Multiple sequence alignment - TraesCS5D01G360200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G360200 chr5D 100.000 5150 0 0 1 5150 439794498 439789349 0.000000e+00 9511.0
1 TraesCS5D01G360200 chr5B 95.598 2976 116 8 874 3834 534918080 534915105 0.000000e+00 4756.0
2 TraesCS5D01G360200 chr5B 87.824 1544 183 5 1163 2704 534862386 534860846 0.000000e+00 1805.0
3 TraesCS5D01G360200 chr5B 88.141 877 67 21 3830 4678 534914959 534914092 0.000000e+00 1009.0
4 TraesCS5D01G360200 chr5B 83.719 995 129 15 2856 3834 534860707 534859730 0.000000e+00 909.0
5 TraesCS5D01G360200 chr5B 87.083 689 48 16 156 841 534918726 534918076 0.000000e+00 741.0
6 TraesCS5D01G360200 chr5B 92.500 440 30 2 4712 5150 680927238 680927675 1.220000e-175 627.0
7 TraesCS5D01G360200 chr5B 91.463 164 11 1 1 161 534919178 534919015 6.710000e-54 222.0
8 TraesCS5D01G360200 chr5B 84.722 72 6 5 4242 4311 37891840 37891772 3.330000e-07 67.6
9 TraesCS5D01G360200 chrUn 95.480 2655 105 6 1192 3834 80087870 80090521 0.000000e+00 4224.0
10 TraesCS5D01G360200 chrUn 97.136 1711 41 5 1 1710 325201416 325203119 0.000000e+00 2881.0
11 TraesCS5D01G360200 chrUn 93.973 1626 86 5 2221 3834 376485072 376486697 0.000000e+00 2449.0
12 TraesCS5D01G360200 chrUn 97.872 1128 24 0 1712 2839 436077349 436078476 0.000000e+00 1951.0
13 TraesCS5D01G360200 chrUn 87.485 1678 203 7 1163 2837 80135707 80137380 0.000000e+00 1929.0
14 TraesCS5D01G360200 chrUn 88.120 867 58 12 3830 4672 363761844 363762689 0.000000e+00 989.0
15 TraesCS5D01G360200 chrUn 88.601 772 56 7 3925 4672 80091027 80091790 0.000000e+00 909.0
16 TraesCS5D01G360200 chrUn 83.618 995 130 15 2856 3834 223958630 223957653 0.000000e+00 904.0
17 TraesCS5D01G360200 chrUn 83.534 996 129 20 2856 3834 80137468 80138445 0.000000e+00 898.0
18 TraesCS5D01G360200 chrUn 95.146 103 5 0 3830 3932 80090667 80090769 4.130000e-36 163.0
19 TraesCS5D01G360200 chr1B 83.317 3135 444 49 732 3820 24163623 24160522 0.000000e+00 2819.0
20 TraesCS5D01G360200 chr1B 82.213 3199 478 48 675 3821 22844135 22840976 0.000000e+00 2671.0
21 TraesCS5D01G360200 chr1B 84.409 2463 343 22 672 3116 24152807 24150368 0.000000e+00 2383.0
22 TraesCS5D01G360200 chr1B 82.071 2694 391 52 673 3297 22887450 22884780 0.000000e+00 2215.0
23 TraesCS5D01G360200 chr1B 82.003 689 107 12 3145 3820 24145299 24144615 2.080000e-158 569.0
24 TraesCS5D01G360200 chr1B 82.018 228 35 4 3831 4057 24144453 24144231 6.810000e-44 189.0
25 TraesCS5D01G360200 chr1D 84.244 2380 314 35 1475 3820 15293683 15296035 0.000000e+00 2261.0
26 TraesCS5D01G360200 chr1D 92.500 440 30 2 4712 5150 406828835 406828398 1.220000e-175 627.0
27 TraesCS5D01G360200 chr1D 92.500 440 30 2 4712 5150 475277376 475277813 1.220000e-175 627.0
28 TraesCS5D01G360200 chr4A 82.895 1900 292 24 689 2567 743448586 743446699 0.000000e+00 1677.0
29 TraesCS5D01G360200 chr4A 81.697 1202 188 15 2543 3722 743446692 743445501 0.000000e+00 972.0
30 TraesCS5D01G360200 chr6A 83.641 1785 252 24 1213 2979 570740852 570742614 0.000000e+00 1642.0
31 TraesCS5D01G360200 chr7A 81.910 1288 192 20 2571 3832 654345 653073 0.000000e+00 1050.0
32 TraesCS5D01G360200 chr7A 92.063 63 4 1 508 570 649820304 649820365 2.550000e-13 87.9
33 TraesCS5D01G360200 chr4D 93.409 440 25 2 4712 5150 47729343 47728907 0.000000e+00 649.0
34 TraesCS5D01G360200 chr6D 92.500 440 30 2 4712 5150 14615530 14615967 1.220000e-175 627.0
35 TraesCS5D01G360200 chr6D 92.661 436 27 4 4717 5150 464465369 464465801 1.570000e-174 623.0
36 TraesCS5D01G360200 chr7B 92.273 440 31 2 4712 5150 138474841 138475278 5.660000e-174 621.0
