAAGAT 58.092 29.630 18.69 12.54 40.29 2.40
3234 5645 8.184192 CAGTTTTGAAGAGAAGCTTACAAAAGA 58.816 33.333 18.69 5.96 40.29 2.52
3503 5947 5.819901 TGTCAACAAATGTGATGTGACTGTA 59.180 36.000 13.99 0.00 36.45 2.74
3576 6022 0.039527 AAATGACGCAAAACTCGCCC 60.040 50.000 0.00 0.00 0.00 6.13
3809 6256 1.067354 GCACAGGGGAAATCAGCAAAG 60.067 52.381 0.00 0.00 0.00 2.77
3878 6326 3.007614 GCCACTGTGGTTTTCTAGTCCTA 59.992 47.826 26.48 0.00 40.46 2.94
3934 6386 8.723942 AGTATGATACAAGAGATTTGGTTCAC 57.276 34.615 5.28 0.00 0.00 3.18
4010 6462 7.706179 TGAAAATTTCAAGAATTCAAGCGTTCT 59.294 29.630 5.87 0.00 36.59 3.01
4013 6465 7.569957 GCATGAAAATTTCAAGAATTCAAGCGT 60.570 33.333 12.75 0.00 43.95 5.07
4064 6516 9.688592 GTGATGAAGAAAATTCAAGACTTCAAT 57.311 29.630 0.00 0.00 45.89 2.57
4249 6836 4.069232 TCTCTTGCGAGTGCCGGG 62.069 66.667 2.18 0.00 41.78 5.73
4281 6868 2.572191 TTACGAGTGCCGGATTAGTG 57.428 50.000 5.05 0.00 43.93 2.74
4283 6870 3.713288 TCATTTACGAGTGCCGGATTAG 58.287 45.455 5.05 0.00 43.93 1.73
4289 6876 2.809446 TCTCATCATTTACGAGTGCCG 58.191 47.619 0.00 0.00 45.44 5.69
4337 6924 3.074390 TCCACATCCCAGAGATTTGTGTT 59.926 43.478 0.00 0.00 31.76 3.32
4340 6927 2.025887 GGTCCACATCCCAGAGATTTGT 60.026 50.000 0.00 0.00 31.76 2.83
4407 6994 0.961753 CAAAGTCAGGTTCCAAGCCC 59.038 55.000 0.00 0.00 0.00 5.19
4408 6995 1.692411 ACAAAGTCAGGTTCCAAGCC 58.308 50.000 0.00 0.00 0.00 4.35
4409 6996 2.799562 GCAACAAAGTCAGGTTCCAAGC 60.800 50.000 0.00 0.00 0.00 4.01
4410 6997 2.689983 AGCAACAAAGTCAGGTTCCAAG 59.310 45.455 0.00 0.00 0.00 3.61
4411 6998 2.733956 AGCAACAAAGTCAGGTTCCAA 58.266 42.857 0.00 0.00 0.00 3.53
4412 6999 2.426738 CAAGCAACAAAGTCAGGTTCCA 59.573 45.455 0.00 0.00 0.00 3.53
4413 7000 2.223805 CCAAGCAACAAAGTCAGGTTCC 60.224 50.000 0.00 0.00 0.00 3.62
4414 7001 2.687935 TCCAAGCAACAAAGTCAGGTTC 59.312 45.455 0.00 0.00 0.00 3.62
4415 7002 2.733956 TCCAAGCAACAAAGTCAGGTT 58.266 42.857 0.00 0.00 0.00 3.50
4416 7003 2.427095 GTTCCAAGCAACAAAGTCAGGT 59.573 45.455 0.00 0.00 0.00 4.00
4417 7004 2.223805 GGTTCCAAGCAACAAAGTCAGG 60.224 50.000 0.00 0.00 0.00 3.86
4418 7005 2.689983 AGGTTCCAAGCAACAAAGTCAG 59.310 45.455 0.00 0.00 0.00 3.51
4419 7006 2.426738 CAGGTTCCAAGCAACAAAGTCA 59.573 45.455 0.00 0.00 0.00 3.41
4445 7048 3.067106 CGCACAGAGAAAGTGGTTGTAT 58.933 45.455 0.00 0.00 37.46 2.29
4465 7068 5.388111 CCATTCAACATAATATGCTGAGCG 58.612 41.667 6.47 3.05 36.79 5.03
4481 7084 5.162892 TGGCCATAATATCCTTCCCATTCAA 60.163 40.000 0.00 0.00 0.00 2.69
4495 7098 8.062536 ACCTATGTTTAACCTTTGGCCATAATA 58.937 33.333 6.09 0.00 0.00 0.98
