Multiple sequence alignment - TraesCS5D01G361600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G361600 chr5D 100.000 4762 0 0 1 4762 440922658 440917897 0.000000e+00 8794.0
1 TraesCS5D01G361600 chr5D 86.551 922 79 16 3863 4762 440903311 440902413 0.000000e+00 974.0
2 TraesCS5D01G361600 chr5D 100.000 326 0 0 4916 5241 440917743 440917418 2.090000e-168 603.0
3 TraesCS5D01G361600 chr5D 92.593 324 24 0 4918 5241 440894471 440894148 2.860000e-127 466.0
4 TraesCS5D01G361600 chr5D 90.491 326 31 0 4916 5241 440902360 440902035 1.040000e-116 431.0
5 TraesCS5D01G361600 chr5D 84.936 312 40 6 4935 5241 441122572 441122881 5.100000e-80 309.0
6 TraesCS5D01G361600 chr5D 86.131 137 19 0 2593 2729 440904534 440904398 1.180000e-31 148.0
7 TraesCS5D01G361600 chr5D 88.350 103 8 3 4141 4239 440890736 440890634 2.560000e-23 121.0
8 TraesCS5D01G361600 chr5D 85.106 94 8 4 996 1083 440907558 440907465 2.010000e-14 91.6
9 TraesCS5D01G361600 chr5B 89.312 2573 185 40 2053 4610 536324942 536322445 0.000000e+00 3145.0
10 TraesCS5D01G361600 chr5B 80.239 754 44 33 699 1413 536326245 536325558 2.210000e-128 470.0
11 TraesCS5D01G361600 chr5B 92.284 324 25 0 4918 5241 536322211 536321888 1.330000e-125 460.0
12 TraesCS5D01G361600 chr5B 84.615 312 41 6 4935 5241 536799171 536799480 2.370000e-78 303.0
13 TraesCS5D01G361600 chr5B 77.974 227 21 16 1659 1865 536325243 536325026 1.190000e-21 115.0
14 TraesCS5D01G361600 chr5B 87.671 73 9 0 1708 1780 536366293 536366221 9.350000e-13 86.1
15 TraesCS5D01G361600 chr5A 89.385 2195 157 30 2443 4610 556891170 556889025 0.000000e+00 2693.0
16 TraesCS5D01G361600 chr5A 84.099 1176 62 47 720 1865 556892698 556891618 0.000000e+00 1020.0
17 TraesCS5D01G361600 chr5A 93.558 326 21 0 4916 5241 556879798 556879473 2.190000e-133 486.0
18 TraesCS5D01G361600 chr5A 88.710 310 34 1 4933 5241 556888839 556888530 1.380000e-100 377.0
19 TraesCS5D01G361600 chr5A 89.562 297 18 5 1924 2214 556891623 556891334 1.070000e-96 364.0
20 TraesCS5D01G361600 chr5A 77.661 667 82 35 20 646 650434118 650433479 1.400000e-90 344.0
21 TraesCS5D01G361600 chr5A 80.192 313 35 11 34 341 650434215 650433925 5.320000e-50 209.0
22 TraesCS5D01G361600 chr5A 93.860 114 7 0 2296 2409 556891283 556891170 6.980000e-39 172.0
23 TraesCS5D01G361600 chr5A 90.265 113 10 1 4362 4474 556886046 556885935 4.230000e-31 147.0
24 TraesCS5D01G361600 chrUn 93.558 326 21 0 4916 5241 326871913 326871588 2.190000e-133 486.0
25 TraesCS5D01G361600 chrUn 93.558 326 21 0 4916 5241 334634458 334634783 2.190000e-133 486.0
26 TraesCS5D01G361600 chr7B 76.410 585 100 21 11 571 292807373 292806803 1.110000e-71 281.0
27 TraesCS5D01G361600 chr7B 87.097 93 9 1 11 103 725736819 725736908 9.290000e-18 102.0
28 TraesCS5D01G361600 chr7A 75.468 587 102 24 11 571 660530164 660529594 1.130000e-61 248.0
29 TraesCS5D01G361600 chr2B 75.260 578 101 19 11 568 335236486 335235931 2.440000e-58 237.0
30 TraesCS5D01G361600 chr4D 80.498 241 35 12 11 246 337515984 337516217 1.940000e-39 174.0
31 TraesCS5D01G361600 chr4A 77.528 267 39 12 3395 3644 736761860 736762122 1.970000e-29 141.0
32 TraesCS5D01G361600 chr4A 85.185 81 7 1 3762 3837 736729610 736729690 1.560000e-10 78.7
33 TraesCS5D01G361600 chr4A 93.333 45 3 0 3028 3072 736729198 736729242 3.390000e-07 67.6
34 TraesCS5D01G361600 chr3D 98.734 79 1 0 496 574 592762394 592762316 1.970000e-29 141.0
35 TraesCS5D01G361600 chr7D 81.022 137 21 4 11 145 605864539 605864406 2.580000e-18 104.0
36 TraesCS5D01G361600 chr6B 94.595 37 2 0 3396 3432 716972525 716972561 2.040000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G361600 chr5D 440917418 440922658 5240 True 4698.50 8794 100.00000 1 5241 2 chr5D.!!$R3 5240
1 TraesCS5D01G361600 chr5D 440902035 440907558 5523 True 411.15 974 87.06975 996 5241 4 chr5D.!!$R2 4245
2 TraesCS5D01G361600 chr5D 440890634 440894471 3837 True 293.50 466 90.47150 4141 5241 2 chr5D.!!$R1 1100
3 TraesCS5D01G361600 chr5B 536321888 536326245 4357 True 1047.50 3145 84.95225 699 5241 4 chr5B.!!$R2 4542
4 TraesCS5D01G361600 chr5A 556885935 556892698 6763 True 795.50 2693 89.31350 720 5241 6 chr5A.!!$R2 4521
5 TraesCS5D01G361600 chr5A 650433479 650434215 736 True 276.50 344 78.92650 20 646 2 chr5A.!!$R3 626
6 TraesCS5D01G361600 chr7B 292806803 292807373 570 True 281.00 281 76.41000 11 571 1 chr7B.!!$R1 560
7 TraesCS5D01G361600 chr7A 660529594 660530164 570 True 248.00 248 75.46800 11 571 1 chr7A.!!$R1 560
8 TraesCS5D01G361600 chr2B 335235931 335236486 555 True 237.00 237 75.26000 11 568 1 chr2B.!!$R1 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
872 1003 0.171007 CCATGTGCGTTTTAGCCTGG 59.829 55.0 0.0 0.0 36.02 4.45 F
1403 1582 0.038892 CTGCTGCGTTCCATGCTTTT 60.039 50.0 0.0 0.0 0.00 2.27 F
2576 4358 0.032130 TCAAGTGGACTGACACGAGC 59.968 55.0 0.0 0.0 45.80 5.03 F
2729 5204 0.249868 TGCTCAGCAGGTACACACAC 60.250 55.0 0.0 0.0 33.32 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2284 2604 0.114364 AACCTGCCCGGGAAGAAAAT 59.886 50.000 32.13 9.47 36.97 1.82 R
2962 5523 0.108756 GAGGGACGAGCAACTGGTAC 60.109 60.000 0.00 0.00 0.00 3.34 R
4207 6780 0.984230 ACATGAAGACGGTGGACCAT 59.016 50.000 0.00 0.00 35.14 3.55 R
4612 7211 1.134007 GGGGGATTAAGTAACCGGTGG 60.134 57.143 8.52 0.00 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.663279 GTTGTGCTTGAGTTACCACG 57.337 50.000 0.00 0.00 0.00 4.94
49 128 1.816835 AGCGAGTTATCAGGTTCGTGA 59.183 47.619 0.00 0.00 35.61 4.35
73 152 9.850628 TGACGTATATATTACCATGCTCTTTAC 57.149 33.333 0.00 0.00 0.00 2.01
91 170 4.730949 TTACAGAGAAGTTATCGGGGTG 57.269 45.455 2.76 0.00 0.00 4.61
96 175 3.000727 GAGAAGTTATCGGGGTGTGTTG 58.999 50.000 0.00 0.00 0.00 3.33
99 181 1.202830 AGTTATCGGGGTGTGTTGCAA 60.203 47.619 0.00 0.00 0.00 4.08
104 186 1.662438 CGGGGTGTGTTGCAACAACT 61.662 55.000 32.61 0.00 41.21 3.16
105 187 0.534873 GGGGTGTGTTGCAACAACTT 59.465 50.000 32.61 0.00 41.21 2.66
106 188 1.066502 GGGGTGTGTTGCAACAACTTT 60.067 47.619 32.61 0.00 41.21 2.66
107 189 2.614229 GGGGTGTGTTGCAACAACTTTT 60.614 45.455 32.61 0.00 41.21 2.27
108 190 3.070748 GGGTGTGTTGCAACAACTTTTT 58.929 40.909 32.61 0.00 41.21 1.94
131 213 1.640917 TCTCTGGGCCGAAAGTTACT 58.359 50.000 0.00 0.00 0.00 2.24
132 214 1.275291 TCTCTGGGCCGAAAGTTACTG 59.725 52.381 0.00 0.00 0.00 2.74
144 227 4.201773 CGAAAGTTACTGCAGTGTTTGTGA 60.202 41.667 29.57 4.12 0.00 3.58
145 228 5.504010 CGAAAGTTACTGCAGTGTTTGTGAT 60.504 40.000 29.57 7.67 0.00 3.06
157 240 4.821805 AGTGTTTGTGATTGAGTTACCAGG 59.178 41.667 0.00 0.00 0.00 4.45
160 243 5.654650 TGTTTGTGATTGAGTTACCAGGTTT 59.345 36.000 0.00 0.00 0.00 3.27
161 244 5.766150 TTGTGATTGAGTTACCAGGTTTG 57.234 39.130 0.00 0.00 0.00 2.93
171 254 4.080751 AGTTACCAGGTTTGTGGCGTATAT 60.081 41.667 0.00 0.00 41.90 0.86
173 256 3.800531 ACCAGGTTTGTGGCGTATATAC 58.199 45.455 2.53 2.53 41.90 1.47
183 266 4.282449 TGTGGCGTATATACTACCATGCTT 59.718 41.667 20.96 0.00 34.18 3.91
190 277 8.861101 GCGTATATACTACCATGCTTTTTAGAG 58.139 37.037 11.05 0.00 0.00 2.43
198 285 9.740710 ACTACCATGCTTTTTAGAGAAGTTATT 57.259 29.630 0.00 0.00 0.00 1.40
217 304 6.775629 AGTTATTGGGATGTGTTACAACAACT 59.224 34.615 0.00 0.00 41.21 3.16
261 348 8.980143 AAAATATTACCATAGTGTTTGTGTGC 57.020 30.769 0.00 0.00 0.00 4.57
280 367 2.165641 TGCGAGTTATCAGATTCGTGGT 59.834 45.455 5.16 0.00 35.61 4.16
360 460 9.292195 CTATTTTACCTAGGGTCAAAAAGTGAA 57.708 33.333 14.81 0.00 38.23 3.18