37 TraesCS5D01G360200 chr7B 90.476 63 5 1 508 570 614399837 614399898 1.190000e-11 82.4
38 TraesCS5D01G360200 chr3B 91.946 447 30 3 4708 5150 59705333 59704889 5.660000e-174 621.0
39 TraesCS5D01G360200 chr3B 91.910 445 33 3 4708 5150 2501160 2501603 2.040000e-173 619.0
40 TraesCS5D01G360200 chr7D 74.815 270 56 10 4242 4505 12636948 12637211 1.520000e-20 111.0
41 TraesCS5D01G360200 chr7D 74.349 269 59 10 4242 4505 12617041 12617304 7.050000e-19 106.0
42 TraesCS5D01G360200 chr7D 74.349 269 59 9 4242 4505 12626796 12627059 7.050000e-19 106.0
43 TraesCS5D01G360200 chr7D 75.000 236 51 7 4242 4472 12642013 12642245 9.120000e-18 102.0
44 TraesCS5D01G360200 chr7D 73.234 269 62 9 4242 4504 12603068 12603332 7.100000e-14 89.8
45 TraesCS5D01G360200 chr2B 89.362 47 4 1 4193 4239 611017635 611017680 2.000000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G360200 chr5D 439789349 439794498 5149 True 9511.000000 9511 100.000000 1 5150 1 chr5D.!!$R1 5149
1 TraesCS5D01G360200 chr5B 534914092 534919178 5086 True 1682.000000 4756 90.571250 1 4678 4 chr5B.!!$R3 4677
2 TraesCS5D01G360200 chr5B 534859730 534862386 2656 True 1357.000000 1805 85.771500 1163 3834 2 chr5B.!!$R2 2671
3 TraesCS5D01G360200 chrUn 325201416 325203119 1703 False 2881.000000 2881 97.136000 1 1710 1 chrUn.!!$F1 1709
4 TraesCS5D01G360200 chrUn 376485072 376486697 1625 False 2449.000000 2449 93.973000 2221 3834 1 chrUn.!!$F3 1613
5 TraesCS5D01G360200 chrUn 436077349 436078476 1127 False 1951.000000 1951 97.872000 1712 2839 1 chrUn.!!$F4 1127
6 TraesCS5D01G360200 chrUn 80087870 80091790 3920 False 1765.333333 4224 93.075667 1192 4672 3 chrUn.!!$F5 3480
7 TraesCS5D01G360200 chrUn 80135707 80138445 2738 False 1413.500000 1929 85.509500 1163 3834 2 chrUn.!!$F6 2671
8 TraesCS5D01G360200 chrUn 363761844 363762689 845 False 989.000000 989 88.120000 3830 4672 1 chrUn.!!$F2 842
9 TraesCS5D01G360200 chrUn 223957653 223958630 977 True 904.000000 904 83.618000 2856 3834 1 chrUn.!!$R1 978
10 TraesCS5D01G360200 chr1B 24160522 24163623 3101 True 2819.000000 2819 83.317000 732 3820 1 chr1B.!!$R4 3088
11 TraesCS5D01G360200 chr1B 22840976 22844135 3159 True 2671.000000 2671 82.213000 675 3821 1 chr1B.!!$R1 3146
12 TraesCS5D01G360200 chr1B 24150368 24152807 2439 True 2383.000000 2383 84.409000 672 3116 1 chr1B.!!$R3 2444
13 TraesCS5D01G360200 chr1B 22884780 22887450 2670 True 2215.000000 2215 82.071000 673 3297 1 chr1B.!!$R2 2624
14 TraesCS5D01G360200 chr1B 24144231 24145299 1068 True 379.000000 569 82.010500 3145 4057 2 chr1B.!!$R5 912
15 TraesCS5D01G360200 chr1D 15293683 15296035 2352 False 2261.000000 2261 84.244000 1475 3820 1 chr1D.!!$F1 2345
16 TraesCS5D01G360200 chr4A 743445501 743448586 3085 True 1324.500000 1677 82.296000 689 3722 2 chr4A.!!$R1 3033
17 TraesCS5D01G360200 chr6A 570740852 570742614 1762 False 1642.000000 1642 83.641000 1213 2979 1 chr6A.!!$F1 1766
18 TraesCS5D01G360200 chr7A 653073 654345 1272 True 1050.000000 1050 81.910000 2571 3832 1 chr7A.!!$R1 1261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 678 0.976641 CCAGAGAGGGCACAAGTGTA 59.023 55.000 1.79 0.0 0.00 2.90 F
381 679 1.556911 CCAGAGAGGGCACAAGTGTAT 59.443 52.381 1.79 0.0 0.00 2.29 F
994 1328 2.684374 AGCATATGATTTCAACAGCGCA 59.316 40.909 11.47 0.0 0.00 6.09 F
2358 2746 0.390866 AGACTGACATTCTGCCAGCG 60.391 55.000 0.00 0.0 30.52 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2061 2428 0.530870 CTAGCTTAGCAACCTCGGGC 60.531 60.000 7.07 0.0 0.00 6.13 R
2165 2539 2.100584 TCCATGTTGTTGCACAAAGTCC 59.899 45.455 3.74 0.0 40.15 3.85 R