4497 7100 6.257586 ACCTATGTTTAACCTTTGGCCATAA 58.742 36.000 6.09 0.00 0.00 1.90
4523 7126 2.120909 ACCGCCTGCATGGTATTGC 61.121 57.895 3.77 0.00 43.07 3.56
4524 7127 1.727511 CCACCGCCTGCATGGTATTG 61.728 60.000 5.23 0.50 36.50 1.90
4525 7128 1.453745 CCACCGCCTGCATGGTATT 60.454 57.895 5.23 0.00 36.50 1.89
4526 7129 2.192979 CCACCGCCTGCATGGTAT 59.807 61.111 5.23 0.00 36.50 2.73
4527 7130 2.901281 AACCACCGCCTGCATGGTA 61.901 57.895 9.29 0.00 46.18 3.25
4529 7132 3.751246 CAACCACCGCCTGCATGG 61.751 66.667 1.63 1.63 39.57 3.66
4530 7133 4.424566 GCAACCACCGCCTGCATG 62.425 66.667 0.00 0.00 36.09 4.06
4543 7146 4.192317 CAAGTGAGTTCCTATAGGGCAAC 58.808 47.826 18.97 15.69 35.41 4.17
4544 7147 3.370527 GCAAGTGAGTTCCTATAGGGCAA 60.371 47.826 18.97 3.84 35.41 4.52
4545 7148 2.170607 GCAAGTGAGTTCCTATAGGGCA 59.829 50.000 18.97 9.28 35.41 5.36
4546 7149 2.803492 CGCAAGTGAGTTCCTATAGGGC 60.803 54.545 18.97 11.85 35.41 5.19
4547 7150 3.099267 CGCAAGTGAGTTCCTATAGGG 57.901 52.381 18.97 0.37 35.41 3.53
4562 7165 4.520846 GGAATCGCCGCACGCAAG 62.521 66.667 0.00 0.00 43.23 4.01
4565 7168 4.299316 GATGGAATCGCCGCACGC 62.299 66.667 0.00 0.00 43.23 5.34
4579 7182 1.601759 CCTTGCGGGCCCATAGATG 60.602 63.158 24.92 4.93 0.00 2.90
4580 7183 2.056906 GACCTTGCGGGCCCATAGAT 62.057 60.000 24.92 1.01 39.10 1.98
4581 7184 2.690881 ACCTTGCGGGCCCATAGA 60.691 61.111 24.92 2.96 39.10 1.98
4582 7185 2.203209 GACCTTGCGGGCCCATAG 60.203 66.667 24.92 15.02 39.10 2.23
4583 7186 4.169696 CGACCTTGCGGGCCCATA 62.170 66.667 24.92 6.75 39.10 2.74
4596 7199 1.676014 CCAAAGTGATGGAGGACGACC 60.676 57.143 0.00 0.00 43.54 4.79
4597 7200 1.726853 CCAAAGTGATGGAGGACGAC 58.273 55.000 0.00 0.00 43.54 4.34
4598 7201 0.036388 GCCAAAGTGATGGAGGACGA 60.036 55.000 0.00 0.00 43.54 4.20
4599 7202 1.026718 GGCCAAAGTGATGGAGGACG 61.027 60.000 0.00 0.00 43.54 4.79
4600 7203 0.681243 GGGCCAAAGTGATGGAGGAC 60.681 60.000 4.39 0.00 43.54 3.85
4601 7204 1.139498 TGGGCCAAAGTGATGGAGGA 61.139 55.000 2.13 0.00 43.54 3.71
4602 7205 0.251742 TTGGGCCAAAGTGATGGAGG 60.252 55.000 18.51 0.00 43.54 4.30
4603 7206 0.890683 GTTGGGCCAAAGTGATGGAG 59.109 55.000 22.82 0.00 43.54 3.86
4604 7207 0.893270 CGTTGGGCCAAAGTGATGGA 60.893 55.000 22.82 0.00 43.54 3.41
4605 7208 0.893270 TCGTTGGGCCAAAGTGATGG 60.893 55.000 27.49 9.58 43.70 3.51
4606 7209 0.523072 CTCGTTGGGCCAAAGTGATG 59.477 55.000 27.49 9.82 0.00 3.07
4607 7210 0.400213 TCTCGTTGGGCCAAAGTGAT 59.600 50.000 27.49 0.00 0.00 3.06
4608 7211 0.250295 CTCTCGTTGGGCCAAAGTGA 60.250 55.000 27.10 27.10 0.00 3.41
4609 7212 0.250295 TCTCTCGTTGGGCCAAAGTG 60.250 55.000 27.49 25.03 0.00 3.16