381 481 3.979101 TTATCAGGTCTGTGATGCACA 57.021 42.857 0.00 0.00 42.45 4.57
395 495 4.153475 GTGATGCACAAATTACCGTGTACT 59.847 41.667 0.00 0.00 35.51 2.73
449 555 3.392616 AGAGAGAGGGCTTGTTTTTCTGA 59.607 43.478 0.00 0.00 0.00 3.27
458 564 5.353123 GGGCTTGTTTTTCTGATCGTGTATA 59.647 40.000 0.00 0.00 0.00 1.47
512 618 7.154435 TGTAATCGCTACTTGAAACTAGACT 57.846 36.000 0.00 0.00 0.00 3.24
521 627 6.532988 ACTTGAAACTAGACTAGGTGGATC 57.467 41.667 14.03 2.89 0.00 3.36
525 631 5.888724 TGAAACTAGACTAGGTGGATCTGAG 59.111 44.000 14.03 0.00 0.00 3.35
533 639 2.950781 AGGTGGATCTGAGAAGCGATA 58.049 47.619 0.00 0.00 0.00 2.92
538 644 3.007290 TGGATCTGAGAAGCGATAATGGG 59.993 47.826 0.00 0.00 0.00 4.00
539 645 3.259374 GGATCTGAGAAGCGATAATGGGA 59.741 47.826 0.00 0.00 0.00 4.37
563 669 2.224818 ACAGGTAGTGAGTTCGACTCCT 60.225 50.000 11.01 10.02 44.44 3.69
571 677 3.082548 TGAGTTCGACTCCTACCTCTTG 58.917 50.000 11.01 0.00 44.44 3.02
572 678 3.083293 GAGTTCGACTCCTACCTCTTGT 58.917 50.000 4.29 0.00 39.28 3.16
574 680 4.857679 AGTTCGACTCCTACCTCTTGTAT 58.142 43.478 0.00 0.00 0.00 2.29
578 697 7.395489 AGTTCGACTCCTACCTCTTGTATTTTA 59.605 37.037 0.00 0.00 0.00 1.52
585 704 9.257651 CTCCTACCTCTTGTATTTTATTTACCG 57.742 37.037 0.00 0.00 0.00 4.02
589 708 5.007332 CCTCTTGTATTTTATTTACCGCGCT 59.993 40.000 5.56 0.00 0.00 5.92
602 721 7.964545 ATTTACCGCGCTAGAAAATAAAAAG 57.035 32.000 5.56 0.00 0.00 2.27
603 722 6.724694 TTACCGCGCTAGAAAATAAAAAGA 57.275 33.333 5.56 0.00 0.00 2.52
604 723 5.616488 ACCGCGCTAGAAAATAAAAAGAA 57.384 34.783 5.56 0.00 0.00 2.52
606 725 6.084277 ACCGCGCTAGAAAATAAAAAGAAAG 58.916 36.000 5.56 0.00 0.00 2.62
607 726 6.084277 CCGCGCTAGAAAATAAAAAGAAAGT 58.916 36.000 5.56 0.00 0.00 2.66
608 727 6.032460 CCGCGCTAGAAAATAAAAAGAAAGTG 59.968 38.462 5.56 0.00 0.00 3.16
630 750 0.616111 AGAAGTGGTGGGATCGAGCT 60.616 55.000 0.00 0.00 0.00 4.09
646 766 3.624300 CTGAGAAGGATGCGCGCG 61.624 66.667 28.44 28.44 0.00 6.86
647 767 4.128388 TGAGAAGGATGCGCGCGA 62.128 61.111 37.18 19.53 0.00 5.87
648 768 2.659897 GAGAAGGATGCGCGCGAT 60.660 61.111 37.18 23.57 0.00 4.58
649 769 2.653022 GAGAAGGATGCGCGCGATC 61.653 63.158 37.18 29.23 0.00 3.69
650 770 4.051963 GAAGGATGCGCGCGATCG 62.052 66.667 37.18 11.69 39.07 3.69
651 771 4.873129 AAGGATGCGCGCGATCGT 62.873 61.111 37.18 27.80 38.14 3.73
652 772 4.873129 AGGATGCGCGCGATCGTT 62.873 61.111 37.18 19.68 38.14 3.85
653 773 4.341240 GGATGCGCGCGATCGTTC 62.341 66.667 37.18 20.10 38.14 3.95
663 783 1.833559 CGATCGTTCGCATCTGTCG 59.166 57.895 7.03 0.00 38.75 4.35
664 784 0.861866 CGATCGTTCGCATCTGTCGT 60.862 55.000 7.03 0.00 38.75 4.34
665 785 1.269166 GATCGTTCGCATCTGTCGTT 58.731 50.000 0.00 0.00 0.00 3.85
666 786 2.447250 GATCGTTCGCATCTGTCGTTA 58.553 47.619 0.00 0.00 0.00 3.18
667 787 2.334971 TCGTTCGCATCTGTCGTTAA 57.665 45.000 0.00 0.00 0.00 2.01
668 788 2.663808 TCGTTCGCATCTGTCGTTAAA 58.336 42.857 0.00 0.00 0.00 1.52
669 789 3.051327 TCGTTCGCATCTGTCGTTAAAA 58.949 40.909 0.00 0.00 0.00 1.52
670 790 3.676172 TCGTTCGCATCTGTCGTTAAAAT 59.324 39.130 0.00 0.00 0.00 1.82
671 791 4.013397 CGTTCGCATCTGTCGTTAAAATC 58.987 43.478 0.00 0.00 0.00 2.17
672 792 4.331962 GTTCGCATCTGTCGTTAAAATCC 58.668 43.478 0.00 0.00 0.00 3.01
673 793 3.857052 TCGCATCTGTCGTTAAAATCCT 58.143 40.909 0.00 0.00 0.00 3.24
674 794 3.616821 TCGCATCTGTCGTTAAAATCCTG 59.383 43.478 0.00 0.00 0.00 3.86
675 795 3.685058 GCATCTGTCGTTAAAATCCTGC 58.315 45.455 0.00 0.00 0.00 4.85
676 796 3.487544 GCATCTGTCGTTAAAATCCTGCC 60.488 47.826 0.00 0.00 0.00 4.85
677 797 2.343101 TCTGTCGTTAAAATCCTGCCG 58.657 47.619 0.00 0.00 0.00 5.69
678 798 2.073816 CTGTCGTTAAAATCCTGCCGT 58.926 47.619 0.00 0.00 0.00 5.68
679 799 2.070783 TGTCGTTAAAATCCTGCCGTC 58.929 47.619 0.00 0.00 0.00 4.79
680 800 1.395954 GTCGTTAAAATCCTGCCGTCC 59.604 52.381 0.00 0.00 0.00 4.79
681 801 0.372334 CGTTAAAATCCTGCCGTCCG 59.628 55.000 0.00 0.00 0.00 4.79
682 802 0.730840 GTTAAAATCCTGCCGTCCGG 59.269 55.000 0.24 0.24 38.57 5.14
683 803 0.614294 TTAAAATCCTGCCGTCCGGA 59.386 50.000 10.46 0.00 37.50 5.14
684 804 0.614294 TAAAATCCTGCCGTCCGGAA 59.386 50.000 5.23 0.00 37.50 4.30
685 805 0.676782 AAAATCCTGCCGTCCGGAAG 60.677 55.000 5.23 8.49 40.73 3.46
686 806 1.838073 AAATCCTGCCGTCCGGAAGT 61.838 55.000 16.46 0.00 39.36 3.01
687 807 1.838073 AATCCTGCCGTCCGGAAGTT 61.838 55.000 16.46 0.00 39.36 2.66
688 808 0.974010 ATCCTGCCGTCCGGAAGTTA 60.974 55.000 16.46 3.82 39.36 2.24
689 809 1.153628 CCTGCCGTCCGGAAGTTAG 60.154 63.158 16.46 12.77 39.36 2.34
690 810 1.590147 CTGCCGTCCGGAAGTTAGT 59.410 57.895 16.46 0.00 36.17 2.24
691 811 0.458025 CTGCCGTCCGGAAGTTAGTC 60.458 60.000 16.46 0.00 36.17 2.59
692 812 1.515736 GCCGTCCGGAAGTTAGTCG 60.516 63.158 16.46 8.93 37.50 4.18
693 813 1.515736 CCGTCCGGAAGTTAGTCGC 60.516 63.158 16.46 0.00 37.50 5.19
694 814 1.866496 CGTCCGGAAGTTAGTCGCG 60.866 63.158 5.23 0.00 0.00 5.87
695 815 1.211190 GTCCGGAAGTTAGTCGCGT 59.789 57.895 5.23 0.00 0.00 6.01
696 816 0.796113 GTCCGGAAGTTAGTCGCGTC 60.796 60.000 5.23 0.00 0.00 5.19
697 817 1.866496 CCGGAAGTTAGTCGCGTCG 60.866 63.158 5.77 0.00 0.00 5.12
709 829 8.566008 AGTTAGTCGCGTCGTTTAATTATTAT 57.434 30.769 5.77 0.00 0.00 1.28
712 832 6.124759 AGTCGCGTCGTTTAATTATTATTGC 58.875 36.000 5.77 0.00 0.00 3.56
713 833 6.019318 AGTCGCGTCGTTTAATTATTATTGCT 60.019 34.615 5.77 0.00 0.00 3.91
715 835 5.275170 CGCGTCGTTTAATTATTATTGCTCG 59.725 40.000 0.00 0.00 0.00 5.03
717 837 5.275170 CGTCGTTTAATTATTATTGCTCGCG 59.725 40.000 0.00 0.00 0.00 5.87
718 838 5.558888 GTCGTTTAATTATTATTGCTCGCGG 59.441 40.000 6.13 0.00 0.00 6.46
740 860 1.671742 GAGCCCAACTTGGTCTCGA 59.328 57.895 3.13 0.00 35.17 4.04
761 881 1.695242 TCTTGCGTAAACAAGGGGAGA 59.305 47.619 4.58 0.00 45.77 3.71
762 882 2.304761 TCTTGCGTAAACAAGGGGAGAT 59.695 45.455 4.58 0.00 45.77 2.75
763 883 2.396590 TGCGTAAACAAGGGGAGATC 57.603 50.000 0.00 0.00 0.00 2.75
872 1003 0.171007 CCATGTGCGTTTTAGCCTGG 59.829 55.000 0.00 0.00 36.02 4.45
896 1027 2.420466 GGGACGGACGGGATTAGC 59.580 66.667 0.00 0.00 0.00 3.09
897 1028 2.428925 GGGACGGACGGGATTAGCA 61.429 63.158 0.00 0.00 0.00 3.49
898 1029 1.227176 GGACGGACGGGATTAGCAC 60.227 63.158 0.00 0.00 0.00 4.40
1103 1247 0.478507 CCTCCTCCTCCTCCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
1110 1254 1.475034 CCTCCTCCTCTCTCGACTCTG 60.475 61.905 0.00 0.00 0.00 3.35
1111 1255 1.209504 CTCCTCCTCTCTCGACTCTGT 59.790 57.143 0.00 0.00 0.00 3.41
1112 1256 1.208535 TCCTCCTCTCTCGACTCTGTC 59.791 57.143 0.00 0.00 0.00 3.51
1113 1257 1.209504 CCTCCTCTCTCGACTCTGTCT 59.790 57.143 0.00 0.00 0.00 3.41
1139 1289 1.616187 GCATCCATCCATCCATCCAGG 60.616 57.143 0.00 0.00 39.47 4.45
1142 1292 1.432852 CCATCCATCCATCCAGGGCT 61.433 60.000 0.00 0.00 38.24 5.19
1153 1303 4.778143 CAGGGCTGGCCACCGTAC 62.778 72.222 23.25 5.48 37.98 3.67
1161 1314 4.078516 GCCACCGTACGCCTCCTT 62.079 66.667 10.49 0.00 0.00 3.36
1165 1318 1.001145 ACCGTACGCCTCCTTCTCT 60.001 57.895 10.49 0.00 0.00 3.10
1320 1489 3.561241 TGGGCGTTGGCACCAGTA 61.561 61.111 0.00 0.00 43.95 2.74
1321 1490 3.053896 GGGCGTTGGCACCAGTAC 61.054 66.667 0.00 0.00 42.47 2.73
1327 1496 3.185299 TTGGCACCAGTACCCACCG 62.185 63.158 0.00 0.00 0.00 4.94
1361 1530 2.187100 CTTCTCCTTCTTCTGGGAGCT 58.813 52.381 4.31 0.00 46.22 4.09
1403 1582 0.038892 CTGCTGCGTTCCATGCTTTT 60.039 50.000 0.00 0.00 0.00 2.27
1404 1583 0.388659 TGCTGCGTTCCATGCTTTTT 59.611 45.000 0.00 0.00 0.00 1.94
1432 1611 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