2804 3224 1.806542 CCTTGAACCAACAGTCCATCG 59.193 52.381 0.00 0.0 0.00 3.84 R
4207 5313 0.657312 TGCATCATCGCCGTTTCATC 59.343 50.000 0.00 0.0 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 554 2.890808 TTTGGATAGCCTACTCGCTG 57.109 50.000 0.00 0.00 40.08 5.18
270 568 1.658095 CTCGCTGAAGCTAAGCACTTC 59.342 52.381 18.48 0.00 43.15 3.01
378 676 4.709840 CCAGAGAGGGCACAAGTG 57.290 61.111 0.00 0.00 0.00 3.16
379 677 1.757306 CCAGAGAGGGCACAAGTGT 59.243 57.895 1.79 0.00 0.00 3.55
380 678 0.976641 CCAGAGAGGGCACAAGTGTA 59.023 55.000 1.79 0.00 0.00 2.90
381 679 1.556911 CCAGAGAGGGCACAAGTGTAT 59.443 52.381 1.79 0.00 0.00 2.29
451 749 9.734620 TTGTTTTTAATCTATATGATGCAGTGC 57.265 29.630 8.58 8.58 35.21 4.40
727 1028 3.751175 TGATGAGTTTGCCCTTAAAGACG 59.249 43.478 0.00 0.00 0.00 4.18
817 1142 6.046290 TCAGTCATGATTTCACTCACTGAT 57.954 37.500 0.00 0.00 0.00 2.90
898 1223 9.209175 CAGCAAATATAGAAGGTAGTTACATCC 57.791 37.037 0.00 0.00 0.00 3.51
971 1305 9.926751 CGTACTCTTCGAACTAAGATTTATGTA 57.073 33.333 0.00 0.00 35.04 2.29
994 1328 2.684374 AGCATATGATTTCAACAGCGCA 59.316 40.909 11.47 0.00 0.00 6.09
1035 1369 7.620600 GCTTTGGCAATATTCAATGAATATGCG 60.621 37.037 24.23 19.49 42.29 4.73
1410 1745 3.458189 GCTAGACCAATTGCGTGATACT 58.542 45.455 0.00 0.00 0.00 2.12
1623 1976 6.273071 CCGTGAAAAAGAAATGAAGGAGTTT 58.727 36.000 0.00 0.00 0.00 2.66
1687 2043 3.243839 TGAAAGCAAAGCAAGAATGACCC 60.244 43.478 0.00 0.00 0.00 4.46
1713 2069 2.807392 GCATGTGTTTTCCATTGTTGGG 59.193 45.455 0.00 0.00 43.81 4.12
1752 2108 2.825532 GACAACTATGGCCCAACACATT 59.174 45.455 0.00 0.00 0.00 2.71
2061 2428 3.871594 GGATTTTGGTCACCACTAGATCG 59.128 47.826 0.00 0.00 30.78 3.69
2165 2539 4.730949 AATTCTGTGCATTTGGATCCAG 57.269 40.909 15.53 4.71 0.00 3.86
2358 2746 0.390866 AGACTGACATTCTGCCAGCG 60.391 55.000 0.00 0.00 30.52 5.18
2553 2941 2.217847 TCGTTCGTTCTTTCAGAAAGCG 59.782 45.455 17.04 15.21 35.75 4.68
2700 3120 5.463392 CCGTCATCTGTCAATATTCACGAAT 59.537 40.000 0.00 0.00 34.93 3.34
2963 3452 6.003326 TCAGCACATTTCCTTCATCAGTTTA 58.997 36.000 0.00 0.00 0.00 2.01
3006 3495 1.045407 TAGACCGTGGCAGTTCTGTT 58.955 50.000 0.00 0.00 0.00 3.16
3109 3598 1.203523 ACTCTGGCAAACTCTCGCTAG 59.796 52.381 0.00 0.00 38.02 3.42
3156 3666 3.185188 CGGCGAAGATGATGGAAGTATTG 59.815 47.826 0.00 0.00 0.00 1.90
3195 3705 8.929260 TCCATCATTTGCATGTAGAGAATTAT 57.071 30.769 0.00 0.00 0.00 1.28
3397 3913 0.247460 GCAAATCAGTTGGGAAGGCC 59.753 55.000 0.00 0.00 37.73 5.19
3441 3957 5.307196 TCTTAGAAAGCTAACCCTTGTGAGT 59.693 40.000 0.00 0.00 33.24 3.41
3511 4027 7.829211 TCACTTCCCTCACTTATTTGGAAATAG 59.171 37.037 0.00 0.00 34.85 1.73
3592 4108 8.383175 CAGCCCTGGAGGAACTATATATTAAAA 58.617 37.037 0.00 0.00 41.55 1.52
3889 4716 5.036737 CAGCAGCGGTTGATAAAATAAAGG 58.963 41.667 0.00 0.00 0.00 3.11
3944 5036 4.788100 CGAAATACAACAGCCAATCTTTCG 59.212 41.667 0.00 0.00 38.15 3.46
3945 5037 5.616866 CGAAATACAACAGCCAATCTTTCGT 60.617 40.000 0.00 0.00 39.01 3.85
3946 5038 4.946784 ATACAACAGCCAATCTTTCGTC 57.053 40.909 0.00 0.00 0.00 4.20
3990 5082 7.488322 GGGCAATTTAATTACTCTATGCACAA 58.512 34.615 0.00 0.00 36.06 3.33
4141 5234 6.729690 TTTGTCCCTTCTTTGAATCAATGT 57.270 33.333 8.43 0.00 0.00 2.71
4149 5242 7.393234 CCCTTCTTTGAATCAATGTGTAGGTAA 59.607 37.037 17.00 3.56 0.00 2.85
4150 5243 8.960591 CCTTCTTTGAATCAATGTGTAGGTAAT 58.039 33.333 8.43 0.00 0.00 1.89
4164 5257 7.700505 TGTGTAGGTAATAGATGAAGTACACG 58.299 38.462 0.00 0.00 41.13 4.49
4165 5258 7.337689 TGTGTAGGTAATAGATGAAGTACACGT 59.662 37.037 0.00 0.00 41.13 4.49