4610 7213 0.035458 CTCTCTCGTTGGGCCAAAGT 59.965 55.000 27.49 0.00 0.00 2.66
4611 7214 0.321671 TCTCTCTCGTTGGGCCAAAG 59.678 55.000 22.82 23.47 0.00 2.77
4612 7215 0.321671 CTCTCTCTCGTTGGGCCAAA 59.678 55.000 22.82 5.35 0.00 3.28
4613 7216 1.544825 CCTCTCTCTCGTTGGGCCAA 61.545 60.000 16.66 16.66 0.00 4.52
4614 7217 1.984570 CCTCTCTCTCGTTGGGCCA 60.985 63.158 0.00 0.00 0.00 5.36
4615 7218 2.896443 CCTCTCTCTCGTTGGGCC 59.104 66.667 0.00 0.00 0.00 5.80
4616 7219 2.185608 GCCTCTCTCTCGTTGGGC 59.814 66.667 0.00 0.00 0.00 5.36
4617 7220 1.216710 GTGCCTCTCTCTCGTTGGG 59.783 63.158 0.00 0.00 0.00 4.12
4618 7221 0.534412 ATGTGCCTCTCTCTCGTTGG 59.466 55.000 0.00 0.00 0.00 3.77
4619 7222 2.376808 AATGTGCCTCTCTCTCGTTG 57.623 50.000 0.00 0.00 0.00 4.10
4620 7223 2.300152 TCAAATGTGCCTCTCTCTCGTT 59.700 45.455 0.00 0.00 0.00 3.85
4621 7224 1.895798 TCAAATGTGCCTCTCTCTCGT 59.104 47.619 0.00 0.00 0.00 4.18
4622 7225 2.266554 GTCAAATGTGCCTCTCTCTCG 58.733 52.381 0.00 0.00 0.00 4.04
4623 7226 2.094494 TCGTCAAATGTGCCTCTCTCTC 60.094 50.000 0.00 0.00 0.00 3.20
4624 7227 1.895798 TCGTCAAATGTGCCTCTCTCT 59.104 47.619 0.00 0.00 0.00 3.10
4625 7228 2.370281 TCGTCAAATGTGCCTCTCTC 57.630 50.000 0.00 0.00 0.00 3.20
4626 7229 2.224281 TGTTCGTCAAATGTGCCTCTCT 60.224 45.455 0.00 0.00 0.00 3.10
4627 7230 2.143122 TGTTCGTCAAATGTGCCTCTC 58.857 47.619 0.00 0.00 0.00 3.20
4628 7231 2.254546 TGTTCGTCAAATGTGCCTCT 57.745 45.000 0.00 0.00 0.00 3.69
4629 7232 2.350772 CCTTGTTCGTCAAATGTGCCTC 60.351 50.000 0.00 0.00 35.48 4.70
4630 7233 1.608590 CCTTGTTCGTCAAATGTGCCT 59.391 47.619 0.00 0.00 35.48 4.75
4631 7234 1.606668 TCCTTGTTCGTCAAATGTGCC 59.393 47.619 0.00 0.00 35.48 5.01
4632 7235 2.350772 CCTCCTTGTTCGTCAAATGTGC 60.351 50.000 0.00 0.00 35.48 4.57
4633 7236 3.138304 TCCTCCTTGTTCGTCAAATGTG 58.862 45.455 0.00 0.00 35.48 3.21
4634 7237 3.485463 TCCTCCTTGTTCGTCAAATGT 57.515 42.857 0.00 0.00 35.48 2.71
4635 7238 6.494893 TTAATCCTCCTTGTTCGTCAAATG 57.505 37.500 0.00 0.00 35.48 2.32
4636 7239 7.611855 AGAATTAATCCTCCTTGTTCGTCAAAT 59.388 33.333 0.00 0.00 35.48 2.32
4637 7240 6.940298 AGAATTAATCCTCCTTGTTCGTCAAA 59.060 34.615 0.00 0.00 35.48 2.69
4638 7241 6.472887 AGAATTAATCCTCCTTGTTCGTCAA 58.527 36.000 0.00 0.00 34.61 3.18
4639 7242 6.049955 AGAATTAATCCTCCTTGTTCGTCA 57.950 37.500 0.00 0.00 0.00 4.35
4640 7243 6.986904 AAGAATTAATCCTCCTTGTTCGTC 57.013 37.500 0.00 0.00 0.00 4.20
4641 7244 7.309194 CCAAAAGAATTAATCCTCCTTGTTCGT 60.309 37.037 0.00 0.00 0.00 3.85
4642 7245 7.029563 CCAAAAGAATTAATCCTCCTTGTTCG 58.970 38.462 0.00 0.00 0.00 3.95
