Multiple sequence alignment - TraesCS5D01G363400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G363400 chr5D 100.000 2880 0 0 1 2880 441261303 441258424 0.000000e+00 5319.0
1 TraesCS5D01G363400 chr5D 75.570 745 142 28 527 1243 440797977 440798709 5.950000e-87 331.0
2 TraesCS5D01G363400 chr5D 76.263 594 112 19 570 1140 441125160 441124573 3.630000e-74 289.0
3 TraesCS5D01G363400 chr5D 74.303 646 126 27 533 1157 440893097 440893723 1.330000e-58 237.0
4 TraesCS5D01G363400 chr5D 77.749 382 75 5 555 930 441112702 441112325 2.890000e-55 226.0
5 TraesCS5D01G363400 chr5D 73.733 651 124 33 533 1157 440916364 440916993 8.080000e-51 211.0
6 TraesCS5D01G363400 chr5D 75.802 405 87 11 123 521 440893035 440893434 8.140000e-46 195.0
7 TraesCS5D01G363400 chr5D 76.000 375 77 10 123 489 440916302 440916671 6.340000e-42 182.0
8 TraesCS5D01G363400 chr5B 88.790 2248 167 37 191 2429 537307872 537305701 0.000000e+00 2676.0
9 TraesCS5D01G363400 chr5B 91.720 1244 94 4 1 1239 536928199 536926960 0.000000e+00 1718.0
10 TraesCS5D01G363400 chr5B 84.801 1204 127 29 1241 2429 536926873 536925711 0.000000e+00 1158.0
11 TraesCS5D01G363400 chr5B 84.192 291 42 3 527 814 536928020 536927731 2.190000e-71 279.0
12 TraesCS5D01G363400 chr5B 75.397 630 121 18 570 1175 536800480 536799861 1.020000e-69 274.0
13 TraesCS5D01G363400 chr5B 83.860 285 43 3 186 470 536927666 536927385 4.730000e-68 268.0
14 TraesCS5D01G363400 chr5B 74.534 644 131 21 533 1157 536320838 536321467 1.710000e-62 250.0
15 TraesCS5D01G363400 chr5B 77.723 404 80 10 123 521 536320776 536321174 3.710000e-59 239.0
16 TraesCS5D01G363400 chr5B 80.498 241 30 6 2448 2672 536925727 536925488 4.940000e-38 169.0
17 TraesCS5D01G363400 chr5B 94.898 98 5 0 1 98 537308012 537307915 1.380000e-33 154.0
18 TraesCS5D01G363400 chr5B 79.253 241 33 8 2448 2672 537305717 537305478 4.970000e-33 152.0
19 TraesCS5D01G363400 chr5B 92.982 57 4 0 7 63 536320687 536320743 1.840000e-12 84.2
20 TraesCS5D01G363400 chr2D 99.231 130 1 0 1 130 520537337 520537208 4.800000e-58 235.0
21 TraesCS5D01G363400 chr1B 75.281 534 105 21 1 527 39397498 39396985 2.230000e-56 230.0
22 TraesCS5D01G363400 chr5A 80.080 251 41 8 995 1243 556820614 556820371 8.200000e-41 178.0
23 TraesCS5D01G363400 chr5A 73.855 524 99 21 7 520 556821287 556820792 1.060000e-39 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G363400 chr5D 441258424 441261303 2879 True 5319.0 5319 100.0000 1 2880 1 chr5D.!!$R3 2879
1 TraesCS5D01G363400 chr5D 440797977 440798709 732 False 331.0 331 75.5700 527 1243 1 chr5D.!!$F1 716
2 TraesCS5D01G363400 chr5D 441124573 441125160 587 True 289.0 289 76.2630 570 1140 1 chr5D.!!$R2 570
3 TraesCS5D01G363400 chr5D 440893035 440893723 688 False 216.0 237 75.0525 123 1157 2 chr5D.!!$F2 1034
4 TraesCS5D01G363400 chr5B 537305478 537308012 2534 True 994.0 2676 87.6470 1 2672 3 chr5B.!!$R3 2671
5 TraesCS5D01G363400 chr5B 536925488 536928199 2711 True 718.4 1718 85.0142 1 2672 5 chr5B.!!$R2 2671
6 TraesCS5D01G363400 chr5B 536799861 536800480 619 True 274.0 274 75.3970 570 1175 1 chr5B.!!$R1 605
7 TraesCS5D01G363400 chr1B 39396985 39397498 513 True 230.0 230 75.2810 1 527 1 chr1B.!!$R1 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
884 894 0.321919 ACAGTGCTGGGCTATGTGTG 60.322 55.0 4.11 0.0 34.19 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1936 2112 0.039326 AAGCAGCAAGGGATCAGCTT 59.961 50.0 0.0 0.0 36.26 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.279527 CGAACGCTACGCCAAGTTCA 61.280 55.000 12.57 0.00 42.01 3.18
344 346 3.842923 CCTCCGCGGACTCAGCAT 61.843 66.667 27.28 0.00 33.16 3.79
402 404 2.188817 GTCTCTGTATGTTCCCACCCT 58.811 52.381 0.00 0.00 0.00 4.34
469 471 2.492012 GCCTTGAGCGATTGATCTCAT 58.508 47.619 0.00 0.00 38.90 2.90
470 472 2.223611 GCCTTGAGCGATTGATCTCATG 59.776 50.000 0.00 0.00 38.90 3.07
478 480 2.549563 CGATTGATCTCATGGGGTCCAG 60.550 54.545 2.64 0.00 36.75 3.86
479 481 1.971149 TTGATCTCATGGGGTCCAGT 58.029 50.000 2.64 0.00 36.75 4.00
481 483 1.561076 TGATCTCATGGGGTCCAGTTG 59.439 52.381 2.64 0.00 36.75 3.16
527 529 4.223964 GGCGCCGAAATCTCACGC 62.224 66.667 12.58 0.00 42.88 5.34
617 619 1.313812 GGTGTCGTCATCTCGGAGGT 61.314 60.000 4.96 0.00 0.00 3.85
755 760 5.366768 TCTCTGTATATTCCCACTCCAAAGG 59.633 44.000 0.00 0.00 0.00 3.11
820 827 9.245962 GCCTTGAGAGATTGATTTCATTTAATG 57.754 33.333 0.00 0.00 0.00 1.90
867 877 0.394938 TTGGAGCGCCTAAACTGACA 59.605 50.000 8.34 0.00 34.31 3.58
884 894 0.321919 ACAGTGCTGGGCTATGTGTG 60.322 55.000 4.11 0.00 34.19 3.82
1059 1118 5.070313 AGTGAAGATCTTGGCTCTAGAATCC 59.930 44.000 14.00 0.00 0.00 3.01
1107 1166 6.480763 TGTTGGATTACTTAGATGCTTTCCA 58.519 36.000 0.00 0.00 0.00 3.53
1247 1391 6.291648 TGATCAATCATATACCTCTCTGGC 57.708 41.667 0.00 0.00 40.22 4.85
1254 1398 2.478872 ATACCTCTCTGGCTGCCTAA 57.521 50.000 21.03 6.82 40.22 2.69
1261 1405 1.211457 CTCTGGCTGCCTAACTTGGAT 59.789 52.381 21.03 0.00 0.00 3.41
1320 1464 7.982354 ACAATCAAGTTTTATTCGTTTCCCAAA 59.018 29.630 0.00 0.00 0.00 3.28
1326 1470 9.819267 AAGTTTTATTCGTTTCCCAAATTTACA 57.181 25.926 0.00 0.00 0.00 2.41
1331 1475 7.883229 ATTCGTTTCCCAAATTTACATTGAC 57.117 32.000 0.00 0.00 0.00 3.18
1371 1515 5.467735 AGTTGCATCTTGGAAATTTTGAAGC 59.532 36.000 0.00 0.00 26.96 3.86
1402 1551 2.635427 GGAGCCTTCTAGGGGACTATTG 59.365 54.545 6.82 0.00 43.39 1.90
1455 1604 6.057533 TGCAAGTCATCCTGATGTTAATAGG 58.942 40.000 7.00 0.00 39.72 2.57