4166 5259 8.830580 GTGTAGGTAATAGATGAAGTACACGTA 58.169 37.037 0.00 0.00 32.30 3.57
4167 5260 8.830580 TGTAGGTAATAGATGAAGTACACGTAC 58.169 37.037 0.00 0.00 36.35 3.67
4178 5284 5.694458 TGAAGTACACGTACGAGTACTACAA 59.306 40.000 39.70 29.64 46.38 2.41
4207 5313 2.034685 TCGGACGAGGAGAATTATGCAG 59.965 50.000 0.00 0.00 0.00 4.41
4232 5338 2.816360 CGGCGATGATGCAGGTGTG 61.816 63.158 0.00 0.00 36.28 3.82
4239 5345 0.764271 TGATGCAGGTGTGTCCTTGA 59.236 50.000 0.00 0.00 45.67 3.02
4247 5353 3.041946 AGGTGTGTCCTTGAAGTTCTCT 58.958 45.455 4.17 0.00 45.67 3.10
4252 5358 5.529060 GTGTGTCCTTGAAGTTCTCTGATTT 59.471 40.000 4.17 0.00 0.00 2.17
4253 5359 5.760253 TGTGTCCTTGAAGTTCTCTGATTTC 59.240 40.000 4.17 0.00 0.00 2.17
4255 5361 5.994054 TGTCCTTGAAGTTCTCTGATTTCAG 59.006 40.000 4.17 0.97 45.08 3.02
4274 5380 1.974236 AGGGATCGATCAAGGGTCATC 59.026 52.381 25.93 5.91 0.00 2.92
4280 5386 1.135139 CGATCAAGGGTCATCGAGTGT 59.865 52.381 0.00 0.00 43.83 3.55
4297 5403 2.087009 GTTGAACCGGACGAGAGCG 61.087 63.158 9.46 0.00 44.79 5.03
4317 5423 0.523968 CGGCGGCATTTGATGTTGAG 60.524 55.000 10.53 0.00 0.00 3.02
4331 5437 5.491070 TGATGTTGAGGGATGACTACTTTG 58.509 41.667 0.00 0.00 0.00 2.77
4339 5445 2.418334 GGATGACTACTTTGTCCCCGAC 60.418 54.545 0.00 0.00 36.21 4.79
4348 5454 0.953471 TTGTCCCCGACGCATTCAAG 60.953 55.000 0.00 0.00 34.95 3.02
4359 5465 4.143556 CGACGCATTCAAGGACAATTTTTG 60.144 41.667 0.00 0.00 0.00 2.44
4379 5485 3.367321 TGATGGCATGTTTGGATGTGAT 58.633 40.909 3.81 0.00 0.00 3.06
4395 5501 5.276868 GGATGTGATAAAATGTCTTCGACCG 60.277 44.000 0.00 0.00 0.00 4.79
4406 5512 0.797249 CTTCGACCGCCTCTACAACG 60.797 60.000 0.00 0.00 0.00 4.10
4424 5530 0.603707 CGGCGTCCGGTCCTACTATA 60.604 60.000 0.00 0.00 44.15 1.31
4452 5558 9.221933 CTATCTCATCTTGTAGAAGTATACCGT 57.778 37.037 0.00 0.00 0.00 4.83
4504 5636 1.358877 GCACGACTGCATATGACACA 58.641 50.000 6.97 0.00 43.62 3.72
4573 5705 4.685169 AATTAGAACCACTGTCGCATTG 57.315 40.909 0.00 0.00 0.00 2.82
4637 5769 1.465856 GCTCGCGGGCTTAAGAAAAAG 60.466 52.381 26.87 0.13 0.00 2.27
4640 5772 1.804748 CGCGGGCTTAAGAAAAAGAGT 59.195 47.619 6.67 0.00 0.00 3.24
4672 5804 5.941788 ACTTAGAAGACAAAGTTGGATGGT 58.058 37.500 0.00 0.00 32.00 3.55
4673 5805 5.998363 ACTTAGAAGACAAAGTTGGATGGTC 59.002 40.000 0.00 0.00 32.00 4.02
4678 5810 1.349688 ACAAAGTTGGATGGTCGGCTA 59.650 47.619 0.00 0.00 0.00 3.93
4679 5811 2.224670 ACAAAGTTGGATGGTCGGCTAA 60.225 45.455 0.00 0.00 0.00 3.09
4680 5812 2.817258 CAAAGTTGGATGGTCGGCTAAA 59.183 45.455 0.00 0.00 0.00 1.85
4681 5813 2.109425 AGTTGGATGGTCGGCTAAAC 57.891 50.000 0.00 0.00 0.00 2.01
4682 5814 0.725117 GTTGGATGGTCGGCTAAACG 59.275 55.000 0.00 0.00 0.00 3.60
4683 5815 0.609151 TTGGATGGTCGGCTAAACGA 59.391 50.000 0.00 0.00 41.13 3.85
4684 5816 0.609151 TGGATGGTCGGCTAAACGAA 59.391 50.000 0.00 0.00 45.38 3.85
4685 5817 1.002201 TGGATGGTCGGCTAAACGAAA 59.998 47.619 0.00 0.00 45.38 3.46
4686 5818 1.664151 GGATGGTCGGCTAAACGAAAG 59.336 52.381 0.00 0.00 45.38 2.62
4700 5832 3.088194 ACGAAAGTTGAAGCAGTACGA 57.912 42.857 0.00 0.00 46.40 3.43
4701 5833 3.050619 ACGAAAGTTGAAGCAGTACGAG 58.949 45.455 0.00 0.00 46.40 4.18
4702 5834 2.159960 CGAAAGTTGAAGCAGTACGAGC 60.160 50.000 5.35 5.35 0.00 5.03
4703 5835 2.526304 AAGTTGAAGCAGTACGAGCA 57.474 45.000 14.36 0.00 0.00 4.26
4704 5836 2.526304 AGTTGAAGCAGTACGAGCAA 57.474 45.000 14.36 1.82 0.00 3.91
4705 5837 2.135933 AGTTGAAGCAGTACGAGCAAC 58.864 47.619 14.36 12.05 36.72 4.17
4706 5838 1.194772 GTTGAAGCAGTACGAGCAACC 59.805 52.381 14.36 4.96 31.90 3.77
4707 5839 0.666274 TGAAGCAGTACGAGCAACCG 60.666 55.000 14.36 0.00 0.00 4.44