4643 7246 7.323420 CCCAAAAGAATTAATCCTCCTTGTTC 58.677 38.462 0.00 0.00 0.00 3.18
4644 7247 6.213397 CCCCAAAAGAATTAATCCTCCTTGTT 59.787 38.462 0.00 0.00 0.00 2.83
4645 7248 5.721480 CCCCAAAAGAATTAATCCTCCTTGT 59.279 40.000 0.00 0.00 0.00 3.16
4646 7249 5.395657 GCCCCAAAAGAATTAATCCTCCTTG 60.396 44.000 0.00 0.00 0.00 3.61
4647 7250 4.716784 GCCCCAAAAGAATTAATCCTCCTT 59.283 41.667 0.00 0.00 0.00 3.36
4648 7251 4.016199 AGCCCCAAAAGAATTAATCCTCCT 60.016 41.667 0.00 0.00 0.00 3.69
4649 7252 4.100035 CAGCCCCAAAAGAATTAATCCTCC 59.900 45.833 0.00 0.00 0.00 4.30
4650 7253 4.711846 ACAGCCCCAAAAGAATTAATCCTC 59.288 41.667 0.00 0.00 0.00 3.71
4651 7254 4.467438 CACAGCCCCAAAAGAATTAATCCT 59.533 41.667 0.00 0.00 0.00 3.24
4652 7255 4.222810 ACACAGCCCCAAAAGAATTAATCC 59.777 41.667 0.00 0.00 0.00 3.01
4653 7256 5.405935 ACACAGCCCCAAAAGAATTAATC 57.594 39.130 0.00 0.00 0.00 1.75
4654 7257 5.823861 AACACAGCCCCAAAAGAATTAAT 57.176 34.783 0.00 0.00 0.00 1.40
4655 7258 5.245075 CCTAACACAGCCCCAAAAGAATTAA 59.755 40.000 0.00 0.00 0.00 1.40
4656 7259 4.770010 CCTAACACAGCCCCAAAAGAATTA 59.230 41.667 0.00 0.00 0.00 1.40
4657 7260 3.578282 CCTAACACAGCCCCAAAAGAATT 59.422 43.478 0.00 0.00 0.00 2.17
4658 7261 3.165071 CCTAACACAGCCCCAAAAGAAT 58.835 45.455 0.00 0.00 0.00 2.40
4659 7262 2.593026 CCTAACACAGCCCCAAAAGAA 58.407 47.619 0.00 0.00 0.00 2.52
4660 7263 1.203001 CCCTAACACAGCCCCAAAAGA 60.203 52.381 0.00 0.00 0.00 2.52
4661 7264 1.256812 CCCTAACACAGCCCCAAAAG 58.743 55.000 0.00 0.00 0.00 2.27
4662 7265 0.558712 ACCCTAACACAGCCCCAAAA 59.441 50.000 0.00 0.00 0.00 2.44
4663 7266 1.074244 GTACCCTAACACAGCCCCAAA 59.926 52.381 0.00 0.00 0.00 3.28
4664 7267 0.694196 GTACCCTAACACAGCCCCAA 59.306 55.000 0.00 0.00 0.00 4.12
4665 7268 1.546589 CGTACCCTAACACAGCCCCA 61.547 60.000 0.00 0.00 0.00 4.96
4666 7269 1.219935 CGTACCCTAACACAGCCCC 59.780 63.158 0.00 0.00 0.00 5.80
4667 7270 0.175073 CTCGTACCCTAACACAGCCC 59.825 60.000 0.00 0.00 0.00 5.19
4668 7271 0.893447 ACTCGTACCCTAACACAGCC 59.107 55.000 0.00 0.00 0.00 4.85
4669 7272 5.702349 ATATACTCGTACCCTAACACAGC 57.298 43.478 0.00 0.00 0.00 4.40
4689 7292 9.831682 TCCCCACTTTGACACATACTATATATA 57.168 33.333 0.00 0.00 0.00 0.86
4690 7293 8.736097 TCCCCACTTTGACACATACTATATAT 57.264 34.615 0.00 0.00 0.00 0.86
4691 7294 8.736097 ATCCCCACTTTGACACATACTATATA 57.264 34.615 0.00 0.00 0.00 0.86
4692 7295 7.633018 ATCCCCACTTTGACACATACTATAT 57.367 36.000 0.00 0.00 0.00 0.86
4693 7296 7.234782 CCTATCCCCACTTTGACACATACTATA 59.765 40.741 0.00 0.00 0.00 1.31