1457 1606 6.203723 GCAAGTCATCCTGATGTTAATAGGTC 59.796 42.308 7.00 0.00 39.72 3.85
1459 1608 5.905331 AGTCATCCTGATGTTAATAGGTCCA 59.095 40.000 7.00 0.00 39.72 4.02
1460 1609 6.560304 AGTCATCCTGATGTTAATAGGTCCAT 59.440 38.462 7.00 0.00 39.72 3.41
1461 1610 6.876257 GTCATCCTGATGTTAATAGGTCCATC 59.124 42.308 7.00 0.00 39.72 3.51
1462 1611 6.789457 TCATCCTGATGTTAATAGGTCCATCT 59.211 38.462 7.00 0.00 39.72 2.90
1463 1612 7.955750 TCATCCTGATGTTAATAGGTCCATCTA 59.044 37.037 7.00 0.00 39.72 1.98
1464 1613 8.766476 CATCCTGATGTTAATAGGTCCATCTAT 58.234 37.037 0.00 0.00 35.76 1.98
1465 1614 8.138928 TCCTGATGTTAATAGGTCCATCTATG 57.861 38.462 0.00 0.00 35.76 2.23
1466 1615 7.955750 TCCTGATGTTAATAGGTCCATCTATGA 59.044 37.037 0.00 0.00 35.76 2.15
1467 1616 8.597167 CCTGATGTTAATAGGTCCATCTATGAA 58.403 37.037 0.00 0.00 35.76 2.57
1468 1617 9.650539 CTGATGTTAATAGGTCCATCTATGAAG 57.349 37.037 0.00 0.00 35.76 3.02
1469 1618 9.379770 TGATGTTAATAGGTCCATCTATGAAGA 57.620 33.333 0.00 0.00 35.76 2.87
1472 1621 9.213777 TGTTAATAGGTCCATCTATGAAGAAGT 57.786 33.333 0.00 0.00 34.73 3.01
1544 1719 5.443185 TTCTCTTCTTTTGCAGTCATTGG 57.557 39.130 0.00 0.00 0.00 3.16
1573 1748 5.587388 AGGATATGAAAAATGTGTGGCAG 57.413 39.130 0.00 0.00 0.00 4.85
1582 1757 6.096564 TGAAAAATGTGTGGCAGCATGATATA 59.903 34.615 0.00 0.00 39.69 0.86
1608 1783 4.380761 CGATCCAATTGAATGCCTTGTTCA 60.381 41.667 7.12 0.00 34.01 3.18
1710 1885 1.293062 AGGGTGCTCAAGGTGATGAT 58.707 50.000 0.00 0.00 0.00 2.45
1889 2065 7.152645 TCCCTTTGATAGCTAAATATGTCGAC 58.847 38.462 9.11 9.11 0.00 4.20
1898 2074 4.084328 GCTAAATATGTCGACCATGCTCAC 60.084 45.833 14.12 0.00 34.86 3.51
1909 2085 3.989838 ATGCTCACGGCTGCTGCAT 62.990 57.895 17.89 12.75 42.39 3.96
1911 2087 2.435410 CTCACGGCTGCTGCATGA 60.435 61.111 17.89 17.43 41.91 3.07
1913 2089 2.435410 CACGGCTGCTGCATGAGA 60.435 61.111 17.89 0.00 41.91 3.27
1920 2096 1.804601 CTGCTGCATGAGACTGTGAA 58.195 50.000 1.31 0.00 0.00 3.18
1936 2112 2.703536 TGTGAACTTCCTCAAGGCAGTA 59.296 45.455 1.65 0.00 40.78 2.74
1950 2126 1.020437 GCAGTAAGCTGATCCCTTGC 58.980 55.000 6.10 5.02 45.28 4.01
1979 2155 5.048294 TCGTTTATTTTCTTCTCTTTGGGGC 60.048 40.000 0.00 0.00 0.00 5.80
2003 2179 2.106166 GAGTGAGGAGGGCATCATTGAT 59.894 50.000 0.08 0.00 37.15 2.57
2010 2186 3.005155 GGAGGGCATCATTGATTGTAAGC 59.995 47.826 0.08 0.00 0.00 3.09
2013 2189 3.378339 GGCATCATTGATTGTAAGCTGC 58.622 45.455 0.00 0.00 0.00 5.25
2015 2191 3.067742 GCATCATTGATTGTAAGCTGCCT 59.932 43.478 0.00 0.00 0.00 4.75
2020 2196 6.158598 TCATTGATTGTAAGCTGCCTTTTTC 58.841 36.000 0.00 0.00 32.47 2.29
2040 2216 8.801715 TTTTTCATTTCTCTTATGTTCTGTGC 57.198 30.769 0.00 0.00 0.00 4.57
2042 2218 4.631377 TCATTTCTCTTATGTTCTGTGCGG 59.369 41.667 0.00 0.00 0.00 5.69
2046 2222 3.067106 CTCTTATGTTCTGTGCGGTTGT 58.933 45.455 0.00 0.00 0.00 3.32
2047 2223 3.472652 TCTTATGTTCTGTGCGGTTGTT 58.527 40.909 0.00 0.00 0.00 2.83
2048 2224 3.249799 TCTTATGTTCTGTGCGGTTGTTG 59.750 43.478 0.00 0.00 0.00 3.33
2049 2225 1.388547 ATGTTCTGTGCGGTTGTTGT 58.611 45.000 0.00 0.00 0.00 3.32
2050 2226 0.449786 TGTTCTGTGCGGTTGTTGTG 59.550 50.000 0.00 0.00 0.00 3.33
2051 2227 0.450184 GTTCTGTGCGGTTGTTGTGT 59.550 50.000 0.00 0.00 0.00 3.72
2052 2228 1.135517 GTTCTGTGCGGTTGTTGTGTT 60.136 47.619 0.00 0.00 0.00 3.32
2053 2229 1.169577 TCTGTGCGGTTGTTGTGTTT 58.830 45.000 0.00 0.00 0.00 2.83
2054 2230 1.542030 TCTGTGCGGTTGTTGTGTTTT 59.458 42.857 0.00 0.00 0.00 2.43
2055 2231 1.653114 CTGTGCGGTTGTTGTGTTTTG 59.347 47.619 0.00 0.00 0.00 2.44
2081 2261 3.455619 CGTAAGGTGTTCATTCAGCAC 57.544 47.619 0.00 0.00 38.15 4.40
2093 2273 3.771479 TCATTCAGCACACCTCTGTATCT 59.229 43.478 0.00 0.00 33.48 1.98
2105 2285 5.122869 CACCTCTGTATCTTGTGACCATTTG 59.877 44.000 0.00 0.00 0.00 2.32
2119 2301 2.587307 ACCATTTGGGGCCTTCTAAGAT 59.413 45.455 0.84 0.00 42.91 2.40
2137 2319 8.948631 TCTAAGATGTAATGCCTTTTGTCTAG 57.051 34.615 0.00 0.00 0.00 2.43
2138 2320 8.758829 TCTAAGATGTAATGCCTTTTGTCTAGA 58.241 33.333 0.00 0.00 0.00 2.43
2147 2329 8.962884 AATGCCTTTTGTCTAGAAAAATGTTT 57.037 26.923 8.93 3.24 0.00 2.83
2162 2344 8.550376 AGAAAAATGTTTTTGATCGGTTTGATG 58.450 29.630 8.09 0.00 40.21 3.07
2164 2346 4.313277 TGTTTTTGATCGGTTTGATGCA 57.687 36.364 0.00 0.00 37.47 3.96
2217 2399 5.938322 TCGTTCCAAACATTCTAAGCATTC 58.062 37.500 0.00 0.00 0.00 2.67
2252 2434 8.417884 CAACCTTTTGTTCTTATGGAAACCTTA 58.582 33.333 0.00 0.00 34.00 2.69
2263 2445 2.028748 TGGAAACCTTAGTGCTACCGTC 60.029 50.000 0.00 0.00 0.00 4.79
2275 2457 3.562973 GTGCTACCGTCTACTGTATGCTA 59.437 47.826 0.00 0.00 0.00 3.49
2280 2462 3.181489 ACCGTCTACTGTATGCTAACTGC 60.181 47.826 0.00 0.00 43.25 4.40
2281 2463 3.066900 CCGTCTACTGTATGCTAACTGCT 59.933 47.826 0.00 0.00 43.37 4.24
2290 2472 6.934645 ACTGTATGCTAACTGCTAACTGAAAA 59.065 34.615 0.00 0.00 43.37 2.29
2291 2473 7.095187 ACTGTATGCTAACTGCTAACTGAAAAC 60.095 37.037 0.00 0.00 43.37 2.43
2292 2474 5.629079 ATGCTAACTGCTAACTGAAAACC 57.371 39.130 0.00 0.00 43.37 3.27
2293 2475 4.714632 TGCTAACTGCTAACTGAAAACCT 58.285 39.130 0.00 0.00 43.37 3.50
2294 2476 5.130350 TGCTAACTGCTAACTGAAAACCTT 58.870 37.500 0.00 0.00 43.37 3.50
2296 2478 4.918810 AACTGCTAACTGAAAACCTTGG 57.081 40.909 0.00 0.00 0.00 3.61
2298 2480 3.632145 ACTGCTAACTGAAAACCTTGGTG 59.368 43.478 0.00 0.00 0.00 4.17
2299 2481 2.360801 TGCTAACTGAAAACCTTGGTGC 59.639 45.455 0.00 0.00 0.00 5.01
2300 2482 2.360801 GCTAACTGAAAACCTTGGTGCA 59.639 45.455 0.00 0.00 0.00 4.57
2301 2483 3.181480 GCTAACTGAAAACCTTGGTGCAA 60.181 43.478 0.00 0.00 0.00 4.08
