Multiple sequence alignment - TraesCS5D01G366600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G366600 chr5D 100.000 6579 0 0 1 6579 443354091 443360669 0.000000e+00 12150.0
1 TraesCS5D01G366600 chr5D 83.258 2216 343 20 3115 5311 432032096 432029890 0.000000e+00 2012.0
2 TraesCS5D01G366600 chr5D 87.162 444 52 4 1535 1976 432033074 432032634 3.540000e-137 499.0
3 TraesCS5D01G366600 chr5D 86.461 421 57 0 1118 1538 432033660 432033240 4.650000e-126 462.0
4 TraesCS5D01G366600 chr5D 88.889 63 7 0 558 620 327630785 327630847 1.970000e-10 78.7
5 TraesCS5D01G366600 chr5D 97.436 39 0 1 2094 2131 551375903 551375865 1.530000e-06 65.8
6 TraesCS5D01G366600 chr5B 94.428 3123 141 8 2209 5329 539801621 539804712 0.000000e+00 4772.0
7 TraesCS5D01G366600 chr5B 93.904 1378 49 5 802 2179 539799858 539801200 0.000000e+00 2047.0
8 TraesCS5D01G366600 chr5B 81.333 1500 243 25 2927 4408 523933792 523935272 0.000000e+00 1184.0
9 TraesCS5D01G366600 chr5B 96.651 627 21 0 5332 5958 539804752 539805378 0.000000e+00 1042.0
10 TraesCS5D01G366600 chr5B 82.861 671 74 21 1 637 491579843 491579180 1.240000e-156 564.0
11 TraesCS5D01G366600 chr5B 86.927 436 53 3 1535 1968 523932980 523933413 2.760000e-133 486.0
12 TraesCS5D01G366600 chr5A 82.927 2214 334 33 3120 5311 547119229 547117038 0.000000e+00 1954.0
13 TraesCS5D01G366600 chr5A 85.102 443 66 0 1535 1977 547120194 547119752 2.800000e-123 453.0
14 TraesCS5D01G366600 chr3B 97.333 525 13 1 6015 6538 607486378 607486902 0.000000e+00 891.0
15 TraesCS5D01G366600 chr3B 96.964 527 12 3 6015 6538 60857462 60857987 0.000000e+00 881.0
16 TraesCS5D01G366600 chr3B 96.952 525 15 1 6015 6538 519435690 519436214 0.000000e+00 880.0
17 TraesCS5D01G366600 chr3B 96.571 525 17 1 6015 6538 100976080 100976604 0.000000e+00 869.0
18 TraesCS5D01G366600 chr3B 89.497 457 47 1 1 457 586748652 586748197 1.590000e-160 577.0
19 TraesCS5D01G366600 chr4D 96.952 525 15 1 6015 6538 414061871 414061347 0.000000e+00 880.0
20 TraesCS5D01G366600 chr4D 85.017 594 71 11 1 578 7099510 7098919 7.350000e-164 588.0
21 TraesCS5D01G366600 chr4D 94.000 50 2 1 6531 6579 17560275 17560324 2.540000e-09 75.0
22 TraesCS5D01G366600 chr4D 95.556 45 2 0 6535 6579 83149511 83149467 9.150000e-09 73.1
23 TraesCS5D01G366600 chr2B 96.768 526 16 1 6014 6538 390632731 390632206 0.000000e+00 876.0
24 TraesCS5D01G366600 chr2B 89.059 457 50 0 1 457 744393331 744392875 9.570000e-158 568.0
25 TraesCS5D01G366600 chr2B 88.621 457 52 0 1 457 246117963 246117507 2.070000e-154 556.0
26 TraesCS5D01G366600 chr2B 94.737 38 1 1 2094 2130 661782354 661782317 2.560000e-04 58.4
27 TraesCS5D01G366600 chr4B 96.762 525 14 2 6015 6538 670050299 670049777 0.000000e+00 872.0
28 TraesCS5D01G366600 chr1B 96.190 525 19 1 6015 6538 649661280 649661804 0.000000e+00 857.0
29 TraesCS5D01G366600 chr1B 72.021 1326 329 36 3320 4621 16892020 16893327 8.110000e-94 355.0
30 TraesCS5D01G366600 chr1A 96.190 525 19 1 6015 6538 31256175 31256699 0.000000e+00 857.0
31 TraesCS5D01G366600 chr1A 72.235 1329 323 39 3320 4621 12569362 12568053 1.040000e-97 368.0
32 TraesCS5D01G366600 chr1A 70.787 1715 432 53 3317 4989 13415816 13417503 1.770000e-85 327.0
33 TraesCS5D01G366600 chr3D 85.432 556 68 11 1 549 573702370 573702919 3.440000e-157 566.0
34 TraesCS5D01G366600 chr3D 77.563 517 91 15 2 502 511263643 511263136 8.350000e-74 289.0
35 TraesCS5D01G366600 chr3D 75.812 277 27 13 384 620 54850310 54850034 3.250000e-18 104.0
36 TraesCS5D01G366600 chr3D 90.625 64 6 0 493 556 30170828 30170891 1.180000e-12 86.1
37 TraesCS5D01G366600 chr3D 95.556 45 2 0 6535 6579 18778627 18778671 9.150000e-09 73.1
38 TraesCS5D01G366600 chrUn 83.467 623 84 14 6 621 333940465 333941075 4.450000e-156 562.0
39 TraesCS5D01G366600 chrUn 83.307 623 85 14 6 621 333923952 333924562 2.070000e-154 556.0
40 TraesCS5D01G366600 chrUn 83.146 623 86 14 6 621 401697914 401697304 9.640000e-153 551.0
41 TraesCS5D01G366600 chrUn 85.714 56 7 1 2077 2131 47895180 47895235 2.560000e-04 58.4
42 TraesCS5D01G366600 chr6D 89.286 448 46 2 1 448 89211653 89212098 1.600000e-155 560.0
43 TraesCS5D01G366600 chr2D 84.337 581 62 16 1 556 184130375 184129799 5.800000e-150 542.0
44 TraesCS5D01G366600 chr2D 73.343 724 180 13 1139 1857 11613600 11612885 8.470000e-64 255.0
45 TraesCS5D01G366600 chr7B 80.899 623 103 9 1 621 684306799 684307407 1.660000e-130 477.0
46 TraesCS5D01G366600 chr7A 76.612 667 142 14 3304 3963 32019859 32019200 8.110000e-94 355.0
47 TraesCS5D01G366600 chr7A 97.778 45 1 0 6535 6579 495505194 495505238 1.970000e-10 78.7
48 TraesCS5D01G366600 chr7A 95.556 45 2 0 6535 6579 11372920 11372876 9.150000e-09 73.1
49 TraesCS5D01G366600 chr4A 87.387 111 10 2 627 733 614235152 614235042 2.490000e-24 124.0
50 TraesCS5D01G366600 chr7D 95.556 45 2 0 6535 6579 591210036 591210080 9.150000e-09 73.1
51 TraesCS5D01G366600 chr6A 95.556 45 2 0 6535 6579 36241008 36240964 9.150000e-09 73.1
52 TraesCS5D01G366600 chr6A 95.556 45 2 0 6535 6579 97740129 97740173 9.150000e-09 73.1
53 TraesCS5D01G366600 chr6A 92.683 41 1 1 2093 2131 574698747 574698787 2.560000e-04 58.4
54 TraesCS5D01G366600 chr2A 95.556 45 2 0 6535 6579 19919117 19919161 9.150000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G366600 chr5D 443354091 443360669 6578 False 12150.000000 12150 100.000000 1 6579 1 chr5D.!!$F2 6578
1 TraesCS5D01G366600 chr5D 432029890 432033660 3770 True 991.000000 2012 85.627000 1118 5311 3 chr5D.!!$R2 4193
2 TraesCS5D01G366600 chr5B 539799858 539805378 5520 False 2620.333333 4772 94.994333 802 5958 3 chr5B.!!$F2 5156
3 TraesCS5D01G366600 chr5B 523932980 523935272 2292 False 835.000000 1184 84.130000 1535 4408 2 chr5B.!!$F1 2873
4 TraesCS5D01G366600 chr5B 491579180 491579843 663 True 564.000000 564 82.861000 1 637 1 chr5B.!!$R1 636
5 TraesCS5D01G366600 chr5A 547117038 547120194 3156 True 1203.500000 1954 84.014500 1535 5311 2 chr5A.!!$R1 3776
6 TraesCS5D01G366600 chr3B 607486378 607486902 524 False 891.000000 891 97.333000 6015 6538 1 chr3B.!!$F4 523
7 TraesCS5D01G366600 chr3B 60857462 60857987 525 False 881.000000 881 96.964000 6015 6538 1 chr3B.!!$F1 523
8 TraesCS5D01G366600 chr3B 519435690 519436214 524 False 880.000000 880 96.952000 6015 6538 1 chr3B.!!$F3 523
9 TraesCS5D01G366600 chr3B 100976080 100976604 524 False 869.000000 869 96.571000 6015 6538 1 chr3B.!!$F2 523
10 TraesCS5D01G366600 chr4D 414061347 414061871 524 True 880.000000 880 96.952000 6015 6538 1 chr4D.!!$R3 523
11 TraesCS5D01G366600 chr4D 7098919 7099510 591 True 588.000000 588 85.017000 1 578 1 chr4D.!!$R1 577
12 TraesCS5D01G366600 chr2B 390632206 390632731 525 True 876.000000 876 96.768000 6014 6538 1 chr2B.!!$R2 524
13 TraesCS5D01G366600 chr4B 670049777 670050299 522 True 872.000000 872 96.762000 6015 6538 1 chr4B.!!$R1 523
14 TraesCS5D01G366600 chr1B 649661280 649661804 524 False 857.000000 857 96.190000 6015 6538 1 chr1B.!!$F2 523
15 TraesCS5D01G366600 chr1B 16892020 16893327 1307 False 355.000000 355 72.021000 3320 4621 1 chr1B.!!$F1 1301
16 TraesCS5D01G366600 chr1A 31256175 31256699 524 False 857.000000 857 96.190000 6015 6538 1 chr1A.!!$F2 523
17 TraesCS5D01G366600 chr1A 12568053 12569362 1309 True 368.000000 368 72.235000 3320 4621 1 chr1A.!!$R1 1301
18 TraesCS5D01G366600 chr1A 13415816 13417503 1687 False 327.000000 327 70.787000 3317 4989 1 chr1A.!!$F1 1672
19 TraesCS5D01G366600 chr3D 573702370 573702919 549 False 566.000000 566 85.432000 1 549 1 chr3D.!!$F3 548
20 TraesCS5D01G366600 chr3D 511263136 511263643 507 True 289.000000 289 77.563000 2 502 1 chr3D.!!$R2 500
