Multiple sequence alignment - TraesCS5D01G370700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G370700 | chr5D | 100.000 | 2837 | 0 | 0 | 1 | 2837 | 445383733 | 445380897 | 0.000000e+00 | 5240.0 |
1 | TraesCS5D01G370700 | chr5B | 93.481 | 1534 | 81 | 8 | 539 | 2055 | 542987192 | 542985661 | 0.000000e+00 | 2261.0 |
2 | TraesCS5D01G370700 | chr5B | 88.866 | 485 | 23 | 11 | 72 | 552 | 542987754 | 542987297 | 4.100000e-158 | 568.0 |
3 | TraesCS5D01G370700 | chr5B | 85.326 | 184 | 16 | 6 | 2119 | 2301 | 542985492 | 542985319 | 2.250000e-41 | 180.0 |
4 | TraesCS5D01G370700 | chr5B | 76.498 | 217 | 34 | 9 | 2538 | 2743 | 542984883 | 542984673 | 5.000000e-18 | 102.0 |
5 | TraesCS5D01G370700 | chr5B | 88.889 | 72 | 4 | 3 | 1040 | 1107 | 681044038 | 681044109 | 5.040000e-13 | 86.1 |
6 | TraesCS5D01G370700 | chr3D | 81.623 | 1257 | 191 | 25 | 999 | 2241 | 597398064 | 597399294 | 0.000000e+00 | 1005.0 |
7 | TraesCS5D01G370700 | chr4B | 82.126 | 1091 | 173 | 13 | 999 | 2074 | 650601682 | 650600599 | 0.000000e+00 | 915.0 |
8 | TraesCS5D01G370700 | chr4A | 81.975 | 1104 | 176 | 9 | 999 | 2083 | 729114054 | 729115153 | 0.000000e+00 | 915.0 |
9 | TraesCS5D01G370700 | chr4A | 81.471 | 1101 | 173 | 19 | 1005 | 2083 | 728728981 | 728727890 | 0.000000e+00 | 874.0 |
10 | TraesCS5D01G370700 | chr5A | 90.818 | 697 | 40 | 12 | 72 | 754 | 563006419 | 563005733 | 0.000000e+00 | 911.0 |
11 | TraesCS5D01G370700 | chr5A | 82.016 | 1101 | 165 | 21 | 999 | 2074 | 688666231 | 688665139 | 0.000000e+00 | 905.0 |
12 | TraesCS5D01G370700 | chr5A | 91.883 | 579 | 41 | 3 | 769 | 1346 | 562999816 | 562999243 | 0.000000e+00 | 804.0 |
13 | TraesCS5D01G370700 | chr5A | 93.519 | 540 | 29 | 2 | 1351 | 1885 | 562999154 | 562998616 | 0.000000e+00 | 798.0 |
14 | TraesCS5D01G370700 | chr5A | 91.115 | 529 | 34 | 10 | 1883 | 2408 | 562996181 | 562995663 | 0.000000e+00 | 704.0 |
15 | TraesCS5D01G370700 | chr4D | 85.132 | 491 | 63 | 6 | 1584 | 2067 | 504068721 | 504068234 | 7.060000e-136 | 494.0 |
16 | TraesCS5D01G370700 | chr4D | 77.469 | 648 | 109 | 24 | 999 | 1617 | 503967877 | 503967238 | 1.250000e-93 | 353.0 |
17 | TraesCS5D01G370700 | chr2B | 75.174 | 431 | 89 | 12 | 1483 | 1900 | 692129039 | 692129464 | 1.340000e-43 | 187.0 |
18 | TraesCS5D01G370700 | chr2D | 72.250 | 591 | 141 | 15 | 1475 | 2047 | 575831697 | 575832282 | 8.130000e-36 | 161.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G370700 | chr5D | 445380897 | 445383733 | 2836 | True | 5240.000000 | 5240 | 100.000000 | 1 | 2837 | 1 | chr5D.!!$R1 | 2836 |
1 | TraesCS5D01G370700 | chr5B | 542984673 | 542987754 | 3081 | True | 777.750000 | 2261 | 86.042750 | 72 | 2743 | 4 | chr5B.!!$R1 | 2671 |
2 | TraesCS5D01G370700 | chr3D | 597398064 | 597399294 | 1230 | False | 1005.000000 | 1005 | 81.623000 | 999 | 2241 | 1 | chr3D.!!$F1 | 1242 |
3 | TraesCS5D01G370700 | chr4B | 650600599 | 650601682 | 1083 | True | 915.000000 | 915 | 82.126000 | 999 | 2074 | 1 | chr4B.!!$R1 | 1075 |
4 | TraesCS5D01G370700 | chr4A | 729114054 | 729115153 | 1099 | False | 915.000000 | 915 | 81.975000 | 999 | 2083 | 1 | chr4A.!!$F1 | 1084 |
5 | TraesCS5D01G370700 | chr4A | 728727890 | 728728981 | 1091 | True | 874.000000 | 874 | 81.471000 | 1005 | 2083 | 1 | chr4A.!!$R1 | 1078 |
6 | TraesCS5D01G370700 | chr5A | 563005733 | 563006419 | 686 | True | 911.000000 | 911 | 90.818000 | 72 | 754 | 1 | chr5A.!!$R1 | 682 |
7 | TraesCS5D01G370700 | chr5A | 688665139 | 688666231 | 1092 | True | 905.000000 | 905 | 82.016000 | 999 | 2074 | 1 | chr5A.!!$R2 | 1075 |
8 | TraesCS5D01G370700 | chr5A | 562995663 | 562999816 | 4153 | True | 768.666667 | 804 | 92.172333 | 769 | 2408 | 3 | chr5A.!!$R3 | 1639 |
9 | TraesCS5D01G370700 | chr4D | 503967238 | 503967877 | 639 | True | 353.000000 | 353 | 77.469000 | 999 | 1617 | 1 | chr4D.!!$R1 | 618 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
64 | 65 | 0.110238 | CCCATGACAAAACAGTCGCG | 60.110 | 55.0 | 0.0 | 0.0 | 41.41 | 5.87 | F |
1377 | 1627 | 0.035343 | GTACTTGGGGCTGGGAGAAC | 60.035 | 60.0 | 0.0 | 0.0 | 0.00 | 3.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1414 | 1664 | 0.867746 | GTGAAGCAGTCGTCATTGCA | 59.132 | 50.0 | 0.0 | 0.0 | 42.67 | 4.08 | R |
2519 | 5504 | 0.044855 | AGAGACCCCCAACCTAGCAT | 59.955 | 55.0 | 0.0 | 0.0 | 0.00 | 3.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 7.798596 | AAGAACTATACGAATACCTTCTCGA | 57.201 | 36.000 | 0.00 | 0.00 | 38.43 | 4.04 |
26 | 27 | 7.798596 | AGAACTATACGAATACCTTCTCGAA | 57.201 | 36.000 | 0.00 | 0.00 | 38.43 | 3.71 |
27 | 28 | 7.863666 | AGAACTATACGAATACCTTCTCGAAG | 58.136 | 38.462 | 0.00 | 0.00 | 38.43 | 3.79 |
28 | 29 | 7.714377 | AGAACTATACGAATACCTTCTCGAAGA | 59.286 | 37.037 | 8.19 | 0.00 | 40.79 | 2.87 |
29 | 30 | 7.798596 | ACTATACGAATACCTTCTCGAAGAA | 57.201 | 36.000 | 8.19 | 0.00 | 40.79 | 2.52 |
30 | 31 | 8.218338 | ACTATACGAATACCTTCTCGAAGAAA | 57.782 | 34.615 | 8.19 | 0.00 | 40.79 | 2.52 |
31 | 32 | 8.127954 | ACTATACGAATACCTTCTCGAAGAAAC | 58.872 | 37.037 | 8.19 | 0.00 | 40.79 | 2.78 |
32 | 33 | 5.388408 | ACGAATACCTTCTCGAAGAAACT | 57.612 | 39.130 | 8.19 | 0.00 | 40.79 | 2.66 |
33 | 34 | 5.162075 | ACGAATACCTTCTCGAAGAAACTG | 58.838 | 41.667 | 8.19 | 0.00 | 40.79 | 3.16 |
34 | 35 | 5.162075 | CGAATACCTTCTCGAAGAAACTGT | 58.838 | 41.667 | 8.19 | 0.48 | 40.79 | 3.55 |
35 | 36 | 6.072286 | ACGAATACCTTCTCGAAGAAACTGTA | 60.072 | 38.462 | 8.19 | 2.53 | 40.79 | 2.74 |
36 | 37 | 6.469595 | CGAATACCTTCTCGAAGAAACTGTAG | 59.530 | 42.308 | 8.19 | 0.00 | 40.79 | 2.74 |
37 | 38 | 4.522722 | ACCTTCTCGAAGAAACTGTAGG | 57.477 | 45.455 | 8.19 | 0.00 | 40.79 | 3.18 |
38 | 39 | 3.896272 | ACCTTCTCGAAGAAACTGTAGGT | 59.104 | 43.478 | 8.19 | 0.00 | 40.79 | 3.08 |
39 | 40 | 5.075493 | ACCTTCTCGAAGAAACTGTAGGTA | 58.925 | 41.667 | 8.19 | 0.00 | 40.79 | 3.08 |
40 | 41 | 5.715753 | ACCTTCTCGAAGAAACTGTAGGTAT | 59.284 | 40.000 | 8.19 | 0.00 | 40.79 | 2.73 |
41 | 42 | 6.210984 | ACCTTCTCGAAGAAACTGTAGGTATT | 59.789 | 38.462 | 8.19 | 0.00 | 40.79 | 1.89 |
42 | 43 | 6.752815 | CCTTCTCGAAGAAACTGTAGGTATTC | 59.247 | 42.308 | 8.19 | 0.00 | 40.79 | 1.75 |
43 | 44 | 6.829229 | TCTCGAAGAAACTGTAGGTATTCA | 57.171 | 37.500 | 0.00 | 0.00 | 34.09 | 2.57 |
44 | 45 | 6.853720 | TCTCGAAGAAACTGTAGGTATTCAG | 58.146 | 40.000 | 0.00 | 0.00 | 34.09 | 3.02 |
45 | 46 | 5.408356 | TCGAAGAAACTGTAGGTATTCAGC | 58.592 | 41.667 | 0.00 | 0.00 | 35.37 | 4.26 |
46 | 47 | 4.567159 | CGAAGAAACTGTAGGTATTCAGCC | 59.433 | 45.833 | 0.00 | 0.00 | 35.37 | 4.85 |
47 | 48 | 4.489306 | AGAAACTGTAGGTATTCAGCCC | 57.511 | 45.455 | 0.00 | 0.00 | 35.37 | 5.19 |
48 | 49 | 3.844211 | AGAAACTGTAGGTATTCAGCCCA | 59.156 | 43.478 | 0.00 | 0.00 | 35.37 | 5.36 |
49 | 50 | 4.475016 | AGAAACTGTAGGTATTCAGCCCAT | 59.525 | 41.667 | 0.00 | 0.00 | 35.37 | 4.00 |
50 | 51 | 3.845781 | ACTGTAGGTATTCAGCCCATG | 57.154 | 47.619 | 0.00 | 0.00 | 35.37 | 3.66 |
51 | 52 | 3.384168 | ACTGTAGGTATTCAGCCCATGA | 58.616 | 45.455 | 0.00 | 0.00 | 35.37 | 3.07 |
52 | 53 | 3.134804 | ACTGTAGGTATTCAGCCCATGAC | 59.865 | 47.826 | 0.00 | 0.00 | 37.77 | 3.06 |
53 | 54 | 3.111484 | TGTAGGTATTCAGCCCATGACA | 58.889 | 45.455 | 0.00 | 0.00 | 37.77 | 3.58 |
54 | 55 | 3.521531 | TGTAGGTATTCAGCCCATGACAA | 59.478 | 43.478 | 0.00 | 0.00 | 37.77 | 3.18 |
55 | 56 | 3.737559 | AGGTATTCAGCCCATGACAAA | 57.262 | 42.857 | 0.00 | 0.00 | 37.77 | 2.83 |
56 | 57 | 4.046286 | AGGTATTCAGCCCATGACAAAA | 57.954 | 40.909 | 0.00 | 0.00 | 37.77 | 2.44 |