2302 2484 2.959507 ACTGAAAACCTTGGTGCAAC 57.040 45.000 0.00 0.00 0.00 4.17
2324 2508 1.634702 TTTGCAAGTTGCCACGTTTC 58.365 45.000 24.59 0.00 44.23 2.78
2347 2531 0.543749 AGCATACTTGAGGTGGAGGC 59.456 55.000 0.00 0.00 0.00 4.70
2353 2537 1.002087 ACTTGAGGTGGAGGCGTAAAG 59.998 52.381 0.00 0.00 0.00 1.85
2379 2563 0.811281 CAGACAAATTTCCCGGAGCC 59.189 55.000 0.73 0.00 0.00 4.70
2420 2604 5.362430 ACAGAAGAGGGAGCTTAACTATCAG 59.638 44.000 0.00 0.00 0.00 2.90
2421 2605 4.343814 AGAAGAGGGAGCTTAACTATCAGC 59.656 45.833 0.00 0.00 36.16 4.26
2422 2606 2.969262 AGAGGGAGCTTAACTATCAGCC 59.031 50.000 0.00 0.00 36.62 4.85
2423 2607 2.700897 GAGGGAGCTTAACTATCAGCCA 59.299 50.000 0.00 0.00 36.62 4.75
2424 2608 2.703007 AGGGAGCTTAACTATCAGCCAG 59.297 50.000 0.00 0.00 36.62 4.85
2425 2609 2.700897 GGGAGCTTAACTATCAGCCAGA 59.299 50.000 0.00 0.00 36.62 3.86
2426 2610 3.134804 GGGAGCTTAACTATCAGCCAGAA 59.865 47.826 0.00 0.00 36.62 3.02
2427 2611 4.384208 GGGAGCTTAACTATCAGCCAGAAA 60.384 45.833 0.00 0.00 36.62 2.52
2428 2612 5.372373 GGAGCTTAACTATCAGCCAGAAAT 58.628 41.667 0.00 0.00 36.62 2.17
2429 2613 5.825151 GGAGCTTAACTATCAGCCAGAAATT 59.175 40.000 0.00 0.00 36.62 1.82
2430 2614 6.017523 GGAGCTTAACTATCAGCCAGAAATTC 60.018 42.308 0.00 0.00 36.62 2.17
2431 2615 5.825151 AGCTTAACTATCAGCCAGAAATTCC 59.175 40.000 0.00 0.00 36.62 3.01
2432 2616 5.009110 GCTTAACTATCAGCCAGAAATTCCC 59.991 44.000 0.00 0.00 0.00 3.97
2433 2617 3.584733 ACTATCAGCCAGAAATTCCCC 57.415 47.619 0.00 0.00 0.00 4.81
2434 2618 3.126453 ACTATCAGCCAGAAATTCCCCT 58.874 45.455 0.00 0.00 0.00 4.79
2435 2619 2.744352 ATCAGCCAGAAATTCCCCTC 57.256 50.000 0.00 0.00 0.00 4.30
2436 2620 1.371467 TCAGCCAGAAATTCCCCTCA 58.629 50.000 0.00 0.00 0.00 3.86
2437 2621 1.710244 TCAGCCAGAAATTCCCCTCAA 59.290 47.619 0.00 0.00 0.00 3.02
2438 2622 2.109834 TCAGCCAGAAATTCCCCTCAAA 59.890 45.455 0.00 0.00 0.00 2.69
2439 2623 2.899256 CAGCCAGAAATTCCCCTCAAAA 59.101 45.455 0.00 0.00 0.00 2.44
2440 2624 3.324556 CAGCCAGAAATTCCCCTCAAAAA 59.675 43.478 0.00 0.00 0.00 1.94
2474 2658 5.235305 TGAGCGAGAAATAATTTCAAGCC 57.765 39.130 0.00 0.00 41.77 4.35
2481 2665 6.534475 AGAAATAATTTCAAGCCAGCATGA 57.466 33.333 0.00 0.00 42.10 3.07
2483 2667 7.562135 AGAAATAATTTCAAGCCAGCATGAAT 58.438 30.769 10.71 0.86 42.10 2.57
2489 2673 3.888583 TCAAGCCAGCATGAATATGTGA 58.111 40.909 0.00 0.00 39.69 3.58
2511 2695 7.801315 TGTGAATCTAAAATAAGTTTGTCGTGC 59.199 33.333 0.00 0.00 0.00 5.34
2512 2696 7.801315 GTGAATCTAAAATAAGTTTGTCGTGCA 59.199 33.333 0.00 0.00 0.00 4.57
2523 2707 2.967459 TGTCGTGCAAAATGCTACTG 57.033 45.000 3.78 0.00 45.31 2.74
2524 2708 2.217750 TGTCGTGCAAAATGCTACTGT 58.782 42.857 3.78 0.00 45.31 3.55
2525 2709 2.616376 TGTCGTGCAAAATGCTACTGTT 59.384 40.909 3.78 0.00 45.31 3.16
2526 2710 3.226347 GTCGTGCAAAATGCTACTGTTC 58.774 45.455 3.78 0.00 45.31 3.18
2527 2711 2.225491 TCGTGCAAAATGCTACTGTTCC 59.775 45.455 3.78 0.00 45.31 3.62
2572 2764 7.538678 CAGAACAAATAGTACATTTGGTGAAGC 59.461 37.037 22.99 12.33 38.86 3.86
2574 2766 7.524717 ACAAATAGTACATTTGGTGAAGCTT 57.475 32.000 22.99 0.00 41.80 3.74
2584 2776 6.040842 ACATTTGGTGAAGCTTTATTGTGTCT 59.959 34.615 0.00 0.00 0.00 3.41
2585 2777 5.437289 TTGGTGAAGCTTTATTGTGTCTG 57.563 39.130 0.00 0.00 0.00 3.51
2586 2778 4.460263 TGGTGAAGCTTTATTGTGTCTGT 58.540 39.130 0.00 0.00 0.00 3.41
2588 2780 4.515191 GGTGAAGCTTTATTGTGTCTGTGA 59.485 41.667 0.00 0.00 0.00 3.58
2596 2796 0.526739 TTGTGTCTGTGACGTGTCCG 60.527 55.000 0.00 0.00 34.95 4.79
2598 2798 1.824760 TGTCTGTGACGTGTCCGGA 60.825 57.895 0.00 0.00 38.78 5.14
2607 2807 1.679977 CGTGTCCGGACTCCCCTAA 60.680 63.158 33.39 10.38 0.00 2.69
2612 2812 0.117742 TCCGGACTCCCCTAAACCTT 59.882 55.000 0.00 0.00 0.00 3.50
2618 2818 3.635531 GGACTCCCCTAAACCTTCCCTAT 60.636 52.174 0.00 0.00 0.00 2.57
2630 2830 2.752903 CCTTCCCTATGTTTGGTTTCGG 59.247 50.000 0.00 0.00 0.00 4.30
2633 2833 3.834938 TCCCTATGTTTGGTTTCGGTTT 58.165 40.909 0.00 0.00 0.00 3.27
2639 2839 0.824759 TTTGGTTTCGGTTTGTGGGG 59.175 50.000 0.00 0.00 0.00 4.96
2672 2872 4.473643 CCTTCAACAAGGGCACGA 57.526 55.556 0.00 0.00 45.27 4.35
2673 2873 1.949257 CCTTCAACAAGGGCACGAC 59.051 57.895 0.00 0.00 45.27 4.34
2674 2874 0.535102 CCTTCAACAAGGGCACGACT 60.535 55.000 0.00 0.00 45.27 4.18
2675 2875 0.868406 CTTCAACAAGGGCACGACTC 59.132 55.000 0.00 0.00 0.00 3.36
2676 2876 0.878523 TTCAACAAGGGCACGACTCG 60.879 55.000 0.00 0.00 0.00 4.18
2677 2877 1.594293 CAACAAGGGCACGACTCGT 60.594 57.895 0.00 0.00 42.36 4.18
2687 2887 2.517598 ACGACTCGTGCATGTCAAC 58.482 52.632 2.53 0.00 39.18 3.18
2688 2888 0.249280 ACGACTCGTGCATGTCAACA 60.249 50.000 2.53 0.00 39.18 3.33
2689 2889 1.070821 CGACTCGTGCATGTCAACAT 58.929 50.000 5.68 0.00 36.96 2.71
2690 2890 1.460743 CGACTCGTGCATGTCAACATT 59.539 47.619 5.68 0.00 33.61 2.71
2691 2891 2.722706 CGACTCGTGCATGTCAACATTG 60.723 50.000 5.68 0.00 33.61 2.82
2692 2892 2.221169 ACTCGTGCATGTCAACATTGT 58.779 42.857 5.68 0.00 33.61 2.71
2693 2893 2.224079 ACTCGTGCATGTCAACATTGTC 59.776 45.455 5.68 0.00 33.61 3.18
2694 2894 1.535028 TCGTGCATGTCAACATTGTCC 59.465 47.619 5.68 0.00 33.61 4.02
2695 2895 1.401409 CGTGCATGTCAACATTGTCCC 60.401 52.381 0.00 0.00 33.61 4.46
2696 2896 0.880441 TGCATGTCAACATTGTCCCG 59.120 50.000 0.00 0.00 33.61 5.14
2697 2897 0.881118 GCATGTCAACATTGTCCCGT 59.119 50.000 0.00 0.00 33.61 5.28
2698 2898 1.135689 GCATGTCAACATTGTCCCGTC 60.136 52.381 0.00 0.00 33.61 4.79
2699 2899 2.150390 CATGTCAACATTGTCCCGTCA 58.850 47.619 0.00 0.00 33.61 4.35