1477 1660 4.870636 TGGGGAATAGTAGTAAGTTCCGA 58.129 43.478 4.56 0.00 40.77 4.55
1502 1693 1.535462 CTTGGAGAATTTTGCGTCCGT 59.465 47.619 0.00 0.00 31.05 4.69
1522 1713 2.028043 GTCCGTCCGTCCGTTTGT 59.972 61.111 0.00 0.00 0.00 2.83
1564 1758 5.099575 GCTCGTGTTTTCTTTTCCTCAAAA 58.900 37.500 0.00 0.00 0.00 2.44
1581 1775 4.569180 ACGCTGGTGCTGCCTGTT 62.569 61.111 0.00 0.00 38.33 3.16
1619 1813 3.706373 GCCTTCGCCTCCTCCACA 61.706 66.667 0.00 0.00 0.00 4.17
1644 1838 1.379642 GCTGACAAGGCAGGCATACC 61.380 60.000 4.89 0.00 36.41 2.73
1645 1839 0.749454 CTGACAAGGCAGGCATACCC 60.749 60.000 0.00 0.00 36.11 3.69
1703 1991 4.859798 GTCTCTTTCGGATCACAGTACAAG 59.140 45.833 0.00 0.00 0.00 3.16
1727 2018 3.007398 AGCATATACCAGAAGCTACCAGC 59.993 47.826 0.00 0.00 42.84 4.85
1750 2041 3.464111 AGCAGCAGCAACAAAGATTTT 57.536 38.095 3.17 0.00 45.49 1.82
1758 2049 8.216453 CAGCAGCAACAAAGATTTTGTAAATAC 58.784 33.333 7.53 0.00 31.50 1.89
1761 2056 8.216453 CAGCAACAAAGATTTTGTAAATACAGC 58.784 33.333 7.53 4.70 37.52 4.40
1764 2059 9.462174 CAACAAAGATTTTGTAAATACAGCAGA 57.538 29.630 7.53 0.00 37.52 4.26
1780 2075 4.194640 CAGCAGATAAAAGCTTAGCTCCA 58.805 43.478 7.36 0.00 38.25 3.86
1824 2130 4.832608 CGGCTACCAGCGGTTCCC 62.833 72.222 5.57 6.07 43.62 3.97
1851 2162 6.294065 GGATCATTCAGCCATTTTGATCTCTC 60.294 42.308 10.11 0.00 41.42 3.20
1853 2164 5.821470 TCATTCAGCCATTTTGATCTCTCTC 59.179 40.000 0.00 0.00 0.00 3.20
1856 2167 4.715792 TCAGCCATTTTGATCTCTCTCTCT 59.284 41.667 0.00 0.00 0.00 3.10
1857 2168 5.051816 CAGCCATTTTGATCTCTCTCTCTC 58.948 45.833 0.00 0.00 0.00 3.20
1858 2169 4.964262 AGCCATTTTGATCTCTCTCTCTCT 59.036 41.667 0.00 0.00 0.00 3.10
1859 2170 5.069516 AGCCATTTTGATCTCTCTCTCTCTC 59.930 44.000 0.00 0.00 0.00 3.20
1860 2171 5.069516 GCCATTTTGATCTCTCTCTCTCTCT 59.930 44.000 0.00 0.00 0.00 3.10
1861 2172 6.736794 GCCATTTTGATCTCTCTCTCTCTCTC 60.737 46.154 0.00 0.00 0.00 3.20
1862 2173 6.548622 CCATTTTGATCTCTCTCTCTCTCTCT 59.451 42.308 0.00 0.00 0.00 3.10
1863 2174 7.255381 CCATTTTGATCTCTCTCTCTCTCTCTC 60.255 44.444 0.00 0.00 0.00 3.20
1864 2175 6.566079 TTTGATCTCTCTCTCTCTCTCTCT 57.434 41.667 0.00 0.00 0.00 3.10
1865 2176 5.798125 TGATCTCTCTCTCTCTCTCTCTC 57.202 47.826 0.00 0.00 0.00 3.20
1866 2177 5.462240 TGATCTCTCTCTCTCTCTCTCTCT 58.538 45.833 0.00 0.00 0.00 3.10
1867 2178 5.538053 TGATCTCTCTCTCTCTCTCTCTCTC 59.462 48.000 0.00 0.00 0.00 3.20
1868 2179 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1869 2180 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1870 2181 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1871 2182 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1872 2183 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1873 2184 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1874 2185 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1875 2186 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1876 2187 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1877 2188 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1878 2189 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1879 2190 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1880 2191 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1881 2192 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1882 2193 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1883 2194 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1884 2195 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1885 2196 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1886 2197 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1887 2198 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1888 2199 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1889 2200 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
1890 2201 6.673583 TCTCTCTCTCTCTCTCTCTCTCTTA 58.326 44.000 0.00 0.00 0.00 2.10
1891 2202 7.301420 TCTCTCTCTCTCTCTCTCTCTCTTAT 58.699 42.308 0.00 0.00 0.00 1.73
1892 2203 7.786943 TCTCTCTCTCTCTCTCTCTCTCTTATT 59.213 40.741 0.00 0.00 0.00 1.40
1893 2204 8.324191 TCTCTCTCTCTCTCTCTCTCTTATTT 57.676 38.462 0.00 0.00 0.00 1.40
1894 2205 8.206867 TCTCTCTCTCTCTCTCTCTCTTATTTG 58.793 40.741 0.00 0.00 0.00 2.32
1895 2206 8.089625 TCTCTCTCTCTCTCTCTCTTATTTGA 57.910 38.462 0.00 0.00 0.00 2.69
1896 2207 8.717717 TCTCTCTCTCTCTCTCTCTTATTTGAT 58.282 37.037 0.00 0.00 0.00 2.57
1897 2208 9.347240 CTCTCTCTCTCTCTCTCTTATTTGATT 57.653 37.037 0.00 0.00 0.00 2.57
1898 2209 9.699410 TCTCTCTCTCTCTCTCTTATTTGATTT 57.301 33.333 0.00 0.00 0.00 2.17
1918 2229 2.724977 TTTTTGTGTGGTTGTTGCGA 57.275 40.000 0.00 0.00 0.00 5.10
1919 2230 2.724977 TTTTGTGTGGTTGTTGCGAA 57.275 40.000 0.00 0.00 0.00 4.70
1920 2231 2.724977 TTTGTGTGGTTGTTGCGAAA 57.275 40.000 0.00 0.00 0.00 3.46
1921 2232 2.724977 TTGTGTGGTTGTTGCGAAAA 57.275 40.000 0.00 0.00 0.00 2.29
1922 2233 2.724977 TGTGTGGTTGTTGCGAAAAA 57.275 40.000 0.00 0.00 0.00 1.94
1932 2243 6.183360 TGGTTGTTGCGAAAAACTCTCTTATT 60.183 34.615 0.00 0.00 0.00 1.40
1938 2249 8.968242 GTTGCGAAAAACTCTCTTATTTGAATT 58.032 29.630 0.00 0.00 0.00 2.17
1965 2276 3.576982 AGGAGACGTGTCTGAAAACCATA 59.423 43.478 12.92 0.00 40.61 2.74
1973 2284 5.179368 CGTGTCTGAAAACCATACTTGACAT 59.821 40.000 0.00 0.00 35.97 3.06
1976 2287 6.942005 TGTCTGAAAACCATACTTGACATCAT 59.058 34.615 0.00 0.00 0.00 2.45
1979 2290 8.321353 TCTGAAAACCATACTTGACATCATAGT 58.679 33.333 0.00 0.00 0.00 2.12
1984 2295 7.055667 ACCATACTTGACATCATAGTACAGG 57.944 40.000 0.00 14.55 32.42 4.00
1985 2296 6.042093 ACCATACTTGACATCATAGTACAGGG 59.958 42.308 17.21 14.44 31.66 4.45
1986 2297 6.267699 CCATACTTGACATCATAGTACAGGGA 59.732 42.308 0.00 0.00 0.00 4.20
1987 2298 5.860941 ACTTGACATCATAGTACAGGGAG 57.139 43.478 0.00 0.00 0.00 4.30
1988 2299 5.519808 ACTTGACATCATAGTACAGGGAGA 58.480 41.667 0.00 0.00 0.00 3.71
1990 2301 6.097554 ACTTGACATCATAGTACAGGGAGAAG 59.902 42.308 0.00 0.00 0.00 2.85
1991 2302 4.342378 TGACATCATAGTACAGGGAGAAGC 59.658 45.833 0.00 0.00 0.00 3.86
1992 2303 4.551671 ACATCATAGTACAGGGAGAAGCT 58.448 43.478 0.00 0.00 0.00 3.74
1993 2304 5.706447 ACATCATAGTACAGGGAGAAGCTA 58.294 41.667 0.00 0.00 0.00 3.32
1994 2305 6.136857 ACATCATAGTACAGGGAGAAGCTAA 58.863 40.000 0.00 0.00 0.00 3.09
1995 2306 6.266558 ACATCATAGTACAGGGAGAAGCTAAG 59.733 42.308 0.00 0.00 0.00 2.18
1996 2307 4.585162 TCATAGTACAGGGAGAAGCTAAGC 59.415 45.833 0.00 0.00 0.00 3.09
1999 2310 0.908198 ACAGGGAGAAGCTAAGCAGG 59.092 55.000 0.00 0.00 0.00 4.85
2016 2327 0.937441 AGGAGATCAGCAGGGGACTA 59.063 55.000 0.00 0.00 40.21 2.59
2040 2351 2.657143 AGGAGACTTGATCCTACCGAC 58.343 52.381 0.00 0.00 45.58 4.79
2042 2353 2.959707 GGAGACTTGATCCTACCGACAT 59.040 50.000 0.00 0.00 33.77 3.06
2047 2364 2.748209 TGATCCTACCGACATCAGGA 57.252 50.000 0.00 0.00 42.52 3.86
2049 2366 2.091830 TGATCCTACCGACATCAGGACT 60.092 50.000 0.00 0.00 41.18 3.85
2070 2390 1.354368 GGGAAGATGGGTTTCCTGTCA 59.646 52.381 4.23 0.00 42.97 3.58
2219 2539 3.947196 CAGCTTCCATTGGCACACTATAA 59.053 43.478 0.00 0.00 39.29 0.98
2220 2540 4.398988 CAGCTTCCATTGGCACACTATAAA 59.601 41.667 0.00 0.00 39.29 1.40
2222 2542 4.157656 GCTTCCATTGGCACACTATAAACA 59.842 41.667 0.00 0.00 39.29 2.83
2224 2544 6.449635 TTCCATTGGCACACTATAAACATC 57.550 37.500 0.00 0.00 39.29 3.06
2225 2545 4.887071 TCCATTGGCACACTATAAACATCC 59.113 41.667 0.00 0.00 39.29 3.51
2226 2546 4.644234 CCATTGGCACACTATAAACATCCA 59.356 41.667 0.00 0.00 39.29 3.41