21 TraesCS5D01G366600 chrUn 333940465 333941075 610 False 562.000000 562 83.467000 6 621 1 chrUn.!!$F3 615
22 TraesCS5D01G366600 chrUn 333923952 333924562 610 False 556.000000 556 83.307000 6 621 1 chrUn.!!$F2 615
23 TraesCS5D01G366600 chrUn 401697304 401697914 610 True 551.000000 551 83.146000 6 621 1 chrUn.!!$R1 615
24 TraesCS5D01G366600 chr2D 184129799 184130375 576 True 542.000000 542 84.337000 1 556 1 chr2D.!!$R2 555
25 TraesCS5D01G366600 chr2D 11612885 11613600 715 True 255.000000 255 73.343000 1139 1857 1 chr2D.!!$R1 718
26 TraesCS5D01G366600 chr7B 684306799 684307407 608 False 477.000000 477 80.899000 1 621 1 chr7B.!!$F1 620
27 TraesCS5D01G366600 chr7A 32019200 32019859 659 True 355.000000 355 76.612000 3304 3963 1 chr7A.!!$R2 659

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 796 0.041090 AGGGGGCATCGGACAATTTT 59.959 50.000 0.00 0.00 0.00 1.82 F
747 797 0.175531 GGGGGCATCGGACAATTTTG 59.824 55.000 0.00 0.00 0.00 2.44 F
799 849 0.179006 GGATAGACGGGTCCGGTACT 60.179 60.000 14.25 11.59 44.69 2.73 F
912 962 0.329261 ACACTATGTGCTGGCCATGT 59.671 50.000 5.51 1.24 36.98 3.21 F
2785 3438 0.319555 CGTCGGCATACCATGGTAGG 60.320 60.000 28.23 28.23 35.73 3.18 F
2890 3543 0.032952 GTGGCAGACGTGGTTACTGA 59.967 55.000 5.46 0.00 34.07 3.41 F
4762 5455 1.520787 GTACCCCCGCGATGTCTTG 60.521 63.158 8.23 0.00 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2129 2381 0.036306 CAAACGAGTAGGGCAGGGTT 59.964 55.0 0.00 0.00 0.00 4.11 R
2130 2382 1.125711 ACAAACGAGTAGGGCAGGGT 61.126 55.0 0.00 0.00 0.00 4.34 R
2769 3422 1.048601 AGACCTACCATGGTATGCCG 58.951 55.0 24.78 12.92 41.00 5.69 R
2871 3524 0.032952 TCAGTAACCACGTCTGCCAC 59.967 55.0 0.00 0.00 0.00 5.01 R
4553 5231 0.809385 CACAATGCTTGGAGAGGCAG 59.191 55.0 0.00 0.00 41.88 4.85 R
4778 5471 1.108776 GCATGCCATGTGGTCTGAAT 58.891 50.0 6.36 0.00 37.57 2.57 R
6547 7291 0.112606 AGTGGAGCTATAGCCGGCTA 59.887 55.0 36.88 36.88 43.38 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 0.477597 TCCCTCACTCCAAACCCCAT 60.478 55.000 0.00 0.00 0.00 4.00
36 37 1.203505 TCCCTCACTCCAAACCCCATA 60.204 52.381 0.00 0.00 0.00 2.74
72 73 4.641645 CAACCAGCCACCTCGCCA 62.642 66.667 0.00 0.00 0.00 5.69
224 225 3.066190 CTACCTCCACCGCCGTCA 61.066 66.667 0.00 0.00 0.00 4.35
233 234 4.147449 CCGCCGTCATGCAGGAGA 62.147 66.667 0.00 0.00 0.00 3.71
291 292 1.813092 GCAGCAGCATGGCATACTAGT 60.813 52.381 0.00 0.00 41.58 2.57
300 301 1.576757 TGGCATACTAGTCCACCCCTA 59.423 52.381 0.00 0.00 0.00 3.53
379 382 2.360350 CCAGCACCGCCAACATCT 60.360 61.111 0.00 0.00 0.00 2.90
382 385 3.058160 GCACCGCCAACATCTGCT 61.058 61.111 0.00 0.00 0.00 4.24
462 512 4.096003 GCCTAGACCAAGCGGGCA 62.096 66.667 0.00 0.00 46.60 5.36
649 699 4.717629 CAGCGACGACGGCAAGGA 62.718 66.667 9.67 0.00 40.15 3.36
650 700 4.421479 AGCGACGACGGCAAGGAG 62.421 66.667 9.67 0.00 40.15 3.69
652 702 4.796231 CGACGACGGCAAGGAGGG 62.796 72.222 0.00 0.00 35.72 4.30
653 703 3.379445 GACGACGGCAAGGAGGGA 61.379 66.667 0.00 0.00 0.00 4.20
654 704 3.358076 GACGACGGCAAGGAGGGAG 62.358 68.421 0.00 0.00 0.00 4.30
655 705 4.148825 CGACGGCAAGGAGGGAGG 62.149 72.222 0.00 0.00 0.00 4.30
656 706 3.787001 GACGGCAAGGAGGGAGGG 61.787 72.222 0.00 0.00 0.00 4.30
657 707 4.332543 ACGGCAAGGAGGGAGGGA 62.333 66.667 0.00 0.00 0.00 4.20
658 708 3.009115 CGGCAAGGAGGGAGGGAA 61.009 66.667 0.00 0.00 0.00 3.97
659 709 3.002371 GGCAAGGAGGGAGGGAAG 58.998 66.667 0.00 0.00 0.00 3.46
660 710 2.684499 GGCAAGGAGGGAGGGAAGG 61.684 68.421 0.00 0.00 0.00 3.46
661 711 2.684499 GCAAGGAGGGAGGGAAGGG 61.684 68.421 0.00 0.00 0.00 3.95
662 712 2.003548 CAAGGAGGGAGGGAAGGGG 61.004 68.421 0.00 0.00 0.00 4.79
663 713 3.289454 AAGGAGGGAGGGAAGGGGG 62.289 68.421 0.00 0.00 0.00 5.40
664 714 3.707189 GGAGGGAGGGAAGGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
665 715 2.040359 GAGGGAGGGAAGGGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
666 716 3.711782 AGGGAGGGAAGGGGGAGG 61.712 72.222 0.00 0.00 0.00 4.30
667 717 4.845307 GGGAGGGAAGGGGGAGGG 62.845 77.778 0.00 0.00 0.00 4.30
668 718 4.845307 GGAGGGAAGGGGGAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
669 719 4.845307 GAGGGAAGGGGGAGGGGG 62.845 77.778 0.00 0.00 0.00 5.40
671 721 4.381121 GGGAAGGGGGAGGGGGAA 62.381 72.222 0.00 0.00 0.00 3.97
672 722 2.696504 GGAAGGGGGAGGGGGAAG 60.697 72.222 0.00 0.00 0.00 3.46
673 723 2.696504 GAAGGGGGAGGGGGAAGG 60.697 72.222 0.00 0.00 0.00 3.46
674 724 3.224269 AAGGGGGAGGGGGAAGGA 61.224 66.667 0.00 0.00 0.00 3.36
675 725 3.289454 AAGGGGGAGGGGGAAGGAG 62.289 68.421 0.00 0.00 0.00 3.69
676 726 4.845307 GGGGGAGGGGGAAGGAGG 62.845 77.778 0.00 0.00 0.00 4.30
678 728 4.760220 GGGAGGGGGAAGGAGGCA 62.760 72.222 0.00 0.00 0.00 4.75
679 729 2.368878 GGAGGGGGAAGGAGGCAT 60.369 66.667 0.00 0.00 0.00 4.40
680 730 2.456443 GGAGGGGGAAGGAGGCATC 61.456 68.421 0.00 0.00 0.00 3.91
681 731 2.770048 AGGGGGAAGGAGGCATCG 60.770 66.667 0.00 0.00 0.00 3.84
682 732 3.878667 GGGGGAAGGAGGCATCGG 61.879 72.222 0.00 0.00 0.00 4.18
683 733 3.878667 GGGGAAGGAGGCATCGGG 61.879 72.222 0.00 0.00 0.00 5.14
684 734 3.878667 GGGAAGGAGGCATCGGGG 61.879 72.222 0.00 0.00 0.00 5.73
685 735 3.878667 GGAAGGAGGCATCGGGGG 61.879 72.222 0.00 0.00 0.00 5.40
686 736 4.570874 GAAGGAGGCATCGGGGGC 62.571 72.222 0.00 0.00 0.00 5.80
725 775 4.813526 CGACGCGGTCACGAGAGG 62.814 72.222 12.47 0.00 42.82 3.69
726 776 4.477975 GACGCGGTCACGAGAGGG 62.478 72.222 12.47 0.00 42.82 4.30
733 783 4.779733 TCACGAGAGGGAGGGGGC 62.780 72.222 0.00 0.00 39.71 5.80
735 785 4.095400 ACGAGAGGGAGGGGGCAT 62.095 66.667 0.00 0.00 0.00 4.40
736 786 3.237741 CGAGAGGGAGGGGGCATC 61.238 72.222 0.00 0.00 0.00 3.91
737 787 3.237741 GAGAGGGAGGGGGCATCG 61.238 72.222 0.00 0.00 0.00 3.84
738 788 4.888325 AGAGGGAGGGGGCATCGG 62.888 72.222 0.00 0.00 0.00 4.18
739 789 4.880426 GAGGGAGGGGGCATCGGA 62.880 72.222 0.00 0.00 0.00 4.55
742 792 3.407967 GGAGGGGGCATCGGACAA 61.408 66.667 0.00 0.00 0.00 3.18
743 793 2.757124 GGAGGGGGCATCGGACAAT 61.757 63.158 0.00 0.00 0.00 2.71
744 794 1.227383 GAGGGGGCATCGGACAATT 59.773 57.895 0.00 0.00 0.00 2.32
745 795 0.395724 GAGGGGGCATCGGACAATTT 60.396 55.000 0.00 0.00 0.00 1.82
746 796 0.041090 AGGGGGCATCGGACAATTTT 59.959 50.000 0.00 0.00 0.00 1.82
747 797 0.175531 GGGGGCATCGGACAATTTTG 59.824 55.000 0.00 0.00 0.00 2.44
748 798 1.181786 GGGGCATCGGACAATTTTGA 58.818 50.000 0.00 0.00 0.00 2.69
749 799 1.548269 GGGGCATCGGACAATTTTGAA 59.452 47.619 0.00 0.00 0.00 2.69
750 800 2.606108 GGGCATCGGACAATTTTGAAC 58.394 47.619 0.00 0.00 0.00 3.18
751 801 2.606108 GGCATCGGACAATTTTGAACC 58.394 47.619 0.00 0.18 0.00 3.62
752 802 2.606108 GCATCGGACAATTTTGAACCC 58.394 47.619 0.00 0.00 0.00 4.11
753 803 2.673893 GCATCGGACAATTTTGAACCCC 60.674 50.000 0.00 0.00 0.00 4.95
754 804 2.668144 TCGGACAATTTTGAACCCCT 57.332 45.000 0.00 0.00 0.00 4.79
755 805 3.791953 TCGGACAATTTTGAACCCCTA 57.208 42.857 0.00 0.00 0.00 3.53
756 806 3.681593 TCGGACAATTTTGAACCCCTAG 58.318 45.455 0.00 0.00 0.00 3.02
757 807 2.163613 CGGACAATTTTGAACCCCTAGC 59.836 50.000 0.00 0.00 0.00 3.42
758 808 3.431415 GGACAATTTTGAACCCCTAGCT 58.569 45.455 0.00 0.00 0.00 3.32
759 809 3.444034 GGACAATTTTGAACCCCTAGCTC 59.556 47.826 0.00 0.00 0.00 4.09
760 810 4.079253 GACAATTTTGAACCCCTAGCTCA 58.921 43.478 0.00 0.00 0.00 4.26
761 811 4.677182 ACAATTTTGAACCCCTAGCTCAT 58.323 39.130 0.00 0.00 0.00 2.90
762 812 4.706962 ACAATTTTGAACCCCTAGCTCATC 59.293 41.667 0.00 0.00 0.00 2.92
763 813 4.870021 ATTTTGAACCCCTAGCTCATCT 57.130 40.909 0.00 0.00 0.00 2.90
764 814 5.975988 ATTTTGAACCCCTAGCTCATCTA 57.024 39.130 0.00 0.00 0.00 1.98