2700 2900 2.333688 TGTCAACATTGTCCCGTCAA 57.666 45.000 0.00 0.00 0.00 3.18
2701 2901 2.217750 TGTCAACATTGTCCCGTCAAG 58.782 47.619 0.00 0.00 0.00 3.02
2702 2902 1.069227 GTCAACATTGTCCCGTCAAGC 60.069 52.381 0.00 0.00 0.00 4.01
2703 2903 1.202758 TCAACATTGTCCCGTCAAGCT 60.203 47.619 0.00 0.00 0.00 3.74
2704 2904 2.037902 TCAACATTGTCCCGTCAAGCTA 59.962 45.455 0.00 0.00 0.00 3.32
2705 2905 2.386661 ACATTGTCCCGTCAAGCTAG 57.613 50.000 0.00 0.00 0.00 3.42
2706 2906 1.899814 ACATTGTCCCGTCAAGCTAGA 59.100 47.619 0.00 0.00 0.00 2.43
2707 2907 2.093973 ACATTGTCCCGTCAAGCTAGAG 60.094 50.000 0.00 0.00 0.00 2.43
2708 2908 1.919240 TTGTCCCGTCAAGCTAGAGA 58.081 50.000 0.00 0.00 0.00 3.10
2709 2909 1.464734 TGTCCCGTCAAGCTAGAGAG 58.535 55.000 0.00 0.00 0.00 3.20
2710 2910 0.741915 GTCCCGTCAAGCTAGAGAGG 59.258 60.000 0.00 0.00 0.00 3.69
2711 2911 1.038130 TCCCGTCAAGCTAGAGAGGC 61.038 60.000 0.00 0.00 0.00 4.70
2712 2912 1.064946 CCGTCAAGCTAGAGAGGCG 59.935 63.158 0.00 0.00 34.52 5.52
2713 2913 1.377366 CCGTCAAGCTAGAGAGGCGA 61.377 60.000 0.00 0.00 34.52 5.54
2714 2914 0.665835 CGTCAAGCTAGAGAGGCGAT 59.334 55.000 0.00 0.00 34.52 4.58
2715 2915 1.599171 CGTCAAGCTAGAGAGGCGATG 60.599 57.143 0.00 0.00 34.52 3.84
2716 2916 1.678627 GTCAAGCTAGAGAGGCGATGA 59.321 52.381 0.00 0.00 34.52 2.92
2717 2917 1.678627 TCAAGCTAGAGAGGCGATGAC 59.321 52.381 0.00 0.00 34.52 3.06
2718 2918 0.665835 AAGCTAGAGAGGCGATGACG 59.334 55.000 0.00 0.00 42.93 4.35
2719 2919 0.179043 AGCTAGAGAGGCGATGACGA 60.179 55.000 0.00 0.00 42.66 4.20
2720 2920 0.663688 GCTAGAGAGGCGATGACGAA 59.336 55.000 0.00 0.00 42.66 3.85
2721 2921 1.598430 GCTAGAGAGGCGATGACGAAC 60.598 57.143 0.00 0.00 42.66 3.95
2722 2922 0.656259 TAGAGAGGCGATGACGAACG 59.344 55.000 0.00 0.00 42.66 3.95
2723 2923 1.025113 AGAGAGGCGATGACGAACGA 61.025 55.000 0.14 0.00 42.66 3.85
2724 2924 0.862283 GAGAGGCGATGACGAACGAC 60.862 60.000 0.14 0.00 42.66 4.34
2725 2925 1.154093 GAGGCGATGACGAACGACA 60.154 57.895 0.14 1.16 40.24 4.35
2726 2926 1.403972 GAGGCGATGACGAACGACAC 61.404 60.000 0.14 0.00 40.24 3.67
2727 2927 2.442188 GGCGATGACGAACGACACC 61.442 63.158 0.14 0.00 42.66 4.16
2728 2928 1.731613 GCGATGACGAACGACACCA 60.732 57.895 0.14 0.00 42.66 4.17
2729 2929 1.076533 GCGATGACGAACGACACCAT 61.077 55.000 0.14 0.00 42.66 3.55
2730 2930 1.346365 CGATGACGAACGACACCATT 58.654 50.000 0.14 0.00 42.66 3.16
2731 2931 1.059122 CGATGACGAACGACACCATTG 59.941 52.381 0.14 0.32 42.66 2.82
2732 2932 0.796312 ATGACGAACGACACCATTGC 59.204 50.000 0.14 0.00 0.00 3.56
2733 2933 0.530870 TGACGAACGACACCATTGCA 60.531 50.000 0.14 0.00 0.00 4.08
2734 2934 0.796312 GACGAACGACACCATTGCAT 59.204 50.000 0.14 0.00 0.00 3.96
2735 2935 1.196808 GACGAACGACACCATTGCATT 59.803 47.619 0.14 0.00 0.00 3.56
2736 2936 2.413796 GACGAACGACACCATTGCATTA 59.586 45.455 0.14 0.00 0.00 1.90
2737 2937 2.158841 ACGAACGACACCATTGCATTAC 59.841 45.455 0.14 0.00 0.00 1.89
2738 2938 2.415168 CGAACGACACCATTGCATTACT 59.585 45.455 0.00 0.00 0.00 2.24
2739 2939 3.483574 CGAACGACACCATTGCATTACTC 60.484 47.826 0.00 0.00 0.00 2.59
2740 2940 2.356135 ACGACACCATTGCATTACTCC 58.644 47.619 0.00 0.00 0.00 3.85
2741 2941 2.290008 ACGACACCATTGCATTACTCCA 60.290 45.455 0.00 0.00 0.00 3.86
2742 2942 2.095853 CGACACCATTGCATTACTCCAC 59.904 50.000 0.00 0.00 0.00 4.02
2743 2943 2.083774 ACACCATTGCATTACTCCACG 58.916 47.619 0.00 0.00 0.00 4.94
2744 2944 1.401552 CACCATTGCATTACTCCACGG 59.598 52.381 0.00 0.00 0.00 4.94
2745 2945 1.280710 ACCATTGCATTACTCCACGGA 59.719 47.619 0.00 0.00 0.00 4.69
2746 2946 1.942657 CCATTGCATTACTCCACGGAG 59.057 52.381 11.67 11.67 46.91 4.63
2747 2947 2.419990 CCATTGCATTACTCCACGGAGA 60.420 50.000 19.98 0.00 44.53 3.71
2748 2948 2.672961 TTGCATTACTCCACGGAGAG 57.327 50.000 19.98 7.50 44.53 3.20
2749 2949 1.847328 TGCATTACTCCACGGAGAGA 58.153 50.000 19.98 7.73 44.53 3.10
2750 2950 2.388735 TGCATTACTCCACGGAGAGAT 58.611 47.619 19.98 9.61 44.53 2.75
2751 2951 2.766263 TGCATTACTCCACGGAGAGATT 59.234 45.455 19.98 0.00 44.53 2.40
2752 2952 3.197766 TGCATTACTCCACGGAGAGATTT 59.802 43.478 19.98 0.00 44.53 2.17
2753 2953 3.557595 GCATTACTCCACGGAGAGATTTG 59.442 47.826 19.98 10.05 44.53 2.32
2754 2954 3.887621 TTACTCCACGGAGAGATTTGG 57.112 47.619 19.98 0.00 44.53 3.28
2755 2955 1.938585 ACTCCACGGAGAGATTTGGA 58.061 50.000 19.98 0.00 44.53 3.53
2756 2956 1.550976 ACTCCACGGAGAGATTTGGAC 59.449 52.381 19.98 0.00 44.53 4.02
2757 2957 0.902531 TCCACGGAGAGATTTGGACC 59.097 55.000 0.00 0.00 33.02 4.46
2758 2958 0.107654 CCACGGAGAGATTTGGACCC 60.108 60.000 0.00 0.00 0.00 4.46
2759 2959 0.460284 CACGGAGAGATTTGGACCCG 60.460 60.000 0.00 0.00 42.30 5.28
2760 2960 1.521681 CGGAGAGATTTGGACCCGC 60.522 63.158 0.00 0.00 0.00 6.13
2761 2961 1.153147 GGAGAGATTTGGACCCGCC 60.153 63.158 0.00 0.00 37.10 6.13
2769 2969 3.628989 TGGACCCGCCACTCATAG 58.371 61.111 0.00 0.00 43.33 2.23
2770 2970 2.063979 TGGACCCGCCACTCATAGG 61.064 63.158 0.00 0.00 43.33 2.57
2771 2971 1.760875 GGACCCGCCACTCATAGGA 60.761 63.158 0.00 0.00 36.34 2.94
2772 2972 1.442148 GACCCGCCACTCATAGGAC 59.558 63.158 0.00 0.00 0.00 3.85
2773 2973 2.029307 GACCCGCCACTCATAGGACC 62.029 65.000 0.00 0.00 0.00 4.46
2774 2974 2.063979 CCCGCCACTCATAGGACCA 61.064 63.158 0.00 0.00 0.00 4.02
2775 2975 1.410850 CCCGCCACTCATAGGACCAT 61.411 60.000 0.00 0.00 0.00 3.55
2776 2976 1.338107 CCGCCACTCATAGGACCATA 58.662 55.000 0.00 0.00 0.00 2.74
2777 2977 1.902508 CCGCCACTCATAGGACCATAT 59.097 52.381 0.00 0.00 0.00 1.78