2227 2547 5.126869 CCATTGGCACACTATAAACATCCAA 59.873 40.000 0.00 0.00 39.29 3.53
2244 2564 2.173519 CCAATGTTTCACCCTGAGCAT 58.826 47.619 0.00 0.00 0.00 3.79
2245 2565 3.010027 TCCAATGTTTCACCCTGAGCATA 59.990 43.478 0.00 0.00 0.00 3.14
2246 2566 3.763360 CCAATGTTTCACCCTGAGCATAA 59.237 43.478 0.00 0.00 0.00 1.90
2249 2569 6.238842 CCAATGTTTCACCCTGAGCATAATAG 60.239 42.308 0.00 0.00 0.00 1.73
2282 2602 6.182507 TGTTATCGGCTAATCCCATTACTT 57.817 37.500 0.00 0.00 0.00 2.24
2283 2603 5.995282 TGTTATCGGCTAATCCCATTACTTG 59.005 40.000 0.00 0.00 0.00 3.16
2284 2604 4.974645 ATCGGCTAATCCCATTACTTGA 57.025 40.909 0.00 0.00 0.00 3.02
2289 2609 6.262273 TCGGCTAATCCCATTACTTGATTTTC 59.738 38.462 0.00 0.00 31.55 2.29
2293 2613 8.138074 GCTAATCCCATTACTTGATTTTCTTCC 58.862 37.037 0.00 0.00 31.55 3.46
2324 2646 3.207778 TGTTTTTACAGTCTTCACCCCG 58.792 45.455 0.00 0.00 0.00 5.73
2390 2712 1.134848 GTCATCTCCTGGTGAGTCAGC 60.135 57.143 15.47 15.47 42.12 4.26
2392 2714 1.326213 ATCTCCTGGTGAGTCAGCGG 61.326 60.000 21.86 21.86 42.12 5.52
2393 2715 3.655810 CTCCTGGTGAGTCAGCGGC 62.656 68.421 23.12 0.00 36.97 6.53
2418 2741 6.817765 TCATCAGGTTTCATAGTTTCCAAC 57.182 37.500 0.00 0.00 0.00 3.77
2421 2744 6.633500 TCAGGTTTCATAGTTTCCAACAAG 57.367 37.500 0.00 0.00 0.00 3.16
2423 2746 4.280929 AGGTTTCATAGTTTCCAACAAGGC 59.719 41.667 0.00 0.00 37.29 4.35
2425 2748 5.452636 GGTTTCATAGTTTCCAACAAGGCAA 60.453 40.000 0.00 0.00 37.29 4.52
2426 2749 6.223120 GTTTCATAGTTTCCAACAAGGCAAT 58.777 36.000 0.00 0.00 37.29 3.56
2438 3188 6.152661 TCCAACAAGGCAATCAGTTAAATAGG 59.847 38.462 0.00 0.00 37.29 2.57
2461 3211 2.855180 CTGCAATTCGGTGAACATGTC 58.145 47.619 0.00 0.00 0.00 3.06
2527 4298 3.498774 AACAAGACATCCAGCTCAAGT 57.501 42.857 0.00 0.00 0.00 3.16
2574 4356 1.399714 ACTCAAGTGGACTGACACGA 58.600 50.000 0.00 0.00 45.80 4.35
2576 4358 0.032130 TCAAGTGGACTGACACGAGC 59.968 55.000 0.00 0.00 45.80 5.03
2729 5204 0.249868 TGCTCAGCAGGTACACACAC 60.250 55.000 0.00 0.00 33.32 3.82
2730 5205 0.249868 GCTCAGCAGGTACACACACA 60.250 55.000 0.00 0.00 0.00 3.72
2731 5206 1.502231 CTCAGCAGGTACACACACAC 58.498 55.000 0.00 0.00 0.00 3.82
2732 5207 0.827368 TCAGCAGGTACACACACACA 59.173 50.000 0.00 0.00 0.00 3.72
2749 5224 5.967674 CACACACAATTTCAGACTTTGAGTC 59.032 40.000 0.00 0.00 45.38 3.36
2787 5337 6.653020 TGGTATCCATATCATGATGCTAACC 58.347 40.000 18.72 16.25 0.00 2.85
2789 5339 3.599343 TCCATATCATGATGCTAACCGC 58.401 45.455 18.72 0.00 39.77 5.68
2811 5363 2.011222 TCCGGCATCGACCAAAAATAC 58.989 47.619 0.00 0.00 39.00 1.89
2813 5365 1.740585 CGGCATCGACCAAAAATACCA 59.259 47.619 0.00 0.00 39.00 3.25
2966 5527 3.436700 GCATAATTTGCCACCAGTACC 57.563 47.619 0.00 0.00 46.15 3.34
2967 5528 2.757868 GCATAATTTGCCACCAGTACCA 59.242 45.455 0.00 0.00 46.15 3.25
3068 5629 1.848652 ATGGACGTACACCTACAGCT 58.151 50.000 0.33 0.00 0.00 4.24
3127 5688 4.021925 AAGAGCGTCCAGTGCCCC 62.022 66.667 0.00 0.00 0.00 5.80
3277 5840 0.397816 TGGTTGGTTGGTTCTTGGGG 60.398 55.000 0.00 0.00 0.00 4.96
3289 5852 0.327867 TCTTGGGGGCATCTCCAGAT 60.328 55.000 0.00 0.00 36.21 2.90
3294 5857 1.063717 GGGGGCATCTCCAGATTTCAA 60.064 52.381 0.00 0.00 36.21 2.69
3310 5873 5.698545 AGATTTCAAAGAAACTGACTCGGAG 59.301 40.000 2.83 2.83 0.00 4.63
3341 5904 0.539901 AGGCTCCACTACTGTCGTGT 60.540 55.000 10.96 0.00 0.00 4.49
3375 5938 1.412343 CCAACAACAAAGGGTTCTGGG 59.588 52.381 0.00 0.00 37.72 4.45
3376 5939 2.107366 CAACAACAAAGGGTTCTGGGT 58.893 47.619 0.00 0.00 37.72 4.51
3377 5940 3.292460 CAACAACAAAGGGTTCTGGGTA 58.708 45.455 0.00 0.00 37.72 3.69
3493 6056 8.633561 CATTTATCATTTCTAGGGGAAAGGTTC 58.366 37.037 0.00 0.00 45.61 3.62
3494 6057 7.525158 TTATCATTTCTAGGGGAAAGGTTCT 57.475 36.000 0.00 0.00 45.61 3.01
3495 6058 5.860648 TCATTTCTAGGGGAAAGGTTCTT 57.139 39.130 0.00 0.00 45.61 2.52
3496 6059 5.816682 TCATTTCTAGGGGAAAGGTTCTTC 58.183 41.667 0.00 0.00 45.61 2.87
3497 6060 5.551977 TCATTTCTAGGGGAAAGGTTCTTCT 59.448 40.000 0.00 0.00 45.61 2.85
3641 6204 3.199442 TCTCTGGAGTTGATGGGGTAA 57.801 47.619 0.00 0.00 0.00 2.85
3653 6216 3.010027 TGATGGGGTAAGAAGCAACATCA 59.990 43.478 0.00 0.00 42.04 3.07
3654 6217 3.071874 TGGGGTAAGAAGCAACATCAG 57.928 47.619 0.00 0.00 0.00 2.90
3666 6229 3.576118 AGCAACATCAGTGTCTGTCTACT 59.424 43.478 2.36 0.00 37.67 2.57
3688 6251 6.335777 ACTTGCAGATGATAATTTTTCCTGC 58.664 36.000 0.00 0.00 43.94 4.85
3689 6252 6.154021 ACTTGCAGATGATAATTTTTCCTGCT 59.846 34.615 0.00 0.00 43.99 4.24
3738 6301 3.323115 TCAGTGCTCATTCAGTCTCACTT 59.677 43.478 0.00 0.00 33.08 3.16
3750 6313 6.901081 TCAGTCTCACTTCAATGACTAAGA 57.099 37.500 0.00 0.00 37.64 2.10
3752 6315 7.726216 TCAGTCTCACTTCAATGACTAAGAAA 58.274 34.615 0.00 0.00 37.64 2.52
3755 6318 8.997323 AGTCTCACTTCAATGACTAAGAAATTG 58.003 33.333 0.00 0.00 37.92 2.32
3832 6395 3.248024 ACACAAGGTAGGGATCTGACAA 58.752 45.455 0.00 0.00 0.00 3.18
3833 6396 3.008049 ACACAAGGTAGGGATCTGACAAC 59.992 47.826 0.00 0.00 0.00 3.32
3834 6397 2.572104 ACAAGGTAGGGATCTGACAACC 59.428 50.000 0.00 0.00 0.00 3.77
3835 6398 2.840651 CAAGGTAGGGATCTGACAACCT 59.159 50.000 0.00 0.00 38.98 3.50
3836 6399 3.207044 AGGTAGGGATCTGACAACCTT 57.793 47.619 2.51 0.00 33.59 3.50
3837 6400 3.532102 AGGTAGGGATCTGACAACCTTT 58.468 45.455 2.51 0.00 33.59 3.11
3838 6401 3.519913 AGGTAGGGATCTGACAACCTTTC 59.480 47.826 2.51 0.00 33.59 2.62
3839 6402 3.370633 GGTAGGGATCTGACAACCTTTCC 60.371 52.174 2.51 3.38 34.59 3.13
3842 6405 2.552373 GGGATCTGACAACCTTTCCGTT 60.552 50.000 0.00 0.00 0.00 4.44
3849 6412 0.719465 CAACCTTTCCGTTCCGATCG 59.281 55.000 8.51 8.51 0.00 3.69
3877 6440 4.299586 TCATTTGGTAGCAGTTCATCCA 57.700 40.909 0.00 0.00 0.00 3.41
3889 6458 1.526887 GTTCATCCACACAGTGTCGTG 59.473 52.381 2.14 15.00 42.81 4.35
3904 6473 0.594110 TCGTGCCCGAAAACAATTCC 59.406 50.000 0.00 0.00 40.86 3.01
4183 6756 2.885135 TCTTCCTGTGGACGTACCTA 57.115 50.000 0.00 0.00 39.86 3.08
4186 6759 2.592102 TCCTGTGGACGTACCTAGTT 57.408 50.000 0.00 0.00 39.86 2.24
4192 6765 0.801067 GGACGTACCTAGTTGCTGCG 60.801 60.000 0.00 0.00 35.41 5.18
4195 6768 0.801067 CGTACCTAGTTGCTGCGGTC 60.801 60.000 0.00 0.00 0.00 4.79
4254 6834 2.662309 CCTGAAGCAGGCAACCATT 58.338 52.632 0.00 0.00 45.13 3.16
4277 6857 7.954788 TTAACAGTTCAATTTTGTAATGGGC 57.045 32.000 0.00 0.00 29.66 5.36
4287 6867 0.623723 TGTAATGGGCCAGGGAGAAC 59.376 55.000 13.78 4.15 0.00 3.01
4461 7049 2.422093 GGAAGGATCCCTGTGATGGAAC 60.422 54.545 8.55 0.00 40.10 3.62
4610 7209 1.205055 GTAAGAAGCTACCCTGCCCT 58.795 55.000 0.00 0.00 0.00 5.19
4612 7211 0.621082 AAGAAGCTACCCTGCCCTTC 59.379 55.000 0.00 0.00 35.19 3.46
4614 7213 1.541368 AAGCTACCCTGCCCTTCCA 60.541 57.895 0.00 0.00 0.00 3.53
4616 7215 2.998949 CTACCCTGCCCTTCCACC 59.001 66.667 0.00 0.00 0.00 4.61
4628 7257 3.538591 CCCTTCCACCGGTTACTTAATC 58.461 50.000 2.97 0.00 0.00 1.75
4636 7265 1.808891 CGGTTACTTAATCCCCCTGCG 60.809 57.143 0.00 0.00 0.00 5.18
4647 7276 1.604378 CCCCTGCGGACTTCTGAAT 59.396 57.895 0.00 0.00 0.00 2.57
4656 7294 3.003480 CGGACTTCTGAATTCTGGTTCC 58.997 50.000 11.89 12.72 0.00 3.62
4665 7303 2.568623 ATTCTGGTTCCGCAGACTTT 57.431 45.000 0.00 0.00 0.00 2.66
4666 7304 1.593196 TTCTGGTTCCGCAGACTTTG 58.407 50.000 0.00 0.00 0.00 2.77
4732 7373 9.368416 ACTAGTATATGGAAAGAGCATAGACAA 57.632 33.333 0.00 0.00 0.00 3.18
4734 7375 8.894768 AGTATATGGAAAGAGCATAGACAAAC 57.105 34.615 0.00 0.00 0.00 2.93
4944 7585 4.097741 AGCAGACAACAACATTTGCACTAA 59.902 37.500 0.00 0.00 34.17 2.24