57 | 58 | 3.763897 | AGGTATTCAGCCCATGACAAAAC | 59.236 | 43.478 | 0.00 | 0.00 | 37.77 | 2.43 |
58 | 59 | 3.509575 | GGTATTCAGCCCATGACAAAACA | 59.490 | 43.478 | 0.00 | 0.00 | 37.77 | 2.83 |
59 | 60 | 3.947910 | ATTCAGCCCATGACAAAACAG | 57.052 | 42.857 | 0.00 | 0.00 | 37.77 | 3.16 |
60 | 61 | 2.363306 | TCAGCCCATGACAAAACAGT | 57.637 | 45.000 | 0.00 | 0.00 | 31.12 | 3.55 |
61 | 62 | 2.229792 | TCAGCCCATGACAAAACAGTC | 58.770 | 47.619 | 0.00 | 0.00 | 38.99 | 3.51 |
62 | 63 | 1.069022 | CAGCCCATGACAAAACAGTCG | 60.069 | 52.381 | 0.00 | 0.00 | 41.41 | 4.18 |
63 | 64 | 0.387239 | GCCCATGACAAAACAGTCGC | 60.387 | 55.000 | 0.00 | 0.00 | 41.41 | 5.19 |
64 | 65 | 0.110238 | CCCATGACAAAACAGTCGCG | 60.110 | 55.000 | 0.00 | 0.00 | 41.41 | 5.87 |
65 | 66 | 0.586319 | CCATGACAAAACAGTCGCGT | 59.414 | 50.000 | 5.77 | 0.00 | 41.41 | 6.01 |
66 | 67 | 1.660052 | CCATGACAAAACAGTCGCGTG | 60.660 | 52.381 | 5.77 | 0.00 | 41.41 | 5.34 |
67 | 68 | 0.586319 | ATGACAAAACAGTCGCGTGG | 59.414 | 50.000 | 5.77 | 0.00 | 41.41 | 4.94 |
68 | 69 | 1.278637 | GACAAAACAGTCGCGTGGG | 59.721 | 57.895 | 5.77 | 0.00 | 0.00 | 4.61 |
69 | 70 | 1.153329 | ACAAAACAGTCGCGTGGGA | 60.153 | 52.632 | 5.77 | 0.00 | 0.00 | 4.37 |
70 | 71 | 1.157870 | ACAAAACAGTCGCGTGGGAG | 61.158 | 55.000 | 5.77 | 0.00 | 0.00 | 4.30 |
184 | 185 | 1.519455 | GAATCACCTCGTCGGCCAG | 60.519 | 63.158 | 2.24 | 0.00 | 35.61 | 4.85 |
232 | 233 | 3.213402 | CTCTCCTCCGTCCGCTCC | 61.213 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
263 | 266 | 2.203832 | TCTGCTCTCACCTGCCCA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
413 | 425 | 1.001378 | CTGGTTTTCCTTGGCTTCGTG | 60.001 | 52.381 | 0.00 | 0.00 | 41.38 | 4.35 |
414 | 426 | 0.313987 | GGTTTTCCTTGGCTTCGTGG | 59.686 | 55.000 | 0.00 | 0.00 | 36.94 | 4.94 |
415 | 427 | 1.029681 | GTTTTCCTTGGCTTCGTGGT | 58.970 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
416 | 428 | 2.223745 | GTTTTCCTTGGCTTCGTGGTA | 58.776 | 47.619 | 0.00 | 0.00 | 0.00 | 3.25 |
417 | 429 | 1.886886 | TTTCCTTGGCTTCGTGGTAC | 58.113 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
418 | 430 | 1.053424 | TTCCTTGGCTTCGTGGTACT | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
479 | 491 | 8.737168 | AGCAGTACTATGATATGCAAGAAAAA | 57.263 | 30.769 | 0.00 | 0.00 | 39.34 | 1.94 |
517 | 534 | 1.346479 | TTTTCCTGGTCCGGTGGTGA | 61.346 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
573 | 708 | 0.881796 | CGGTTCCCCTTTTCTTCTGC | 59.118 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
574 | 709 | 1.545651 | CGGTTCCCCTTTTCTTCTGCT | 60.546 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
580 | 715 | 3.515901 | TCCCCTTTTCTTCTGCTAGTCTC | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
678 | 819 | 4.201910 | CCAAGTGTTTCGCTTACCCATATG | 60.202 | 45.833 | 0.00 | 0.00 | 32.60 | 1.78 |
714 | 855 | 4.264253 | ACTTCCTTCGCATGAATCATTCA | 58.736 | 39.130 | 1.59 | 1.59 | 45.01 | 2.57 |
720 | 861 | 4.556942 | TCGCATGAATCATTCAATGACC | 57.443 | 40.909 | 3.63 | 0.00 | 43.95 | 4.02 |
730 | 871 | 9.300681 | TGAATCATTCAATGACCTACTTTCTTT | 57.699 | 29.630 | 0.98 | 0.00 | 43.01 | 2.52 |
739 | 880 | 9.667107 | CAATGACCTACTTTCTTTGATTAGGTA | 57.333 | 33.333 | 0.00 | 0.00 | 42.15 | 3.08 |
784 | 926 | 2.125106 | CACTCCCAGGTTAGCGCC | 60.125 | 66.667 | 2.29 | 0.00 | 0.00 | 6.53 |
785 | 927 | 2.606519 | ACTCCCAGGTTAGCGCCA | 60.607 | 61.111 | 2.29 | 0.00 | 0.00 | 5.69 |
852 | 994 | 6.999950 | TGCTAAAAGTATTGGTCAGTACTCA | 58.000 | 36.000 | 6.61 | 0.00 | 33.49 | 3.41 |
897 | 1043 | 2.685388 | TGGATGCTTGTTGAACGTGAAA | 59.315 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
959 | 1105 | 7.923878 | ACACATTGAGTATATATGCACGTACAA | 59.076 | 33.333 | 3.52 | 2.81 | 0.00 | 2.41 |
974 | 1120 | 4.327357 | CACGTACAAGAGCATTCAGGTTAG | 59.673 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
996 | 1142 | 1.199097 | GCAACACCCATAACTTCCGTG | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
997 | 1143 | 2.500229 | CAACACCCATAACTTCCGTGT | 58.500 | 47.619 | 0.00 | 0.00 | 39.27 | 4.49 |
1161 | 1307 | 7.889469 | AGTTCATTAGCTCAAACACATTCAAT | 58.111 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
1214 | 1360 | 2.130193 | TCCTGATGGATTGAAGGAGGG | 58.870 | 52.381 | 0.00 | 0.00 | 37.46 | 4.30 |
1220 | 1369 | 3.199442 | TGGATTGAAGGAGGGTACAGA | 57.801 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1377 | 1627 | 0.035343 | GTACTTGGGGCTGGGAGAAC | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1385 | 1635 | 1.751351 | GGGCTGGGAGAACTTTATTGC | 59.249 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
1390 | 1640 | 3.745799 | TGGGAGAACTTTATTGCGAACA | 58.254 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
1391 | 1641 | 4.138290 | TGGGAGAACTTTATTGCGAACAA | 58.862 | 39.130 | 0.00 | 0.00 | 40.87 | 2.83 |
1395 | 1645 | 5.974751 | GGAGAACTTTATTGCGAACAACAAA | 59.025 | 36.000 | 0.00 | 0.00 | 38.99 | 2.83 |
1413 | 1663 | 6.998673 | ACAACAAACTTAAGGAACTGCTATCT | 59.001 | 34.615 | 7.53 | 0.00 | 40.86 | 1.98 |
1414 | 1664 | 7.502561 | ACAACAAACTTAAGGAACTGCTATCTT | 59.497 | 33.333 | 7.53 | 0.00 | 40.86 | 2.40 |
1651 | 1905 | 1.302832 | AAGGCCGAGCTCTTTGGTG | 60.303 | 57.895 | 12.85 | 0.00 | 32.26 | 4.17 |
1806 | 2060 | 1.008538 | CTTGTTGGTTGCCGCAGAC | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
1850 | 2109 | 4.701956 | ATTTGTGAAGGGAAACTATGCG | 57.298 | 40.909 | 0.00 | 0.00 | 0.00 | 4.73 |
1954 | 4650 | 4.168101 | TCAGATACCTTTCTTCACAGGGT | 58.832 | 43.478 | 0.00 | 0.00 | 34.02 | 4.34 |
1999 | 4695 | 2.743664 | TGATGAATTCAAGCACCTCACG | 59.256 | 45.455 | 13.09 | 0.00 | 0.00 | 4.35 |
2099 | 4930 | 6.273825 | AGTATTTAGCAGTATCCGACTTGTG | 58.726 | 40.000 | 0.00 | 0.00 | 35.64 | 3.33 |
2101 | 4932 | 0.608130 | AGCAGTATCCGACTTGTGCA | 59.392 | 50.000 | 0.00 | 0.00 | 35.64 | 4.57 |
2133 | 4964 | 5.802956 | GCTGTCAAGTGTGAAGATCTAGTAC | 59.197 | 44.000 | 0.00 | 0.00 | 34.87 | 2.73 |
2136 | 4967 | 8.270080 | TGTCAAGTGTGAAGATCTAGTACTAG | 57.730 | 38.462 | 21.87 | 21.87 | 34.87 | 2.57 |
2139 | 4970 | 9.381033 | TCAAGTGTGAAGATCTAGTACTAGTAC | 57.619 | 37.037 | 25.58 | 23.03 | 34.84 | 2.73 |
2141 | 4972 | 9.603921 | AAGTGTGAAGATCTAGTACTAGTACTC | 57.396 | 37.037 | 33.47 | 21.36 | 44.58 | 2.59 |
2190 | 5039 | 6.929606 | GTGTATCCACTGTAAGACTGAACTTT | 59.070 | 38.462 | 0.00 | 0.00 | 38.61 | 2.66 |
2246 | 5095 | 8.947115 | ACTTATTGGCACTGAAAATTCTACTAC | 58.053 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
2249 | 5098 | 8.723942 | ATTGGCACTGAAAATTCTACTACTAG | 57.276 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2300 | 5150 | 5.358160 | GGCTTATTGGCACTGAAAATCTACT | 59.642 | 40.000 | 0.00 | 0.00 | 41.37 | 2.57 |
2388 | 5327 | 3.206150 | CAGTTACAAGGTGCACAGAACT | 58.794 | 45.455 | 20.43 | 15.53 | 0.00 | 3.01 |
2405 | 5361 | 4.331168 | CAGAACTACAAGAGGCTAATGTGC | 59.669 | 45.833 | 13.29 | 2.87 | 0.00 | 4.57 |
2413 | 5369 | 4.399004 | AGAGGCTAATGTGCTACTTCTG | 57.601 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2414 | 5370 | 3.772025 | AGAGGCTAATGTGCTACTTCTGT | 59.228 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2421 | 5377 | 7.040340 | GGCTAATGTGCTACTTCTGTATAGAGA | 60.040 | 40.741 | 0.00 | 0.00 | 33.70 | 3.10 |
2422 | 5378 | 8.020819 | GCTAATGTGCTACTTCTGTATAGAGAG | 58.979 | 40.741 | 0.00 | 0.00 | 33.70 | 3.20 |
2423 | 5379 | 6.892658 | ATGTGCTACTTCTGTATAGAGAGG | 57.107 | 41.667 | 7.39 | 7.39 | 33.70 | 3.69 |