4708 5840 0.666577 GAAGCAGTACGAGCAACCGT 60.667 55.000 14.36 4.39 45.54 4.83
4709 5841 0.666577 AAGCAGTACGAGCAACCGTC 60.667 55.000 14.36 0.00 43.20 4.79
4710 5842 2.434134 GCAGTACGAGCAACCGTCG 61.434 63.158 8.24 0.00 43.20 5.12
4711 5843 2.126580 AGTACGAGCAACCGTCGC 60.127 61.111 2.21 0.00 43.20 5.19
4712 5844 2.126580 GTACGAGCAACCGTCGCT 60.127 61.111 2.21 0.00 43.20 4.93
4717 5849 4.070552 AGCAACCGTCGCTCCTCC 62.071 66.667 0.00 0.00 33.35 4.30
4718 5850 4.070552 GCAACCGTCGCTCCTCCT 62.071 66.667 0.00 0.00 0.00 3.69
4719 5851 2.182030 CAACCGTCGCTCCTCCTC 59.818 66.667 0.00 0.00 0.00 3.71
4720 5852 3.069318 AACCGTCGCTCCTCCTCC 61.069 66.667 0.00 0.00 0.00 4.30
4721 5853 3.881019 AACCGTCGCTCCTCCTCCA 62.881 63.158 0.00 0.00 0.00 3.86
4722 5854 3.068691 CCGTCGCTCCTCCTCCAA 61.069 66.667 0.00 0.00 0.00 3.53
4723 5855 2.492090 CGTCGCTCCTCCTCCAAG 59.508 66.667 0.00 0.00 0.00 3.61
4724 5856 2.046864 CGTCGCTCCTCCTCCAAGA 61.047 63.158 0.00 0.00 0.00 3.02
4725 5857 1.595993 CGTCGCTCCTCCTCCAAGAA 61.596 60.000 0.00 0.00 0.00 2.52
4726 5858 0.608640 GTCGCTCCTCCTCCAAGAAA 59.391 55.000 0.00 0.00 0.00 2.52
4727 5859 0.898320 TCGCTCCTCCTCCAAGAAAG 59.102 55.000 0.00 0.00 0.00 2.62
4728 5860 0.898320 CGCTCCTCCTCCAAGAAAGA 59.102 55.000 0.00 0.00 0.00 2.52
4729 5861 1.276421 CGCTCCTCCTCCAAGAAAGAA 59.724 52.381 0.00 0.00 0.00 2.52
4730 5862 2.289694 CGCTCCTCCTCCAAGAAAGAAA 60.290 50.000 0.00 0.00 0.00 2.52
4731 5863 3.342719 GCTCCTCCTCCAAGAAAGAAAG 58.657 50.000 0.00 0.00 0.00 2.62
4732 5864 3.244735 GCTCCTCCTCCAAGAAAGAAAGT 60.245 47.826 0.00 0.00 0.00 2.66
4733 5865 4.748239 GCTCCTCCTCCAAGAAAGAAAGTT 60.748 45.833 0.00 0.00 0.00 2.66
4734 5866 5.513267 GCTCCTCCTCCAAGAAAGAAAGTTA 60.513 44.000 0.00 0.00 0.00 2.24
4735 5867 6.115448 TCCTCCTCCAAGAAAGAAAGTTAG 57.885 41.667 0.00 0.00 0.00 2.34
4736 5868 5.013183 TCCTCCTCCAAGAAAGAAAGTTAGG 59.987 44.000 0.00 0.00 0.00 2.69
4737 5869 5.242795 TCCTCCAAGAAAGAAAGTTAGGG 57.757 43.478 0.00 0.00 0.00 3.53
4738 5870 4.663592 TCCTCCAAGAAAGAAAGTTAGGGT 59.336 41.667 0.00 0.00 0.00 4.34
4739 5871 5.133830 TCCTCCAAGAAAGAAAGTTAGGGTT 59.866 40.000 0.00 0.00 0.00 4.11
4740 5872 5.473846 CCTCCAAGAAAGAAAGTTAGGGTTC 59.526 44.000 0.00 0.00 0.00 3.62
4741 5873 5.382616 TCCAAGAAAGAAAGTTAGGGTTCC 58.617 41.667 0.00 0.00 0.00 3.62
4742 5874 5.133830 TCCAAGAAAGAAAGTTAGGGTTCCT 59.866 40.000 0.00 0.00 37.71 3.36
4743 5875 5.241728 CCAAGAAAGAAAGTTAGGGTTCCTG 59.758 44.000 0.00 0.00 34.61 3.86
4744 5876 4.399219 AGAAAGAAAGTTAGGGTTCCTGC 58.601 43.478 0.00 0.00 34.61 4.85
4745 5877 2.881111 AGAAAGTTAGGGTTCCTGCC 57.119 50.000 0.00 0.00 34.61 4.85
4746 5878 2.349445 AGAAAGTTAGGGTTCCTGCCT 58.651 47.619 0.00 0.00 34.61 4.75
4747 5879 2.306219 AGAAAGTTAGGGTTCCTGCCTC 59.694 50.000 0.00 0.00 34.61 4.70
4748 5880 2.046280 AAGTTAGGGTTCCTGCCTCT 57.954 50.000 0.00 0.00 34.61 3.69
4749 5881 1.574263 AGTTAGGGTTCCTGCCTCTC 58.426 55.000 0.00 0.00 34.61 3.20
4750 5882 0.175989 GTTAGGGTTCCTGCCTCTCG 59.824 60.000 0.00 0.00 34.61 4.04
4751 5883 1.614241 TTAGGGTTCCTGCCTCTCGC 61.614 60.000 0.00 0.00 34.61 5.03
4752 5884 4.475135 GGGTTCCTGCCTCTCGCC 62.475 72.222 0.00 0.00 36.24 5.54
4753 5885 4.821589 GGTTCCTGCCTCTCGCCG 62.822 72.222 0.00 0.00 36.24 6.46
4754 5886 4.821589 GTTCCTGCCTCTCGCCGG 62.822 72.222 0.00 0.00 43.00 6.13
4774 5906 4.767255 CGGCTGCAGGTCCACCTC 62.767 72.222 17.12 0.00 46.65 3.85
4775 5907 4.767255 GGCTGCAGGTCCACCTCG 62.767 72.222 17.12 0.00 46.65 4.63
4776 5908 4.008933 GCTGCAGGTCCACCTCGT 62.009 66.667 17.12 0.00 46.65 4.18
4777 5909 2.262915 CTGCAGGTCCACCTCGTC 59.737 66.667 5.57 0.00 46.65 4.20