4980 7621 5.057149 GGATCAACTGTCCACATACCATAC 58.943 45.833 0.00 0.00 35.76 2.39
4982 7623 5.084818 TCAACTGTCCACATACCATACAG 57.915 43.478 0.00 0.00 42.53 2.74
5000 7641 3.525537 ACAGGTGATAGTCATCGCAAAG 58.474 45.455 1.11 0.00 42.44 2.77
5024 7665 5.242615 GGCTGGGGATATCAAAATCTCTTTC 59.757 44.000 4.83 0.00 0.00 2.62
5030 7671 9.755804 GGGGATATCAAAATCTCTTTCAAAATC 57.244 33.333 4.83 0.00 0.00 2.17
5037 7678 8.702438 TCAAAATCTCTTTCAAAATCAAATCGC 58.298 29.630 0.00 0.00 0.00 4.58
5041 7682 4.484236 TCTTTCAAAATCAAATCGCGCAT 58.516 34.783 8.75 0.00 0.00 4.73
5052 7693 0.958091 ATCGCGCATCTCTAGAAGCT 59.042 50.000 8.75 0.00 36.69 3.74
5059 7700 4.286910 CGCATCTCTAGAAGCTCTGTTAC 58.713 47.826 5.74 0.00 36.69 2.50
5174 7815 4.800471 CAGAACAAAGAACTTGGCAAAGTC 59.200 41.667 7.02 1.20 46.15 3.01
5226 7867 7.708322 GTGTTCAATACTATTGCTCTGAGATGA 59.292 37.037 9.28 0.00 0.00 2.92
5232 7873 6.291648 ACTATTGCTCTGAGATGAAGTTCA 57.708 37.500 8.27 8.27 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.263217 CCGTGGTAACTCAAGCACAAC 59.737 52.381 6.94 0.00 45.87 3.32
1 2 1.134340 ACCGTGGTAACTCAAGCACAA 60.134 47.619 6.94 0.00 45.87 3.33
3 4 0.865769 CACCGTGGTAACTCAAGCAC 59.134 55.000 0.00 0.00 42.93 4.40
4 5 0.466543 ACACCGTGGTAACTCAAGCA 59.533 50.000 3.03 0.00 37.61 3.91
5 6 1.589803 AACACCGTGGTAACTCAAGC 58.410 50.000 3.03 0.00 37.61 4.01
7 8 2.678836 CACAAACACCGTGGTAACTCAA 59.321 45.455 3.03 0.00 37.61 3.02
8 9 2.093606 TCACAAACACCGTGGTAACTCA 60.094 45.455 3.03 0.00 35.03 3.41
17 18 0.461339 AACTCGCTCACAAACACCGT 60.461 50.000 0.00 0.00 0.00 4.83
19 20 3.064207 TGATAACTCGCTCACAAACACC 58.936 45.455 0.00 0.00 0.00 4.16
49 128 9.856488 CTGTAAAGAGCATGGTAATATATACGT 57.144 33.333 0.00 0.00 0.00 3.57
73 152 2.233922 ACACACCCCGATAACTTCTCTG 59.766 50.000 0.00 0.00 0.00 3.35
85 164 1.226831 GTTGTTGCAACACACCCCG 60.227 57.895 31.17 0.00 38.92 5.73
108 190 2.358322 ACTTTCGGCCCAGAGAAAAA 57.642 45.000 0.00 0.00 36.14 1.94
111 193 1.975680 AGTAACTTTCGGCCCAGAGAA 59.024 47.619 0.00 0.00 0.00 2.87
112 194 1.275291 CAGTAACTTTCGGCCCAGAGA 59.725 52.381 0.00 0.00 0.00 3.10
113 195 1.726853 CAGTAACTTTCGGCCCAGAG 58.273 55.000 0.00 0.00 0.00 3.35
114 196 0.321298 GCAGTAACTTTCGGCCCAGA 60.321 55.000 0.00 0.00 0.00 3.86
116 198 0.605319 CTGCAGTAACTTTCGGCCCA 60.605 55.000 5.25 0.00 0.00 5.36
118 200 0.517316 CACTGCAGTAACTTTCGGCC 59.483 55.000 21.20 0.00 0.00 6.13
119 201 1.226746 ACACTGCAGTAACTTTCGGC 58.773 50.000 21.20 0.00 0.00 5.54
120 202 3.064820 ACAAACACTGCAGTAACTTTCGG 59.935 43.478 21.20 7.04 0.00 4.30
121 203 4.028383 CACAAACACTGCAGTAACTTTCG 58.972 43.478 21.20 7.85 0.00 3.46
122 204 5.229921 TCACAAACACTGCAGTAACTTTC 57.770 39.130 21.20 0.00 0.00 2.62
131 213 4.036262 GGTAACTCAATCACAAACACTGCA 59.964 41.667 0.00 0.00 0.00 4.41
132 214 4.036262 TGGTAACTCAATCACAAACACTGC 59.964 41.667 0.00 0.00 37.61 4.40
144 227 2.890945 GCCACAAACCTGGTAACTCAAT 59.109 45.455 0.00 0.00 33.30 2.57
145 228 2.303175 GCCACAAACCTGGTAACTCAA 58.697 47.619 0.00 0.00 33.30 3.02
157 240 5.107220 GCATGGTAGTATATACGCCACAAAC 60.107 44.000 24.57 15.06 38.32 2.93
160 243 3.830178 AGCATGGTAGTATATACGCCACA 59.170 43.478 24.57 15.50 38.32 4.17
161 244 4.451629 AGCATGGTAGTATATACGCCAC 57.548 45.455 24.57 16.89 38.32 5.01
173 256 9.994432 CAATAACTTCTCTAAAAAGCATGGTAG 57.006 33.333 0.00 0.00 0.00 3.18
183 266 8.934023 AACACATCCCAATAACTTCTCTAAAA 57.066 30.769 0.00 0.00 0.00 1.52
190 277 7.209471 TGTTGTAACACATCCCAATAACTTC 57.791 36.000 0.00 0.00 33.17 3.01
198 285 4.431416 AGAGTTGTTGTAACACATCCCA 57.569 40.909 0.00 0.00 38.92 4.37
227 314 9.474313 ACACTATGGTAATATTTTTGACCACAT 57.526 29.630 9.50 0.00 44.49 3.21
237 324 7.119992 TCGCACACAAACACTATGGTAATATTT 59.880 33.333 0.00 0.00 0.00 1.40
239 326 6.110033 TCGCACACAAACACTATGGTAATAT 58.890 36.000 0.00 0.00 0.00 1.28
240 327 5.480205 TCGCACACAAACACTATGGTAATA 58.520 37.500 0.00 0.00 0.00 0.98
241 328 4.320023 TCGCACACAAACACTATGGTAAT 58.680 39.130 0.00 0.00 0.00 1.89
259 346 2.165641 ACCACGAATCTGATAACTCGCA 59.834 45.455 9.46 0.00 34.70 5.10
261 348 3.770666 ACACCACGAATCTGATAACTCG 58.229 45.455 8.28 8.28 37.33 4.18
330 417 8.999905 TTTTTGACCCTAGGTAAAATAGTTGT 57.000 30.769 8.29 0.00 36.09 3.32
331 418 9.074576 ACTTTTTGACCCTAGGTAAAATAGTTG 57.925 33.333 8.29 0.69 41.96 3.16
333 420 8.442374 TCACTTTTTGACCCTAGGTAAAATAGT 58.558 33.333 8.29 11.74 43.90 2.12
334 421 8.857694 TCACTTTTTGACCCTAGGTAAAATAG 57.142 34.615 8.29 11.25 39.45 1.73
335 422 9.816787 ATTCACTTTTTGACCCTAGGTAAAATA 57.183 29.630 8.29 0.35 36.09 1.40
360 460 4.492494 TGTGCATCACAGACCTGATAAT 57.508 40.909 3.76 0.00 39.62 1.28
413 518 5.279960 GCCCTCTCTCTTTCTCTCTCTTTTT 60.280 44.000 0.00 0.00 0.00 1.94
422 527 3.694043 AACAAGCCCTCTCTCTTTCTC 57.306 47.619 0.00 0.00 0.00 2.87
430 535 3.126000 CGATCAGAAAAACAAGCCCTCTC 59.874 47.826 0.00 0.00 0.00 3.20
432 537 2.814336 ACGATCAGAAAAACAAGCCCTC 59.186 45.455 0.00 0.00 0.00 4.30
434 540 2.293399 ACACGATCAGAAAAACAAGCCC 59.707 45.455 0.00 0.00 0.00 5.19
485 591 8.706035 GTCTAGTTTCAAGTAGCGATTACAAAA 58.294 33.333 0.00 0.00 34.56 2.44
495 601 5.418209 TCCACCTAGTCTAGTTTCAAGTAGC 59.582 44.000 6.15 0.00 33.02 3.58
497 603 7.339721 CAGATCCACCTAGTCTAGTTTCAAGTA 59.660 40.741 6.15 0.00 0.00 2.24
512 618 2.437085 TCGCTTCTCAGATCCACCTA 57.563 50.000 0.00 0.00 0.00 3.08
521 627 3.459232 TGTCCCATTATCGCTTCTCAG 57.541 47.619 0.00 0.00 0.00 3.35
525 631 2.614057 CCTGTTGTCCCATTATCGCTTC 59.386 50.000 0.00 0.00 0.00 3.86
533 639 2.979678 ACTCACTACCTGTTGTCCCATT 59.020 45.455 0.00 0.00 0.00 3.16
538 644 3.004524 AGTCGAACTCACTACCTGTTGTC 59.995 47.826 0.00 0.00 0.00 3.18
539 645 2.957006 AGTCGAACTCACTACCTGTTGT 59.043 45.455 0.00 0.00 0.00 3.32
543 649 2.438411 AGGAGTCGAACTCACTACCTG 58.562 52.381 14.26 0.00 46.79 4.00
563 669 6.018832 GCGCGGTAAATAAAATACAAGAGGTA 60.019 38.462 8.83 0.00 36.16 3.08
571 677 8.998558 ATTTTCTAGCGCGGTAAATAAAATAC 57.001 30.769 26.86 4.32 0.00 1.89
574 680 9.837525 TTTTATTTTCTAGCGCGGTAAATAAAA 57.162 25.926 32.89 32.89 42.40 1.52
578 697 7.754625 TCTTTTTATTTTCTAGCGCGGTAAAT 58.245 30.769 19.65 18.82 0.00 1.40
583 702 6.032460 CACTTTCTTTTTATTTTCTAGCGCGG 59.968 38.462 8.83 0.00 0.00 6.46
585 704 6.308041 CCCACTTTCTTTTTATTTTCTAGCGC 59.692 38.462 0.00 0.00 0.00 5.92
597 716 4.402474 CACCACTTCTCCCACTTTCTTTTT 59.598 41.667 0.00 0.00 0.00 1.94
602 721 1.545651 CCCACCACTTCTCCCACTTTC 60.546 57.143 0.00 0.00 0.00 2.62
603 722 0.478507 CCCACCACTTCTCCCACTTT 59.521 55.000 0.00 0.00 0.00 2.66
604 723 0.401395 TCCCACCACTTCTCCCACTT 60.401 55.000 0.00 0.00 0.00 3.16
606 725 0.253327 GATCCCACCACTTCTCCCAC 59.747 60.000 0.00 0.00 0.00 4.61
607 726 1.264749 CGATCCCACCACTTCTCCCA 61.265 60.000 0.00 0.00 0.00 4.37
608 727 0.976073 TCGATCCCACCACTTCTCCC 60.976 60.000 0.00 0.00 0.00 4.30
630 750 3.430565 ATCGCGCGCATCCTTCTCA 62.431 57.895 32.61 3.42 0.00 3.27
646 766 1.269166 AACGACAGATGCGAACGATC 58.731 50.000 0.00 0.00 0.00 3.69
647 767 2.554806 TAACGACAGATGCGAACGAT 57.445 45.000 0.00 0.00 0.00 3.73
648 768 2.334971 TTAACGACAGATGCGAACGA 57.665 45.000 0.00 0.00 0.00 3.85
649 769 3.427516 TTTTAACGACAGATGCGAACG 57.572 42.857 0.00 0.00 0.00 3.95
650 770 4.092968 AGGATTTTAACGACAGATGCGAAC 59.907 41.667 0.00 0.00 0.00 3.95
651 771 4.092821 CAGGATTTTAACGACAGATGCGAA 59.907 41.667 0.00 0.00 0.00 4.70
652 772 3.616821 CAGGATTTTAACGACAGATGCGA 59.383 43.478 0.00 0.00 0.00 5.10
653 773 3.785505 GCAGGATTTTAACGACAGATGCG 60.786 47.826 0.00 0.00 0.00 4.73