2424 | 5380 | 5.133941 | TGTGCTACTTCTGTATAGAGAGGG | 58.866 | 45.833 | 12.78 | 7.06 | 33.70 | 4.30 |
2425 | 5381 | 4.022676 | GTGCTACTTCTGTATAGAGAGGGC | 60.023 | 50.000 | 12.78 | 8.19 | 33.70 | 5.19 |
2426 | 5382 | 3.508402 | GCTACTTCTGTATAGAGAGGGCC | 59.492 | 52.174 | 12.78 | 0.00 | 33.70 | 5.80 |
2454 | 5410 | 3.252701 | CCAGATGCTGATGTTATTGAGCC | 59.747 | 47.826 | 0.00 | 0.00 | 32.44 | 4.70 |
2455 | 5411 | 3.059120 | CAGATGCTGATGTTATTGAGCCG | 60.059 | 47.826 | 0.00 | 0.00 | 32.44 | 5.52 |
2457 | 5413 | 1.209261 | TGCTGATGTTATTGAGCCGGA | 59.791 | 47.619 | 5.05 | 0.00 | 0.00 | 5.14 |
2458 | 5414 | 1.869767 | GCTGATGTTATTGAGCCGGAG | 59.130 | 52.381 | 5.05 | 0.00 | 0.00 | 4.63 |
2459 | 5415 | 2.743183 | GCTGATGTTATTGAGCCGGAGT | 60.743 | 50.000 | 5.05 | 0.00 | 0.00 | 3.85 |
2461 | 5417 | 2.128035 | GATGTTATTGAGCCGGAGTCG | 58.872 | 52.381 | 5.05 | 0.00 | 0.00 | 4.18 |
2462 | 5418 | 0.459585 | TGTTATTGAGCCGGAGTCGC | 60.460 | 55.000 | 5.05 | 0.00 | 34.56 | 5.19 |
2464 | 5420 | 0.535335 | TTATTGAGCCGGAGTCGCTT | 59.465 | 50.000 | 5.05 | 0.00 | 34.56 | 4.68 |
2465 | 5421 | 0.179111 | TATTGAGCCGGAGTCGCTTG | 60.179 | 55.000 | 5.05 | 0.00 | 34.56 | 4.01 |
2466 | 5422 | 1.888436 | ATTGAGCCGGAGTCGCTTGA | 61.888 | 55.000 | 5.05 | 0.00 | 34.56 | 3.02 |
2467 | 5423 | 2.094757 | TTGAGCCGGAGTCGCTTGAA | 62.095 | 55.000 | 5.05 | 0.00 | 34.56 | 2.69 |
2468 | 5424 | 2.048127 | AGCCGGAGTCGCTTGAAC | 60.048 | 61.111 | 5.05 | 0.00 | 34.56 | 3.18 |
2481 | 5466 | 2.614057 | CGCTTGAACATCTGATTACCCC | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
2483 | 5468 | 3.873910 | CTTGAACATCTGATTACCCCGT | 58.126 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
2487 | 5472 | 3.543680 | ACATCTGATTACCCCGTTGAG | 57.456 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2490 | 5475 | 3.104519 | TCTGATTACCCCGTTGAGGTA | 57.895 | 47.619 | 0.00 | 0.00 | 38.89 | 3.08 |
2493 | 5478 | 2.436542 | TGATTACCCCGTTGAGGTATGG | 59.563 | 50.000 | 0.00 | 0.00 | 39.58 | 2.74 |
2494 | 5479 | 2.250921 | TTACCCCGTTGAGGTATGGA | 57.749 | 50.000 | 0.00 | 0.00 | 39.58 | 3.41 |
2497 | 5482 | 0.535102 | CCCCGTTGAGGTATGGATGC | 60.535 | 60.000 | 0.00 | 0.00 | 38.74 | 3.91 |
2500 | 5485 | 1.202806 | CCGTTGAGGTATGGATGCCAT | 60.203 | 52.381 | 4.18 | 4.18 | 46.99 | 4.40 |
2501 | 5486 | 2.575532 | CGTTGAGGTATGGATGCCATT | 58.424 | 47.619 | 4.03 | 0.00 | 42.23 | 3.16 |
2502 | 5487 | 2.951642 | CGTTGAGGTATGGATGCCATTT | 59.048 | 45.455 | 4.03 | 0.00 | 42.23 | 2.32 |
2503 | 5488 | 3.003689 | CGTTGAGGTATGGATGCCATTTC | 59.996 | 47.826 | 4.03 | 2.14 | 42.23 | 2.17 |
2504 | 5489 | 4.210331 | GTTGAGGTATGGATGCCATTTCT | 58.790 | 43.478 | 4.03 | 3.04 | 42.23 | 2.52 |
2505 | 5490 | 4.090761 | TGAGGTATGGATGCCATTTCTC | 57.909 | 45.455 | 4.03 | 11.54 | 42.23 | 2.87 |
2506 | 5491 | 3.181440 | TGAGGTATGGATGCCATTTCTCC | 60.181 | 47.826 | 17.81 | 11.04 | 42.23 | 3.71 |
2507 | 5492 | 2.108952 | AGGTATGGATGCCATTTCTCCC | 59.891 | 50.000 | 4.03 | 0.00 | 42.23 | 4.30 |
2508 | 5493 | 2.154462 | GTATGGATGCCATTTCTCCCG | 58.846 | 52.381 | 4.03 | 0.00 | 42.23 | 5.14 |
2509 | 5494 | 0.552848 | ATGGATGCCATTTCTCCCGT | 59.447 | 50.000 | 0.00 | 0.00 | 42.23 | 5.28 |
2510 | 5495 | 0.394216 | TGGATGCCATTTCTCCCGTG | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2511 | 5496 | 0.394352 | GGATGCCATTTCTCCCGTGT | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2512 | 5497 | 1.463674 | GATGCCATTTCTCCCGTGTT | 58.536 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2514 | 5499 | 0.958091 | TGCCATTTCTCCCGTGTTTG | 59.042 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2515 | 5500 | 1.243902 | GCCATTTCTCCCGTGTTTGA | 58.756 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2516 | 5501 | 1.068541 | GCCATTTCTCCCGTGTTTGAC | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2518 | 5503 | 2.226437 | CCATTTCTCCCGTGTTTGACAG | 59.774 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2519 | 5504 | 2.992124 | TTTCTCCCGTGTTTGACAGA | 57.008 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2520 | 5505 | 3.485463 | TTTCTCCCGTGTTTGACAGAT | 57.515 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
2523 | 5508 | 0.396435 | TCCCGTGTTTGACAGATGCT | 59.604 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2524 | 5509 | 1.621317 | TCCCGTGTTTGACAGATGCTA | 59.379 | 47.619 | 0.00 | 0.00 | 0.00 | 3.49 |
2525 | 5510 | 2.002586 | CCCGTGTTTGACAGATGCTAG | 58.997 | 52.381 | 0.00 | 0.00 | 0.00 | 3.42 |
2526 | 5511 | 2.002586 | CCGTGTTTGACAGATGCTAGG | 58.997 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
2527 | 5512 | 2.612972 | CCGTGTTTGACAGATGCTAGGT | 60.613 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2530 | 5515 | 3.189287 | GTGTTTGACAGATGCTAGGTTGG | 59.811 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
2531 | 5516 | 2.749621 | GTTTGACAGATGCTAGGTTGGG | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2532 | 5517 | 0.911769 | TGACAGATGCTAGGTTGGGG | 59.088 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2535 | 5520 | 0.181350 | CAGATGCTAGGTTGGGGGTC | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2565 | 5621 | 4.492791 | TGTGTTTGACAGATGATGCTTG | 57.507 | 40.909 | 0.00 | 0.00 | 0.00 | 4.01 |
2566 | 5622 | 3.884693 | TGTGTTTGACAGATGATGCTTGT | 59.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2567 | 5623 | 4.224433 | GTGTTTGACAGATGATGCTTGTG | 58.776 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
2568 | 5624 | 3.884693 | TGTTTGACAGATGATGCTTGTGT | 59.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
2578 | 5634 | 2.300433 | GATGCTTGTGTATGGATGCCA | 58.700 | 47.619 | 0.00 | 0.00 | 38.19 | 4.92 |
2582 | 5638 | 3.130869 | TGCTTGTGTATGGATGCCATTTC | 59.869 | 43.478 | 4.03 | 0.18 | 42.23 | 2.17 |
2584 | 5640 | 4.735578 | GCTTGTGTATGGATGCCATTTCTG | 60.736 | 45.833 | 4.03 | 0.00 | 42.23 | 3.02 |
2592 | 5648 | 0.527565 | ATGCCATTTCTGCCGTGTTC | 59.472 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2593 | 5649 | 0.537143 | TGCCATTTCTGCCGTGTTCT | 60.537 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2605 | 5661 | 0.234884 | CGTGTTCTCGGCTTTCAACC | 59.765 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2606 | 5662 | 1.594331 | GTGTTCTCGGCTTTCAACCT | 58.406 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
2623 | 5679 | 5.701029 | CAACCTTAGTTGTTGTTTGCTTG | 57.299 | 39.130 | 0.00 | 0.00 | 46.88 | 4.01 |
2624 | 5680 | 4.385358 | ACCTTAGTTGTTGTTTGCTTGG | 57.615 | 40.909 | 0.00 | 0.00 | 0.00 | 3.61 |
2625 | 5681 | 3.767131 | ACCTTAGTTGTTGTTTGCTTGGT | 59.233 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
2626 | 5682 | 4.221924 | ACCTTAGTTGTTGTTTGCTTGGTT | 59.778 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2627 | 5683 | 5.419471 | ACCTTAGTTGTTGTTTGCTTGGTTA | 59.581 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2635 | 5691 | 8.699749 | GTTGTTGTTTGCTTGGTTATTATCTTC | 58.300 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
2643 | 5699 | 6.706270 | TGCTTGGTTATTATCTTCGGAAGATC | 59.294 | 38.462 | 30.77 | 18.49 | 44.79 | 2.75 |
2645 | 5701 | 7.095439 | GCTTGGTTATTATCTTCGGAAGATCTG | 60.095 | 40.741 | 30.77 | 15.61 | 44.79 | 2.90 |
2646 | 5702 | 7.361457 | TGGTTATTATCTTCGGAAGATCTGT | 57.639 | 36.000 | 30.77 | 20.94 | 44.79 | 3.41 |
2647 | 5703 | 7.434492 | TGGTTATTATCTTCGGAAGATCTGTC | 58.566 | 38.462 | 30.77 | 19.30 | 44.79 | 3.51 |
2648 | 5704 | 7.069455 | TGGTTATTATCTTCGGAAGATCTGTCA | 59.931 | 37.037 | 30.77 | 20.26 | 44.79 | 3.58 |