765 815 5.772393 TTTTGAACCCCTAGCTCATCTAA 57.228 39.130 0.00 0.00 0.00 2.10
766 816 5.975988 TTTGAACCCCTAGCTCATCTAAT 57.024 39.130 0.00 0.00 0.00 1.73
767 817 4.963318 TGAACCCCTAGCTCATCTAATG 57.037 45.455 0.00 0.00 0.00 1.90
768 818 4.298626 TGAACCCCTAGCTCATCTAATGT 58.701 43.478 0.00 0.00 0.00 2.71
769 819 4.101585 TGAACCCCTAGCTCATCTAATGTG 59.898 45.833 0.00 0.00 0.00 3.21
770 820 3.658725 ACCCCTAGCTCATCTAATGTGT 58.341 45.455 0.00 0.00 0.00 3.72
771 821 3.643792 ACCCCTAGCTCATCTAATGTGTC 59.356 47.826 0.00 0.00 0.00 3.67
772 822 3.007398 CCCCTAGCTCATCTAATGTGTCC 59.993 52.174 0.00 0.00 0.00 4.02
773 823 3.643320 CCCTAGCTCATCTAATGTGTCCA 59.357 47.826 0.00 0.00 0.00 4.02
774 824 4.285517 CCCTAGCTCATCTAATGTGTCCAT 59.714 45.833 0.00 0.00 0.00 3.41
775 825 5.221803 CCCTAGCTCATCTAATGTGTCCATT 60.222 44.000 0.00 0.00 43.62 3.16
776 826 5.931146 CCTAGCTCATCTAATGTGTCCATTC 59.069 44.000 0.00 0.00 41.50 2.67
777 827 5.627182 AGCTCATCTAATGTGTCCATTCT 57.373 39.130 0.00 0.00 41.50 2.40
778 828 6.737720 AGCTCATCTAATGTGTCCATTCTA 57.262 37.500 0.00 0.00 41.50 2.10
779 829 6.757237 AGCTCATCTAATGTGTCCATTCTAG 58.243 40.000 0.00 0.00 41.50 2.43
780 830 5.931146 GCTCATCTAATGTGTCCATTCTAGG 59.069 44.000 0.00 0.00 41.50 3.02
781 831 6.425210 TCATCTAATGTGTCCATTCTAGGG 57.575 41.667 0.00 0.00 41.50 3.53
782 832 6.143206 TCATCTAATGTGTCCATTCTAGGGA 58.857 40.000 0.00 0.00 41.50 4.20
783 833 6.789457 TCATCTAATGTGTCCATTCTAGGGAT 59.211 38.462 0.00 0.00 41.50 3.85
784 834 7.955750 TCATCTAATGTGTCCATTCTAGGGATA 59.044 37.037 0.00 0.00 41.50 2.59
785 835 7.782897 TCTAATGTGTCCATTCTAGGGATAG 57.217 40.000 0.00 0.00 41.50 2.08
786 836 7.535738 TCTAATGTGTCCATTCTAGGGATAGA 58.464 38.462 0.00 0.00 41.50 1.98
787 837 6.426646 AATGTGTCCATTCTAGGGATAGAC 57.573 41.667 0.00 0.00 36.56 2.59
788 838 3.889538 TGTGTCCATTCTAGGGATAGACG 59.110 47.826 0.00 0.00 36.67 4.18
789 839 3.256136 GTGTCCATTCTAGGGATAGACGG 59.744 52.174 0.00 0.00 36.67 4.79
790 840 2.826725 GTCCATTCTAGGGATAGACGGG 59.173 54.545 0.00 0.00 36.67 5.28
791 841 2.449730 TCCATTCTAGGGATAGACGGGT 59.550 50.000 0.00 0.00 0.00 5.28
792 842 2.826725 CCATTCTAGGGATAGACGGGTC 59.173 54.545 0.00 0.00 0.00 4.46
793 843 2.671896 TTCTAGGGATAGACGGGTCC 57.328 55.000 0.00 0.00 0.00 4.46
794 844 0.399454 TCTAGGGATAGACGGGTCCG 59.601 60.000 7.97 7.97 46.03 4.79
795 845 0.608582 CTAGGGATAGACGGGTCCGG 60.609 65.000 14.25 0.00 44.69 5.14
796 846 1.355718 TAGGGATAGACGGGTCCGGT 61.356 60.000 14.25 8.43 44.69 5.28
797 847 1.151450 GGGATAGACGGGTCCGGTA 59.849 63.158 14.25 5.40 44.69 4.02
798 848 1.175347 GGGATAGACGGGTCCGGTAC 61.175 65.000 14.25 0.00 44.69 3.34
799 849 0.179006 GGATAGACGGGTCCGGTACT 60.179 60.000 14.25 11.59 44.69 2.73
800 850 0.950116 GATAGACGGGTCCGGTACTG 59.050 60.000 14.25 3.11 44.69 2.74
801 851 0.466922 ATAGACGGGTCCGGTACTGG 60.467 60.000 15.21 15.21 44.69 4.00
802 852 1.852157 TAGACGGGTCCGGTACTGGT 61.852 60.000 20.40 0.00 44.69 4.00
803 853 2.203684 ACGGGTCCGGTACTGGTT 60.204 61.111 20.40 0.00 44.69 3.67
804 854 2.263540 CGGGTCCGGTACTGGTTG 59.736 66.667 20.40 5.39 35.56 3.77
805 855 2.277591 CGGGTCCGGTACTGGTTGA 61.278 63.158 20.40 0.00 35.56 3.18
806 856 1.610554 CGGGTCCGGTACTGGTTGAT 61.611 60.000 20.40 0.00 35.56 2.57
807 857 0.616891 GGGTCCGGTACTGGTTGATT 59.383 55.000 20.40 0.00 0.00 2.57
808 858 1.406477 GGGTCCGGTACTGGTTGATTC 60.406 57.143 20.40 5.19 0.00 2.52
809 859 1.553704 GGTCCGGTACTGGTTGATTCT 59.446 52.381 20.40 0.00 0.00 2.40
810 860 2.618053 GTCCGGTACTGGTTGATTCTG 58.382 52.381 20.40 0.00 0.00 3.02
811 861 2.028385 GTCCGGTACTGGTTGATTCTGT 60.028 50.000 20.40 0.00 0.00 3.41
818 868 6.235664 GGTACTGGTTGATTCTGTTTCCTTA 58.764 40.000 0.00 0.00 0.00 2.69
854 904 1.137086 AGACGCACATACACTCATCCC 59.863 52.381 0.00 0.00 0.00 3.85
912 962 0.329261 ACACTATGTGCTGGCCATGT 59.671 50.000 5.51 1.24 36.98 3.21
932 982 3.949586 TGGTGGATCCATAATGCAAGA 57.050 42.857 19.62 0.00 41.93 3.02
975 1025 2.012673 GTGTGCTGTCCATCTCATTCC 58.987 52.381 0.00 0.00 0.00 3.01
976 1026 1.911357 TGTGCTGTCCATCTCATTCCT 59.089 47.619 0.00 0.00 0.00 3.36
985 1035 3.708631 TCCATCTCATTCCTCTCCTTGAC 59.291 47.826 0.00 0.00 0.00 3.18
1007 1057 6.151480 TGACAATGACAAGTTCATATGCACAT 59.849 34.615 8.23 0.00 44.86 3.21
1038 1088 8.159447 ACAACACATAGCAAGATATCCACATAT 58.841 33.333 0.00 0.00 0.00 1.78
1079 1129 3.837731 TGTGTGAGAGAGAGAGAGAGAGA 59.162 47.826 0.00 0.00 0.00 3.10
1080 1130 4.081476 TGTGTGAGAGAGAGAGAGAGAGAG 60.081 50.000 0.00 0.00 0.00 3.20
1081 1131 4.160439 GTGTGAGAGAGAGAGAGAGAGAGA 59.840 50.000 0.00 0.00 0.00 3.10
1082 1132 4.403752 TGTGAGAGAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
1083 1133 4.646945 GTGAGAGAGAGAGAGAGAGAGAGA 59.353 50.000 0.00 0.00 0.00 3.10
1084 1134 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
1085 1135 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1086 1136 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1087 1137 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1088 1138 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1089 1139 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1090 1140 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1091 1141 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1092 1142 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1093 1143 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1094 1144 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1095 1145 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1096 1146 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1097 1147 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1098 1148 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1099 1149 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1100 1150 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1101 1151 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1102 1152 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1103 1153 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1104 1154 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1245 1295 6.234177 TCTCATGCGAGAGATGAAGACTATA 58.766 40.000 4.00 0.00 43.55 1.31
1290 1340 1.067669 GATGTGGCGAGTGATCAGCTA 59.932 52.381 0.00 0.00 0.00 3.32
1398 1448 2.152016 GATGGCTCTAATAAACCCGCC 58.848 52.381 0.00 0.00 38.01 6.13
1443 1493 0.911769 TCGTGGAGAAGATGGCCAAT 59.088 50.000 10.96 0.00 32.68 3.16
1492 1542 3.461061 CAGATTTCTAGCGCCATCAAGA 58.539 45.455 2.29 0.00 0.00 3.02
1500 1550 0.379669 GCGCCATCAAGAACATCCAG 59.620 55.000 0.00 0.00 0.00 3.86
1620 1839 4.159857 GAGCTCTGTACACTGAAGTTACG 58.840 47.826 6.43 0.00 0.00 3.18
1691 1910 8.646900 GTTATTGTCCTTAGGAGATGAAGATCT 58.353 37.037 0.00 0.00 42.02 2.75
1738 1957 2.758979 TCTGTAGTTGGATTCGGAGGAC 59.241 50.000 0.00 0.00 0.00 3.85
2020 2269 3.689649 GGAAGCGGTCACTTAATGATTGT 59.310 43.478 0.00 0.00 40.28 2.71
2028 2277 7.015289 CGGTCACTTAATGATTGTGTTAACTG 58.985 38.462 7.22 0.00 40.28 3.16
2084 2336 6.128090 CGTCCTACTCATTTATAGCCGTATGA 60.128 42.308 0.00 0.00 0.00 2.15
2101 2353 6.140786 CCGTATGAATCATTTTGATGCAGAG 58.859 40.000 0.00 0.00 45.05 3.35
2104 2356 3.181494 TGAATCATTTTGATGCAGAGGCG 60.181 43.478 0.00 0.00 37.50 5.52
2313 2959 6.321435 TCTCAAGACATATTAAAGCGGAGAGA 59.679 38.462 0.00 0.00 0.00 3.10
2326 2972 5.092554 AGCGGAGAGATTATCGAGATCTA 57.907 43.478 12.53 0.00 34.13 1.98
2331 2977 7.255104 GCGGAGAGATTATCGAGATCTATTCAT 60.255 40.741 12.53 0.00 34.13 2.57
2392 3045 4.041444 TGCTCACCTTGCCCAAAATAAATT 59.959 37.500 0.00 0.00 0.00 1.82
2437 3090 9.434559 GTTTCTTAACAAGTCATGTGTACTTTC 57.565 33.333 0.00 0.00 42.99 2.62