4694 7297 5.975988 ATCCCCACTTTGACACATACTAT 57.024 39.130 0.00 0.00 0.00 2.12
4695 7298 5.365605 CCTATCCCCACTTTGACACATACTA 59.634 44.000 0.00 0.00 0.00 1.82
4696 7299 4.164221 CCTATCCCCACTTTGACACATACT 59.836 45.833 0.00 0.00 0.00 2.12
4697 7300 4.163458 TCCTATCCCCACTTTGACACATAC 59.837 45.833 0.00 0.00 0.00 2.39
4698 7301 4.163458 GTCCTATCCCCACTTTGACACATA 59.837 45.833 0.00 0.00 0.00 2.29
4699 7302 3.054361 GTCCTATCCCCACTTTGACACAT 60.054 47.826 0.00 0.00 0.00 3.21
4700 7303 2.304761 GTCCTATCCCCACTTTGACACA 59.695 50.000 0.00 0.00 0.00 3.72
4701 7304 2.355818 GGTCCTATCCCCACTTTGACAC 60.356 54.545 0.00 0.00 0.00 3.67
4702 7305 1.913419 GGTCCTATCCCCACTTTGACA 59.087 52.381 0.00 0.00 0.00 3.58
4703 7306 1.913419 TGGTCCTATCCCCACTTTGAC 59.087 52.381 0.00 0.00 0.00 3.18
4704 7307 2.307686 GTTGGTCCTATCCCCACTTTGA 59.692 50.000 0.00 0.00 0.00 2.69
4705 7308 2.041081 TGTTGGTCCTATCCCCACTTTG 59.959 50.000 0.00 0.00 0.00 2.77
4706 7309 2.354328 TGTTGGTCCTATCCCCACTTT 58.646 47.619 0.00 0.00 0.00 2.66
4707 7310 2.053747 TGTTGGTCCTATCCCCACTT 57.946 50.000 0.00 0.00 0.00 3.16
4708 7311 2.286935 ATGTTGGTCCTATCCCCACT 57.713 50.000 0.00 0.00 0.00 4.00
4709 7312 4.844655 AGTATATGTTGGTCCTATCCCCAC 59.155 45.833 0.00 0.00 0.00 4.61
4710 7313 5.101254 AGTATATGTTGGTCCTATCCCCA 57.899 43.478 0.00 0.00 0.00 4.96
4711 7314 5.661759 CCTAGTATATGTTGGTCCTATCCCC 59.338 48.000 0.00 0.00 0.00 4.81
4712 7315 6.154706 CACCTAGTATATGTTGGTCCTATCCC 59.845 46.154 0.00 0.00 0.00 3.85
4713 7316 6.724905 ACACCTAGTATATGTTGGTCCTATCC 59.275 42.308 0.00 0.00 0.00 2.59
4714 7317 7.450634 TGACACCTAGTATATGTTGGTCCTATC 59.549 40.741 0.00 0.00 0.00 2.08
4715 7318 7.232941 GTGACACCTAGTATATGTTGGTCCTAT 59.767 40.741 0.00 0.00 0.00 2.57
4716 7319 6.548622 GTGACACCTAGTATATGTTGGTCCTA 59.451 42.308 0.00 0.00 0.00 2.94
4717 7320 5.363005 GTGACACCTAGTATATGTTGGTCCT 59.637 44.000 0.00 0.00 0.00 3.85
4718 7321 5.128171 TGTGACACCTAGTATATGTTGGTCC 59.872 44.000 2.45 0.00 0.00 4.46
4719 7322 6.040878 GTGTGACACCTAGTATATGTTGGTC 58.959 44.000 3.92 0.00 0.00 4.02
4720 7323 5.482526 TGTGTGACACCTAGTATATGTTGGT 59.517 40.000 13.85 0.00 32.73 3.67
4721 7324 5.972935 TGTGTGACACCTAGTATATGTTGG 58.027 41.667 13.85 0.00 32.73 3.77
4722 7325 7.264947 TCATGTGTGACACCTAGTATATGTTG 58.735 38.462 13.85 0.00 32.73 3.33
4723 7326 7.418337 TCATGTGTGACACCTAGTATATGTT 57.582 36.000 13.85 0.00 32.73 2.71
4724 7327 7.265673 GTTCATGTGTGACACCTAGTATATGT 58.734 38.462 13.85 0.00 33.11 2.29
4725 7328 7.700322 GTTCATGTGTGACACCTAGTATATG 57.300 40.000 13.85 8.29 33.11 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.