4778 5910 2.203640 TGCAGGTCCACCTCGTCT 60.204 61.111 0.00 0.00 46.65 4.18
4779 5911 2.219325 CTGCAGGTCCACCTCGTCTC 62.219 65.000 5.57 0.00 46.65 3.36
4780 5912 3.007973 GCAGGTCCACCTCGTCTCC 62.008 68.421 0.00 0.00 46.65 3.71
4781 5913 2.361357 AGGTCCACCTCGTCTCCG 60.361 66.667 0.00 0.00 44.77 4.63
4782 5914 3.450115 GGTCCACCTCGTCTCCGG 61.450 72.222 0.00 0.00 33.95 5.14
4783 5915 2.675772 GTCCACCTCGTCTCCGGT 60.676 66.667 0.00 0.00 33.95 5.28
4786 5918 4.436998 CACCTCGTCTCCGGTGGC 62.437 72.222 0.00 0.00 45.39 5.01
4791 5923 4.760047 CGTCTCCGGTGGCCCTTG 62.760 72.222 0.00 0.00 0.00 3.61
4792 5924 4.410400 GTCTCCGGTGGCCCTTGG 62.410 72.222 0.00 0.00 0.00 3.61
4802 5934 4.847367 GCCCTTGGGCCATGGAGG 62.847 72.222 33.75 24.68 41.84 4.30
4812 5944 4.552365 CATGGAGGCGCGGTGGAT 62.552 66.667 8.83 0.00 0.00 3.41
4813 5945 4.241555 ATGGAGGCGCGGTGGATC 62.242 66.667 8.83 0.00 0.00 3.36
4816 5948 4.899239 GAGGCGCGGTGGATCCTG 62.899 72.222 14.23 4.04 0.00 3.86
4820 5952 4.776322 CGCGGTGGATCCTGGCAA 62.776 66.667 14.23 0.00 0.00 4.52
4821 5953 2.825836 GCGGTGGATCCTGGCAAG 60.826 66.667 14.23 0.00 0.00 4.01
4822 5954 2.124570 CGGTGGATCCTGGCAAGG 60.125 66.667 14.23 0.00 46.06 3.61
4823 5955 2.276740 GGTGGATCCTGGCAAGGG 59.723 66.667 14.23 0.00 44.62 3.95
4824 5956 2.616458 GGTGGATCCTGGCAAGGGT 61.616 63.158 14.23 0.00 44.62 4.34
4825 5957 1.379044 GTGGATCCTGGCAAGGGTG 60.379 63.158 14.23 0.00 44.62 4.61
4826 5958 2.276740 GGATCCTGGCAAGGGTGG 59.723 66.667 7.48 0.00 44.62 4.61
4847 5979 3.950869 GGAGGGCTCCGTTTTTAGT 57.049 52.632 0.00 0.00 40.36 2.24
4848 5980 1.735386 GGAGGGCTCCGTTTTTAGTC 58.265 55.000 0.00 0.00 40.36 2.59
4849 5981 1.002773 GGAGGGCTCCGTTTTTAGTCA 59.997 52.381 0.00 0.00 40.36 3.41
4850 5982 2.355818 GGAGGGCTCCGTTTTTAGTCAT 60.356 50.000 0.00 0.00 40.36 3.06
4851 5983 3.344515 GAGGGCTCCGTTTTTAGTCATT 58.655 45.455 0.00 0.00 0.00 2.57
4852 5984 3.756963 GAGGGCTCCGTTTTTAGTCATTT 59.243 43.478 0.00 0.00 0.00 2.32
4853 5985 4.149598 AGGGCTCCGTTTTTAGTCATTTT 58.850 39.130 0.00 0.00 0.00 1.82
4854 5986 4.587262 AGGGCTCCGTTTTTAGTCATTTTT 59.413 37.500 0.00 0.00 0.00 1.94
4877 6009 6.783708 TTTTTCTGTCATGTTAGGGTTTGT 57.216 33.333 0.00 0.00 0.00 2.83
4878 6010 5.766150 TTTCTGTCATGTTAGGGTTTGTG 57.234 39.130 0.00 0.00 0.00 3.33
4879 6011 4.431416 TCTGTCATGTTAGGGTTTGTGT 57.569 40.909 0.00 0.00 0.00 3.72
4880 6012 4.787551 TCTGTCATGTTAGGGTTTGTGTT 58.212 39.130 0.00 0.00 0.00 3.32
4881 6013 4.819630 TCTGTCATGTTAGGGTTTGTGTTC 59.180 41.667 0.00 0.00 0.00 3.18
4882 6014 4.787551 TGTCATGTTAGGGTTTGTGTTCT 58.212 39.130 0.00 0.00 0.00 3.01
4883 6015 4.578516 TGTCATGTTAGGGTTTGTGTTCTG 59.421 41.667 0.00 0.00 0.00 3.02
4884 6016 3.568007 TCATGTTAGGGTTTGTGTTCTGC 59.432 43.478 0.00 0.00 0.00 4.26
4885 6017 3.290948 TGTTAGGGTTTGTGTTCTGCT 57.709 42.857 0.00 0.00 0.00 4.24
4886 6018 3.211045 TGTTAGGGTTTGTGTTCTGCTC 58.789 45.455 0.00 0.00 0.00 4.26
4887 6019 3.211045 GTTAGGGTTTGTGTTCTGCTCA 58.789 45.455 0.00 0.00 0.00 4.26
4888 6020 1.972872 AGGGTTTGTGTTCTGCTCAG 58.027 50.000 0.00 0.00 0.00 3.35
4889 6021 0.954452 GGGTTTGTGTTCTGCTCAGG 59.046 55.000 0.00 0.00 0.00 3.86
4890 6022 1.476833 GGGTTTGTGTTCTGCTCAGGA 60.477 52.381 0.00 0.00 0.00 3.86
4891 6023 2.297701 GGTTTGTGTTCTGCTCAGGAA 58.702 47.619 0.00 0.00 0.00 3.36
4892 6024 2.291741 GGTTTGTGTTCTGCTCAGGAAG 59.708 50.000 0.00 0.00 0.00 3.46
4893 6025 2.260844 TTGTGTTCTGCTCAGGAAGG 57.739 50.000 0.00 0.00 0.00 3.46
4894 6026 0.250467 TGTGTTCTGCTCAGGAAGGC 60.250 55.000 0.00 0.00 0.00 4.35
4895 6027 1.004560 TGTTCTGCTCAGGAAGGCG 60.005 57.895 0.00 0.00 0.00 5.52