2438 3091 8.958119 TTCTTAACAAGTCATGTGTACTTTCT 57.042 30.769 0.00 0.00 42.99 2.52
2474 3127 4.929211 TCACTATTGGTCACAGAATTGTCG 59.071 41.667 0.00 0.00 34.62 4.35
2484 3137 5.805486 GTCACAGAATTGTCGTCTATTGCTA 59.195 40.000 0.00 0.00 34.62 3.49
2529 3182 9.506018 AAATTTGGGTTCTCTCAAATATTTTGG 57.494 29.630 6.51 0.00 41.15 3.28
2533 3186 6.014669 TGGGTTCTCTCAAATATTTTGGGTTG 60.015 38.462 0.00 0.00 0.00 3.77
2624 3277 9.836076 CAAAATGATGTGCATATATAGACCAAG 57.164 33.333 0.00 0.00 35.78 3.61
2627 3280 8.783833 ATGATGTGCATATATAGACCAAGTTC 57.216 34.615 0.00 0.00 34.82 3.01
2629 3282 9.088987 TGATGTGCATATATAGACCAAGTTCTA 57.911 33.333 0.00 0.00 32.56 2.10
2657 3310 3.811083 TGTACATTTTGTGGAACCGAGT 58.189 40.909 0.00 0.00 34.36 4.18
2665 3318 1.202758 TGTGGAACCGAGTTGATTGCT 60.203 47.619 0.00 0.00 34.36 3.91
2707 3360 1.101635 CATGCTGAGGCCCATGTGAG 61.102 60.000 10.60 0.00 35.33 3.51
2708 3361 2.827642 GCTGAGGCCCATGTGAGC 60.828 66.667 0.00 0.00 0.00 4.26
2715 3368 4.758251 CCCATGTGAGCGCGGTGA 62.758 66.667 18.92 3.42 0.00 4.02
2746 3399 5.447624 TGCTCGTAGTAAGCAGCATATAA 57.552 39.130 0.00 0.00 44.51 0.98
2769 3422 4.767478 AGGGCTCTAGAAAAATTACCGTC 58.233 43.478 0.00 0.00 0.00 4.79
2771 3424 3.554731 GGCTCTAGAAAAATTACCGTCGG 59.445 47.826 10.48 10.48 0.00 4.79
2785 3438 0.319555 CGTCGGCATACCATGGTAGG 60.320 60.000 28.23 28.23 35.73 3.18
2805 3458 4.504858 AGGTCTTGCTTGGATTAGTTACG 58.495 43.478 0.00 0.00 0.00 3.18
2813 3466 3.364889 TGGATTAGTTACGCCAGATCG 57.635 47.619 0.00 0.00 0.00 3.69
2826 3479 1.470098 CCAGATCGAAACAGGGCTTTG 59.530 52.381 0.00 0.00 0.00 2.77
2844 3497 4.678044 GCTTTGGTCTCTGTCATCGTATCA 60.678 45.833 0.00 0.00 0.00 2.15
2863 3516 4.123497 TCACTGACTAGCATTACGCATT 57.877 40.909 0.00 0.00 46.13 3.56
2864 3517 4.503910 TCACTGACTAGCATTACGCATTT 58.496 39.130 0.00 0.00 46.13 2.32
2869 3522 5.179533 TGACTAGCATTACGCATTTTACCA 58.820 37.500 0.00 0.00 46.13 3.25
2871 3524 3.398954 AGCATTACGCATTTTACCACG 57.601 42.857 0.00 0.00 46.13 4.94
2890 3543 0.032952 GTGGCAGACGTGGTTACTGA 59.967 55.000 5.46 0.00 34.07 3.41
2898 3551 4.988540 CAGACGTGGTTACTGATCTTCAAA 59.011 41.667 0.00 0.00 34.07 2.69
2960 3613 5.605534 CTCCAGATTGTGAATTCGATACCT 58.394 41.667 0.04 0.00 0.00 3.08
3065 3721 9.083080 GTTTAATATTTTGCAACTACATGGGTC 57.917 33.333 0.00 0.00 0.00 4.46
3087 3743 3.710044 CATGTCGTCCATGCCTCG 58.290 61.111 5.20 0.00 44.21 4.63
3095 3751 3.244579 GTCGTCCATGCCTCGTTATTTAC 59.755 47.826 0.00 0.00 0.00 2.01
3100 3756 4.814234 TCCATGCCTCGTTATTTACACATC 59.186 41.667 0.00 0.00 0.00 3.06
3102 3758 4.209307 TGCCTCGTTATTTACACATCCA 57.791 40.909 0.00 0.00 0.00 3.41
3103 3759 4.188462 TGCCTCGTTATTTACACATCCAG 58.812 43.478 0.00 0.00 0.00 3.86
3154 3810 7.933577 ACAGACATCTTATTCTCAGTTCACAAA 59.066 33.333 0.00 0.00 0.00 2.83
3161 3820 9.230122 TCTTATTCTCAGTTCACAAATAATGCA 57.770 29.630 0.00 0.00 0.00 3.96
3192 3851 2.375146 AGATTATTGACGGGTTTGGCC 58.625 47.619 0.00 0.00 0.00 5.36
3195 3854 2.406596 TATTGACGGGTTTGGCCTAC 57.593 50.000 3.32 1.58 37.43 3.18
3252 3923 7.919313 CATATGGTTTCTTGTGTTCATATGC 57.081 36.000 0.00 0.00 38.15 3.14
3349 4020 8.474831 TCGTCGTAATTGATGATATATGGGATT 58.525 33.333 0.00 0.00 0.00 3.01
3450 4121 7.020010 GCATATTGAGTGTATCTAAAGCATGC 58.980 38.462 10.51 10.51 34.57 4.06
3647 4318 4.873746 TTGCTAGTCTTCTTGCTACTGT 57.126 40.909 0.00 0.00 41.55 3.55
4085 4757 9.355215 GGATAGTAATAAGGATATGACGTGTTG 57.645 37.037 0.00 0.00 29.29 3.33
4136 4808 7.710907 TCTCCAAAATATTGAGTTAGATCCACG 59.289 37.037 0.00 0.00 38.94 4.94
4160 4832 6.402550 CGAACCACACCTCTCATTAATTCAAG 60.403 42.308 0.00 0.00 0.00 3.02
4161 4833 5.880901 ACCACACCTCTCATTAATTCAAGT 58.119 37.500 0.00 0.00 0.00 3.16
4190 4862 4.870991 GTCTCAAGTAAGGTCCATTACTGC 59.129 45.833 5.25 0.00 43.53 4.40
4272 4944 5.114764 TGGATTTGAGTGGATGCAATCTA 57.885 39.130 15.71 5.45 44.71 1.98
4627 5308 3.801594 GCTCGAGATTCACTTCCTTCATC 59.198 47.826 18.75 0.00 0.00 2.92
4762 5455 1.520787 GTACCCCCGCGATGTCTTG 60.521 63.158 8.23 0.00 0.00 3.02
4778 5471 6.348458 CGATGTCTTGGCAAATTTGAGTTCTA 60.348 38.462 22.31 0.00 0.00 2.10
4820 5513 4.997905 CTACATTGCCGATGTGGATAAG 57.002 45.455 7.87 0.00 46.80 1.73
4857 5550 6.183361 CCTCACATCTATCAAACCTATCCACA 60.183 42.308 0.00 0.00 0.00 4.17
5034 5730 0.111061 ATTGTCAGCCAGCCACTCAA 59.889 50.000 0.00 0.00 0.00 3.02
5216 5922 3.638860 TCATAGTTAAGGAGGCCGAGAA 58.361 45.455 0.00 0.00 0.00 2.87
5329 6035 1.269778 ACCGTGCGATACTCATCATGG 60.270 52.381 0.00 0.00 40.49 3.66
5345 6088 0.038599 ATGGACCTGCACATGCTTCA 59.961 50.000 5.31 0.00 42.66 3.02
5407 6150 8.098286 TCAATTTTGCATCTCAATCTCCAAATT 58.902 29.630 0.00 0.00 34.12 1.82
5424 6167 8.270030 TCTCCAAATTTAGACACTGATGATGAT 58.730 33.333 0.00 0.00 0.00 2.45
5454 6197 7.371159 ACGATGACTATTATGATGACGACATT 58.629 34.615 1.10 0.00 36.82 2.71
5495 6238 6.830838 GGAAAAAGAATGGATCTGGAGTATGT 59.169 38.462 0.00 0.00 38.79 2.29
5496 6239 7.993183 GGAAAAAGAATGGATCTGGAGTATGTA 59.007 37.037 0.00 0.00 38.79 2.29
5512 6255 7.148474 TGGAGTATGTACGCTTTCTTTCATTTC 60.148 37.037 0.00 0.00 0.00 2.17
5523 6266 7.357859 CGCTTTCTTTCATTTCATTCTTGACAC 60.358 37.037 0.00 0.00 0.00 3.67
5556 6299 6.266786 TCGTTTTAGATCCCAGCTCACATATA 59.733 38.462 0.00 0.00 0.00 0.86
5614 6357 2.094854 ACGGAGAAAGACACATACGGAC 60.095 50.000 0.00 0.00 0.00 4.79
5700 6443 1.280421 ACTAAGGCCCTTCTTGCTCTG 59.720 52.381 0.00 0.00 0.00 3.35
5714 6457 0.040958 GCTCTGCTCCAACAACGTTG 60.041 55.000 26.20 26.20 0.00 4.10
5726 6469 2.750948 ACAACGTTGTTCAGTATCGCT 58.249 42.857 27.70 0.70 38.47 4.93
5727 6470 3.128349 ACAACGTTGTTCAGTATCGCTT 58.872 40.909 27.70 0.48 38.47 4.68
5753 6496 5.499139 TTTAGAGGTTTCACTGCTTGTTG 57.501 39.130 0.00 0.00 0.00 3.33
5765 6508 5.530915 TCACTGCTTGTTGTATTGCTACTTT 59.469 36.000 0.00 0.00 0.00 2.66
5800 6543 5.008613 TCGTTCATTTGCTTGCTCTAGTTTT 59.991 36.000 0.00 0.00 0.00 2.43
5875 6618 2.217750 TCTTGTCCACACCATGTTTCG 58.782 47.619 0.00 0.00 0.00 3.46
5958 6701 7.702348 GCAGTAATGAACAGAGTTTCTTTGTTT 59.298 33.333 0.00 0.00 38.59 2.83
5959 6702 9.573133 CAGTAATGAACAGAGTTTCTTTGTTTT 57.427 29.630 7.02 2.72 38.59 2.43
5983 6726 9.461312 TTTAGTATTAATTCTTCACCATGCAGT 57.539 29.630 0.00 0.00 0.00 4.40
5986 6729 9.461312 AGTATTAATTCTTCACCATGCAGTAAA 57.539 29.630 0.00 0.00 0.00 2.01
5987 6730 9.503427 GTATTAATTCTTCACCATGCAGTAAAC 57.497 33.333 0.00 0.00 0.00 2.01
5988 6731 7.517614 TTAATTCTTCACCATGCAGTAAACA 57.482 32.000 0.00 0.00 0.00 2.83
5989 6732 6.403866 AATTCTTCACCATGCAGTAAACAA 57.596 33.333 0.00 0.00 0.00 2.83
5990 6733 5.843673 TTCTTCACCATGCAGTAAACAAA 57.156 34.783 0.00 0.00 0.00 2.83
5991 6734 5.181690 TCTTCACCATGCAGTAAACAAAC 57.818 39.130 0.00 0.00 0.00 2.93
5992 6735 4.037446 TCTTCACCATGCAGTAAACAAACC 59.963 41.667 0.00 0.00 0.00 3.27
5993 6736 2.625790 TCACCATGCAGTAAACAAACCC 59.374 45.455 0.00 0.00 0.00 4.11
5994 6737 1.611491 ACCATGCAGTAAACAAACCCG 59.389 47.619 0.00 0.00 0.00 5.28
5995 6738 1.611491 CCATGCAGTAAACAAACCCGT 59.389 47.619 0.00 0.00 0.00 5.28
5996 6739 2.606795 CCATGCAGTAAACAAACCCGTG 60.607 50.000 0.00 0.00 0.00 4.94
5997 6740 1.752683 TGCAGTAAACAAACCCGTGT 58.247 45.000 0.00 0.00 0.00 4.49
5998 6741 1.671845 TGCAGTAAACAAACCCGTGTC 59.328 47.619 0.00 0.00 0.00 3.67
5999 6742 1.944709 GCAGTAAACAAACCCGTGTCT 59.055 47.619 0.00 0.00 0.00 3.41
6000 6743 2.286772 GCAGTAAACAAACCCGTGTCTG 60.287 50.000 0.00 0.00 0.00 3.51
6001 6744 2.940410 CAGTAAACAAACCCGTGTCTGT 59.060 45.455 0.00 0.00 0.00 3.41
6002 6745 4.121317 CAGTAAACAAACCCGTGTCTGTA 58.879 43.478 0.00 0.00 0.00 2.74
6003 6746 4.025480 CAGTAAACAAACCCGTGTCTGTAC 60.025 45.833 0.00 0.00 0.00 2.90
6004 6747 2.695127 AACAAACCCGTGTCTGTACA 57.305 45.000 0.00 0.00 0.00 2.90