2778 2978 3.096852 CCGCCACTCATAGGACCATATA 58.903 50.000 0.00 0.00 0.00 0.86
2779 2979 3.706594 CCGCCACTCATAGGACCATATAT 59.293 47.826 0.00 0.00 0.00 0.86
2780 2980 4.893524 CCGCCACTCATAGGACCATATATA 59.106 45.833 0.00 0.00 0.00 0.86
2781 2981 5.540337 CCGCCACTCATAGGACCATATATAT 59.460 44.000 0.00 0.00 0.00 0.86
2782 2982 6.719829 CCGCCACTCATAGGACCATATATATA 59.280 42.308 0.00 0.00 0.00 0.86
2783 2983 7.397476 CCGCCACTCATAGGACCATATATATAT 59.603 40.741 0.00 0.00 0.00 0.86
2784 2984 9.462606 CGCCACTCATAGGACCATATATATATA 57.537 37.037 4.90 4.92 0.00 0.86
2801 3001 9.880157 TATATATATATATGACGCTACTGGCGA 57.120 33.333 20.93 0.00 45.56 5.54
2808 3008 2.579201 GCTACTGGCGAGCTTGGA 59.421 61.111 2.37 0.00 36.96 3.53
2809 3009 1.144936 GCTACTGGCGAGCTTGGAT 59.855 57.895 2.37 0.00 36.96 3.41
2810 3010 0.878086 GCTACTGGCGAGCTTGGATC 60.878 60.000 2.37 0.00 36.96 3.36
2811 3011 0.249657 CTACTGGCGAGCTTGGATCC 60.250 60.000 4.20 4.20 0.00 3.36
2812 3012 0.975556 TACTGGCGAGCTTGGATCCA 60.976 55.000 11.44 11.44 0.00 3.41
2813 3013 1.147824 CTGGCGAGCTTGGATCCAT 59.852 57.895 17.06 0.00 0.00 3.41
2814 3014 1.153107 TGGCGAGCTTGGATCCATG 60.153 57.895 17.06 19.20 0.00 3.66
2815 3015 1.146930 GGCGAGCTTGGATCCATGA 59.853 57.895 27.35 8.81 0.00 3.07
2816 3016 0.464373 GGCGAGCTTGGATCCATGAA 60.464 55.000 27.35 8.08 0.00 2.57
2817 3017 0.942962 GCGAGCTTGGATCCATGAAG 59.057 55.000 27.35 17.87 0.00 3.02
2818 3018 1.745141 GCGAGCTTGGATCCATGAAGT 60.745 52.381 27.35 13.05 0.00 3.01
2819 3019 2.208431 CGAGCTTGGATCCATGAAGTC 58.792 52.381 27.35 18.59 0.00 3.01
2820 3020 2.570135 GAGCTTGGATCCATGAAGTCC 58.430 52.381 27.35 11.77 0.00 3.85
2821 3021 1.213926 AGCTTGGATCCATGAAGTCCC 59.786 52.381 27.35 11.14 0.00 4.46
2822 3022 1.064463 GCTTGGATCCATGAAGTCCCA 60.064 52.381 27.35 4.42 0.00 4.37
2823 3023 2.423947 GCTTGGATCCATGAAGTCCCAT 60.424 50.000 27.35 0.00 0.00 4.00
2824 3024 3.220110 CTTGGATCCATGAAGTCCCATG 58.780 50.000 20.45 0.00 42.58 3.66
2825 3025 1.133699 TGGATCCATGAAGTCCCATGC 60.134 52.381 11.44 0.00 41.83 4.06
2826 3026 1.613836 GATCCATGAAGTCCCATGCC 58.386 55.000 0.00 0.00 41.83 4.40
2827 3027 0.928505 ATCCATGAAGTCCCATGCCA 59.071 50.000 0.00 0.00 41.83 4.92
2828 3028 0.928505 TCCATGAAGTCCCATGCCAT 59.071 50.000 0.00 0.00 41.83 4.40
2829 3029 2.134354 TCCATGAAGTCCCATGCCATA 58.866 47.619 0.00 0.00 41.83 2.74
2830 3030 2.718062 TCCATGAAGTCCCATGCCATAT 59.282 45.455 0.00 0.00 41.83 1.78
2831 3031 2.823747 CCATGAAGTCCCATGCCATATG 59.176 50.000 0.00 0.00 41.83 1.78
2832 3032 1.985473 TGAAGTCCCATGCCATATGC 58.015 50.000 0.00 0.00 41.77 3.14
2833 3033 0.877071 GAAGTCCCATGCCATATGCG 59.123 55.000 0.00 0.00 45.60 4.73
2834 3034 0.183492 AAGTCCCATGCCATATGCGT 59.817 50.000 0.00 0.00 45.60 5.24
2850 3050 4.767255 GTGAGCTCCACCCGCCAG 62.767 72.222 12.15 0.00 39.86 4.85
2852 3052 3.474570 GAGCTCCACCCGCCAGAT 61.475 66.667 0.87 0.00 0.00 2.90
2853 3053 3.453070 GAGCTCCACCCGCCAGATC 62.453 68.421 0.87 0.00 0.00 2.75
2854 3054 4.899239 GCTCCACCCGCCAGATCG 62.899 72.222 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
178 179 2.978452 ATCTCGGGGAAATCGCAGCG 62.978 60.000 9.06 9.06 0.00 5.18
344 346 0.730155 CGGTGAAACGATTCGGACGA 60.730 55.000 11.29 0.00 38.46 4.20
415 417 2.096220 ATGACAAGCTGCTGAGACAG 57.904 50.000 1.35 0.00 40.80 3.51
424 426 2.089201 TGCATCCTCAATGACAAGCTG 58.911 47.619 0.00 0.00 37.59 4.24
469 471 3.897122 GCCACCAACTGGACCCCA 61.897 66.667 1.86 0.00 43.95 4.96
470 472 4.678743 GGCCACCAACTGGACCCC 62.679 72.222 1.86 0.00 43.57 4.95
481 483 0.890683 CTGATTGTCTTTGGGCCACC 59.109 55.000 5.23 0.00 37.24 4.61
527 529 2.338577 AATCTCAGGGAAATCGGCAG 57.661 50.000 0.00 0.00 0.00 4.85
617 619 4.408821 GCAGGCGGTGGATGTCCA 62.409 66.667 0.00 0.00 45.30 4.02
730 732 6.043706 CCTTTGGAGTGGGAATATACAGAGAT 59.956 42.308 0.00 0.00 0.00 2.75
755 760 3.406764 ACAAGCTCCTGAAACACATCTC 58.593 45.455 0.00 0.00 0.00 2.75
820 827 1.482182 GATTGTCCTTGGGCCATTTCC 59.518 52.381 7.26 0.00 0.00 3.13
851 861 1.071605 CACTGTCAGTTTAGGCGCTC 58.928 55.000 7.64 0.00 0.00 5.03
867 877 1.275666 TACACACATAGCCCAGCACT 58.724 50.000 0.00 0.00 0.00 4.40
1059 1118 3.213506 TGCATCCAAATTAGGACCGATG 58.786 45.455 0.00 0.00 41.30 3.84
1107 1166 4.528206 TGGATGTATATCTTCTCGGTGCAT 59.472 41.667 0.00 0.00 33.68 3.96
1247 1391 3.616956 TCAGTCATCCAAGTTAGGCAG 57.383 47.619 0.00 0.00 0.00 4.85
1254 1398 7.993183 ACCGAATATTATTTCAGTCATCCAAGT 59.007 33.333 0.00 0.00 0.00 3.16
1277 1421 8.026607 ACTTGATTGTGGATGTTAATTTAACCG 58.973 33.333 14.99 0.00 37.88 4.44
1320 1464 8.862325 TGACCACTAGATTTGTCAATGTAAAT 57.138 30.769 0.00 0.00 34.98 1.40
1326 1470 7.651808 CAACTTTGACCACTAGATTTGTCAAT 58.348 34.615 16.02 5.81 44.50 2.57
1331 1475 5.437289 TGCAACTTTGACCACTAGATTTG 57.563 39.130 0.00 0.00 0.00 2.32
1371 1515 5.221945 CCCCTAGAAGGCTCCCTTTTATTAG 60.222 48.000 0.00 0.19 44.82 1.73
1402 1551 7.592938 TGTGTGAATTCAGGATTATTGAACAC 58.407 34.615 8.80 9.12 37.38 3.32
1422 1571 3.014623 AGGATGACTTGCATGATGTGTG 58.985 45.455 6.60 0.00 37.34 3.82
1520 1692 6.127366 ACCAATGACTGCAAAAGAAGAGAAAA 60.127 34.615 0.00 0.00 0.00 2.29
1544 1719 8.190784 CCACACATTTTTCATATCCTTCCTAAC 58.809 37.037 0.00 0.00 0.00 2.34
1573 1748 7.601073 TTCAATTGGATCGAGTATATCATGC 57.399 36.000 5.42 0.00 0.00 4.06
1582 1757 3.287867 AGGCATTCAATTGGATCGAGT 57.712 42.857 5.42 0.00 0.00 4.18
1608 1783 7.310609 CCTCCAATACAATTTTTCCAAGATGGT 60.311 37.037 0.00 0.00 39.03 3.55