2654 | 5710 | 4.931601 | TCTTCGGAAGATCTGTCATGTTTG | 59.068 | 41.667 | 16.19 | 0.00 | 41.60 | 2.93 |
2655 | 5711 | 4.271696 | TCGGAAGATCTGTCATGTTTGT | 57.728 | 40.909 | 0.00 | 0.00 | 33.31 | 2.83 |
2656 | 5712 | 5.400066 | TCGGAAGATCTGTCATGTTTGTA | 57.600 | 39.130 | 0.00 | 0.00 | 33.31 | 2.41 |
2657 | 5713 | 5.168569 | TCGGAAGATCTGTCATGTTTGTAC | 58.831 | 41.667 | 0.00 | 0.00 | 33.31 | 2.90 |
2659 | 5715 | 5.289675 | CGGAAGATCTGTCATGTTTGTACTC | 59.710 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2660 | 5716 | 5.289675 | GGAAGATCTGTCATGTTTGTACTCG | 59.710 | 44.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2669 | 5730 | 4.636648 | TCATGTTTGTACTCGTGGTGTTTT | 59.363 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2670 | 5731 | 5.124138 | TCATGTTTGTACTCGTGGTGTTTTT | 59.876 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2674 | 5735 | 1.528161 | GTACTCGTGGTGTTTTTCGGG | 59.472 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
2678 | 5739 | 1.066752 | GTGGTGTTTTTCGGGGTGC | 59.933 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
2684 | 5745 | 0.596577 | GTTTTTCGGGGTGCTTCTCC | 59.403 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2691 | 5752 | 0.606673 | GGGGTGCTTCTCCAGTGTTC | 60.607 | 60.000 | 0.00 | 0.00 | 36.51 | 3.18 |
2692 | 5753 | 0.606673 | GGGTGCTTCTCCAGTGTTCC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2695 | 5756 | 0.250467 | TGCTTCTCCAGTGTTCCTGC | 60.250 | 55.000 | 0.00 | 0.00 | 40.06 | 4.85 |
2700 | 5761 | 1.345741 | TCTCCAGTGTTCCTGCTCTTG | 59.654 | 52.381 | 0.00 | 0.00 | 40.06 | 3.02 |
2712 | 5776 | 3.091545 | CCTGCTCTTGGCCTGAATAAAA | 58.908 | 45.455 | 3.32 | 0.00 | 40.92 | 1.52 |
2713 | 5777 | 3.511146 | CCTGCTCTTGGCCTGAATAAAAA | 59.489 | 43.478 | 3.32 | 0.00 | 40.92 | 1.94 |
2743 | 5807 | 8.492748 | CGTGTAATGTGTGTATGTTTCTTACTT | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2744 | 5808 | 9.594038 | GTGTAATGTGTGTATGTTTCTTACTTG | 57.406 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2745 | 5809 | 8.286800 | TGTAATGTGTGTATGTTTCTTACTTGC | 58.713 | 33.333 | 0.00 | 0.00 | 0.00 | 4.01 |
2746 | 5810 | 6.875948 | ATGTGTGTATGTTTCTTACTTGCA | 57.124 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
2747 | 5811 | 6.299023 | TGTGTGTATGTTTCTTACTTGCAG | 57.701 | 37.500 | 0.00 | 0.00 | 29.46 | 4.41 |
2748 | 5812 | 5.820423 | TGTGTGTATGTTTCTTACTTGCAGT | 59.180 | 36.000 | 0.00 | 0.00 | 29.46 | 4.40 |
2749 | 5813 | 6.317642 | TGTGTGTATGTTTCTTACTTGCAGTT | 59.682 | 34.615 | 0.00 | 0.00 | 29.46 | 3.16 |
2750 | 5814 | 6.632834 | GTGTGTATGTTTCTTACTTGCAGTTG | 59.367 | 38.462 | 0.00 | 0.00 | 29.46 | 3.16 |
2751 | 5815 | 6.540551 | TGTGTATGTTTCTTACTTGCAGTTGA | 59.459 | 34.615 | 0.00 | 0.00 | 29.46 | 3.18 |
2752 | 5816 | 7.228507 | TGTGTATGTTTCTTACTTGCAGTTGAT | 59.771 | 33.333 | 0.00 | 0.00 | 29.46 | 2.57 |
2753 | 5817 | 8.717821 | GTGTATGTTTCTTACTTGCAGTTGATA | 58.282 | 33.333 | 0.00 | 0.00 | 29.46 | 2.15 |
2754 | 5818 | 8.717821 | TGTATGTTTCTTACTTGCAGTTGATAC | 58.282 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2755 | 5819 | 6.554334 | TGTTTCTTACTTGCAGTTGATACC | 57.446 | 37.500 | 0.00 | 0.00 | 0.00 | 2.73 |
2756 | 5820 | 5.472137 | TGTTTCTTACTTGCAGTTGATACCC | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2757 | 5821 | 4.901197 | TCTTACTTGCAGTTGATACCCA | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 4.51 |
2758 | 5822 | 5.235850 | TCTTACTTGCAGTTGATACCCAA | 57.764 | 39.130 | 0.00 | 0.00 | 0.00 | 4.12 |
2759 | 5823 | 5.626142 | TCTTACTTGCAGTTGATACCCAAA | 58.374 | 37.500 | 0.00 | 0.00 | 36.36 | 3.28 |
2760 | 5824 | 6.065374 | TCTTACTTGCAGTTGATACCCAAAA | 58.935 | 36.000 | 0.00 | 0.00 | 36.36 | 2.44 |
2761 | 5825 | 6.547880 | TCTTACTTGCAGTTGATACCCAAAAA | 59.452 | 34.615 | 0.00 | 0.00 | 36.36 | 1.94 |
2762 | 5826 | 5.200368 | ACTTGCAGTTGATACCCAAAAAG | 57.800 | 39.130 | 0.00 | 0.00 | 36.36 | 2.27 |
2763 | 5827 | 4.039124 | ACTTGCAGTTGATACCCAAAAAGG | 59.961 | 41.667 | 0.00 | 0.00 | 36.36 | 3.11 |
2764 | 5828 | 3.838565 | TGCAGTTGATACCCAAAAAGGA | 58.161 | 40.909 | 0.00 | 0.00 | 41.22 | 3.36 |
2765 | 5829 | 4.219115 | TGCAGTTGATACCCAAAAAGGAA | 58.781 | 39.130 | 0.00 | 0.00 | 41.22 | 3.36 |
2766 | 5830 | 4.651503 | TGCAGTTGATACCCAAAAAGGAAA | 59.348 | 37.500 | 0.00 | 0.00 | 41.22 | 3.13 |
2767 | 5831 | 5.129485 | TGCAGTTGATACCCAAAAAGGAAAA | 59.871 | 36.000 | 0.00 | 0.00 | 41.22 | 2.29 |
2768 | 5832 | 6.052360 | GCAGTTGATACCCAAAAAGGAAAAA | 58.948 | 36.000 | 0.00 | 0.00 | 41.22 | 1.94 |
2769 | 5833 | 6.018262 | GCAGTTGATACCCAAAAAGGAAAAAC | 60.018 | 38.462 | 0.00 | 0.00 | 41.22 | 2.43 |
2770 | 5834 | 7.272244 | CAGTTGATACCCAAAAAGGAAAAACT | 58.728 | 34.615 | 0.00 | 0.00 | 41.22 | 2.66 |
2771 | 5835 | 8.417884 | CAGTTGATACCCAAAAAGGAAAAACTA | 58.582 | 33.333 | 0.00 | 0.00 | 41.22 | 2.24 |
2772 | 5836 | 8.983789 | AGTTGATACCCAAAAAGGAAAAACTAA | 58.016 | 29.630 | 0.00 | 0.00 | 41.22 | 2.24 |
2773 | 5837 | 9.256477 | GTTGATACCCAAAAAGGAAAAACTAAG | 57.744 | 33.333 | 0.00 | 0.00 | 41.22 | 2.18 |
2774 | 5838 | 8.770010 | TGATACCCAAAAAGGAAAAACTAAGA | 57.230 | 30.769 | 0.00 | 0.00 | 41.22 | 2.10 |
2775 | 5839 | 9.374711 | TGATACCCAAAAAGGAAAAACTAAGAT | 57.625 | 29.630 | 0.00 | 0.00 | 41.22 | 2.40 |
2776 | 5840 | 9.639601 | GATACCCAAAAAGGAAAAACTAAGATG | 57.360 | 33.333 | 0.00 | 0.00 | 41.22 | 2.90 |
2777 | 5841 | 6.826668 | ACCCAAAAAGGAAAAACTAAGATGG | 58.173 | 36.000 | 0.00 | 0.00 | 41.22 | 3.51 |
2778 | 5842 | 6.613679 | ACCCAAAAAGGAAAAACTAAGATGGA | 59.386 | 34.615 | 0.00 | 0.00 | 41.22 | 3.41 |
2779 | 5843 | 6.929049 | CCCAAAAAGGAAAAACTAAGATGGAC | 59.071 | 38.462 | 0.00 | 0.00 | 41.22 | 4.02 |
2780 | 5844 | 6.929049 | CCAAAAAGGAAAAACTAAGATGGACC | 59.071 | 38.462 | 0.00 | 0.00 | 41.22 | 4.46 |
2781 | 5845 | 7.202001 | CCAAAAAGGAAAAACTAAGATGGACCT | 60.202 | 37.037 | 0.00 | 0.00 | 41.22 | 3.85 |
2782 | 5846 | 7.914427 | AAAAGGAAAAACTAAGATGGACCTT | 57.086 | 32.000 | 0.00 | 0.00 | 36.90 | 3.50 |
2783 | 5847 | 6.901081 | AAGGAAAAACTAAGATGGACCTTG | 57.099 | 37.500 | 0.00 | 0.00 | 34.57 | 3.61 |
2784 | 5848 | 5.325239 | AGGAAAAACTAAGATGGACCTTGG | 58.675 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
2785 | 5849 | 5.077564 | GGAAAAACTAAGATGGACCTTGGT | 58.922 | 41.667 | 0.00 | 0.00 | 39.13 | 3.67 |
2786 | 5850 | 5.183331 | GGAAAAACTAAGATGGACCTTGGTC | 59.817 | 44.000 | 11.13 | 11.13 | 36.95 | 4.02 |
2787 | 5851 | 4.302559 | AAACTAAGATGGACCTTGGTCC | 57.697 | 45.455 | 27.21 | 27.21 | 43.60 | 4.46 |
2788 | 5852 | 3.207044 | ACTAAGATGGACCTTGGTCCT | 57.793 | 47.619 | 31.56 | 20.50 | 43.68 | 3.85 |
2789 | 5853 | 3.532102 | ACTAAGATGGACCTTGGTCCTT | 58.468 | 45.455 | 31.56 | 27.02 | 43.68 | 3.36 |
2790 | 5854 | 4.695606 | ACTAAGATGGACCTTGGTCCTTA | 58.304 | 43.478 | 31.56 | 22.33 | 43.68 | 2.69 |
2791 | 5855 | 5.098663 | ACTAAGATGGACCTTGGTCCTTAA | 58.901 | 41.667 | 31.56 | 17.39 | 43.68 | 1.85 |
2792 | 5856 | 5.731678 | ACTAAGATGGACCTTGGTCCTTAAT | 59.268 | 40.000 | 31.56 | 20.69 | 43.68 | 1.40 |
2793 | 5857 | 4.779993 | AGATGGACCTTGGTCCTTAATC | 57.220 | 45.455 | 31.56 | 25.81 | 43.68 | 1.75 |
2794 | 5858 | 3.134804 | AGATGGACCTTGGTCCTTAATCG | 59.865 | 47.826 | 31.56 | 0.00 | 43.68 | 3.34 |
2795 | 5859 | 1.065709 | TGGACCTTGGTCCTTAATCGC | 60.066 | 52.381 | 31.56 | 10.04 | 43.68 | 4.58 |
2796 | 5860 | 1.065709 | GGACCTTGGTCCTTAATCGCA | 60.066 | 52.381 | 26.80 | 0.00 | 40.27 | 5.10 |
2797 | 5861 | 2.280628 | GACCTTGGTCCTTAATCGCAG | 58.719 | 52.381 | 8.54 | 0.00 | 0.00 | 5.18 |