6005 6748 2.922740 ACAAACCCGTGTCTGTACAT 57.077 45.000 0.00 0.00 38.08 2.29
6006 6749 2.489971 ACAAACCCGTGTCTGTACATG 58.510 47.619 0.00 0.00 41.51 3.21
6007 6750 2.158871 ACAAACCCGTGTCTGTACATGT 60.159 45.455 2.69 2.69 40.44 3.21
6008 6751 2.875933 CAAACCCGTGTCTGTACATGTT 59.124 45.455 2.30 0.00 40.44 2.71
6009 6752 4.059511 CAAACCCGTGTCTGTACATGTTA 58.940 43.478 2.30 0.00 40.44 2.41
6010 6753 4.339872 AACCCGTGTCTGTACATGTTAA 57.660 40.909 2.30 0.00 40.44 2.01
6011 6754 4.546829 ACCCGTGTCTGTACATGTTAAT 57.453 40.909 2.30 0.00 40.44 1.40
6012 6755 4.250464 ACCCGTGTCTGTACATGTTAATG 58.750 43.478 2.30 0.00 40.44 1.90
6120 6864 1.751924 GAGGCTCGTCAGTCCAACTAT 59.248 52.381 0.00 0.00 0.00 2.12
6247 6991 1.858458 CACACATTCCGCGAATATCGT 59.142 47.619 8.23 0.00 42.81 3.73
6287 7031 0.684479 TACTCTGACCGGAGCAGCAT 60.684 55.000 9.46 9.01 36.87 3.79
6437 7181 3.921677 ACATTGAGCTGCAAGGAAAATG 58.078 40.909 14.52 5.14 40.58 2.32
6535 7279 2.087646 GATGAACTTTGGGTCTGGCTC 58.912 52.381 0.00 0.00 0.00 4.70
6536 7280 0.843309 TGAACTTTGGGTCTGGCTCA 59.157 50.000 0.00 0.00 0.00 4.26
6538 7282 2.158475 TGAACTTTGGGTCTGGCTCAAT 60.158 45.455 0.00 0.00 37.42 2.57
6539 7283 1.915141 ACTTTGGGTCTGGCTCAATG 58.085 50.000 6.24 6.24 37.42 2.82
6540 7284 1.145738 ACTTTGGGTCTGGCTCAATGT 59.854 47.619 7.51 7.51 40.00 2.71
6541 7285 2.242043 CTTTGGGTCTGGCTCAATGTT 58.758 47.619 0.00 0.00 37.42 2.71
6542 7286 2.380064 TTGGGTCTGGCTCAATGTTT 57.620 45.000 0.00 0.00 31.50 2.83
6543 7287 2.380064 TGGGTCTGGCTCAATGTTTT 57.620 45.000 0.00 0.00 0.00 2.43
6544 7288 3.517296 TGGGTCTGGCTCAATGTTTTA 57.483 42.857 0.00 0.00 0.00 1.52
6545 7289 3.838565 TGGGTCTGGCTCAATGTTTTAA 58.161 40.909 0.00 0.00 0.00 1.52
6546 7290 4.219115 TGGGTCTGGCTCAATGTTTTAAA 58.781 39.130 0.00 0.00 0.00 1.52
6547 7291 4.837860 TGGGTCTGGCTCAATGTTTTAAAT 59.162 37.500 0.00 0.00 0.00 1.40
6548 7292 6.013379 TGGGTCTGGCTCAATGTTTTAAATA 58.987 36.000 0.00 0.00 0.00 1.40
6549 7293 6.152661 TGGGTCTGGCTCAATGTTTTAAATAG 59.847 38.462 0.00 0.00 0.00 1.73
6550 7294 6.036470 GGTCTGGCTCAATGTTTTAAATAGC 58.964 40.000 0.00 0.00 0.00 2.97
6551 7295 6.036470 GTCTGGCTCAATGTTTTAAATAGCC 58.964 40.000 0.00 0.00 46.52 3.93
6553 7297 4.359706 GGCTCAATGTTTTAAATAGCCGG 58.640 43.478 0.00 0.00 38.74 6.13
6554 7298 3.796717 GCTCAATGTTTTAAATAGCCGGC 59.203 43.478 21.89 21.89 0.00 6.13
6555 7299 4.440112 GCTCAATGTTTTAAATAGCCGGCT 60.440 41.667 34.85 34.85 0.00 5.52
6556 7300 5.220970 GCTCAATGTTTTAAATAGCCGGCTA 60.221 40.000 36.88 36.88 0.00 3.93
6557 7301 6.515035 GCTCAATGTTTTAAATAGCCGGCTAT 60.515 38.462 37.79 37.79 40.63 2.97
6558 7302 7.308348 GCTCAATGTTTTAAATAGCCGGCTATA 60.308 37.037 41.53 28.18 38.20 1.31
6559 7303 8.094798 TCAATGTTTTAAATAGCCGGCTATAG 57.905 34.615 41.53 22.50 38.20 1.31
6560 7304 5.934935 TGTTTTAAATAGCCGGCTATAGC 57.065 39.130 41.53 29.25 38.20 2.97
6561 7305 5.617252 TGTTTTAAATAGCCGGCTATAGCT 58.383 37.500 41.53 30.77 43.20 3.32
6562 7306 5.699458 TGTTTTAAATAGCCGGCTATAGCTC 59.301 40.000 41.53 28.73 40.56 4.09
6563 7307 4.467198 TTAAATAGCCGGCTATAGCTCC 57.533 45.455 41.53 12.16 40.56 4.70
6564 7308 1.938585 AATAGCCGGCTATAGCTCCA 58.061 50.000 41.53 20.91 40.56 3.86
6565 7309 1.187087 ATAGCCGGCTATAGCTCCAC 58.813 55.000 41.03 11.25 40.56 4.02
6566 7310 0.112606 TAGCCGGCTATAGCTCCACT 59.887 55.000 32.24 17.04 40.56 4.00
6567 7311 0.112606 AGCCGGCTATAGCTCCACTA 59.887 55.000 31.86 0.00 41.70 2.74
6568 7312 1.187087 GCCGGCTATAGCTCCACTAT 58.813 55.000 22.15 0.00 44.12 2.12
6569 7313 2.025226 AGCCGGCTATAGCTCCACTATA 60.025 50.000 31.86 0.00 41.91 1.31
6570 7314 2.959707 GCCGGCTATAGCTCCACTATAT 59.040 50.000 22.15 0.00 41.87 0.86
6571 7315 3.004944 GCCGGCTATAGCTCCACTATATC 59.995 52.174 22.15 2.73 41.87 1.63
6572 7316 3.570550 CCGGCTATAGCTCCACTATATCC 59.429 52.174 23.53 2.23 42.83 2.59
6573 7317 3.570550 CGGCTATAGCTCCACTATATCCC 59.429 52.174 23.53 2.03 43.12 3.85
6574 7318 3.570550 GGCTATAGCTCCACTATATCCCG 59.429 52.174 23.53 0.00 41.42 5.14
6575 7319 3.004944 GCTATAGCTCCACTATATCCCGC 59.995 52.174 17.75 0.00 41.87 6.13
6576 7320 2.901338 TAGCTCCACTATATCCCGCT 57.099 50.000 0.00 0.00 0.00 5.52
6577 7321 2.901338 AGCTCCACTATATCCCGCTA 57.099 50.000 0.00 0.00 0.00 4.26
6578 7322 3.390175 AGCTCCACTATATCCCGCTAT 57.610 47.619 0.00 0.00 0.00 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 0.704664 GGGGTTTGGAGTGAGGGATT 59.295 55.000 0.00 0.00 0.00 3.01
20 21 0.623723 GGCTATGGGGTTTGGAGTGA 59.376 55.000 0.00 0.00 0.00 3.41
94 95 2.426023 GTGGGTGGCGTCAAGACT 59.574 61.111 0.00 0.00 0.00 3.24
224 225 4.101448 GGCACGGGTCTCCTGCAT 62.101 66.667 0.00 0.00 38.25 3.96
260 261 2.267006 CTGCTGCATCAGGACGGT 59.733 61.111 9.75 0.00 31.21 4.83
280 281 0.341961 AGGGGTGGACTAGTATGCCA 59.658 55.000 0.00 0.00 0.00 4.92
367 370 2.434884 CGAGCAGATGTTGGCGGT 60.435 61.111 0.00 0.00 34.54 5.68
448 451 2.925706 TGGTGCCCGCTTGGTCTA 60.926 61.111 0.00 0.00 36.04 2.59
454 457 3.628646 GATCTGGTGGTGCCCGCTT 62.629 63.158 5.01 0.00 36.04 4.68
505 555 2.687200 ATCTACTGGGTGGCGGCA 60.687 61.111 7.97 7.97 0.00 5.69
512 562 3.537874 GCGGGCGATCTACTGGGT 61.538 66.667 0.00 0.00 0.00 4.51
545 595 4.051167 TCCTAGACGGCGGTGGGA 62.051 66.667 13.24 12.32 0.00 4.37
637 687 3.382832 CTCCCTCCTTGCCGTCGT 61.383 66.667 0.00 0.00 0.00 4.34
638 688 4.148825 CCTCCCTCCTTGCCGTCG 62.149 72.222 0.00 0.00 0.00 5.12
639 689 3.787001 CCCTCCCTCCTTGCCGTC 61.787 72.222 0.00 0.00 0.00 4.79
640 690 3.864983 TTCCCTCCCTCCTTGCCGT 62.865 63.158 0.00 0.00 0.00 5.68
641 691 3.009115 TTCCCTCCCTCCTTGCCG 61.009 66.667 0.00 0.00 0.00 5.69
642 692 2.684499 CCTTCCCTCCCTCCTTGCC 61.684 68.421 0.00 0.00 0.00 4.52
643 693 2.684499 CCCTTCCCTCCCTCCTTGC 61.684 68.421 0.00 0.00 0.00 4.01
644 694 2.003548 CCCCTTCCCTCCCTCCTTG 61.004 68.421 0.00 0.00 0.00 3.61
645 695 2.461637 CCCCTTCCCTCCCTCCTT 59.538 66.667 0.00 0.00 0.00 3.36
646 696 3.711782 CCCCCTTCCCTCCCTCCT 61.712 72.222 0.00 0.00 0.00 3.69
647 697 3.707189 TCCCCCTTCCCTCCCTCC 61.707 72.222 0.00 0.00 0.00 4.30
648 698 2.040359 CTCCCCCTTCCCTCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
649 699 3.711782 CCTCCCCCTTCCCTCCCT 61.712 72.222 0.00 0.00 0.00 4.20
650 700 4.845307 CCCTCCCCCTTCCCTCCC 62.845 77.778 0.00 0.00 0.00 4.30
651 701 4.845307 CCCCTCCCCCTTCCCTCC 62.845 77.778 0.00 0.00 0.00 4.30
652 702 4.845307 CCCCCTCCCCCTTCCCTC 62.845 77.778 0.00 0.00 0.00 4.30
654 704 4.381121 TTCCCCCTCCCCCTTCCC 62.381 72.222 0.00 0.00 0.00 3.97
655 705 2.696504 CTTCCCCCTCCCCCTTCC 60.697 72.222 0.00 0.00 0.00 3.46
656 706 2.696504 CCTTCCCCCTCCCCCTTC 60.697 72.222 0.00 0.00 0.00 3.46
657 707 3.224269 TCCTTCCCCCTCCCCCTT 61.224 66.667 0.00 0.00 0.00 3.95
658 708 3.711782 CTCCTTCCCCCTCCCCCT 61.712 72.222 0.00 0.00 0.00 4.79
659 709 4.845307 CCTCCTTCCCCCTCCCCC 62.845 77.778 0.00 0.00 0.00 5.40
661 711 4.760220 TGCCTCCTTCCCCCTCCC 62.760 72.222 0.00 0.00 0.00 4.30
662 712 2.368878 ATGCCTCCTTCCCCCTCC 60.369 66.667 0.00 0.00 0.00 4.30
663 713 2.812619 CGATGCCTCCTTCCCCCTC 61.813 68.421 0.00 0.00 0.00 4.30
664 714 2.770048 CGATGCCTCCTTCCCCCT 60.770 66.667 0.00 0.00 0.00 4.79
665 715 3.878667 CCGATGCCTCCTTCCCCC 61.879 72.222 0.00 0.00 0.00 5.40
666 716 3.878667 CCCGATGCCTCCTTCCCC 61.879 72.222 0.00 0.00 0.00 4.81
667 717 3.878667 CCCCGATGCCTCCTTCCC 61.879 72.222 0.00 0.00 0.00 3.97
668 718 3.878667 CCCCCGATGCCTCCTTCC 61.879 72.222 0.00 0.00 0.00 3.46
669 719 4.570874 GCCCCCGATGCCTCCTTC 62.571 72.222 0.00 0.00 0.00 3.46
708 758 4.813526 CCTCTCGTGACCGCGTCG 62.814 72.222 4.92 4.60 34.95 5.12
709 759 4.477975 CCCTCTCGTGACCGCGTC 62.478 72.222 4.92 3.35 0.00 5.19