654 774 3.487544 GGCAGGATTTTAACGACAGATGC 60.488 47.826 0.00 0.00 0.00 3.91
655 775 3.242413 CGGCAGGATTTTAACGACAGATG 60.242 47.826 0.00 0.00 0.00 2.90
656 776 2.936498 CGGCAGGATTTTAACGACAGAT 59.064 45.455 0.00 0.00 0.00 2.90
657 777 2.289195 ACGGCAGGATTTTAACGACAGA 60.289 45.455 0.00 0.00 0.00 3.41
658 778 2.073816 ACGGCAGGATTTTAACGACAG 58.926 47.619 0.00 0.00 0.00 3.51
659 779 2.070783 GACGGCAGGATTTTAACGACA 58.929 47.619 0.00 0.00 0.00 4.35
660 780 1.395954 GGACGGCAGGATTTTAACGAC 59.604 52.381 0.00 0.00 0.00 4.34
661 781 1.729284 GGACGGCAGGATTTTAACGA 58.271 50.000 0.00 0.00 0.00 3.85
662 782 0.372334 CGGACGGCAGGATTTTAACG 59.628 55.000 0.00 0.00 0.00 3.18
663 783 0.730840 CCGGACGGCAGGATTTTAAC 59.269 55.000 0.00 0.00 0.00 2.01
664 784 0.614294 TCCGGACGGCAGGATTTTAA 59.386 50.000 5.83 0.00 33.20 1.52
665 785 0.614294 TTCCGGACGGCAGGATTTTA 59.386 50.000 12.17 0.00 38.21 1.52
666 786 0.676782 CTTCCGGACGGCAGGATTTT 60.677 55.000 12.17 0.00 38.21 1.82
667 787 1.078426 CTTCCGGACGGCAGGATTT 60.078 57.895 12.17 0.00 38.21 2.17
668 788 1.838073 AACTTCCGGACGGCAGGATT 61.838 55.000 12.17 0.00 38.21 3.01
669 789 0.974010 TAACTTCCGGACGGCAGGAT 60.974 55.000 12.17 0.00 38.21 3.24
670 790 1.601419 CTAACTTCCGGACGGCAGGA 61.601 60.000 5.83 5.83 36.55 3.86
671 791 1.153628 CTAACTTCCGGACGGCAGG 60.154 63.158 13.17 0.00 32.78 4.85
672 792 0.458025 GACTAACTTCCGGACGGCAG 60.458 60.000 13.17 8.82 34.68 4.85
673 793 1.588082 GACTAACTTCCGGACGGCA 59.412 57.895 13.17 0.00 34.68 5.69
674 794 1.515736 CGACTAACTTCCGGACGGC 60.516 63.158 13.17 0.00 34.68 5.68
675 795 1.515736 GCGACTAACTTCCGGACGG 60.516 63.158 13.17 3.96 0.00 4.79
676 796 1.866496 CGCGACTAACTTCCGGACG 60.866 63.158 1.83 4.48 0.00 4.79
677 797 0.796113 GACGCGACTAACTTCCGGAC 60.796 60.000 15.93 0.00 0.00 4.79
678 798 1.503542 GACGCGACTAACTTCCGGA 59.496 57.895 15.93 0.00 0.00 5.14
679 799 1.866496 CGACGCGACTAACTTCCGG 60.866 63.158 15.93 0.00 0.00 5.14
680 800 0.727122 AACGACGCGACTAACTTCCG 60.727 55.000 15.93 4.23 0.00 4.30
681 801 1.412387 AAACGACGCGACTAACTTCC 58.588 50.000 15.93 0.00 0.00 3.46
682 802 4.812862 ATTAAACGACGCGACTAACTTC 57.187 40.909 15.93 0.00 0.00 3.01
683 803 6.875926 ATAATTAAACGACGCGACTAACTT 57.124 33.333 15.93 0.33 0.00 2.66
684 804 6.875926 AATAATTAAACGACGCGACTAACT 57.124 33.333 15.93 0.00 0.00 2.24
685 805 9.074316 CAATAATAATTAAACGACGCGACTAAC 57.926 33.333 15.93 0.00 0.00 2.34
686 806 7.788846 GCAATAATAATTAAACGACGCGACTAA 59.211 33.333 15.93 1.69 0.00 2.24
687 807 7.167968 AGCAATAATAATTAAACGACGCGACTA 59.832 33.333 15.93 0.00 0.00 2.59
688 808 6.019318 AGCAATAATAATTAAACGACGCGACT 60.019 34.615 15.93 0.00 0.00 4.18
689 809 6.124759 AGCAATAATAATTAAACGACGCGAC 58.875 36.000 15.93 5.54 0.00 5.19
690 810 6.276611 AGCAATAATAATTAAACGACGCGA 57.723 33.333 15.93 0.00 0.00 5.87
691 811 5.275170 CGAGCAATAATAATTAAACGACGCG 59.725 40.000 3.53 3.53 0.00 6.01
692 812 5.056449 GCGAGCAATAATAATTAAACGACGC 59.944 40.000 0.00 0.00 0.00 5.19
693 813 5.275170 CGCGAGCAATAATAATTAAACGACG 59.725 40.000 0.00 0.00 0.00 5.12
694 814 5.558888 CCGCGAGCAATAATAATTAAACGAC 59.441 40.000 8.23 0.00 0.00 4.34
695 815 5.333492 CCCGCGAGCAATAATAATTAAACGA 60.333 40.000 8.23 0.00 0.00 3.85
696 816 4.843984 CCCGCGAGCAATAATAATTAAACG 59.156 41.667 8.23 0.00 0.00 3.60
697 817 5.151389 CCCCGCGAGCAATAATAATTAAAC 58.849 41.667 8.23 0.00 0.00 2.01
734 854 3.060895 CCTTGTTTACGCAAGATCGAGAC 59.939 47.826 7.32 0.00 46.34 3.36
740 860 2.304761 TCTCCCCTTGTTTACGCAAGAT 59.695 45.455 7.32 0.00 46.34 2.40
761 881 1.730501 CGCATCCAGTGTCAAGTGAT 58.269 50.000 0.00 0.00 0.00 3.06
762 882 0.950555 GCGCATCCAGTGTCAAGTGA 60.951 55.000 0.30 0.00 0.00 3.41
763 883 1.499056 GCGCATCCAGTGTCAAGTG 59.501 57.895 0.30 0.00 0.00 3.16
787 914 1.914634 CGTCTCCATCTCTTTGACCG 58.085 55.000 0.00 0.00 0.00 4.79
883 1014 0.318784 GCTAGTGCTAATCCCGTCCG 60.319 60.000 0.00 0.00 36.03 4.79
884 1015 0.750850 TGCTAGTGCTAATCCCGTCC 59.249 55.000 0.00 0.00 40.48 4.79
885 1016 1.681793 TCTGCTAGTGCTAATCCCGTC 59.318 52.381 0.00 0.00 40.48 4.79
886 1017 1.683917 CTCTGCTAGTGCTAATCCCGT 59.316 52.381 0.00 0.00 40.48 5.28
887 1018 1.000283 CCTCTGCTAGTGCTAATCCCG 60.000 57.143 0.00 0.00 40.48 5.14
888 1019 2.320781 TCCTCTGCTAGTGCTAATCCC 58.679 52.381 0.00 0.00 40.48 3.85
889 1020 3.244044 CCTTCCTCTGCTAGTGCTAATCC 60.244 52.174 0.00 0.00 40.48 3.01
890 1021 3.639094 TCCTTCCTCTGCTAGTGCTAATC 59.361 47.826 0.00 0.00 40.48 1.75
891 1022 3.640967 CTCCTTCCTCTGCTAGTGCTAAT 59.359 47.826 0.00 0.00 40.48 1.73
892 1023 3.027412 CTCCTTCCTCTGCTAGTGCTAA 58.973 50.000 0.00 0.00 40.48 3.09
893 1024 2.660572 CTCCTTCCTCTGCTAGTGCTA 58.339 52.381 0.00 0.00 40.48 3.49
894 1025 1.484038 CTCCTTCCTCTGCTAGTGCT 58.516 55.000 0.00 0.00 40.48 4.40
895 1026 0.463620 CCTCCTTCCTCTGCTAGTGC 59.536 60.000 0.00 0.00 40.20 4.40
896 1027 2.031120 CTCCTCCTTCCTCTGCTAGTG 58.969 57.143 0.00 0.00 0.00 2.74
897 1028 1.063266 CCTCCTCCTTCCTCTGCTAGT 60.063 57.143 0.00 0.00 0.00 2.57
898 1029 1.703411 CCTCCTCCTTCCTCTGCTAG 58.297 60.000 0.00 0.00 0.00 3.42
988 1120 0.880278 CACCGCATCCACCTATTCCG 60.880 60.000 0.00 0.00 0.00 4.30
1103 1247 0.527169 ATGCGATGCAGACAGAGTCG 60.527 55.000 0.00 0.00 43.65 4.18
1110 1254 0.533531 TGGATGGATGCGATGCAGAC 60.534 55.000 0.00 0.00 43.65 3.51
1111 1255 0.399075 ATGGATGGATGCGATGCAGA 59.601 50.000 0.00 0.00 43.65 4.26
1112 1256 0.803117 GATGGATGGATGCGATGCAG 59.197 55.000 0.00 0.00 43.65 4.41
1113 1257 0.607217 GGATGGATGGATGCGATGCA 60.607 55.000 0.00 0.00 44.86 3.96
1146 1296 1.139095 GAGAAGGAGGCGTACGGTG 59.861 63.158 18.39 0.00 0.00 4.94
1150 1300 1.726533 CGGGAGAGAAGGAGGCGTAC 61.727 65.000 0.00 0.00 0.00 3.67
1151 1301 1.453379 CGGGAGAGAAGGAGGCGTA 60.453 63.158 0.00 0.00 0.00 4.42
1152 1302 2.756283 CGGGAGAGAAGGAGGCGT 60.756 66.667 0.00 0.00 0.00 5.68
1153 1303 2.756283 ACGGGAGAGAAGGAGGCG 60.756 66.667 0.00 0.00 0.00 5.52
1154 1304 1.380650 AGACGGGAGAGAAGGAGGC 60.381 63.158 0.00 0.00 0.00 4.70
1155 1305 0.753848 GGAGACGGGAGAGAAGGAGG 60.754 65.000 0.00 0.00 0.00 4.30
1309 1478 2.840576 GGTGGGTACTGGTGCCAA 59.159 61.111 9.82 0.00 37.05 4.52
1310 1479 3.632080 CGGTGGGTACTGGTGCCA 61.632 66.667 9.82 0.00 37.05 4.92
1313 1482 4.752879 CGGCGGTGGGTACTGGTG 62.753 72.222 0.00 0.00 33.62 4.17
1315 1484 4.446413 GACGGCGGTGGGTACTGG 62.446 72.222 13.24 0.00 33.62 4.00
1316 1485 2.444700 AAAGACGGCGGTGGGTACTG 62.445 60.000 13.24 0.00 36.22 2.74
1317 1486 0.899717 TAAAGACGGCGGTGGGTACT 60.900 55.000 13.24 0.00 0.00 2.73
1318 1487 0.176449 ATAAAGACGGCGGTGGGTAC 59.824 55.000 13.24 0.00 0.00 3.34
1319 1488 0.903942 AATAAAGACGGCGGTGGGTA 59.096 50.000 13.24 0.00 0.00 3.69
1320 1489 0.037160 AAATAAAGACGGCGGTGGGT 59.963 50.000 13.24 0.00 0.00 4.51
1321 1490 0.450184 CAAATAAAGACGGCGGTGGG 59.550 55.000 13.24 0.00 0.00 4.61
1327 1496 3.010420 AGGAGAAGCAAATAAAGACGGC 58.990 45.455 0.00 0.00 0.00 5.68
1361 1530 1.480683 GGTAGGAGATGGACGGATGGA 60.481 57.143 0.00 0.00 0.00 3.41
1403 1582 9.898152 AGAAGAAGAAGAAGAAGAAGAAGAAAA 57.102 29.630 0.00 0.00 0.00 2.29
1404 1583 9.898152 AAGAAGAAGAAGAAGAAGAAGAAGAAA 57.102 29.630 0.00 0.00 0.00 2.52
1410 1589 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
1411 1590 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
1412 1591 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
1413 1592 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
1414 1593 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