4896 6028 1.293498 GTTCTGCTCAGGAAGGCGA 59.707 57.895 0.00 0.00 0.00 5.54
4897 6029 0.739112 GTTCTGCTCAGGAAGGCGAG 60.739 60.000 0.00 0.00 0.00 5.03
4898 6030 0.900182 TTCTGCTCAGGAAGGCGAGA 60.900 55.000 0.00 0.00 0.00 4.04
4899 6031 1.153667 CTGCTCAGGAAGGCGAGAC 60.154 63.158 0.00 0.00 0.00 3.36
4900 6032 2.202676 GCTCAGGAAGGCGAGACG 60.203 66.667 0.00 0.00 0.00 4.18
4901 6033 2.492090 CTCAGGAAGGCGAGACGG 59.508 66.667 0.00 0.00 0.00 4.79
4919 6051 3.854669 CGGCGGCTCCCTGAAGAT 61.855 66.667 7.61 0.00 0.00 2.40
4920 6052 2.203126 GGCGGCTCCCTGAAGATG 60.203 66.667 0.00 0.00 0.00 2.90
4921 6053 2.203126 GCGGCTCCCTGAAGATGG 60.203 66.667 0.00 0.00 0.00 3.51
4922 6054 2.735772 GCGGCTCCCTGAAGATGGA 61.736 63.158 0.00 0.00 0.00 3.41
4923 6055 1.907739 CGGCTCCCTGAAGATGGAA 59.092 57.895 0.00 0.00 0.00 3.53
4924 6056 0.471617 CGGCTCCCTGAAGATGGAAT 59.528 55.000 0.00 0.00 0.00 3.01
4925 6057 1.694150 CGGCTCCCTGAAGATGGAATA 59.306 52.381 0.00 0.00 0.00 1.75
4926 6058 2.104792 CGGCTCCCTGAAGATGGAATAA 59.895 50.000 0.00 0.00 0.00 1.40
4927 6059 3.433598 CGGCTCCCTGAAGATGGAATAAA 60.434 47.826 0.00 0.00 0.00 1.40
4928 6060 4.140536 GGCTCCCTGAAGATGGAATAAAG 58.859 47.826 0.00 0.00 0.00 1.85
4929 6061 4.140536 GCTCCCTGAAGATGGAATAAAGG 58.859 47.826 0.00 0.00 0.00 3.11
4930 6062 4.385754 GCTCCCTGAAGATGGAATAAAGGT 60.386 45.833 0.00 0.00 0.00 3.50
4931 6063 5.372373 CTCCCTGAAGATGGAATAAAGGTC 58.628 45.833 0.00 0.00 0.00 3.85
4932 6064 5.039645 TCCCTGAAGATGGAATAAAGGTCT 58.960 41.667 0.00 0.00 0.00 3.85
4933 6065 5.131142 TCCCTGAAGATGGAATAAAGGTCTC 59.869 44.000 0.00 0.00 0.00 3.36
4934 6066 5.372373 CCTGAAGATGGAATAAAGGTCTCC 58.628 45.833 0.00 0.00 0.00 3.71
4935 6067 5.372373 CTGAAGATGGAATAAAGGTCTCCC 58.628 45.833 0.00 0.00 0.00 4.30
4936 6068 4.166144 TGAAGATGGAATAAAGGTCTCCCC 59.834 45.833 0.00 0.00 0.00 4.81
4937 6069 2.706190 AGATGGAATAAAGGTCTCCCCG 59.294 50.000 0.00 0.00 38.74 5.73
4938 6070 0.544697 TGGAATAAAGGTCTCCCCGC 59.455 55.000 0.00 0.00 38.74 6.13
4939 6071 0.179026 GGAATAAAGGTCTCCCCGCC 60.179 60.000 0.00 0.00 38.74 6.13
4940 6072 0.837940 GAATAAAGGTCTCCCCGCCT 59.162 55.000 0.00 0.00 38.74 5.52
4941 6073 2.044758 GAATAAAGGTCTCCCCGCCTA 58.955 52.381 0.00 0.00 38.74 3.93
4942 6074 1.718280 ATAAAGGTCTCCCCGCCTAG 58.282 55.000 0.00 0.00 38.74 3.02
4943 6075 1.047034 TAAAGGTCTCCCCGCCTAGC 61.047 60.000 0.00 0.00 38.74 3.42
4944 6076 4.862823 AGGTCTCCCCGCCTAGCC 62.863 72.222 0.00 0.00 38.74 3.93
4946 6078 4.862823 GTCTCCCCGCCTAGCCCT 62.863 72.222 0.00 0.00 0.00 5.19
4947 6079 4.541648 TCTCCCCGCCTAGCCCTC 62.542 72.222 0.00 0.00 0.00 4.30
4951 6083 4.222847 CCCGCCTAGCCCTCGTTC 62.223 72.222 0.00 0.00 0.00 3.95
4952 6084 4.222847 CCGCCTAGCCCTCGTTCC 62.223 72.222 0.00 0.00 0.00 3.62
4953 6085 3.458163 CGCCTAGCCCTCGTTCCA 61.458 66.667 0.00 0.00 0.00 3.53
4954 6086 2.501610 GCCTAGCCCTCGTTCCAG 59.498 66.667 0.00 0.00 0.00 3.86
4955 6087 2.359967 GCCTAGCCCTCGTTCCAGT 61.360 63.158 0.00 0.00 0.00 4.00
4956 6088 1.517832 CCTAGCCCTCGTTCCAGTG 59.482 63.158 0.00 0.00 0.00 3.66
4957 6089 1.517832 CTAGCCCTCGTTCCAGTGG 59.482 63.158 1.40 1.40 0.00 4.00
4958 6090 1.229082 TAGCCCTCGTTCCAGTGGT 60.229 57.895 9.54 0.00 0.00 4.16
4959 6091 1.541310 TAGCCCTCGTTCCAGTGGTG 61.541 60.000 9.54 0.58 0.00 4.17
4960 6092 2.358737 CCCTCGTTCCAGTGGTGC 60.359 66.667 9.54 2.34 0.00 5.01
4961 6093 2.738521 CCTCGTTCCAGTGGTGCG 60.739 66.667 9.54 14.56 0.00 5.34
4962 6094 2.029073 CTCGTTCCAGTGGTGCGT 59.971 61.111 20.96 0.00 0.00 5.24
4963 6095 2.022129 CTCGTTCCAGTGGTGCGTC 61.022 63.158 20.96 5.35 0.00 5.19