1710 1885 1.964223 GGTCATCAGAGAGGCCGAATA 59.036 52.381 0.00 0.00 0.00 1.75
1898 2074 2.125229 AGTCTCATGCAGCAGCCG 60.125 61.111 0.00 0.00 41.13 5.52
1909 2085 3.070159 CCTTGAGGAAGTTCACAGTCTCA 59.930 47.826 5.01 5.05 37.39 3.27
1911 2087 2.224402 GCCTTGAGGAAGTTCACAGTCT 60.224 50.000 5.01 0.00 37.39 3.24
1913 2089 1.490490 TGCCTTGAGGAAGTTCACAGT 59.510 47.619 5.01 0.00 37.39 3.55
1936 2112 0.039326 AAGCAGCAAGGGATCAGCTT 59.961 50.000 0.00 0.00 36.26 3.74
1950 2126 7.324616 CCAAAGAGAAGAAAATAAACGAAGCAG 59.675 37.037 0.00 0.00 0.00 4.24
1979 2155 0.907486 TGATGCCCTCCTCACTCAAG 59.093 55.000 0.00 0.00 0.00 3.02
2003 2179 6.040842 AGAGAAATGAAAAAGGCAGCTTACAA 59.959 34.615 0.00 0.00 0.00 2.41
2010 2186 8.302438 AGAACATAAGAGAAATGAAAAAGGCAG 58.698 33.333 0.00 0.00 0.00 4.85
2013 2189 9.403110 CACAGAACATAAGAGAAATGAAAAAGG 57.597 33.333 0.00 0.00 0.00 3.11
2015 2191 7.591057 CGCACAGAACATAAGAGAAATGAAAAA 59.409 33.333 0.00 0.00 0.00 1.94
2020 2196 4.393062 ACCGCACAGAACATAAGAGAAATG 59.607 41.667 0.00 0.00 0.00 2.32
2040 2216 1.388431 GTGCACAAAACACAACAACCG 59.612 47.619 13.17 0.00 37.96 4.44
2042 2218 1.388431 CGGTGCACAAAACACAACAAC 59.612 47.619 20.43 0.00 39.87 3.32
2046 2222 2.159366 CCTTACGGTGCACAAAACACAA 60.159 45.455 20.43 1.47 39.87 3.33
2047 2223 1.402259 CCTTACGGTGCACAAAACACA 59.598 47.619 20.43 0.00 39.87 3.72
2048 2224 1.402613 ACCTTACGGTGCACAAAACAC 59.597 47.619 20.43 0.00 43.51 3.32
2049 2225 1.752683 ACCTTACGGTGCACAAAACA 58.247 45.000 20.43 0.00 43.51 2.83
2071 2251 3.771479 AGATACAGAGGTGTGCTGAATGA 59.229 43.478 0.00 0.00 37.52 2.57
2080 2260 3.239449 TGGTCACAAGATACAGAGGTGT 58.761 45.455 0.00 0.00 41.06 4.16
2081 2261 3.961480 TGGTCACAAGATACAGAGGTG 57.039 47.619 0.00 0.00 0.00 4.00
2093 2273 0.105246 AAGGCCCCAAATGGTCACAA 60.105 50.000 0.00 0.00 30.21 3.33
2105 2285 3.149981 GCATTACATCTTAGAAGGCCCC 58.850 50.000 0.00 0.00 0.00 5.80
2109 2289 7.337942 AGACAAAAGGCATTACATCTTAGAAGG 59.662 37.037 0.00 0.00 0.00 3.46
2111 2291 9.383519 CTAGACAAAAGGCATTACATCTTAGAA 57.616 33.333 0.00 0.00 0.00 2.10
2113 2293 8.948631 TCTAGACAAAAGGCATTACATCTTAG 57.051 34.615 0.00 0.00 0.00 2.18
2119 2301 8.637986 ACATTTTTCTAGACAAAAGGCATTACA 58.362 29.630 8.08 0.00 29.87 2.41
2137 2319 7.321034 GCATCAAACCGATCAAAAACATTTTTC 59.679 33.333 0.00 0.00 33.31 2.29
2138 2320 7.131565 GCATCAAACCGATCAAAAACATTTTT 58.868 30.769 0.00 0.00 34.83 1.94
2147 2329 3.673902 TCTCTGCATCAAACCGATCAAA 58.326 40.909 0.00 0.00 29.21 2.69
2180 2362 8.554835 TGTTTGGAACGAAATATATGACAAGA 57.445 30.769 0.00 0.00 0.00 3.02
2181 2363 9.787532 AATGTTTGGAACGAAATATATGACAAG 57.212 29.630 0.00 0.00 0.00 3.16
2196 2378 6.681777 ACAGAATGCTTAGAATGTTTGGAAC 58.318 36.000 0.00 0.00 42.53 3.62
2252 2434 2.358267 GCATACAGTAGACGGTAGCACT 59.642 50.000 0.00 0.00 30.58 4.40
2275 2457 4.097892 CACCAAGGTTTTCAGTTAGCAGTT 59.902 41.667 0.00 0.00 0.00 3.16
2280 2462 4.359706 GTTGCACCAAGGTTTTCAGTTAG 58.640 43.478 0.00 0.00 0.00 2.34
2281 2463 3.131400 GGTTGCACCAAGGTTTTCAGTTA 59.869 43.478 0.00 0.00 38.42 2.24
2304 2486 5.996501 ACGAAACGTGGCAACTTGCAAAA 62.997 43.478 15.61 0.00 40.30 2.44
2324 2508 1.204704 TCCACCTCAAGTATGCTCACG 59.795 52.381 0.00 0.00 0.00 4.35
2327 2511 1.474143 GCCTCCACCTCAAGTATGCTC 60.474 57.143 0.00 0.00 0.00 4.26
2347 2531 1.234821 TTGTCTGCAAGGGCTTTACG 58.765 50.000 0.00 0.00 41.91 3.18
2353 2537 1.338105 GGGAAATTTGTCTGCAAGGGC 60.338 52.381 0.00 0.00 41.68 5.19
2379 2563 5.417580 TCTTCTGTTCAAAATAATTCCCCGG 59.582 40.000 0.00 0.00 0.00 5.73
2437 2621 9.696917 ATTTCTCGCTCATAGTTTTTCATTTTT 57.303 25.926 0.00 0.00 0.00 1.94
2446 2630 9.994432 CTTGAAATTATTTCTCGCTCATAGTTT 57.006 29.630 17.16 0.00 40.32 2.66
2447 2631 8.125448 GCTTGAAATTATTTCTCGCTCATAGTT 58.875 33.333 17.16 0.00 40.32 2.24
2448 2632 7.254932 GGCTTGAAATTATTTCTCGCTCATAGT 60.255 37.037 21.20 0.00 40.32 2.12
2449 2633 7.074502 GGCTTGAAATTATTTCTCGCTCATAG 58.925 38.462 21.20 8.90 40.32 2.23
2450 2634 6.542005 TGGCTTGAAATTATTTCTCGCTCATA 59.458 34.615 21.20 10.27 40.32 2.15
2451 2635 5.357878 TGGCTTGAAATTATTTCTCGCTCAT 59.642 36.000 21.20 0.00 40.32 2.90
2452 2636 4.699735 TGGCTTGAAATTATTTCTCGCTCA 59.300 37.500 21.20 16.86 40.32 4.26
2453 2637 5.235305 TGGCTTGAAATTATTTCTCGCTC 57.765 39.130 21.20 15.39 40.32 5.03
2454 2638 4.439289 GCTGGCTTGAAATTATTTCTCGCT 60.439 41.667 21.20 0.00 40.32 4.93
2455 2639 3.793492 GCTGGCTTGAAATTATTTCTCGC 59.207 43.478 17.16 17.09 40.32 5.03
2456 2640 4.985413 TGCTGGCTTGAAATTATTTCTCG 58.015 39.130 17.16 9.85 40.32 4.04
2464 2648 6.046593 CACATATTCATGCTGGCTTGAAATT 58.953 36.000 21.54 12.52 41.30 1.82
2469 2653 4.642445 TTCACATATTCATGCTGGCTTG 57.358 40.909 2.61 2.61 35.39 4.01
2507 2691 4.151044 GTGGAACAGTAGCATTTTGCACG 61.151 47.826 1.93 0.00 43.79 5.34
2511 2695 4.582701 TTGGTGGAACAGTAGCATTTTG 57.417 40.909 0.00 0.00 41.80 2.44
2512 2696 4.649218 AGTTTGGTGGAACAGTAGCATTTT 59.351 37.500 0.00 0.00 41.80 1.82
2518 2702 8.665685 GTTTATATCAGTTTGGTGGAACAGTAG 58.334 37.037 0.00 0.00 41.80 2.57
2520 2704 7.001674 TGTTTATATCAGTTTGGTGGAACAGT 58.998 34.615 0.00 0.00 41.80 3.55
2521 2705 7.040755 TGTGTTTATATCAGTTTGGTGGAACAG 60.041 37.037 0.00 0.00 41.80 3.16
2523 2707 7.174253 TCTGTGTTTATATCAGTTTGGTGGAAC 59.826 37.037 0.00 0.00 0.00 3.62
2524 2708 7.227873 TCTGTGTTTATATCAGTTTGGTGGAA 58.772 34.615 0.00 0.00 0.00 3.53
2525 2709 6.774673 TCTGTGTTTATATCAGTTTGGTGGA 58.225 36.000 0.00 0.00 0.00 4.02
2526 2710 7.040755 TGTTCTGTGTTTATATCAGTTTGGTGG 60.041 37.037 0.00 0.00 0.00 4.61