2798 | 5862 | 1.017387 | CCTTGGTCCTTAATCGCAGC | 58.983 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2799 | 5863 | 1.678728 | CCTTGGTCCTTAATCGCAGCA | 60.679 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
2800 | 5864 | 1.667724 | CTTGGTCCTTAATCGCAGCAG | 59.332 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
2801 | 5865 | 0.744414 | TGGTCCTTAATCGCAGCAGC | 60.744 | 55.000 | 0.00 | 0.00 | 37.42 | 5.25 |
2802 | 5866 | 1.440145 | GGTCCTTAATCGCAGCAGCC | 61.440 | 60.000 | 0.00 | 0.00 | 37.52 | 4.85 |
2803 | 5867 | 1.153168 | TCCTTAATCGCAGCAGCCC | 60.153 | 57.895 | 0.00 | 0.00 | 37.52 | 5.19 |
2804 | 5868 | 1.451927 | CCTTAATCGCAGCAGCCCA | 60.452 | 57.895 | 0.00 | 0.00 | 37.52 | 5.36 |
2805 | 5869 | 1.718757 | CCTTAATCGCAGCAGCCCAC | 61.719 | 60.000 | 0.00 | 0.00 | 37.52 | 4.61 |
2806 | 5870 | 0.745845 | CTTAATCGCAGCAGCCCACT | 60.746 | 55.000 | 0.00 | 0.00 | 37.52 | 4.00 |
2816 | 5880 | 2.977178 | AGCCCACTGAGCTTCTCG | 59.023 | 61.111 | 0.00 | 0.00 | 37.24 | 4.04 |
2817 | 5881 | 1.910772 | AGCCCACTGAGCTTCTCGT | 60.911 | 57.895 | 0.00 | 0.00 | 37.24 | 4.18 |
2818 | 5882 | 1.446966 | GCCCACTGAGCTTCTCGTC | 60.447 | 63.158 | 0.00 | 0.00 | 32.35 | 4.20 |
2819 | 5883 | 1.967535 | CCCACTGAGCTTCTCGTCA | 59.032 | 57.895 | 0.00 | 0.00 | 32.35 | 4.35 |
2820 | 5884 | 0.318441 | CCCACTGAGCTTCTCGTCAA | 59.682 | 55.000 | 0.00 | 0.00 | 32.35 | 3.18 |
2821 | 5885 | 1.270305 | CCCACTGAGCTTCTCGTCAAA | 60.270 | 52.381 | 0.00 | 0.00 | 32.35 | 2.69 |
2822 | 5886 | 2.064762 | CCACTGAGCTTCTCGTCAAAG | 58.935 | 52.381 | 0.00 | 0.00 | 32.35 | 2.77 |
2823 | 5887 | 2.064762 | CACTGAGCTTCTCGTCAAAGG | 58.935 | 52.381 | 0.00 | 0.00 | 32.35 | 3.11 |
2824 | 5888 | 1.074752 | CTGAGCTTCTCGTCAAAGGC | 58.925 | 55.000 | 0.00 | 0.00 | 32.35 | 4.35 |
2825 | 5889 | 0.392706 | TGAGCTTCTCGTCAAAGGCA | 59.607 | 50.000 | 0.00 | 0.00 | 32.35 | 4.75 |
2826 | 5890 | 1.074752 | GAGCTTCTCGTCAAAGGCAG | 58.925 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2827 | 5891 | 0.952984 | AGCTTCTCGTCAAAGGCAGC | 60.953 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2828 | 5892 | 1.916697 | GCTTCTCGTCAAAGGCAGCC | 61.917 | 60.000 | 1.84 | 1.84 | 0.00 | 4.85 |
2829 | 5893 | 0.321122 | CTTCTCGTCAAAGGCAGCCT | 60.321 | 55.000 | 8.70 | 8.70 | 33.87 | 4.58 |
2830 | 5894 | 0.603707 | TTCTCGTCAAAGGCAGCCTG | 60.604 | 55.000 | 17.05 | 4.16 | 32.13 | 4.85 |
2831 | 5895 | 1.302033 | CTCGTCAAAGGCAGCCTGT | 60.302 | 57.895 | 17.05 | 6.48 | 32.13 | 4.00 |
2832 | 5896 | 1.294659 | CTCGTCAAAGGCAGCCTGTC | 61.295 | 60.000 | 17.05 | 5.07 | 32.13 | 3.51 |
2833 | 5897 | 1.597854 | CGTCAAAGGCAGCCTGTCA | 60.598 | 57.895 | 17.05 | 0.00 | 32.13 | 3.58 |
2834 | 5898 | 1.572085 | CGTCAAAGGCAGCCTGTCAG | 61.572 | 60.000 | 17.05 | 5.50 | 32.13 | 3.51 |
2835 | 5899 | 1.073722 | TCAAAGGCAGCCTGTCAGG | 59.926 | 57.895 | 17.05 | 15.15 | 38.80 | 3.86 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 8.218338 | TCGAGAAGGTATTCGTATAGTTCTTT | 57.782 | 34.615 | 7.58 | 0.00 | 40.58 | 2.52 |
1 | 2 | 7.798596 | TCGAGAAGGTATTCGTATAGTTCTT | 57.201 | 36.000 | 7.58 | 1.95 | 40.58 | 2.52 |
3 | 4 | 7.859598 | TCTTCGAGAAGGTATTCGTATAGTTC | 58.140 | 38.462 | 12.32 | 0.00 | 40.58 | 3.01 |
4 | 5 | 7.798596 | TCTTCGAGAAGGTATTCGTATAGTT | 57.201 | 36.000 | 12.32 | 0.00 | 40.58 | 2.24 |
5 | 6 | 7.798596 | TTCTTCGAGAAGGTATTCGTATAGT | 57.201 | 36.000 | 12.32 | 0.00 | 40.58 | 2.12 |
6 | 7 | 8.344098 | AGTTTCTTCGAGAAGGTATTCGTATAG | 58.656 | 37.037 | 12.32 | 0.00 | 40.58 | 1.31 |
7 | 8 | 8.127327 | CAGTTTCTTCGAGAAGGTATTCGTATA | 58.873 | 37.037 | 12.32 | 0.00 | 40.58 | 1.47 |
9 | 10 | 6.072286 | ACAGTTTCTTCGAGAAGGTATTCGTA | 60.072 | 38.462 | 12.32 | 0.00 | 40.58 | 3.43 |
10 | 11 | 5.162075 | CAGTTTCTTCGAGAAGGTATTCGT | 58.838 | 41.667 | 12.32 | 0.00 | 40.58 | 3.85 |
11 | 12 | 5.162075 | ACAGTTTCTTCGAGAAGGTATTCG | 58.838 | 41.667 | 12.32 | 0.00 | 40.58 | 3.34 |
12 | 13 | 6.752815 | CCTACAGTTTCTTCGAGAAGGTATTC | 59.247 | 42.308 | 12.32 | 1.27 | 35.37 | 1.75 |
13 | 14 | 6.210984 | ACCTACAGTTTCTTCGAGAAGGTATT | 59.789 | 38.462 | 12.32 | 0.00 | 35.37 | 1.89 |
14 | 15 | 5.715753 | ACCTACAGTTTCTTCGAGAAGGTAT | 59.284 | 40.000 | 12.32 | 0.00 | 35.37 | 2.73 |
15 | 16 | 5.075493 | ACCTACAGTTTCTTCGAGAAGGTA | 58.925 | 41.667 | 12.32 | 6.03 | 35.37 | 3.08 |
16 | 17 | 3.896272 | ACCTACAGTTTCTTCGAGAAGGT | 59.104 | 43.478 | 12.32 | 5.27 | 35.37 | 3.50 |
17 | 18 | 4.522722 | ACCTACAGTTTCTTCGAGAAGG | 57.477 | 45.455 | 12.32 | 0.00 | 35.37 | 3.46 |
18 | 19 | 7.313646 | TGAATACCTACAGTTTCTTCGAGAAG | 58.686 | 38.462 | 6.51 | 6.51 | 35.37 | 2.85 |
19 | 20 | 7.223260 | TGAATACCTACAGTTTCTTCGAGAA | 57.777 | 36.000 | 0.00 | 0.00 | 31.28 | 2.87 |
20 | 21 | 6.625300 | GCTGAATACCTACAGTTTCTTCGAGA | 60.625 | 42.308 | 0.00 | 0.00 | 36.62 | 4.04 |
21 | 22 | 5.517054 | GCTGAATACCTACAGTTTCTTCGAG | 59.483 | 44.000 | 0.00 | 0.00 | 36.62 | 4.04 |
22 | 23 | 5.408356 | GCTGAATACCTACAGTTTCTTCGA | 58.592 | 41.667 | 0.00 | 0.00 | 36.62 | 3.71 |
23 | 24 | 4.567159 | GGCTGAATACCTACAGTTTCTTCG | 59.433 | 45.833 | 0.00 | 0.00 | 36.62 | 3.79 |
24 | 25 | 4.876679 | GGGCTGAATACCTACAGTTTCTTC | 59.123 | 45.833 | 0.00 | 0.00 | 36.62 | 2.87 |
25 | 26 | 4.288626 | TGGGCTGAATACCTACAGTTTCTT | 59.711 | 41.667 | 0.00 | 0.00 | 36.62 | 2.52 |
26 | 27 | 3.844211 | TGGGCTGAATACCTACAGTTTCT | 59.156 | 43.478 | 0.00 | 0.00 | 36.62 | 2.52 |
27 | 28 | 4.216411 | TGGGCTGAATACCTACAGTTTC | 57.784 | 45.455 | 0.00 | 0.00 | 36.62 | 2.78 |
28 | 29 | 4.227300 | TCATGGGCTGAATACCTACAGTTT | 59.773 | 41.667 | 0.00 | 0.00 | 36.62 | 2.66 |
29 | 30 | 3.780294 | TCATGGGCTGAATACCTACAGTT | 59.220 | 43.478 | 0.00 | 0.00 | 36.62 | 3.16 |
30 | 31 | 3.134804 | GTCATGGGCTGAATACCTACAGT | 59.865 | 47.826 | 0.00 | 0.00 | 35.07 | 3.55 |
31 | 32 | 3.134623 | TGTCATGGGCTGAATACCTACAG | 59.865 | 47.826 | 0.00 | 0.00 | 35.07 | 2.74 |
32 | 33 | 3.111484 | TGTCATGGGCTGAATACCTACA | 58.889 | 45.455 | 0.00 | 0.00 | 35.07 | 2.74 |
33 | 34 | 3.838244 | TGTCATGGGCTGAATACCTAC | 57.162 | 47.619 | 0.00 | 0.00 | 35.07 | 3.18 |
34 | 35 | 4.853468 | TTTGTCATGGGCTGAATACCTA | 57.147 | 40.909 | 0.00 | 0.00 | 35.07 | 3.08 |
35 | 36 | 3.737559 | TTTGTCATGGGCTGAATACCT | 57.262 | 42.857 | 0.00 | 0.00 | 35.07 | 3.08 |
36 | 37 | 3.509575 | TGTTTTGTCATGGGCTGAATACC | 59.490 | 43.478 | 0.00 | 0.00 | 35.07 | 2.73 |
37 | 38 | 4.218417 | ACTGTTTTGTCATGGGCTGAATAC | 59.782 | 41.667 | 0.00 | 0.00 | 35.07 | 1.89 |
38 | 39 | 4.406456 | ACTGTTTTGTCATGGGCTGAATA | 58.594 | 39.130 | 0.00 | 0.00 | 35.07 | 1.75 |
39 | 40 | 3.233507 | ACTGTTTTGTCATGGGCTGAAT | 58.766 | 40.909 | 0.00 | 0.00 | 35.07 | 2.57 |
40 | 41 | 2.622942 | GACTGTTTTGTCATGGGCTGAA | 59.377 | 45.455 | 0.00 | 0.00 | 35.07 | 3.02 |
41 | 42 | 2.229792 | GACTGTTTTGTCATGGGCTGA | 58.770 | 47.619 | 0.00 | 0.00 | 36.97 | 4.26 |
42 | 43 | 1.069022 | CGACTGTTTTGTCATGGGCTG | 60.069 | 52.381 | 0.00 | 0.00 | 36.82 | 4.85 |
43 | 44 | 1.238439 | CGACTGTTTTGTCATGGGCT | 58.762 | 50.000 | 0.00 | 0.00 | 36.82 | 5.19 |
44 | 45 | 0.387239 | GCGACTGTTTTGTCATGGGC | 60.387 | 55.000 | 0.00 | 0.00 | 36.82 | 5.36 |
45 | 46 | 0.110238 | CGCGACTGTTTTGTCATGGG | 60.110 | 55.000 | 0.00 | 0.00 | 36.82 | 4.00 |
46 | 47 | 0.586319 | ACGCGACTGTTTTGTCATGG | 59.414 | 50.000 | 15.93 | 0.00 | 36.82 | 3.66 |
47 | 48 | 1.660052 | CCACGCGACTGTTTTGTCATG | 60.660 | 52.381 | 15.93 | 0.00 | 36.82 | 3.07 |