711 761 4.180946 CTCCCTCTCGTGACCGCG 62.181 72.222 0.00 0.00 0.00 6.46
712 762 3.827898 CCTCCCTCTCGTGACCGC 61.828 72.222 0.00 0.00 0.00 5.68
713 763 3.141488 CCCTCCCTCTCGTGACCG 61.141 72.222 0.00 0.00 0.00 4.79
714 764 2.760385 CCCCTCCCTCTCGTGACC 60.760 72.222 0.00 0.00 0.00 4.02
715 765 2.760385 CCCCCTCCCTCTCGTGAC 60.760 72.222 0.00 0.00 0.00 3.67
716 766 4.779733 GCCCCCTCCCTCTCGTGA 62.780 72.222 0.00 0.00 0.00 4.35
718 768 4.095400 ATGCCCCCTCCCTCTCGT 62.095 66.667 0.00 0.00 0.00 4.18
719 769 3.237741 GATGCCCCCTCCCTCTCG 61.238 72.222 0.00 0.00 0.00 4.04
720 770 3.237741 CGATGCCCCCTCCCTCTC 61.238 72.222 0.00 0.00 0.00 3.20
721 771 4.888325 CCGATGCCCCCTCCCTCT 62.888 72.222 0.00 0.00 0.00 3.69
722 772 4.880426 TCCGATGCCCCCTCCCTC 62.880 72.222 0.00 0.00 0.00 4.30
725 775 2.284515 AATTGTCCGATGCCCCCTCC 62.285 60.000 0.00 0.00 0.00 4.30
726 776 0.395724 AAATTGTCCGATGCCCCCTC 60.396 55.000 0.00 0.00 0.00 4.30
727 777 0.041090 AAAATTGTCCGATGCCCCCT 59.959 50.000 0.00 0.00 0.00 4.79
728 778 0.175531 CAAAATTGTCCGATGCCCCC 59.824 55.000 0.00 0.00 0.00 5.40
729 779 1.181786 TCAAAATTGTCCGATGCCCC 58.818 50.000 0.00 0.00 0.00 5.80
730 780 2.606108 GTTCAAAATTGTCCGATGCCC 58.394 47.619 0.00 0.00 0.00 5.36
731 781 2.606108 GGTTCAAAATTGTCCGATGCC 58.394 47.619 0.00 0.00 0.00 4.40
732 782 2.606108 GGGTTCAAAATTGTCCGATGC 58.394 47.619 0.00 0.00 0.00 3.91
733 783 2.825532 AGGGGTTCAAAATTGTCCGATG 59.174 45.455 0.00 0.00 0.00 3.84
734 784 3.169512 AGGGGTTCAAAATTGTCCGAT 57.830 42.857 0.00 0.00 0.00 4.18
735 785 2.668144 AGGGGTTCAAAATTGTCCGA 57.332 45.000 0.00 0.00 0.00 4.55
736 786 2.163613 GCTAGGGGTTCAAAATTGTCCG 59.836 50.000 0.00 0.00 0.00 4.79
737 787 3.431415 AGCTAGGGGTTCAAAATTGTCC 58.569 45.455 0.00 0.00 0.00 4.02
738 788 4.079253 TGAGCTAGGGGTTCAAAATTGTC 58.921 43.478 0.00 0.00 32.34 3.18
739 789 4.112634 TGAGCTAGGGGTTCAAAATTGT 57.887 40.909 0.00 0.00 32.34 2.71
740 790 4.952335 AGATGAGCTAGGGGTTCAAAATTG 59.048 41.667 0.00 0.00 38.58 2.32
741 791 5.198602 AGATGAGCTAGGGGTTCAAAATT 57.801 39.130 0.00 0.00 38.58 1.82
742 792 4.870021 AGATGAGCTAGGGGTTCAAAAT 57.130 40.909 0.00 0.00 38.58 1.82
743 793 5.772393 TTAGATGAGCTAGGGGTTCAAAA 57.228 39.130 0.00 0.00 38.58 2.44
744 794 5.191722 ACATTAGATGAGCTAGGGGTTCAAA 59.808 40.000 0.00 0.00 38.58 2.69
745 795 4.721776 ACATTAGATGAGCTAGGGGTTCAA 59.278 41.667 0.00 0.00 38.58 2.69
746 796 4.101585 CACATTAGATGAGCTAGGGGTTCA 59.898 45.833 0.00 0.00 39.38 3.18
747 797 4.101741 ACACATTAGATGAGCTAGGGGTTC 59.898 45.833 0.00 0.00 0.00 3.62
748 798 4.040755 ACACATTAGATGAGCTAGGGGTT 58.959 43.478 0.00 0.00 0.00 4.11
749 799 3.643792 GACACATTAGATGAGCTAGGGGT 59.356 47.826 0.00 0.00 0.00 4.95
750 800 3.007398 GGACACATTAGATGAGCTAGGGG 59.993 52.174 0.00 0.00 0.00 4.79
751 801 3.643320 TGGACACATTAGATGAGCTAGGG 59.357 47.826 0.00 0.00 0.00 3.53
752 802 4.944619 TGGACACATTAGATGAGCTAGG 57.055 45.455 0.00 0.00 0.00 3.02
753 803 6.757237 AGAATGGACACATTAGATGAGCTAG 58.243 40.000 0.00 0.00 46.89 3.42
754 804 6.737720 AGAATGGACACATTAGATGAGCTA 57.262 37.500 0.00 0.00 46.89 3.32
755 805 5.627182 AGAATGGACACATTAGATGAGCT 57.373 39.130 0.00 0.00 46.89 4.09
756 806 5.931146 CCTAGAATGGACACATTAGATGAGC 59.069 44.000 0.00 0.00 46.89 4.26
757 807 6.268617 TCCCTAGAATGGACACATTAGATGAG 59.731 42.308 0.00 0.00 46.89 2.90
758 808 6.143206 TCCCTAGAATGGACACATTAGATGA 58.857 40.000 0.00 0.00 46.89 2.92
759 809 6.425210 TCCCTAGAATGGACACATTAGATG 57.575 41.667 0.00 0.00 46.89 2.90
760 810 8.180165 TCTATCCCTAGAATGGACACATTAGAT 58.820 37.037 0.00 0.00 46.89 1.98
761 811 7.451877 GTCTATCCCTAGAATGGACACATTAGA 59.548 40.741 13.22 4.28 46.89 2.10
762 812 7.575909 CGTCTATCCCTAGAATGGACACATTAG 60.576 44.444 16.31 4.57 46.89 1.73
763 813 6.208797 CGTCTATCCCTAGAATGGACACATTA 59.791 42.308 16.31 0.00 46.89 1.90
765 815 4.524714 CGTCTATCCCTAGAATGGACACAT 59.475 45.833 16.31 0.00 35.76 3.21
766 816 3.889538 CGTCTATCCCTAGAATGGACACA 59.110 47.826 16.31 0.00 35.76 3.72
767 817 3.256136 CCGTCTATCCCTAGAATGGACAC 59.744 52.174 16.31 3.67 35.76 3.67
768 818 3.497332 CCGTCTATCCCTAGAATGGACA 58.503 50.000 16.31 0.00 35.76 4.02
769 819 2.826725 CCCGTCTATCCCTAGAATGGAC 59.173 54.545 9.90 9.90 35.76 4.02
770 820 2.449730 ACCCGTCTATCCCTAGAATGGA 59.550 50.000 0.00 0.00 35.76 3.41
771 821 2.826725 GACCCGTCTATCCCTAGAATGG 59.173 54.545 0.00 0.00 35.76 3.16
772 822 2.826725 GGACCCGTCTATCCCTAGAATG 59.173 54.545 0.00 0.00 35.76 2.67
773 823 2.554785 CGGACCCGTCTATCCCTAGAAT 60.555 54.545 0.00 0.00 35.76 2.40
774 824 1.202855 CGGACCCGTCTATCCCTAGAA 60.203 57.143 0.00 0.00 35.76 2.10
775 825 0.399454 CGGACCCGTCTATCCCTAGA 59.601 60.000 0.00 0.00 34.35 2.43
776 826 0.608582 CCGGACCCGTCTATCCCTAG 60.609 65.000 0.00 0.00 37.81 3.02
777 827 1.355718 ACCGGACCCGTCTATCCCTA 61.356 60.000 9.46 0.00 37.81 3.53
778 828 1.355718 TACCGGACCCGTCTATCCCT 61.356 60.000 9.46 0.00 37.81 4.20
779 829 1.151450 TACCGGACCCGTCTATCCC 59.849 63.158 9.46 0.00 37.81 3.85
780 830 0.179006 AGTACCGGACCCGTCTATCC 60.179 60.000 9.46 0.00 37.81 2.59
781 831 0.950116 CAGTACCGGACCCGTCTATC 59.050 60.000 9.46 0.00 37.81 2.08
782 832 0.466922 CCAGTACCGGACCCGTCTAT 60.467 60.000 9.46 0.00 37.81 1.98
783 833 1.077501 CCAGTACCGGACCCGTCTA 60.078 63.158 9.46 0.00 37.81 2.59
784 834 2.362120 CCAGTACCGGACCCGTCT 60.362 66.667 9.46 0.63 37.81 4.18
785 835 2.278330 AACCAGTACCGGACCCGTC 61.278 63.158 9.46 0.00 37.81 4.79
786 836 2.203684 AACCAGTACCGGACCCGT 60.204 61.111 9.46 0.00 37.81 5.28
787 837 1.610554 ATCAACCAGTACCGGACCCG 61.611 60.000 9.46 0.66 39.44 5.28
788 838 0.616891 AATCAACCAGTACCGGACCC 59.383 55.000 9.46 0.00 0.00 4.46
789 839 1.553704 AGAATCAACCAGTACCGGACC 59.446 52.381 9.46 0.00 0.00 4.46
790 840 2.028385 ACAGAATCAACCAGTACCGGAC 60.028 50.000 9.46 1.42 0.00 4.79
791 841 2.253610 ACAGAATCAACCAGTACCGGA 58.746 47.619 9.46 0.00 0.00 5.14
792 842 2.762535 ACAGAATCAACCAGTACCGG 57.237 50.000 0.00 0.00 0.00 5.28
793 843 3.435671 GGAAACAGAATCAACCAGTACCG 59.564 47.826 0.00 0.00 0.00 4.02
794 844 4.652822 AGGAAACAGAATCAACCAGTACC 58.347 43.478 0.00 0.00 0.00 3.34
795 845 6.128254 GCTAAGGAAACAGAATCAACCAGTAC 60.128 42.308 0.00 0.00 0.00 2.73
796 846 5.938125 GCTAAGGAAACAGAATCAACCAGTA 59.062 40.000 0.00 0.00 0.00 2.74
797 847 4.762251 GCTAAGGAAACAGAATCAACCAGT 59.238 41.667 0.00 0.00 0.00 4.00
798 848 5.006386 AGCTAAGGAAACAGAATCAACCAG 58.994 41.667 0.00 0.00 0.00 4.00
799 849 4.985538 AGCTAAGGAAACAGAATCAACCA 58.014 39.130 0.00 0.00 0.00 3.67
800 850 5.966742 AAGCTAAGGAAACAGAATCAACC 57.033 39.130 0.00 0.00 0.00 3.77
801 851 9.914131 AAATAAAGCTAAGGAAACAGAATCAAC 57.086 29.630 0.00 0.00 0.00 3.18
805 855 8.687242 GCCTAAATAAAGCTAAGGAAACAGAAT 58.313 33.333 0.00 0.00 0.00 2.40
806 856 7.148306 CGCCTAAATAAAGCTAAGGAAACAGAA 60.148 37.037 0.00 0.00 0.00 3.02
807 857 6.315393 CGCCTAAATAAAGCTAAGGAAACAGA 59.685 38.462 0.00 0.00 0.00 3.41
808 858 6.487103 CGCCTAAATAAAGCTAAGGAAACAG 58.513 40.000 0.00 0.00 0.00 3.16
809 859 5.163693 GCGCCTAAATAAAGCTAAGGAAACA 60.164 40.000 0.00 0.00 0.00 2.83
810 860 5.163693 TGCGCCTAAATAAAGCTAAGGAAAC 60.164 40.000 4.18 0.00 0.00 2.78
811 861 4.944930 TGCGCCTAAATAAAGCTAAGGAAA 59.055 37.500 4.18 0.00 0.00 3.13
818 868 1.933853 CGTCTGCGCCTAAATAAAGCT 59.066 47.619 4.18 0.00 0.00 3.74
886 936 2.813754 GCCAGCACATAGTGTCTTTCAA 59.186 45.455 0.00 0.00 35.75 2.69
888 938 1.740025 GGCCAGCACATAGTGTCTTTC 59.260 52.381 0.00 0.00 35.75 2.62
943 993 3.262420 GACAGCACACAATAGTAGGTGG 58.738 50.000 8.96 1.35 39.31 4.61
975 1025 5.059161 TGAACTTGTCATTGTCAAGGAGAG 58.941 41.667 21.96 4.81 44.29 3.20