1415 1594 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
1416 1595 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
1417 1596 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
1418 1597 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
1419 1598 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
1420 1599 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
1421 1600 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
1422 1601 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
1432 1611 6.543831 CCAAGGTTGAAGAAGAAGAAGAAGAA 59.456 38.462 0.00 0.00 0.00 2.52
1477 1660 3.744660 ACGCAAAATTCTCCAAGACTCT 58.255 40.909 0.00 0.00 0.00 3.24
1546 1740 4.862018 CAGCGTTTTGAGGAAAAGAAAACA 59.138 37.500 0.00 0.00 38.80 2.83
1581 1775 3.609475 CGTAAAGCACTTGTGCGTTTAA 58.391 40.909 25.85 11.24 37.62 1.52
1619 1813 2.020694 GCCTGCCTTGTCAGCATACAT 61.021 52.381 0.00 0.00 40.04 2.29
1723 2014 2.045634 TTGCTGCTGCTAGGCTGG 60.046 61.111 17.00 0.00 40.48 4.85
1727 2018 1.527034 TCTTTGTTGCTGCTGCTAGG 58.473 50.000 17.00 1.07 40.48 3.02
1750 2041 8.612619 GCTAAGCTTTTATCTGCTGTATTTACA 58.387 33.333 3.20 0.00 39.71 2.41
1758 2049 4.194640 TGGAGCTAAGCTTTTATCTGCTG 58.805 43.478 3.20 0.00 39.88 4.41
1761 2056 5.371526 TCCATGGAGCTAAGCTTTTATCTG 58.628 41.667 11.44 0.00 39.88 2.90
1780 2075 0.554305 TCTGGATGGCATTGCTCCAT 59.446 50.000 17.22 9.55 46.35 3.41
1824 2130 4.994907 TCAAAATGGCTGAATGATCCAG 57.005 40.909 0.00 0.00 32.78 3.86
1851 2162 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1853 2164 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1856 2167 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1857 2168 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1858 2169 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1859 2170 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1860 2171 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1861 2172 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1862 2173 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1863 2174 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1864 2175 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1865 2176 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1866 2177 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1867 2178 5.867903 AAGAGAGAGAGAGAGAGAGAGAG 57.132 47.826 0.00 0.00 0.00 3.20
1868 2179 7.921041 AATAAGAGAGAGAGAGAGAGAGAGA 57.079 40.000 0.00 0.00 0.00 3.10
1869 2180 8.206867 TCAAATAAGAGAGAGAGAGAGAGAGAG 58.793 40.741 0.00 0.00 0.00 3.20
1870 2181 8.089625 TCAAATAAGAGAGAGAGAGAGAGAGA 57.910 38.462 0.00 0.00 0.00 3.10
1871 2182 8.915057 ATCAAATAAGAGAGAGAGAGAGAGAG 57.085 38.462 0.00 0.00 0.00 3.20
1872 2183 9.699410 AAATCAAATAAGAGAGAGAGAGAGAGA 57.301 33.333 0.00 0.00 0.00 3.10
1899 2210 2.724977 TCGCAACAACCACACAAAAA 57.275 40.000 0.00 0.00 0.00 1.94
1900 2211 2.724977 TTCGCAACAACCACACAAAA 57.275 40.000 0.00 0.00 0.00 2.44
1901 2212 2.724977 TTTCGCAACAACCACACAAA 57.275 40.000 0.00 0.00 0.00 2.83
1902 2213 2.724977 TTTTCGCAACAACCACACAA 57.275 40.000 0.00 0.00 0.00 3.33
1903 2214 2.029828 AGTTTTTCGCAACAACCACACA 60.030 40.909 0.00 0.00 0.00 3.72
1904 2215 2.596862 GAGTTTTTCGCAACAACCACAC 59.403 45.455 0.00 0.00 0.00 3.82
1905 2216 2.490115 AGAGTTTTTCGCAACAACCACA 59.510 40.909 0.00 0.00 0.00 4.17
1906 2217 3.105937 GAGAGTTTTTCGCAACAACCAC 58.894 45.455 0.00 0.00 0.00 4.16
1907 2218 3.013921 AGAGAGTTTTTCGCAACAACCA 58.986 40.909 0.00 0.00 0.00 3.67
1908 2219 3.692791 AGAGAGTTTTTCGCAACAACC 57.307 42.857 0.00 0.00 0.00 3.77
1909 2220 7.431084 TCAAATAAGAGAGTTTTTCGCAACAAC 59.569 33.333 0.00 0.00 0.00 3.32
1910 2221 7.476667 TCAAATAAGAGAGTTTTTCGCAACAA 58.523 30.769 0.00 0.00 0.00 2.83
1911 2222 7.022055 TCAAATAAGAGAGTTTTTCGCAACA 57.978 32.000 0.00 0.00 0.00 3.33
1912 2223 7.908193 TTCAAATAAGAGAGTTTTTCGCAAC 57.092 32.000 0.00 0.00 0.00 4.17
1913 2224 9.528018 AAATTCAAATAAGAGAGTTTTTCGCAA 57.472 25.926 0.00 0.00 0.00 4.85
1914 2225 8.967218 CAAATTCAAATAAGAGAGTTTTTCGCA 58.033 29.630 0.00 0.00 0.00 5.10
1915 2226 8.968242 ACAAATTCAAATAAGAGAGTTTTTCGC 58.032 29.630 0.00 0.00 0.00 4.70
1919 2230 9.971922 CCTGACAAATTCAAATAAGAGAGTTTT 57.028 29.630 0.00 0.00 32.21 2.43
1920 2231 9.354673 TCCTGACAAATTCAAATAAGAGAGTTT 57.645 29.630 0.00 0.00 32.21 2.66
1921 2232 8.924511 TCCTGACAAATTCAAATAAGAGAGTT 57.075 30.769 0.00 0.00 32.21 3.01
1922 2233 8.378565 TCTCCTGACAAATTCAAATAAGAGAGT 58.621 33.333 0.00 0.00 32.21 3.24
1932 2243 3.804036 ACACGTCTCCTGACAAATTCAA 58.196 40.909 0.00 0.00 43.06 2.69
1938 2249 1.687563 TCAGACACGTCTCCTGACAA 58.312 50.000 0.00 0.00 43.06 3.18
1965 2276 5.519808 TCTCCCTGTACTATGATGTCAAGT 58.480 41.667 0.00 0.00 0.00 3.16
1973 2284 4.585162 GCTTAGCTTCTCCCTGTACTATGA 59.415 45.833 0.00 0.00 0.00 2.15
1976 2287 3.954904 CTGCTTAGCTTCTCCCTGTACTA 59.045 47.826 5.60 0.00 0.00 1.82
1979 2290 2.111384 CCTGCTTAGCTTCTCCCTGTA 58.889 52.381 5.60 0.00 0.00 2.74
1984 2295 2.697751 TGATCTCCTGCTTAGCTTCTCC 59.302 50.000 5.60 0.00 0.00 3.71
1985 2296 3.799917 GCTGATCTCCTGCTTAGCTTCTC 60.800 52.174 5.60 0.00 36.86 2.87
1986 2297 2.102925 GCTGATCTCCTGCTTAGCTTCT 59.897 50.000 5.60 0.00 36.86 2.85
1987 2298 2.158986 TGCTGATCTCCTGCTTAGCTTC 60.159 50.000 5.60 0.00 40.01 3.86
1988 2299 1.836166 TGCTGATCTCCTGCTTAGCTT 59.164 47.619 5.60 0.00 40.01 3.74
1990 2301 1.540797 CCTGCTGATCTCCTGCTTAGC 60.541 57.143 0.00 0.00 40.01 3.09
1991 2302 1.070445 CCCTGCTGATCTCCTGCTTAG 59.930 57.143 0.00 0.00 40.01 2.18
1992 2303 1.126488 CCCTGCTGATCTCCTGCTTA 58.874 55.000 0.00 0.00 40.01 3.09
1993 2304 1.633915 CCCCTGCTGATCTCCTGCTT 61.634 60.000 0.00 0.00 40.01 3.91
1994 2305 2.071262 CCCCTGCTGATCTCCTGCT 61.071 63.158 0.00 0.00 40.01 4.24
1995 2306 2.068821 TCCCCTGCTGATCTCCTGC 61.069 63.158 0.00 0.00 39.79 4.85
1996 2307 0.690411 AGTCCCCTGCTGATCTCCTG 60.690 60.000 0.00 0.00 0.00 3.86
1999 2310 1.691434 CCTTAGTCCCCTGCTGATCTC 59.309 57.143 0.00 0.00 0.00 2.75
2016 2327 3.648739 GGTAGGATCAAGTCTCCTCCTT 58.351 50.000 0.00 0.00 42.25 3.36
2035 2346 0.544357 TTCCCAGTCCTGATGTCGGT 60.544 55.000 0.00 0.00 0.00 4.69
2037 2348 1.186200 TCTTCCCAGTCCTGATGTCG 58.814 55.000 0.00 0.00 0.00 4.35
2038 2349 2.158842 CCATCTTCCCAGTCCTGATGTC 60.159 54.545 0.00 0.00 34.44 3.06
2039 2350 1.842562 CCATCTTCCCAGTCCTGATGT 59.157 52.381 0.00 0.00 34.44 3.06
2040 2351 1.142465 CCCATCTTCCCAGTCCTGATG 59.858 57.143 0.00 0.00 35.59 3.07
2042 2353 0.119155 ACCCATCTTCCCAGTCCTGA 59.881 55.000 0.00 0.00 0.00 3.86
2047 2364 1.355720 CAGGAAACCCATCTTCCCAGT 59.644 52.381 0.00 0.00 42.98 4.00
2049 2366 1.354368 GACAGGAAACCCATCTTCCCA 59.646 52.381 0.00 0.00 42.98 4.37
2070 2390 2.049063 GAAGCCACGACGAGCAGT 60.049 61.111 15.05 4.52 0.00 4.40
2172 2492 0.321564 CCTTGTTCATGTCCCTGCGA 60.322 55.000 0.00 0.00 0.00 5.10
2222 2542 2.225091 TGCTCAGGGTGAAACATTGGAT 60.225 45.455 0.00 0.00 39.98 3.41
2224 2544 1.619654 TGCTCAGGGTGAAACATTGG 58.380 50.000 0.00 0.00 39.98 3.16
2225 2545 5.587388 ATTATGCTCAGGGTGAAACATTG 57.413 39.130 0.00 0.00 39.98 2.82
2226 2546 6.426587 ACTATTATGCTCAGGGTGAAACATT 58.573 36.000 0.00 0.00 39.98 2.71
2227 2547 6.006275 ACTATTATGCTCAGGGTGAAACAT 57.994 37.500 0.00 0.00 39.98 2.71
2244 2564 8.015185 AGCCGATAACAAAGGAAGTACTATTA 57.985 34.615 0.00 0.00 0.00 0.98
2245 2565 6.885922 AGCCGATAACAAAGGAAGTACTATT 58.114 36.000 0.00 0.00 0.00 1.73