48 | 49 | 0.586319 | CCACGCGACTGTTTTGTCAT | 59.414 | 50.000 | 15.93 | 0.00 | 36.82 | 3.06 |
49 | 50 | 1.433053 | CCCACGCGACTGTTTTGTCA | 61.433 | 55.000 | 15.93 | 0.00 | 36.82 | 3.58 |
50 | 51 | 1.155424 | TCCCACGCGACTGTTTTGTC | 61.155 | 55.000 | 15.93 | 0.00 | 0.00 | 3.18 |
51 | 52 | 1.153329 | TCCCACGCGACTGTTTTGT | 60.153 | 52.632 | 15.93 | 0.00 | 0.00 | 2.83 |
52 | 53 | 1.569493 | CTCCCACGCGACTGTTTTG | 59.431 | 57.895 | 15.93 | 0.00 | 0.00 | 2.44 |
53 | 54 | 1.597027 | CCTCCCACGCGACTGTTTT | 60.597 | 57.895 | 15.93 | 0.00 | 0.00 | 2.43 |
54 | 55 | 2.030562 | CCTCCCACGCGACTGTTT | 59.969 | 61.111 | 15.93 | 0.00 | 0.00 | 2.83 |
55 | 56 | 4.003788 | CCCTCCCACGCGACTGTT | 62.004 | 66.667 | 15.93 | 0.00 | 0.00 | 3.16 |
64 | 65 | 1.966451 | CAGTTTCGTGCCCTCCCAC | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
65 | 66 | 2.429930 | CAGTTTCGTGCCCTCCCA | 59.570 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
66 | 67 | 3.056328 | GCAGTTTCGTGCCCTCCC | 61.056 | 66.667 | 0.00 | 0.00 | 37.49 | 4.30 |
67 | 68 | 2.281484 | TGCAGTTTCGTGCCCTCC | 60.281 | 61.111 | 0.00 | 0.00 | 43.28 | 4.30 |
68 | 69 | 2.328099 | CCTGCAGTTTCGTGCCCTC | 61.328 | 63.158 | 13.81 | 0.00 | 43.28 | 4.30 |
69 | 70 | 2.281761 | CCTGCAGTTTCGTGCCCT | 60.282 | 61.111 | 13.81 | 0.00 | 43.28 | 5.19 |
70 | 71 | 4.043200 | GCCTGCAGTTTCGTGCCC | 62.043 | 66.667 | 13.81 | 0.00 | 43.28 | 5.36 |
177 | 178 | 2.172483 | GAGGAAGTTCAGCTGGCCGA | 62.172 | 60.000 | 15.13 | 0.00 | 0.00 | 5.54 |
184 | 185 | 0.319900 | TGCAGTCGAGGAAGTTCAGC | 60.320 | 55.000 | 5.01 | 0.00 | 0.00 | 4.26 |
232 | 233 | 1.673665 | GCAGACCTGGTGGCTCTTG | 60.674 | 63.158 | 2.82 | 0.00 | 36.63 | 3.02 |
263 | 266 | 4.518970 | CAGTAATAAACACAAGCACCTGGT | 59.481 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
388 | 400 | 1.075536 | AGCCAAGGAAAACCAGTAGGG | 59.924 | 52.381 | 0.00 | 0.00 | 44.81 | 3.53 |
389 | 401 | 2.586648 | AGCCAAGGAAAACCAGTAGG | 57.413 | 50.000 | 0.00 | 0.00 | 42.21 | 3.18 |
413 | 425 | 2.729028 | TAGTACCCCGTACCAGTACC | 57.271 | 55.000 | 9.81 | 0.00 | 39.58 | 3.34 |
414 | 426 | 3.820557 | TCATAGTACCCCGTACCAGTAC | 58.179 | 50.000 | 6.62 | 6.62 | 39.58 | 2.73 |
415 | 427 | 4.729552 | ATCATAGTACCCCGTACCAGTA | 57.270 | 45.455 | 0.00 | 0.00 | 39.58 | 2.74 |
416 | 428 | 3.607490 | ATCATAGTACCCCGTACCAGT | 57.393 | 47.619 | 0.00 | 0.00 | 39.58 | 4.00 |
417 | 429 | 4.142227 | GCATATCATAGTACCCCGTACCAG | 60.142 | 50.000 | 0.00 | 0.00 | 39.58 | 4.00 |
418 | 430 | 3.765511 | GCATATCATAGTACCCCGTACCA | 59.234 | 47.826 | 0.00 | 0.00 | 39.58 | 3.25 |
517 | 534 | 2.373169 | TCTTCAGCTCCACAAACCATCT | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
562 | 697 | 4.170256 | GGACGAGACTAGCAGAAGAAAAG | 58.830 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
573 | 708 | 6.968250 | AGATTAAATAACCGGACGAGACTAG | 58.032 | 40.000 | 9.46 | 0.00 | 0.00 | 2.57 |
574 | 709 | 6.949352 | AGATTAAATAACCGGACGAGACTA | 57.051 | 37.500 | 9.46 | 0.00 | 0.00 | 2.59 |
580 | 715 | 7.201444 | GCAGATCATAGATTAAATAACCGGACG | 60.201 | 40.741 | 9.46 | 0.00 | 0.00 | 4.79 |
678 | 819 | 6.257849 | TGCGAAGGAAGTAATAACATGATGAC | 59.742 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
700 | 841 | 4.563337 | AGGTCATTGAATGATTCATGCG | 57.437 | 40.909 | 11.46 | 1.08 | 42.04 | 4.73 |
739 | 880 | 7.009174 | CACGAGAAGCAAAAACAGTTAAAACAT | 59.991 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
784 | 926 | 1.741706 | CCTACTGCCAAGCAATCTGTG | 59.258 | 52.381 | 0.00 | 0.00 | 38.41 | 3.66 |
785 | 927 | 1.630369 | TCCTACTGCCAAGCAATCTGT | 59.370 | 47.619 | 0.00 | 0.00 | 38.41 | 3.41 |
831 | 973 | 7.233962 | TCCACTGAGTACTGACCAATACTTTTA | 59.766 | 37.037 | 0.00 | 0.00 | 31.69 | 1.52 |
840 | 982 | 2.567169 | CCAATCCACTGAGTACTGACCA | 59.433 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
852 | 994 | 2.036256 | GCACAGCCCCAATCCACT | 59.964 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
875 | 1021 | 1.601903 | TCACGTTCAACAAGCATCCAC | 59.398 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
897 | 1043 | 1.969862 | GCCTTCAGCAAACATGGCT | 59.030 | 52.632 | 0.00 | 0.00 | 43.77 | 4.75 |
959 | 1105 | 3.008375 | TGTTGCTCTAACCTGAATGCTCT | 59.992 | 43.478 | 0.00 | 0.00 | 38.55 | 4.09 |
974 | 1120 | 1.737793 | CGGAAGTTATGGGTGTTGCTC | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
996 | 1142 | 1.000274 | GTGAAGTTGTTGGCCATGGAC | 60.000 | 52.381 | 18.40 | 15.32 | 0.00 | 4.02 |
997 | 1143 | 1.133513 | AGTGAAGTTGTTGGCCATGGA | 60.134 | 47.619 | 18.40 | 0.00 | 0.00 | 3.41 |
1161 | 1307 | 4.435436 | CAGCCGTAGCCGCTGACA | 62.435 | 66.667 | 2.16 | 0.00 | 41.25 | 3.58 |
1205 | 1351 | 1.204146 | GGCATCTGTACCCTCCTTCA | 58.796 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1214 | 1360 | 2.743938 | CCGACATGTAGGCATCTGTAC | 58.256 | 52.381 | 12.37 | 0.00 | 31.99 | 2.90 |
1377 | 1627 | 7.646130 | TCCTTAAGTTTGTTGTTCGCAATAAAG | 59.354 | 33.333 | 0.97 | 0.00 | 44.72 | 1.85 |
1385 | 1635 | 4.733405 | GCAGTTCCTTAAGTTTGTTGTTCG | 59.267 | 41.667 | 0.97 | 0.00 | 0.00 | 3.95 |
1390 | 1640 | 7.522236 | GCAAGATAGCAGTTCCTTAAGTTTGTT | 60.522 | 37.037 | 0.97 | 0.00 | 0.00 | 2.83 |
1391 | 1641 | 6.072452 | GCAAGATAGCAGTTCCTTAAGTTTGT | 60.072 | 38.462 | 0.97 | 0.00 | 0.00 | 2.83 |
1395 | 1645 | 5.165961 | TGCAAGATAGCAGTTCCTTAAGT | 57.834 | 39.130 | 0.97 | 0.00 | 40.11 | 2.24 |
1413 | 1663 | 1.264020 | GTGAAGCAGTCGTCATTGCAA | 59.736 | 47.619 | 0.00 | 0.00 | 42.67 | 4.08 |
1414 | 1664 | 0.867746 | GTGAAGCAGTCGTCATTGCA | 59.132 | 50.000 | 0.00 | 0.00 | 42.67 | 4.08 |
1651 | 1905 | 5.964958 | TTCATGGTGGTCTCTTTCATTTC | 57.035 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
1806 | 2060 | 1.686325 | CCCTGTCCAGTCCATACCGG | 61.686 | 65.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1850 | 2109 | 5.368256 | ACTGTTTGCACATCAATTCTCTC | 57.632 | 39.130 | 0.00 | 0.00 | 34.12 | 3.20 |
1929 | 4625 | 5.046304 | CCCTGTGAAGAAAGGTATCTGAGAA | 60.046 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1954 | 4650 | 1.134128 | TCCTTGACAGCTTGAAGCACA | 60.134 | 47.619 | 20.45 | 13.01 | 45.56 | 4.57 |
1983 | 4679 | 2.254546 | TGTCGTGAGGTGCTTGAATT | 57.745 | 45.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1999 | 4695 | 3.973657 | CATAATTGATGGGCAGCTTGTC | 58.026 | 45.455 | 0.00 | 0.00 | 31.20 | 3.18 |
2084 | 4915 | 2.688507 | AGTTGCACAAGTCGGATACTG | 58.311 | 47.619 | 0.00 | 0.00 | 38.88 | 2.74 |
2099 | 4930 | 2.098117 | ACACTTGACAGCTTGAAGTTGC | 59.902 | 45.455 | 9.01 | 3.15 | 28.70 | 4.17 |
2101 | 4932 | 3.609853 | TCACACTTGACAGCTTGAAGTT | 58.390 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
2141 | 4972 | 8.706936 | CACTGGACAGATGATAAAAATCGATAG | 58.293 | 37.037 | 6.29 | 0.00 | 0.00 | 2.08 |
2190 | 5039 | 0.976641 | AGCACACATTCCCGAAGAGA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
2261 | 5110 | 6.458342 | GCCAATAAGCCATAGTTACAGTCAAC | 60.458 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
2353 | 5284 | 5.746721 | CCTTGTAACTGTTTTTGGTTAGTGC | 59.253 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2388 | 5327 | 5.422331 | AGAAGTAGCACATTAGCCTCTTGTA | 59.578 | 40.000 | 0.00 | 0.00 | 31.52 | 2.41 |
2405 | 5361 | 4.730966 | TGGCCCTCTCTATACAGAAGTAG | 58.269 | 47.826 | 0.00 | 0.00 | 32.86 | 2.57 |
2439 | 5395 | 3.126831 | GACTCCGGCTCAATAACATCAG | 58.873 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2446 | 5402 | 0.179111 | CAAGCGACTCCGGCTCAATA | 60.179 | 55.000 | 0.00 | 0.00 | 40.53 | 1.90 |