976 1026 5.034852 TGAACTTGTCATTGTCAAGGAGA 57.965 39.130 21.96 0.00 44.29 3.71
985 1035 5.231357 GCATGTGCATATGAACTTGTCATTG 59.769 40.000 25.71 9.20 41.74 2.82
1007 1057 4.852134 ATCTTGCTATGTGTTGTTTGCA 57.148 36.364 0.00 0.00 0.00 4.08
1038 1088 1.265365 CACACACACACACACACACAA 59.735 47.619 0.00 0.00 0.00 3.33
1079 1129 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1080 1130 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1081 1131 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1082 1132 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1083 1133 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1084 1134 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1085 1135 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1086 1136 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1087 1137 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1088 1138 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1089 1139 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1090 1140 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1091 1141 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1092 1142 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1093 1143 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1094 1144 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1095 1145 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1096 1146 5.782047 CATCTCTCTCTCTCTCTCTCTCTC 58.218 50.000 0.00 0.00 0.00 3.20
1097 1147 4.040217 GCATCTCTCTCTCTCTCTCTCTCT 59.960 50.000 0.00 0.00 0.00 3.10
1098 1148 4.202295 TGCATCTCTCTCTCTCTCTCTCTC 60.202 50.000 0.00 0.00 0.00 3.20
1099 1149 3.713248 TGCATCTCTCTCTCTCTCTCTCT 59.287 47.826 0.00 0.00 0.00 3.10
1100 1150 4.063689 CTGCATCTCTCTCTCTCTCTCTC 58.936 52.174 0.00 0.00 0.00 3.20
1101 1151 3.181447 CCTGCATCTCTCTCTCTCTCTCT 60.181 52.174 0.00 0.00 0.00 3.10
1102 1152 3.144506 CCTGCATCTCTCTCTCTCTCTC 58.855 54.545 0.00 0.00 0.00 3.20
1103 1153 2.511218 ACCTGCATCTCTCTCTCTCTCT 59.489 50.000 0.00 0.00 0.00 3.10
1104 1154 2.620115 CACCTGCATCTCTCTCTCTCTC 59.380 54.545 0.00 0.00 0.00 3.20
1290 1340 1.589113 GAGCTTGACCTGCTCGTCT 59.411 57.895 0.00 0.00 45.73 4.18
1398 1448 1.089112 TGAGCTTGTTGCCATCATCG 58.911 50.000 0.00 0.00 44.23 3.84
1419 1469 2.478831 GCCATCTTCTCCACGAGATTC 58.521 52.381 0.00 0.00 38.56 2.52
1443 1493 3.018149 AGCCTTACCGTTGTTGAACAAA 58.982 40.909 12.89 0.00 40.15 2.83
1620 1839 1.506493 CATAGATGCCGACAAGCTCC 58.494 55.000 0.00 0.00 0.00 4.70
1691 1910 7.233389 ACTATCTTTAGTCTCTTCTTGCACA 57.767 36.000 0.00 0.00 33.18 4.57
1901 2120 5.066375 TCGATAAGTTGCCTTTCATCCAATG 59.934 40.000 0.00 0.00 31.89 2.82
2020 2269 8.594550 AGATTCTAAGCTTTCTACCAGTTAACA 58.405 33.333 3.20 0.00 0.00 2.41
2059 2311 4.500603 ACGGCTATAAATGAGTAGGACG 57.499 45.455 0.00 0.00 0.00 4.79
2084 2336 2.100252 CCGCCTCTGCATCAAAATGATT 59.900 45.455 0.00 0.00 34.28 2.57
2092 2344 3.993865 TACCCCCGCCTCTGCATCA 62.994 63.158 0.00 0.00 37.32 3.07
2093 2345 2.056906 ATTACCCCCGCCTCTGCATC 62.057 60.000 0.00 0.00 37.32 3.91
2101 2353 1.642513 AAAGGAGGATTACCCCCGCC 61.643 60.000 0.00 0.00 43.02 6.13
2104 2356 3.750501 TTTGAAAGGAGGATTACCCCC 57.249 47.619 0.00 0.00 36.73 5.40
2127 2379 0.769247 AACGAGTAGGGCAGGGTTTT 59.231 50.000 0.00 0.00 0.00 2.43
2128 2380 0.769247 AAACGAGTAGGGCAGGGTTT 59.231 50.000 0.00 0.00 0.00 3.27
2129 2381 0.036306 CAAACGAGTAGGGCAGGGTT 59.964 55.000 0.00 0.00 0.00 4.11
2130 2382 1.125711 ACAAACGAGTAGGGCAGGGT 61.126 55.000 0.00 0.00 0.00 4.34
2132 2384 2.167693 TGATACAAACGAGTAGGGCAGG 59.832 50.000 0.00 0.00 0.00 4.85
2133 2385 3.520290 TGATACAAACGAGTAGGGCAG 57.480 47.619 0.00 0.00 0.00 4.85
2134 2386 4.439057 GAATGATACAAACGAGTAGGGCA 58.561 43.478 0.00 0.00 0.00 5.36
2135 2387 3.808174 GGAATGATACAAACGAGTAGGGC 59.192 47.826 0.00 0.00 0.00 5.19
2136 2388 4.141801 TGGGAATGATACAAACGAGTAGGG 60.142 45.833 0.00 0.00 0.00 3.53
2137 2389 5.018539 TGGGAATGATACAAACGAGTAGG 57.981 43.478 0.00 0.00 0.00 3.18
2138 2390 6.978343 TTTGGGAATGATACAAACGAGTAG 57.022 37.500 0.00 0.00 0.00 2.57
2139 2391 7.608376 TCAATTTGGGAATGATACAAACGAGTA 59.392 33.333 0.00 0.00 36.98 2.59
2140 2392 6.432783 TCAATTTGGGAATGATACAAACGAGT 59.567 34.615 0.00 0.00 36.98 4.18
2210 2462 9.769677 ACCTCTACATGGCTTCTACATATATAA 57.230 33.333 0.00 0.00 0.00 0.98
2213 2465 8.168058 TGTACCTCTACATGGCTTCTACATATA 58.832 37.037 0.00 0.00 0.00 0.86
2225 2868 9.838339 AATTCTAGAAATTGTACCTCTACATGG 57.162 33.333 9.71 0.00 32.70 3.66
2299 2945 6.576662 TCTCGATAATCTCTCCGCTTTAAT 57.423 37.500 0.00 0.00 0.00 1.40
2313 2959 6.155910 ACCAGCCATGAATAGATCTCGATAAT 59.844 38.462 0.00 0.00 0.00 1.28
2326 2972 8.766994 AACAAATATACTAACCAGCCATGAAT 57.233 30.769 0.00 0.00 0.00 2.57
2565 3218 9.816354 TTCAGACGATATGATCTTCAACATAAA 57.184 29.630 0.00 0.00 33.63 1.40
2629 3282 8.361139 TCGGTTCCACAAAATGTACAAAAATAT 58.639 29.630 0.00 0.00 0.00 1.28
2633 3286 5.125739 ACTCGGTTCCACAAAATGTACAAAA 59.874 36.000 0.00 0.00 0.00 2.44
2634 3287 4.641094 ACTCGGTTCCACAAAATGTACAAA 59.359 37.500 0.00 0.00 0.00 2.83
2635 3288 4.200874 ACTCGGTTCCACAAAATGTACAA 58.799 39.130 0.00 0.00 0.00 2.41
2636 3289 3.811083 ACTCGGTTCCACAAAATGTACA 58.189 40.909 0.00 0.00 0.00 2.90
2637 3290 4.273969 TCAACTCGGTTCCACAAAATGTAC 59.726 41.667 0.00 0.00 0.00 2.90
2638 3291 4.452825 TCAACTCGGTTCCACAAAATGTA 58.547 39.130 0.00 0.00 0.00 2.29
2639 3292 3.283751 TCAACTCGGTTCCACAAAATGT 58.716 40.909 0.00 0.00 0.00 2.71
2640 3293 3.980646 TCAACTCGGTTCCACAAAATG 57.019 42.857 0.00 0.00 0.00 2.32
2641 3294 4.795962 GCAATCAACTCGGTTCCACAAAAT 60.796 41.667 0.00 0.00 0.00 1.82
2653 3306 4.033358 GGTGAAGTCATAGCAATCAACTCG 59.967 45.833 0.00 0.00 0.00 4.18
2657 3310 4.641541 CCATGGTGAAGTCATAGCAATCAA 59.358 41.667 2.57 0.00 0.00 2.57
2665 3318 1.408683 GCTGCCCATGGTGAAGTCATA 60.409 52.381 11.73 0.00 0.00 2.15
2715 3368 3.181478 GCTTACTACGAGCAATAGGTGGT 60.181 47.826 0.00 0.00 41.89 4.16
2745 3398 5.567430 ACGGTAATTTTTCTAGAGCCCTTT 58.433 37.500 0.00 0.00 0.00 3.11
2746 3399 5.175388 ACGGTAATTTTTCTAGAGCCCTT 57.825 39.130 0.00 0.00 0.00 3.95
2769 3422 1.048601 AGACCTACCATGGTATGCCG 58.951 55.000 24.78 12.92 41.00 5.69
2771 3424 2.158755 AGCAAGACCTACCATGGTATGC 60.159 50.000 28.50 28.50 45.55 3.14
2785 3438 3.063588 GGCGTAACTAATCCAAGCAAGAC 59.936 47.826 0.00 0.00 0.00 3.01
2805 3458 0.678048 AAGCCCTGTTTCGATCTGGC 60.678 55.000 11.29 11.29 0.00 4.85
2813 3466 1.882623 CAGAGACCAAAGCCCTGTTTC 59.117 52.381 0.00 0.00 0.00 2.78
2826 3479 3.628032 TCAGTGATACGATGACAGAGACC 59.372 47.826 0.00 0.00 0.00 3.85
2844 3497 5.293569 GGTAAAATGCGTAATGCTAGTCAGT 59.706 40.000 0.00 0.00 46.63 3.41
2863 3516 4.347096 CGTCTGCCACGTGGTAAA 57.653 55.556 33.92 16.42 44.07 2.01
2871 3524 0.032952 TCAGTAACCACGTCTGCCAC 59.967 55.000 0.00 0.00 0.00 5.01
2922 3575 6.888632 ACAATCTGGAGCTTGTCAATAAAGAT 59.111 34.615 0.00 0.00 29.43 2.40
3052 3706 4.857871 CATGTAACGACCCATGTAGTTG 57.142 45.455 0.00 0.00 40.06 3.16
3062 3717 2.288961 ATGGACGACATGTAACGACC 57.711 50.000 17.36 17.36 42.44 4.79
3082 3738 3.560068 CCTGGATGTGTAAATAACGAGGC 59.440 47.826 0.00 0.00 0.00 4.70
3083 3739 5.018539 TCCTGGATGTGTAAATAACGAGG 57.981 43.478 0.00 0.00 0.00 4.63
3087 3743 6.920569 ATCGTTCCTGGATGTGTAAATAAC 57.079 37.500 0.00 0.00 0.00 1.89
3100 3756 9.398170 CAAGCAAATAATAATAATCGTTCCTGG 57.602 33.333 0.00 0.00 0.00 4.45
3102 3758 9.349713 TCCAAGCAAATAATAATAATCGTTCCT 57.650 29.630 0.00 0.00 0.00 3.36
3103 3759 9.394477 GTCCAAGCAAATAATAATAATCGTTCC 57.606 33.333 0.00 0.00 0.00 3.62
3161 3820 8.924511 ACCCGTCAATAATCTATTCAATGATT 57.075 30.769 0.00 0.00 36.87 2.57