2527 2711 7.870826 TGTTCTGTGTTTATATCAGTTTGGTG 58.129 34.615 0.00 0.00 0.00 4.17
2560 2752 6.364165 CAGACACAATAAAGCTTCACCAAATG 59.636 38.462 0.00 0.00 0.00 2.32
2572 2764 4.084537 GGACACGTCACAGACACAATAAAG 60.085 45.833 0.00 0.00 32.09 1.85
2574 2766 3.386486 GGACACGTCACAGACACAATAA 58.614 45.455 0.00 0.00 32.09 1.40
2584 2776 2.558286 GGAGTCCGGACACGTCACA 61.558 63.158 35.00 0.00 38.78 3.58
2585 2777 2.257676 GGAGTCCGGACACGTCAC 59.742 66.667 35.00 17.67 38.78 3.67
2586 2778 2.987547 GGGAGTCCGGACACGTCA 60.988 66.667 35.00 0.00 38.78 4.35
2588 2780 2.430704 TTAGGGGAGTCCGGACACGT 62.431 60.000 35.00 25.45 41.52 4.49
2596 2796 0.917533 GGGAAGGTTTAGGGGAGTCC 59.082 60.000 0.00 0.00 0.00 3.85
2598 2798 3.246758 ACATAGGGAAGGTTTAGGGGAGT 60.247 47.826 0.00 0.00 0.00 3.85
2607 2807 3.824443 CGAAACCAAACATAGGGAAGGTT 59.176 43.478 0.00 0.00 40.81 3.50
2612 2812 3.512219 AACCGAAACCAAACATAGGGA 57.488 42.857 0.00 0.00 0.00 4.20
2618 2818 1.204941 CCCACAAACCGAAACCAAACA 59.795 47.619 0.00 0.00 0.00 2.83
2630 2830 1.268625 GACATCCGAAACCCCACAAAC 59.731 52.381 0.00 0.00 0.00 2.93
2633 2833 1.377229 GGACATCCGAAACCCCACA 59.623 57.895 0.00 0.00 0.00 4.17
2669 2869 0.249280 TGTTGACATGCACGAGTCGT 60.249 50.000 13.56 13.56 42.36 4.34
2672 2872 2.221169 ACAATGTTGACATGCACGAGT 58.779 42.857 0.00 0.00 36.56 4.18
2673 2873 2.413239 GGACAATGTTGACATGCACGAG 60.413 50.000 0.00 0.00 36.56 4.18
2674 2874 1.535028 GGACAATGTTGACATGCACGA 59.465 47.619 0.00 0.00 36.56 4.35
2675 2875 1.401409 GGGACAATGTTGACATGCACG 60.401 52.381 0.00 0.00 36.56 5.34
2676 2876 1.401409 CGGGACAATGTTGACATGCAC 60.401 52.381 0.00 0.00 36.56 4.57
2677 2877 0.880441 CGGGACAATGTTGACATGCA 59.120 50.000 0.00 0.00 36.56 3.96
2678 2878 0.881118 ACGGGACAATGTTGACATGC 59.119 50.000 0.00 0.00 36.56 4.06
2679 2879 2.150390 TGACGGGACAATGTTGACATG 58.850 47.619 0.00 0.00 36.56 3.21
2680 2880 2.559698 TGACGGGACAATGTTGACAT 57.440 45.000 0.00 0.00 38.41 3.06
2681 2881 2.217750 CTTGACGGGACAATGTTGACA 58.782 47.619 0.00 0.00 0.00 3.58
2682 2882 1.069227 GCTTGACGGGACAATGTTGAC 60.069 52.381 0.00 0.00 0.00 3.18
2683 2883 1.202758 AGCTTGACGGGACAATGTTGA 60.203 47.619 0.00 0.00 0.00 3.18
2684 2884 1.238439 AGCTTGACGGGACAATGTTG 58.762 50.000 0.00 0.00 0.00 3.33
2685 2885 2.301870 TCTAGCTTGACGGGACAATGTT 59.698 45.455 0.00 0.00 0.00 2.71
2686 2886 1.899814 TCTAGCTTGACGGGACAATGT 59.100 47.619 0.00 0.00 0.00 2.71
2687 2887 2.166459 TCTCTAGCTTGACGGGACAATG 59.834 50.000 0.00 0.00 0.00 2.82
2688 2888 2.428890 CTCTCTAGCTTGACGGGACAAT 59.571 50.000 0.00 0.00 0.00 2.71
2689 2889 1.819288 CTCTCTAGCTTGACGGGACAA 59.181 52.381 0.00 0.00 0.00 3.18
2690 2890 1.464734 CTCTCTAGCTTGACGGGACA 58.535 55.000 0.00 0.00 0.00 4.02
2691 2891 0.741915 CCTCTCTAGCTTGACGGGAC 59.258 60.000 0.00 0.00 0.00 4.46
2692 2892 1.038130 GCCTCTCTAGCTTGACGGGA 61.038 60.000 13.18 1.82 0.00 5.14
2693 2893 1.439644 GCCTCTCTAGCTTGACGGG 59.560 63.158 0.00 0.00 0.00 5.28
2694 2894 1.064946 CGCCTCTCTAGCTTGACGG 59.935 63.158 0.00 0.00 0.00 4.79
2695 2895 0.665835 ATCGCCTCTCTAGCTTGACG 59.334 55.000 0.00 0.00 0.00 4.35
2696 2896 1.678627 TCATCGCCTCTCTAGCTTGAC 59.321 52.381 0.00 0.00 0.00 3.18
2697 2897 1.678627 GTCATCGCCTCTCTAGCTTGA 59.321 52.381 0.00 0.00 0.00 3.02
2698 2898 1.599171 CGTCATCGCCTCTCTAGCTTG 60.599 57.143 0.00 0.00 0.00 4.01
2699 2899 0.665835 CGTCATCGCCTCTCTAGCTT 59.334 55.000 0.00 0.00 0.00 3.74
2700 2900 0.179043 TCGTCATCGCCTCTCTAGCT 60.179 55.000 0.00 0.00 36.96 3.32
2701 2901 0.663688 TTCGTCATCGCCTCTCTAGC 59.336 55.000 0.00 0.00 36.96 3.42
2702 2902 1.333347 CGTTCGTCATCGCCTCTCTAG 60.333 57.143 0.00 0.00 36.96 2.43
2703 2903 0.656259 CGTTCGTCATCGCCTCTCTA 59.344 55.000 0.00 0.00 36.96 2.43
2704 2904 1.025113 TCGTTCGTCATCGCCTCTCT 61.025 55.000 0.00 0.00 36.96 3.10
2705 2905 0.862283 GTCGTTCGTCATCGCCTCTC 60.862 60.000 0.00 0.00 36.96 3.20
2706 2906 1.136984 GTCGTTCGTCATCGCCTCT 59.863 57.895 0.00 0.00 36.96 3.69
2707 2907 1.154093 TGTCGTTCGTCATCGCCTC 60.154 57.895 0.00 0.00 36.96 4.70
2708 2908 1.443872 GTGTCGTTCGTCATCGCCT 60.444 57.895 0.00 0.00 36.96 5.52
2709 2909 2.442188 GGTGTCGTTCGTCATCGCC 61.442 63.158 0.00 0.00 36.96 5.54
2710 2910 1.076533 ATGGTGTCGTTCGTCATCGC 61.077 55.000 0.00 0.00 36.96 4.58
2711 2911 1.059122 CAATGGTGTCGTTCGTCATCG 59.941 52.381 0.00 0.00 38.55 3.84
2712 2912 1.201921 GCAATGGTGTCGTTCGTCATC 60.202 52.381 0.00 0.00 0.00 2.92
2713 2913 0.796312 GCAATGGTGTCGTTCGTCAT 59.204 50.000 0.00 0.00 0.00 3.06
2714 2914 0.530870 TGCAATGGTGTCGTTCGTCA 60.531 50.000 0.00 0.00 0.00 4.35
2715 2915 0.796312 ATGCAATGGTGTCGTTCGTC 59.204 50.000 0.00 0.00 0.00 4.20
2716 2916 1.234821 AATGCAATGGTGTCGTTCGT 58.765 45.000 0.00 0.00 0.00 3.85
2717 2917 2.415168 AGTAATGCAATGGTGTCGTTCG 59.585 45.455 0.00 0.00 0.00 3.95
2718 2918 3.181510 GGAGTAATGCAATGGTGTCGTTC 60.182 47.826 0.00 0.00 0.00 3.95
2719 2919 2.747446 GGAGTAATGCAATGGTGTCGTT 59.253 45.455 0.00 0.00 0.00 3.85
2720 2920 2.290008 TGGAGTAATGCAATGGTGTCGT 60.290 45.455 0.00 0.00 0.00 4.34
2721 2921 2.095853 GTGGAGTAATGCAATGGTGTCG 59.904 50.000 0.00 0.00 0.00 4.35
2722 2922 2.095853 CGTGGAGTAATGCAATGGTGTC 59.904 50.000 0.00 0.00 0.00 3.67
2723 2923 2.083774 CGTGGAGTAATGCAATGGTGT 58.916 47.619 0.00 0.00 0.00 4.16
2724 2924 1.401552 CCGTGGAGTAATGCAATGGTG 59.598 52.381 0.00 0.00 0.00 4.17
2725 2925 1.280710 TCCGTGGAGTAATGCAATGGT 59.719 47.619 0.00 0.00 0.00 3.55
2726 2926 1.942657 CTCCGTGGAGTAATGCAATGG 59.057 52.381 7.79 0.00 37.47 3.16