2450 | 5406 | 2.095252 | GTTCAAGCGACTCCGGCTC | 61.095 | 63.158 | 0.00 | 0.00 | 40.53 | 4.70 |
2454 | 5410 | 0.994995 | CAGATGTTCAAGCGACTCCG | 59.005 | 55.000 | 0.00 | 0.00 | 39.16 | 4.63 |
2455 | 5411 | 2.370281 | TCAGATGTTCAAGCGACTCC | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2457 | 5413 | 4.184629 | GGTAATCAGATGTTCAAGCGACT | 58.815 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
2458 | 5414 | 3.309954 | GGGTAATCAGATGTTCAAGCGAC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
2459 | 5415 | 3.531538 | GGGTAATCAGATGTTCAAGCGA | 58.468 | 45.455 | 0.00 | 0.00 | 0.00 | 4.93 |
2461 | 5417 | 2.614057 | CGGGGTAATCAGATGTTCAAGC | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2462 | 5418 | 3.873910 | ACGGGGTAATCAGATGTTCAAG | 58.126 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2464 | 5420 | 3.262151 | TCAACGGGGTAATCAGATGTTCA | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2465 | 5421 | 3.869065 | TCAACGGGGTAATCAGATGTTC | 58.131 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2466 | 5422 | 3.370527 | CCTCAACGGGGTAATCAGATGTT | 60.371 | 47.826 | 0.00 | 0.00 | 0.00 | 2.71 |
2467 | 5423 | 2.170607 | CCTCAACGGGGTAATCAGATGT | 59.829 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2468 | 5424 | 2.170607 | ACCTCAACGGGGTAATCAGATG | 59.829 | 50.000 | 0.00 | 0.00 | 35.00 | 2.90 |
2481 | 5466 | 2.260844 | ATGGCATCCATACCTCAACG | 57.739 | 50.000 | 0.00 | 0.00 | 43.19 | 4.10 |
2483 | 5468 | 4.464008 | GAGAAATGGCATCCATACCTCAA | 58.536 | 43.478 | 0.00 | 0.00 | 44.40 | 3.02 |
2487 | 5472 | 2.519013 | GGGAGAAATGGCATCCATACC | 58.481 | 52.381 | 0.00 | 1.41 | 44.40 | 2.73 |
2493 | 5478 | 1.463674 | AACACGGGAGAAATGGCATC | 58.536 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2494 | 5479 | 1.545582 | CAAACACGGGAGAAATGGCAT | 59.454 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2497 | 5482 | 2.226330 | TGTCAAACACGGGAGAAATGG | 58.774 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2500 | 5485 | 2.992124 | TCTGTCAAACACGGGAGAAA | 57.008 | 45.000 | 0.00 | 0.00 | 31.32 | 2.52 |
2501 | 5486 | 2.766313 | CATCTGTCAAACACGGGAGAA | 58.234 | 47.619 | 0.00 | 0.00 | 31.32 | 2.87 |
2502 | 5487 | 1.608025 | GCATCTGTCAAACACGGGAGA | 60.608 | 52.381 | 0.00 | 0.00 | 31.32 | 3.71 |
2503 | 5488 | 0.798776 | GCATCTGTCAAACACGGGAG | 59.201 | 55.000 | 0.00 | 0.00 | 31.32 | 4.30 |
2504 | 5489 | 0.396435 | AGCATCTGTCAAACACGGGA | 59.604 | 50.000 | 0.00 | 0.00 | 31.32 | 5.14 |
2505 | 5490 | 2.002586 | CTAGCATCTGTCAAACACGGG | 58.997 | 52.381 | 0.00 | 0.00 | 31.32 | 5.28 |
2506 | 5491 | 2.002586 | CCTAGCATCTGTCAAACACGG | 58.997 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2507 | 5492 | 2.688507 | ACCTAGCATCTGTCAAACACG | 58.311 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
2508 | 5493 | 3.189287 | CCAACCTAGCATCTGTCAAACAC | 59.811 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2509 | 5494 | 3.411446 | CCAACCTAGCATCTGTCAAACA | 58.589 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2510 | 5495 | 2.749621 | CCCAACCTAGCATCTGTCAAAC | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2511 | 5496 | 2.290896 | CCCCAACCTAGCATCTGTCAAA | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2512 | 5497 | 1.281867 | CCCCAACCTAGCATCTGTCAA | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2514 | 5499 | 0.181350 | CCCCCAACCTAGCATCTGTC | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2515 | 5500 | 0.550147 | ACCCCCAACCTAGCATCTGT | 60.550 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2516 | 5501 | 0.181350 | GACCCCCAACCTAGCATCTG | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2518 | 5503 | 0.470341 | GAGACCCCCAACCTAGCATC | 59.530 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2519 | 5504 | 0.044855 | AGAGACCCCCAACCTAGCAT | 59.955 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2520 | 5505 | 0.178873 | AAGAGACCCCCAACCTAGCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
2523 | 5508 | 0.494551 | TGGAAGAGACCCCCAACCTA | 59.505 | 55.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2524 | 5509 | 0.178831 | ATGGAAGAGACCCCCAACCT | 60.179 | 55.000 | 0.00 | 0.00 | 33.15 | 3.50 |
2525 | 5510 | 0.704664 | AATGGAAGAGACCCCCAACC | 59.295 | 55.000 | 0.00 | 0.00 | 33.15 | 3.77 |
2526 | 5511 | 1.075536 | ACAATGGAAGAGACCCCCAAC | 59.924 | 52.381 | 0.00 | 0.00 | 33.15 | 3.77 |
2527 | 5512 | 1.075374 | CACAATGGAAGAGACCCCCAA | 59.925 | 52.381 | 0.00 | 0.00 | 33.15 | 4.12 |
2530 | 5515 | 2.558359 | CAAACACAATGGAAGAGACCCC | 59.442 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
2531 | 5516 | 3.253432 | GTCAAACACAATGGAAGAGACCC | 59.747 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
2532 | 5517 | 3.882888 | TGTCAAACACAATGGAAGAGACC | 59.117 | 43.478 | 0.00 | 0.00 | 29.30 | 3.85 |
2535 | 5520 | 5.471116 | TCATCTGTCAAACACAATGGAAGAG | 59.529 | 40.000 | 0.00 | 0.00 | 33.31 | 2.85 |
2565 | 5621 | 2.035066 | GGCAGAAATGGCATCCATACAC | 59.965 | 50.000 | 0.00 | 0.00 | 44.40 | 2.90 |
2566 | 5622 | 2.309613 | GGCAGAAATGGCATCCATACA | 58.690 | 47.619 | 0.00 | 0.00 | 44.40 | 2.29 |
2567 | 5623 | 1.267806 | CGGCAGAAATGGCATCCATAC | 59.732 | 52.381 | 0.00 | 0.00 | 44.40 | 2.39 |
2568 | 5624 | 1.133823 | ACGGCAGAAATGGCATCCATA | 60.134 | 47.619 | 0.00 | 0.00 | 44.40 | 2.74 |
2578 | 5634 | 2.840974 | CCGAGAACACGGCAGAAAT | 58.159 | 52.632 | 0.00 | 0.00 | 46.20 | 2.17 |
2605 | 5661 | 9.691362 | ATAATAACCAAGCAAACAACAACTAAG | 57.309 | 29.630 | 0.00 | 0.00 | 0.00 | 2.18 |
2606 | 5662 | 9.685828 | GATAATAACCAAGCAAACAACAACTAA | 57.314 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2615 | 5671 | 6.431198 | TCCGAAGATAATAACCAAGCAAAC | 57.569 | 37.500 | 0.00 | 0.00 | 0.00 | 2.93 |
2635 | 5691 | 5.171476 | AGTACAAACATGACAGATCTTCCG | 58.829 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2643 | 5699 | 3.184379 | CACCACGAGTACAAACATGACAG | 59.816 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2645 | 5701 | 3.128349 | ACACCACGAGTACAAACATGAC | 58.872 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2646 | 5702 | 3.462483 | ACACCACGAGTACAAACATGA | 57.538 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
2647 | 5703 | 4.545823 | AAACACCACGAGTACAAACATG | 57.454 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
2648 | 5704 | 5.570234 | AAAAACACCACGAGTACAAACAT | 57.430 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
2654 | 5710 | 1.528161 | CCCGAAAAACACCACGAGTAC | 59.472 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
2655 | 5711 | 1.540797 | CCCCGAAAAACACCACGAGTA | 60.541 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
2656 | 5712 | 0.816421 | CCCCGAAAAACACCACGAGT | 60.816 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2657 | 5713 | 0.816421 | ACCCCGAAAAACACCACGAG | 60.816 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2659 | 5715 | 1.357334 | CACCCCGAAAAACACCACG | 59.643 | 57.895 | 0.00 | 0.00 | 0.00 | 4.94 |
2660 | 5716 | 1.066752 | GCACCCCGAAAAACACCAC | 59.933 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
2669 | 5730 | 1.841556 | ACTGGAGAAGCACCCCGAA | 60.842 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
2670 | 5731 | 2.203788 | ACTGGAGAAGCACCCCGA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 5.14 |
2674 | 5735 | 0.398318 | AGGAACACTGGAGAAGCACC | 59.602 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2691 | 5752 | 2.425143 | TTATTCAGGCCAAGAGCAGG | 57.575 | 50.000 | 5.01 | 0.00 | 46.50 | 4.85 |