3192 3851 3.463944 AGAAAACAAGTGGACACCGTAG 58.536 45.455 0.00 0.00 0.00 3.51
3195 3854 2.032924 GGAAGAAAACAAGTGGACACCG 59.967 50.000 0.00 0.00 0.00 4.94
3299 3970 7.523293 AGATATCTGTATCAGTTGTGAGAGG 57.477 40.000 3.89 0.00 39.36 3.69
3349 4020 7.451731 ACTTGATATCTCCCCATAGTTTTGA 57.548 36.000 3.98 0.00 0.00 2.69
3450 4121 3.054875 TGGAATCATGAGTGGAAGGACAG 60.055 47.826 0.00 0.00 0.00 3.51
3647 4318 8.954950 TTCAAATTTTGGCTTTATCTGTTGAA 57.045 26.923 9.18 0.00 0.00 2.69
3813 4484 2.347697 TGTCAATCTCACGGTCTTCG 57.652 50.000 0.00 0.00 45.88 3.79
4085 4757 1.338973 TCCTACGGATATTGCCACGAC 59.661 52.381 0.00 0.00 0.00 4.34
4136 4808 6.431234 ACTTGAATTAATGAGAGGTGTGGTTC 59.569 38.462 0.00 0.00 0.00 3.62
4160 4832 6.770746 TGGACCTTACTTGAGACATACTAC 57.229 41.667 0.00 0.00 0.00 2.73
4161 4833 7.973048 AATGGACCTTACTTGAGACATACTA 57.027 36.000 0.00 0.00 0.00 1.82
4205 4877 3.443329 AGATAGAGCAGGCATGATAGTCG 59.557 47.826 0.62 0.00 0.00 4.18
4272 4944 4.141344 TTAACTTGACAGTTAACTGCCCCT 60.141 41.667 30.97 14.93 46.32 4.79
4534 5212 3.859443 CAGAGATCCTCTCCAACACTTG 58.141 50.000 0.60 0.00 44.42 3.16
4553 5231 0.809385 CACAATGCTTGGAGAGGCAG 59.191 55.000 0.00 0.00 41.88 4.85
4700 5381 4.164221 CCAAGTATGGTGAATCCTGGTAGT 59.836 45.833 0.00 0.00 42.18 2.73
4762 5455 6.071952 TGGTCTGAATAGAACTCAAATTTGCC 60.072 38.462 13.54 4.31 41.40 4.52
4778 5471 1.108776 GCATGCCATGTGGTCTGAAT 58.891 50.000 6.36 0.00 37.57 2.57
4820 5513 2.300967 TGTGAGGGGCCACATCTCC 61.301 63.158 8.31 0.00 41.63 3.71
4857 5550 7.172190 CGCACTTCCTTGATTATGATACTGAAT 59.828 37.037 0.00 0.00 0.00 2.57
5034 5730 3.326836 GCTCCTTGCTGAAAGACTACT 57.673 47.619 0.00 0.00 38.24 2.57
5198 5894 2.167900 GCTTTCTCGGCCTCCTTAACTA 59.832 50.000 0.00 0.00 0.00 2.24
5312 6018 2.036475 AGGTCCATGATGAGTATCGCAC 59.964 50.000 0.00 0.00 38.61 5.34
5313 6019 2.036346 CAGGTCCATGATGAGTATCGCA 59.964 50.000 0.00 0.00 38.61 5.10
5377 6120 6.032956 AGATTGAGATGCAAAATTGAGCAA 57.967 33.333 8.86 0.00 44.88 3.91
5407 6150 6.039717 TCGTCATCATCATCATCAGTGTCTAA 59.960 38.462 0.00 0.00 0.00 2.10
5424 6167 7.023575 CGTCATCATAATAGTCATCGTCATCA 58.976 38.462 0.00 0.00 0.00 3.07
5454 6197 6.285224 TCTTTTTCCTTGAACGTCAGTATCA 58.715 36.000 0.00 0.00 0.00 2.15
5495 6238 7.803189 GTCAAGAATGAAATGAAAGAAAGCGTA 59.197 33.333 0.00 0.00 37.30 4.42
5496 6239 6.638468 GTCAAGAATGAAATGAAAGAAAGCGT 59.362 34.615 0.00 0.00 37.30 5.07
5512 6255 3.434641 ACGAAGCATGAGTGTCAAGAATG 59.565 43.478 0.00 0.00 0.00 2.67
5523 6266 4.191544 TGGGATCTAAAACGAAGCATGAG 58.808 43.478 0.00 0.00 0.00 2.90
5614 6357 3.041946 ACCTGGAGCCTGACCTTTATAG 58.958 50.000 0.00 0.00 0.00 1.31
5714 6457 8.421673 ACCTCTAAATTAAAGCGATACTGAAC 57.578 34.615 0.00 0.00 0.00 3.18
5726 6469 8.232913 ACAAGCAGTGAAACCTCTAAATTAAA 57.767 30.769 0.00 0.00 37.80 1.52
5727 6470 7.817418 ACAAGCAGTGAAACCTCTAAATTAA 57.183 32.000 0.00 0.00 37.80 1.40
5778 6521 7.862873 AGTTAAAACTAGAGCAAGCAAATGAAC 59.137 33.333 0.00 0.00 37.52 3.18
5813 6556 4.755411 ACGGAAGTTCATTACATGACGAT 58.245 39.130 5.01 0.00 46.40 3.73
5960 6703 9.461312 TTTACTGCATGGTGAAGAATTAATACT 57.539 29.630 0.00 0.00 0.00 2.12
5961 6704 9.503427 GTTTACTGCATGGTGAAGAATTAATAC 57.497 33.333 0.00 0.00 0.00 1.89
5962 6705 9.237187 TGTTTACTGCATGGTGAAGAATTAATA 57.763 29.630 0.00 0.00 0.00 0.98
5963 6706 8.121305 TGTTTACTGCATGGTGAAGAATTAAT 57.879 30.769 0.00 0.00 0.00 1.40
5964 6707 7.517614 TGTTTACTGCATGGTGAAGAATTAA 57.482 32.000 0.00 0.00 0.00 1.40
5965 6708 7.517614 TTGTTTACTGCATGGTGAAGAATTA 57.482 32.000 0.00 0.00 0.00 1.40
5966 6709 6.403866 TTGTTTACTGCATGGTGAAGAATT 57.596 33.333 0.00 0.00 0.00 2.17
5967 6710 6.215845 GTTTGTTTACTGCATGGTGAAGAAT 58.784 36.000 0.00 0.00 0.00 2.40
5968 6711 5.451242 GGTTTGTTTACTGCATGGTGAAGAA 60.451 40.000 0.00 0.00 0.00 2.52
5969 6712 4.037446 GGTTTGTTTACTGCATGGTGAAGA 59.963 41.667 0.00 0.00 0.00 2.87
5970 6713 4.298332 GGTTTGTTTACTGCATGGTGAAG 58.702 43.478 0.00 0.00 0.00 3.02
5971 6714 3.068873 GGGTTTGTTTACTGCATGGTGAA 59.931 43.478 0.00 0.00 0.00 3.18
5972 6715 2.625790 GGGTTTGTTTACTGCATGGTGA 59.374 45.455 0.00 0.00 0.00 4.02
5973 6716 2.606795 CGGGTTTGTTTACTGCATGGTG 60.607 50.000 0.00 0.00 0.00 4.17
5974 6717 1.611491 CGGGTTTGTTTACTGCATGGT 59.389 47.619 0.00 0.00 0.00 3.55
5975 6718 1.611491 ACGGGTTTGTTTACTGCATGG 59.389 47.619 0.00 0.00 0.00 3.66
5976 6719 2.034053 ACACGGGTTTGTTTACTGCATG 59.966 45.455 0.00 0.00 0.00 4.06
5977 6720 2.292292 GACACGGGTTTGTTTACTGCAT 59.708 45.455 0.00 0.00 0.00 3.96
5978 6721 1.671845 GACACGGGTTTGTTTACTGCA 59.328 47.619 0.00 0.00 0.00 4.41
5979 6722 1.944709 AGACACGGGTTTGTTTACTGC 59.055 47.619 0.00 0.00 0.00 4.40
5980 6723 2.940410 ACAGACACGGGTTTGTTTACTG 59.060 45.455 8.40 3.40 39.10 2.74
5981 6724 3.271055 ACAGACACGGGTTTGTTTACT 57.729 42.857 8.40 0.00 39.10 2.24
5982 6725 3.870419 TGTACAGACACGGGTTTGTTTAC 59.130 43.478 19.99 12.88 39.10 2.01
5983 6726 4.134379 TGTACAGACACGGGTTTGTTTA 57.866 40.909 19.99 6.29 39.10 2.01
5984 6727 2.988570 TGTACAGACACGGGTTTGTTT 58.011 42.857 19.99 0.00 39.10 2.83
5985 6728 2.695127 TGTACAGACACGGGTTTGTT 57.305 45.000 19.99 4.09 39.10 2.83
5986 6729 2.158871 ACATGTACAGACACGGGTTTGT 60.159 45.455 18.77 18.77 43.88 2.83
5987 6730 2.489971 ACATGTACAGACACGGGTTTG 58.510 47.619 6.82 6.82 38.76 2.93
5988 6731 2.922740 ACATGTACAGACACGGGTTT 57.077 45.000 0.00 0.00 38.76 3.27
5989 6732 2.922740 AACATGTACAGACACGGGTT 57.077 45.000 0.00 0.00 38.76 4.11
5990 6733 4.250464 CATTAACATGTACAGACACGGGT 58.750 43.478 0.00 0.00 38.76 5.28
5991 6734 3.063452 GCATTAACATGTACAGACACGGG 59.937 47.826 0.00 0.00 38.76 5.28
5992 6735 3.932710 AGCATTAACATGTACAGACACGG 59.067 43.478 0.00 0.00 38.76 4.94
5993 6736 5.530519 AAGCATTAACATGTACAGACACG 57.469 39.130 0.00 0.00 38.76 4.49
6287 7031 3.119602 CCGACTCTCTAACGGTGATCAAA 60.120 47.826 0.00 0.00 41.47 2.69
6437 7181 5.698545 AGCAATTATTAGAGATGAACGAGGC 59.301 40.000 0.00 0.00 0.00 4.70
6535 7279 6.801862 GCTATAGCCGGCTATTTAAAACATTG 59.198 38.462 44.65 25.37 39.65 2.82
6536 7280 6.715264 AGCTATAGCCGGCTATTTAAAACATT 59.285 34.615 44.65 25.26 43.38 2.71
6538 7282 5.617252 AGCTATAGCCGGCTATTTAAAACA 58.383 37.500 44.65 27.89 43.38 2.83
6539 7283 5.121925 GGAGCTATAGCCGGCTATTTAAAAC 59.878 44.000 44.65 30.15 43.38 2.43
6540 7284 5.221762 TGGAGCTATAGCCGGCTATTTAAAA 60.222 40.000 44.65 29.19 43.38 1.52
6541 7285 4.285003 TGGAGCTATAGCCGGCTATTTAAA 59.715 41.667 44.65 29.52 43.38 1.52
6542 7286 3.835978 TGGAGCTATAGCCGGCTATTTAA 59.164 43.478 44.65 29.85 43.38 1.52
6543 7287 3.194968 GTGGAGCTATAGCCGGCTATTTA 59.805 47.826 44.65 30.51 43.38 1.40
6544 7288 2.028020 GTGGAGCTATAGCCGGCTATTT 60.028 50.000 44.65 31.93 43.38 1.40
6545 7289 1.550976 GTGGAGCTATAGCCGGCTATT 59.449 52.381 44.65 31.45 43.38 1.73
6546 7290 1.187087 GTGGAGCTATAGCCGGCTAT 58.813 55.000 42.09 42.09 43.38 2.97
6547 7291 0.112606 AGTGGAGCTATAGCCGGCTA 59.887 55.000 36.88 36.88 43.38 3.93
6548 7292 0.112606 TAGTGGAGCTATAGCCGGCT 59.887 55.000 34.85 34.85 43.38 5.52
6549 7293 1.187087 ATAGTGGAGCTATAGCCGGC 58.813 55.000 21.89 21.89 43.38 6.13
6550 7294 4.839668 GATATAGTGGAGCTATAGCCGG 57.160 50.000 21.17 0.00 43.57 6.13
6553 7297 3.004944 GCGGGATATAGTGGAGCTATAGC 59.995 52.174 17.33 17.33 43.57 2.97
6554 7298 4.465886 AGCGGGATATAGTGGAGCTATAG 58.534 47.826 0.00 0.00 43.57 1.31
6555 7299 4.521536 AGCGGGATATAGTGGAGCTATA 57.478 45.455 0.00 0.00 44.21 1.31
6556 7300 3.390175 AGCGGGATATAGTGGAGCTAT 57.610 47.619 0.00 0.00 42.63 2.97
6557 7301 2.901338 AGCGGGATATAGTGGAGCTA 57.099 50.000 0.00 0.00 0.00 3.32
6558 7302 2.901338 TAGCGGGATATAGTGGAGCT 57.099 50.000 0.00 0.00 37.27 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.