2246 2566 6.481434 AGCCGATAACAAAGGAAGTACTAT 57.519 37.500 0.00 0.00 0.00 2.12
2249 2569 6.202379 GGATTAGCCGATAACAAAGGAAGTAC 59.798 42.308 0.00 0.00 0.00 2.73
2265 2585 6.263168 AGAAAATCAAGTAATGGGATTAGCCG 59.737 38.462 0.00 0.00 37.63 5.52
2282 2602 0.323360 CCTGCCCGGGAAGAAAATCA 60.323 55.000 32.13 11.72 0.00 2.57
2283 2603 0.323451 ACCTGCCCGGGAAGAAAATC 60.323 55.000 32.13 6.81 36.97 2.17
2284 2604 0.114364 AACCTGCCCGGGAAGAAAAT 59.886 50.000 32.13 9.47 36.97 1.82
2289 2609 1.112916 AAAACAACCTGCCCGGGAAG 61.113 55.000 29.31 26.21 36.97 3.46
2293 2613 1.000717 CTGTAAAAACAACCTGCCCGG 60.001 52.381 0.00 0.00 39.35 5.73
2324 2646 1.205893 AGGTTGGCGAAGATGAGAGAC 59.794 52.381 0.00 0.00 0.00 3.36
2390 2712 3.535561 ACTATGAAACCTGATGAAGCCG 58.464 45.455 0.00 0.00 0.00 5.52
2392 2714 5.415701 TGGAAACTATGAAACCTGATGAAGC 59.584 40.000 0.00 0.00 0.00 3.86
2393 2715 7.308435 GTTGGAAACTATGAAACCTGATGAAG 58.692 38.462 0.00 0.00 45.32 3.02
2418 2741 5.126061 AGCACCTATTTAACTGATTGCCTTG 59.874 40.000 0.00 0.00 0.00 3.61
2421 2744 4.734695 GCAGCACCTATTTAACTGATTGCC 60.735 45.833 0.00 0.00 0.00 4.52
2423 2746 5.565592 TGCAGCACCTATTTAACTGATTG 57.434 39.130 0.00 0.00 0.00 2.67
2425 2748 6.458751 CGAATTGCAGCACCTATTTAACTGAT 60.459 38.462 0.00 0.00 0.00 2.90
2426 2749 5.163764 CGAATTGCAGCACCTATTTAACTGA 60.164 40.000 0.00 0.00 0.00 3.41
2438 3188 0.310543 TGTTCACCGAATTGCAGCAC 59.689 50.000 0.00 0.00 0.00 4.40
2461 3211 2.359900 GAACATGGTGCTAACTCTGGG 58.640 52.381 0.00 0.00 0.00 4.45
2516 4281 1.269778 CGTTCTGTCACTTGAGCTGGA 60.270 52.381 0.00 0.00 0.00 3.86
2517 4282 1.143305 CGTTCTGTCACTTGAGCTGG 58.857 55.000 0.00 0.00 0.00 4.85
2527 4298 3.394674 TTATGCCTGAACGTTCTGTCA 57.605 42.857 27.32 22.96 0.00 3.58
2574 4356 4.637534 CACCTGTATGATGTAAAGCTTGCT 59.362 41.667 0.00 0.00 0.00 3.91
2576 4358 4.943705 ACCACCTGTATGATGTAAAGCTTG 59.056 41.667 0.00 0.00 0.00 4.01
2729 5204 4.214437 GCGACTCAAAGTCTGAAATTGTG 58.786 43.478 5.63 4.65 42.92 3.33
2730 5205 3.251004 GGCGACTCAAAGTCTGAAATTGT 59.749 43.478 5.63 0.00 42.92 2.71
2731 5206 3.250762 TGGCGACTCAAAGTCTGAAATTG 59.749 43.478 5.63 0.00 42.92 2.32
2732 5207 3.476552 TGGCGACTCAAAGTCTGAAATT 58.523 40.909 5.63 0.00 42.92 1.82
2749 5224 2.485426 GGATACCAACATCATCATGGCG 59.515 50.000 0.00 0.00 37.77 5.69
2789 5339 1.570347 TTTTTGGTCGATGCCGGACG 61.570 55.000 5.05 7.82 36.24 4.79
2811 5363 1.228124 TTGCCGAGGTTTCCTGTGG 60.228 57.895 0.00 0.00 31.76 4.17
2813 5365 1.228154 GGTTGCCGAGGTTTCCTGT 60.228 57.895 0.00 0.00 31.76 4.00
2959 5520 0.389948 GGACGAGCAACTGGTACTGG 60.390 60.000 0.00 0.00 0.00 4.00
2960 5521 0.389948 GGGACGAGCAACTGGTACTG 60.390 60.000 0.00 0.00 0.00 2.74
2962 5523 0.108756 GAGGGACGAGCAACTGGTAC 60.109 60.000 0.00 0.00 0.00 3.34
2964 5525 1.534235 AGAGGGACGAGCAACTGGT 60.534 57.895 0.00 0.00 0.00 4.00
2966 5527 0.389166 GTCAGAGGGACGAGCAACTG 60.389 60.000 0.00 0.00 36.65 3.16
2967 5528 1.968310 GTCAGAGGGACGAGCAACT 59.032 57.895 0.00 0.00 36.65 3.16
3068 5629 0.250684 TTGCCGGACTTCTGCATCAA 60.251 50.000 5.05 0.00 34.51 2.57
3088 5649 2.289694 GGACTGCATCTTGTGGTACAGT 60.290 50.000 0.00 0.00 41.80 3.55
3152 5713 2.764314 CGCCGGCTTTGAATCCCTG 61.764 63.158 26.68 0.00 0.00 4.45
3277 5840 5.184671 AGTTTCTTTGAAATCTGGAGATGCC 59.815 40.000 0.00 0.00 34.49 4.40
3289 5852 5.018539 TCTCCGAGTCAGTTTCTTTGAAA 57.981 39.130 0.00 0.00 0.00 2.69
3294 5857 4.939052 TTTCTCTCCGAGTCAGTTTCTT 57.061 40.909 0.00 0.00 0.00 2.52
3310 5873 0.254178 TGGAGCCTCCTGCATTTCTC 59.746 55.000 12.94 0.00 44.83 2.87
3375 5938 0.323957 ACGGCCTCCTTCAGGTTTAC 59.676 55.000 0.00 0.00 45.61 2.01
3376 5939 0.323629 CACGGCCTCCTTCAGGTTTA 59.676 55.000 0.00 0.00 45.61 2.01
3377 5940 1.073199 CACGGCCTCCTTCAGGTTT 59.927 57.895 0.00 0.00 45.61 3.27
3539 6102 1.818674 AGCCCAACAACGAATCCAATC 59.181 47.619 0.00 0.00 0.00 2.67
3603 6166 6.477053 CAGAGAATCCTGGATAACTCTGAA 57.523 41.667 37.33 7.24 45.20 3.02
3641 6204 3.070734 AGACAGACACTGATGTTGCTTCT 59.929 43.478 5.76 0.00 39.95 2.85
3653 6216 3.829026 TCATCTGCAAGTAGACAGACACT 59.171 43.478 0.00 0.00 45.19 3.55
3654 6217 4.179926 TCATCTGCAAGTAGACAGACAC 57.820 45.455 0.00 0.00 45.19 3.67
3666 6229 6.534475 AGCAGGAAAAATTATCATCTGCAA 57.466 33.333 17.06 0.00 45.76 4.08
3722 6285 6.164876 AGTCATTGAAGTGAGACTGAATGAG 58.835 40.000 9.90 0.00 37.98 2.90
3738 6301 6.158598 GCAAAGGCAATTTCTTAGTCATTGA 58.841 36.000 9.27 0.00 40.72 2.57
3849 6412 5.412594 TGAACTGCTACCAAATGATCTTGAC 59.587 40.000 0.00 0.00 0.00 3.18
3877 6440 3.533105 TCGGGCACGACACTGTGT 61.533 61.111 7.15 14.23 45.59 3.72
3889 6458 1.253100 TCAGGGAATTGTTTTCGGGC 58.747 50.000 0.00 0.00 0.00 6.13
3904 6473 6.874288 ACAGAAGAATTTTCAGAGTTCAGG 57.126 37.500 0.00 0.00 0.00 3.86
4192 6765 3.490759 CATGTGGTGAGCGCGACC 61.491 66.667 21.08 21.08 0.00 4.79
4207 6780 0.984230 ACATGAAGACGGTGGACCAT 59.016 50.000 0.00 0.00 35.14 3.55
4254 6834 6.042093 TGGCCCATTACAAAATTGAACTGTTA 59.958 34.615 0.00 0.00 0.00 2.41
4287 6867 6.037172 CACTTTACAAATGGAATCTACGGGAG 59.963 42.308 0.00 0.00 0.00 4.30
4389 6977 5.431765 ACAGGCTGAAAATGGACTAGTATG 58.568 41.667 23.66 0.00 0.00 2.39
4395 6983 1.707427 AGGACAGGCTGAAAATGGACT 59.293 47.619 23.66 4.07 0.00 3.85
4506 7094 8.706322 ATCTGGGTCAAATTAAGTGTTAGTTT 57.294 30.769 0.00 0.00 0.00 2.66
4507 7095 8.706322 AATCTGGGTCAAATTAAGTGTTAGTT 57.294 30.769 0.00 0.00 0.00 2.24
4610 7209 2.239402 GGGGATTAAGTAACCGGTGGAA 59.761 50.000 8.52 0.00 0.00 3.53
4612 7211 1.134007 GGGGGATTAAGTAACCGGTGG 60.134 57.143 8.52 0.00 0.00 4.61
4614 7213 1.841919 CAGGGGGATTAAGTAACCGGT 59.158 52.381 0.00 0.00 0.00 5.28
4616 7215 1.808891 CGCAGGGGGATTAAGTAACCG 60.809 57.143 0.00 0.00 0.00 4.44
4636 7265 3.003480 CGGAACCAGAATTCAGAAGTCC 58.997 50.000 8.44 6.67 0.00 3.85
4647 7276 1.593196 CAAAGTCTGCGGAACCAGAA 58.407 50.000 0.00 0.00 42.98 3.02
4656 7294 2.154462 ACTGGAATTCCAAAGTCTGCG 58.846 47.619 26.87 15.25 46.97 5.18
4665 7303 4.782691 TCCATGAAGTAGACTGGAATTCCA 59.217 41.667 25.53 25.53 45.30 3.53
4666 7304 5.359194 TCCATGAAGTAGACTGGAATTCC 57.641 43.478 18.17 18.17 34.91 3.01
4708 7346 9.982651 GTTTGTCTATGCTCTTTCCATATACTA 57.017 33.333 0.00 0.00 0.00 1.82
4709 7347 8.486210 TGTTTGTCTATGCTCTTTCCATATACT 58.514 33.333 0.00 0.00 0.00 2.12
4710 7348 8.662781 TGTTTGTCTATGCTCTTTCCATATAC 57.337 34.615 0.00 0.00 0.00 1.47
4732 7373 0.475906 GCAGAGCCAGGGGATATGTT 59.524 55.000 0.00 0.00 32.49 2.71
4734 7375 0.036448 CTGCAGAGCCAGGGGATATG 59.964 60.000 8.42 0.00 33.09 1.78
4922 7563 2.813061 AGTGCAAATGTTGTTGTCTGC 58.187 42.857 0.00 0.00 0.00 4.26
4944 7585 3.054802 CAGTTGATCCCTTTGGTAGCTCT 60.055 47.826 0.00 0.00 0.00 4.09
4980 7621 2.868583 CCTTTGCGATGACTATCACCTG 59.131 50.000 0.00 0.00 32.67 4.00
4982 7623 1.599542 GCCTTTGCGATGACTATCACC 59.400 52.381 0.00 0.00 32.67 4.02
5000 7641 4.379302 AGAGATTTTGATATCCCCAGCC 57.621 45.455 0.00 0.00 0.00 4.85
5024 7665 3.688272 AGAGATGCGCGATTTGATTTTG 58.312 40.909 12.10 0.00 0.00 2.44
5030 7671 2.097007 GCTTCTAGAGATGCGCGATTTG 60.097 50.000 12.10 0.00 35.89 2.32
5036 7677 1.066908 ACAGAGCTTCTAGAGATGCGC 59.933 52.381 0.00 0.00 46.13 6.09
5037 7678 3.435105 AACAGAGCTTCTAGAGATGCG 57.565 47.619 10.69 1.89 46.13 4.73
5041 7682 4.317530 TGGGTAACAGAGCTTCTAGAGA 57.682 45.455 0.00 0.00 39.74 3.10
5059 7700 2.436646 CAGGCGGCTACAACTGGG 60.437 66.667 12.74 0.00 0.00 4.45
5174 7815 2.110901 AGGCAAGAGAGCAGATGTTG 57.889 50.000 0.00 0.00 35.83 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.