2727 2927 2.868583 CTCTCCGTGGAGTAATGCAATG 59.131 50.000 15.28 0.00 42.49 2.82
2728 2928 2.766263 TCTCTCCGTGGAGTAATGCAAT 59.234 45.455 15.28 0.00 42.49 3.56
2729 2929 2.176045 TCTCTCCGTGGAGTAATGCAA 58.824 47.619 15.28 0.00 42.49 4.08
2730 2930 1.847328 TCTCTCCGTGGAGTAATGCA 58.153 50.000 15.28 0.00 42.49 3.96
2731 2931 3.460857 AATCTCTCCGTGGAGTAATGC 57.539 47.619 15.28 0.00 42.49 3.56
2732 2932 4.122776 CCAAATCTCTCCGTGGAGTAATG 58.877 47.826 15.28 8.72 42.49 1.90
2733 2933 4.030913 TCCAAATCTCTCCGTGGAGTAAT 58.969 43.478 15.28 7.68 42.49 1.89
2734 2934 3.194968 GTCCAAATCTCTCCGTGGAGTAA 59.805 47.826 15.28 5.74 40.79 2.24
2735 2935 2.758979 GTCCAAATCTCTCCGTGGAGTA 59.241 50.000 15.28 6.06 40.79 2.59
2736 2936 1.550976 GTCCAAATCTCTCCGTGGAGT 59.449 52.381 15.28 0.00 40.79 3.85
2737 2937 1.134670 GGTCCAAATCTCTCCGTGGAG 60.135 57.143 9.73 9.73 40.79 3.86
2738 2938 0.902531 GGTCCAAATCTCTCCGTGGA 59.097 55.000 0.00 0.00 37.83 4.02
2739 2939 0.107654 GGGTCCAAATCTCTCCGTGG 60.108 60.000 0.00 0.00 0.00 4.94
2740 2940 0.460284 CGGGTCCAAATCTCTCCGTG 60.460 60.000 0.00 0.00 33.63 4.94
2741 2941 1.898154 CGGGTCCAAATCTCTCCGT 59.102 57.895 0.00 0.00 33.63 4.69
2742 2942 1.521681 GCGGGTCCAAATCTCTCCG 60.522 63.158 0.00 0.00 40.33 4.63
2743 2943 1.153147 GGCGGGTCCAAATCTCTCC 60.153 63.158 0.00 0.00 34.01 3.71
2744 2944 1.602237 TGGCGGGTCCAAATCTCTC 59.398 57.895 0.00 0.00 43.21 3.20
2745 2945 3.820425 TGGCGGGTCCAAATCTCT 58.180 55.556 0.00 0.00 43.21 3.10
2752 2952 2.063979 CCTATGAGTGGCGGGTCCA 61.064 63.158 0.00 0.00 44.18 4.02
2753 2953 1.760875 TCCTATGAGTGGCGGGTCC 60.761 63.158 0.00 0.00 0.00 4.46
2754 2954 1.442148 GTCCTATGAGTGGCGGGTC 59.558 63.158 0.00 0.00 0.00 4.46
2755 2955 2.064581 GGTCCTATGAGTGGCGGGT 61.065 63.158 0.00 0.00 0.00 5.28
2756 2956 1.410850 ATGGTCCTATGAGTGGCGGG 61.411 60.000 0.00 0.00 0.00 6.13
2757 2957 1.338107 TATGGTCCTATGAGTGGCGG 58.662 55.000 0.00 0.00 0.00 6.13
2758 2958 6.656632 ATATATATGGTCCTATGAGTGGCG 57.343 41.667 0.00 0.00 0.00 5.69
2791 2991 0.878086 GATCCAAGCTCGCCAGTAGC 60.878 60.000 0.00 0.00 40.40 3.58
2792 2992 0.249657 GGATCCAAGCTCGCCAGTAG 60.250 60.000 6.95 0.00 0.00 2.57
2793 2993 0.975556 TGGATCCAAGCTCGCCAGTA 60.976 55.000 13.46 0.00 0.00 2.74
2794 2994 1.630126 ATGGATCCAAGCTCGCCAGT 61.630 55.000 20.67 0.00 31.23 4.00
2795 2995 1.147824 ATGGATCCAAGCTCGCCAG 59.852 57.895 20.67 0.00 31.23 4.85
2796 2996 1.153107 CATGGATCCAAGCTCGCCA 60.153 57.895 20.67 0.00 0.00 5.69
2797 2997 0.464373 TTCATGGATCCAAGCTCGCC 60.464 55.000 20.67 0.00 0.00 5.54
2798 2998 0.942962 CTTCATGGATCCAAGCTCGC 59.057 55.000 20.67 0.00 0.00 5.03
2799 2999 2.208431 GACTTCATGGATCCAAGCTCG 58.792 52.381 20.67 9.05 0.00 5.03
2800 3000 2.570135 GGACTTCATGGATCCAAGCTC 58.430 52.381 20.67 11.25 32.35 4.09
2801 3001 1.213926 GGGACTTCATGGATCCAAGCT 59.786 52.381 20.67 0.00 33.87 3.74
2802 3002 1.064463 TGGGACTTCATGGATCCAAGC 60.064 52.381 20.67 8.00 33.87 4.01
2803 3003 3.220110 CATGGGACTTCATGGATCCAAG 58.780 50.000 20.67 15.47 40.43 3.61
2804 3004 2.687614 GCATGGGACTTCATGGATCCAA 60.688 50.000 20.67 0.00 43.34 3.53
2805 3005 1.133699 GCATGGGACTTCATGGATCCA 60.134 52.381 18.88 18.88 43.34 3.41
2806 3006 1.613836 GCATGGGACTTCATGGATCC 58.386 55.000 4.20 4.20 43.34 3.36
2807 3007 1.133699 TGGCATGGGACTTCATGGATC 60.134 52.381 6.91 0.00 43.34 3.36
2808 3008 0.928505 TGGCATGGGACTTCATGGAT 59.071 50.000 6.91 0.00 43.34 3.41
2809 3009 0.928505 ATGGCATGGGACTTCATGGA 59.071 50.000 0.00 0.00 43.34 3.41
2810 3010 2.662535 TATGGCATGGGACTTCATGG 57.337 50.000 10.98 0.00 43.34 3.66
2811 3011 2.230508 GCATATGGCATGGGACTTCATG 59.769 50.000 10.98 4.26 45.26 3.07
2812 3012 2.522185 GCATATGGCATGGGACTTCAT 58.478 47.619 10.98 0.00 43.97 2.57
2813 3013 1.815021 CGCATATGGCATGGGACTTCA 60.815 52.381 10.98 0.00 45.17 3.02
2814 3014 0.877071 CGCATATGGCATGGGACTTC 59.123 55.000 10.98 0.00 45.17 3.01
2815 3015 0.183492 ACGCATATGGCATGGGACTT 59.817 50.000 10.98 0.00 45.17 3.01
2816 3016 0.535780 CACGCATATGGCATGGGACT 60.536 55.000 10.98 0.00 45.17 3.85
2817 3017 0.534877 TCACGCATATGGCATGGGAC 60.535 55.000 10.98 0.00 45.17 4.46
2818 3018 0.250424 CTCACGCATATGGCATGGGA 60.250 55.000 10.98 0.00 38.86 4.37
2819 3019 1.859427 GCTCACGCATATGGCATGGG 61.859 60.000 10.98 6.94 39.76 4.00
2820 3020 0.887836 AGCTCACGCATATGGCATGG 60.888 55.000 10.98 3.28 45.17 3.66
2821 3021 0.516001 GAGCTCACGCATATGGCATG 59.484 55.000 10.98 0.00 45.17 4.06
2822 3022 0.604780 GGAGCTCACGCATATGGCAT 60.605 55.000 17.19 4.88 45.17 4.40
2823 3023 1.227645 GGAGCTCACGCATATGGCA 60.228 57.895 17.19 0.00 45.17 4.92
2824 3024 1.227645 TGGAGCTCACGCATATGGC 60.228 57.895 17.19 0.00 39.10 4.40
2825 3025 0.882042 GGTGGAGCTCACGCATATGG 60.882 60.000 17.19 0.00 46.96 2.74
2826 3026 2.609825 GGTGGAGCTCACGCATATG 58.390 57.895 17.19 0.00 46.96 1.78
2833 3033 4.767255 CTGGCGGGTGGAGCTCAC 62.767 72.222 17.19 11.54 45.34 3.51
2835 3035 3.453070 GATCTGGCGGGTGGAGCTC 62.453 68.421 4.71 4.71 34.52 4.09
2836 3036 3.474570 GATCTGGCGGGTGGAGCT 61.475 66.667 0.00 0.00 34.52 4.09
2837 3037 4.899239 CGATCTGGCGGGTGGAGC 62.899 72.222 0.00 0.00 0.00 4.70
2847 3047 2.169789 CAGCTTCACGCCGATCTGG 61.170 63.158 0.00 0.00 40.39 3.86
2848 3048 2.806856 GCAGCTTCACGCCGATCTG 61.807 63.158 0.00 0.00 40.39 2.90
2849 3049 2.510238 GCAGCTTCACGCCGATCT 60.510 61.111 0.00 0.00 40.39 2.75
2850 3050 3.567797 GGCAGCTTCACGCCGATC 61.568 66.667 0.00 0.00 38.82 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.