2692 | 5753 | 4.789012 | TTTTTATTCAGGCCAAGAGCAG | 57.211 | 40.909 | 5.01 | 0.00 | 46.50 | 4.24 |
2712 | 5776 | 4.069304 | ACATACACACATTACACGGCTTT | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
2713 | 5777 | 3.670625 | ACATACACACATTACACGGCTT | 58.329 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
2714 | 5778 | 3.328382 | ACATACACACATTACACGGCT | 57.672 | 42.857 | 0.00 | 0.00 | 0.00 | 5.52 |
2717 | 5781 | 8.014322 | AGTAAGAAACATACACACATTACACG | 57.986 | 34.615 | 0.00 | 0.00 | 0.00 | 4.49 |
2718 | 5782 | 9.594038 | CAAGTAAGAAACATACACACATTACAC | 57.406 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2719 | 5783 | 8.286800 | GCAAGTAAGAAACATACACACATTACA | 58.713 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2720 | 5784 | 8.286800 | TGCAAGTAAGAAACATACACACATTAC | 58.713 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2721 | 5785 | 8.384607 | TGCAAGTAAGAAACATACACACATTA | 57.615 | 30.769 | 0.00 | 0.00 | 0.00 | 1.90 |
2722 | 5786 | 7.270757 | TGCAAGTAAGAAACATACACACATT | 57.729 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2743 | 5807 | 3.838565 | TCCTTTTTGGGTATCAACTGCA | 58.161 | 40.909 | 0.00 | 0.00 | 34.67 | 4.41 |
2744 | 5808 | 4.864704 | TTCCTTTTTGGGTATCAACTGC | 57.135 | 40.909 | 0.00 | 0.00 | 34.67 | 4.40 |
2745 | 5809 | 7.272244 | AGTTTTTCCTTTTTGGGTATCAACTG | 58.728 | 34.615 | 0.00 | 0.00 | 34.67 | 3.16 |
2746 | 5810 | 7.432148 | AGTTTTTCCTTTTTGGGTATCAACT | 57.568 | 32.000 | 0.00 | 0.00 | 34.67 | 3.16 |
2747 | 5811 | 9.256477 | CTTAGTTTTTCCTTTTTGGGTATCAAC | 57.744 | 33.333 | 0.00 | 0.00 | 34.67 | 3.18 |
2748 | 5812 | 9.203163 | TCTTAGTTTTTCCTTTTTGGGTATCAA | 57.797 | 29.630 | 0.00 | 0.00 | 36.20 | 2.57 |
2749 | 5813 | 8.770010 | TCTTAGTTTTTCCTTTTTGGGTATCA | 57.230 | 30.769 | 0.00 | 0.00 | 36.20 | 2.15 |
2750 | 5814 | 9.639601 | CATCTTAGTTTTTCCTTTTTGGGTATC | 57.360 | 33.333 | 0.00 | 0.00 | 36.20 | 2.24 |
2751 | 5815 | 8.593679 | CCATCTTAGTTTTTCCTTTTTGGGTAT | 58.406 | 33.333 | 0.00 | 0.00 | 36.20 | 2.73 |
2752 | 5816 | 7.785506 | TCCATCTTAGTTTTTCCTTTTTGGGTA | 59.214 | 33.333 | 0.00 | 0.00 | 36.20 | 3.69 |
2753 | 5817 | 6.613679 | TCCATCTTAGTTTTTCCTTTTTGGGT | 59.386 | 34.615 | 0.00 | 0.00 | 36.20 | 4.51 |
2754 | 5818 | 6.929049 | GTCCATCTTAGTTTTTCCTTTTTGGG | 59.071 | 38.462 | 0.00 | 0.00 | 36.20 | 4.12 |
2755 | 5819 | 6.929049 | GGTCCATCTTAGTTTTTCCTTTTTGG | 59.071 | 38.462 | 0.00 | 0.00 | 37.10 | 3.28 |
2756 | 5820 | 7.726216 | AGGTCCATCTTAGTTTTTCCTTTTTG | 58.274 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
2757 | 5821 | 7.914427 | AGGTCCATCTTAGTTTTTCCTTTTT | 57.086 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2758 | 5822 | 7.202001 | CCAAGGTCCATCTTAGTTTTTCCTTTT | 60.202 | 37.037 | 0.00 | 0.00 | 31.59 | 2.27 |
2759 | 5823 | 6.267699 | CCAAGGTCCATCTTAGTTTTTCCTTT | 59.732 | 38.462 | 0.00 | 0.00 | 31.59 | 3.11 |
2760 | 5824 | 5.775195 | CCAAGGTCCATCTTAGTTTTTCCTT | 59.225 | 40.000 | 0.00 | 0.00 | 33.79 | 3.36 |
2761 | 5825 | 5.162980 | ACCAAGGTCCATCTTAGTTTTTCCT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2762 | 5826 | 5.077564 | ACCAAGGTCCATCTTAGTTTTTCC | 58.922 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
2763 | 5827 | 6.255596 | GACCAAGGTCCATCTTAGTTTTTC | 57.744 | 41.667 | 8.06 | 0.00 | 39.08 | 2.29 |
2777 | 5841 | 2.280628 | CTGCGATTAAGGACCAAGGTC | 58.719 | 52.381 | 10.80 | 10.80 | 43.87 | 3.85 |
2778 | 5842 | 1.679032 | GCTGCGATTAAGGACCAAGGT | 60.679 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
2779 | 5843 | 1.017387 | GCTGCGATTAAGGACCAAGG | 58.983 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2780 | 5844 | 1.667724 | CTGCTGCGATTAAGGACCAAG | 59.332 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
2781 | 5845 | 1.737838 | CTGCTGCGATTAAGGACCAA | 58.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2782 | 5846 | 0.744414 | GCTGCTGCGATTAAGGACCA | 60.744 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2783 | 5847 | 1.440145 | GGCTGCTGCGATTAAGGACC | 61.440 | 60.000 | 9.65 | 0.00 | 40.82 | 4.46 |
2784 | 5848 | 1.440145 | GGGCTGCTGCGATTAAGGAC | 61.440 | 60.000 | 9.65 | 0.00 | 40.82 | 3.85 |
2785 | 5849 | 1.153168 | GGGCTGCTGCGATTAAGGA | 60.153 | 57.895 | 9.65 | 0.00 | 40.82 | 3.36 |
2786 | 5850 | 1.451927 | TGGGCTGCTGCGATTAAGG | 60.452 | 57.895 | 9.65 | 0.00 | 40.82 | 2.69 |
2787 | 5851 | 0.745845 | AGTGGGCTGCTGCGATTAAG | 60.746 | 55.000 | 9.65 | 0.00 | 40.82 | 1.85 |
2788 | 5852 | 1.026182 | CAGTGGGCTGCTGCGATTAA | 61.026 | 55.000 | 9.65 | 0.00 | 40.82 | 1.40 |
2789 | 5853 | 1.450134 | CAGTGGGCTGCTGCGATTA | 60.450 | 57.895 | 9.65 | 0.00 | 40.82 | 1.75 |
2790 | 5854 | 2.749044 | CAGTGGGCTGCTGCGATT | 60.749 | 61.111 | 9.65 | 0.00 | 40.82 | 3.34 |
2791 | 5855 | 3.677284 | CTCAGTGGGCTGCTGCGAT | 62.677 | 63.158 | 9.65 | 0.00 | 42.29 | 4.58 |
2792 | 5856 | 4.383861 | CTCAGTGGGCTGCTGCGA | 62.384 | 66.667 | 9.65 | 0.00 | 42.29 | 5.10 |
2794 | 5858 | 4.719106 | AGCTCAGTGGGCTGCTGC | 62.719 | 66.667 | 19.04 | 7.10 | 42.29 | 5.25 |
2795 | 5859 | 2.033757 | AAGCTCAGTGGGCTGCTG | 59.966 | 61.111 | 20.65 | 0.00 | 42.29 | 4.41 |
2796 | 5860 | 2.222727 | AGAAGCTCAGTGGGCTGCT | 61.223 | 57.895 | 20.86 | 20.86 | 40.58 | 4.24 |
2797 | 5861 | 1.744741 | GAGAAGCTCAGTGGGCTGC | 60.745 | 63.158 | 20.65 | 18.28 | 42.29 | 5.25 |
2798 | 5862 | 1.447489 | CGAGAAGCTCAGTGGGCTG | 60.447 | 63.158 | 20.65 | 1.16 | 43.87 | 4.85 |
2799 | 5863 | 1.882989 | GACGAGAAGCTCAGTGGGCT | 61.883 | 60.000 | 13.10 | 13.10 | 42.31 | 5.19 |
2800 | 5864 | 1.446966 | GACGAGAAGCTCAGTGGGC | 60.447 | 63.158 | 6.98 | 6.98 | 0.00 | 5.36 |
2801 | 5865 | 0.318441 | TTGACGAGAAGCTCAGTGGG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2802 | 5866 | 2.064762 | CTTTGACGAGAAGCTCAGTGG | 58.935 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
2803 | 5867 | 2.064762 | CCTTTGACGAGAAGCTCAGTG | 58.935 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
2804 | 5868 | 1.606737 | GCCTTTGACGAGAAGCTCAGT | 60.607 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2805 | 5869 | 1.074752 | GCCTTTGACGAGAAGCTCAG | 58.925 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2806 | 5870 | 0.392706 | TGCCTTTGACGAGAAGCTCA | 59.607 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2807 | 5871 | 1.074752 | CTGCCTTTGACGAGAAGCTC | 58.925 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2808 | 5872 | 0.952984 | GCTGCCTTTGACGAGAAGCT | 60.953 | 55.000 | 0.00 | 0.00 | 0.00 | 3.74 |
2809 | 5873 | 1.499502 | GCTGCCTTTGACGAGAAGC | 59.500 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
2810 | 5874 | 0.321122 | AGGCTGCCTTTGACGAGAAG | 60.321 | 55.000 | 17.22 | 0.00 | 0.00 | 2.85 |
2811 | 5875 | 0.603707 | CAGGCTGCCTTTGACGAGAA | 60.604 | 55.000 | 20.79 | 0.00 | 0.00 | 2.87 |
2812 | 5876 | 1.004560 | CAGGCTGCCTTTGACGAGA | 60.005 | 57.895 | 20.79 | 0.00 | 0.00 | 4.04 |
2813 | 5877 | 1.294659 | GACAGGCTGCCTTTGACGAG | 61.295 | 60.000 | 20.79 | 8.51 | 0.00 | 4.18 |
2814 | 5878 | 1.301716 | GACAGGCTGCCTTTGACGA | 60.302 | 57.895 | 20.79 | 0.00 | 0.00 | 4.20 |
2815 | 5879 | 1.572085 | CTGACAGGCTGCCTTTGACG | 61.572 | 60.000 | 20.79 | 10.11 | 0.00 | 4.35 |
2816 | 5880 | 1.239968 | CCTGACAGGCTGCCTTTGAC | 61.240 | 60.000 | 20.79 | 10.85 | 0.00 | 3.18 |
2817 | 5881 | 1.073722 | CCTGACAGGCTGCCTTTGA | 59.926 | 57.895 | 20.79 | 6.06 | 0.00 | 2.69 |
2818 | 5882 | 3.677527 | CCTGACAGGCTGCCTTTG | 58.322 | 61.111 | 20.79 | 12.71 | 0.00 | 2.77 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.