4964 6096 2.029073 CGTTCCAGTGGTGCGTCT 59.971 61.111 9.54 0.00 0.00 4.18
4965 6097 1.174078 TCGTTCCAGTGGTGCGTCTA 61.174 55.000 20.96 6.14 0.00 2.59
4966 6098 0.732880 CGTTCCAGTGGTGCGTCTAG 60.733 60.000 9.54 0.00 0.00 2.43
4978 6110 2.665777 CGTCTAGCATCGTTGGTGG 58.334 57.895 8.40 5.61 34.79 4.61
4979 6111 0.806102 CGTCTAGCATCGTTGGTGGG 60.806 60.000 8.40 2.07 34.79 4.61
4980 6112 1.090052 GTCTAGCATCGTTGGTGGGC 61.090 60.000 8.40 3.19 34.79 5.36
4981 6113 1.078497 CTAGCATCGTTGGTGGGCA 60.078 57.895 8.40 0.00 34.79 5.36
4982 6114 0.464373 CTAGCATCGTTGGTGGGCAT 60.464 55.000 8.40 0.00 34.79 4.40
4983 6115 0.747644 TAGCATCGTTGGTGGGCATG 60.748 55.000 8.40 0.00 34.79 4.06
4984 6116 2.342650 GCATCGTTGGTGGGCATGT 61.343 57.895 0.00 0.00 0.00 3.21
4985 6117 1.507630 CATCGTTGGTGGGCATGTG 59.492 57.895 0.00 0.00 0.00 3.21
4986 6118 1.678635 ATCGTTGGTGGGCATGTGG 60.679 57.895 0.00 0.00 0.00 4.17
4987 6119 2.135903 ATCGTTGGTGGGCATGTGGA 62.136 55.000 0.00 0.00 0.00 4.02
4988 6120 2.334946 CGTTGGTGGGCATGTGGAG 61.335 63.158 0.00 0.00 0.00 3.86
4989 6121 1.978617 GTTGGTGGGCATGTGGAGG 60.979 63.158 0.00 0.00 0.00 4.30
4990 6122 2.468868 TTGGTGGGCATGTGGAGGT 61.469 57.895 0.00 0.00 0.00 3.85
4991 6123 2.361610 GGTGGGCATGTGGAGGTG 60.362 66.667 0.00 0.00 0.00 4.00
4992 6124 2.436109 GTGGGCATGTGGAGGTGT 59.564 61.111 0.00 0.00 0.00 4.16
4993 6125 1.973281 GTGGGCATGTGGAGGTGTG 60.973 63.158 0.00 0.00 0.00 3.82
4994 6126 2.436109 GGGCATGTGGAGGTGTGT 59.564 61.111 0.00 0.00 0.00 3.72
4995 6127 1.675641 GGGCATGTGGAGGTGTGTC 60.676 63.158 0.00 0.00 0.00 3.67
4996 6128 1.376466 GGCATGTGGAGGTGTGTCT 59.624 57.895 0.00 0.00 0.00 3.41
4997 6129 0.674895 GGCATGTGGAGGTGTGTCTC 60.675 60.000 0.00 0.00 0.00 3.36
5002 6134 4.436998 GGAGGTGTGTCTCCGGCG 62.437 72.222 0.00 0.00 43.19 6.46
5003 6135 4.436998 GAGGTGTGTCTCCGGCGG 62.437 72.222 22.51 22.51 0.00 6.13
5004 6136 4.988716 AGGTGTGTCTCCGGCGGA 62.989 66.667 29.14 29.14 0.00 5.54
5005 6137 3.771160 GGTGTGTCTCCGGCGGAT 61.771 66.667 31.23 0.00 0.00 4.18
5006 6138 2.202756 GTGTGTCTCCGGCGGATC 60.203 66.667 31.23 24.22 0.00 3.36
5007 6139 2.362503 TGTGTCTCCGGCGGATCT 60.363 61.111 31.23 0.00 0.00 2.75
5008 6140 1.077285 TGTGTCTCCGGCGGATCTA 60.077 57.895 31.23 15.38 0.00 1.98
5009 6141 0.467474 TGTGTCTCCGGCGGATCTAT 60.467 55.000 31.23 0.00 0.00 1.98
5010 6142 0.241481 GTGTCTCCGGCGGATCTATC 59.759 60.000 31.23 17.26 0.00 2.08
5011 6143 0.110678 TGTCTCCGGCGGATCTATCT 59.889 55.000 31.23 0.00 0.00 1.98
5012 6144 1.249407 GTCTCCGGCGGATCTATCTT 58.751 55.000 31.23 0.00 0.00 2.40
5013 6145 1.614413 GTCTCCGGCGGATCTATCTTT 59.386 52.381 31.23 0.00 0.00 2.52
5014 6146 1.613925 TCTCCGGCGGATCTATCTTTG 59.386 52.381 31.23 14.46 0.00 2.77
5015 6147 0.679505 TCCGGCGGATCTATCTTTGG 59.320 55.000 27.46 0.00 0.00 3.28
5016 6148 0.393077 CCGGCGGATCTATCTTTGGT 59.607 55.000 24.41 0.00 0.00 3.67
5017 6149 1.616865 CCGGCGGATCTATCTTTGGTA 59.383 52.381 24.41 0.00 0.00 3.25
5018 6150 2.352814 CCGGCGGATCTATCTTTGGTAG 60.353 54.545 24.41 0.00 0.00 3.18
5019 6151 2.557056 CGGCGGATCTATCTTTGGTAGA 59.443 50.000 0.00 0.00 37.28 2.59
5020 6152 3.193691 CGGCGGATCTATCTTTGGTAGAT 59.806 47.826 0.00 0.48 45.59 1.98
5021 6153 4.322049 CGGCGGATCTATCTTTGGTAGATT 60.322 45.833 0.00 0.00 40.84 2.40
5022 6154 5.552178 GGCGGATCTATCTTTGGTAGATTT 58.448 41.667 2.39 0.00 40.84 2.17
5023 6155 5.409826 GGCGGATCTATCTTTGGTAGATTTG 59.590 44.000 2.39 0.72 40.84 2.32
5024 6156 5.106908 GCGGATCTATCTTTGGTAGATTTGC 60.107 44.000 2.39 5.91 40.84 3.68
5025 6157 6.226787 CGGATCTATCTTTGGTAGATTTGCT 58.773 40.000 2.39 0.00 40.84 3.91
5026 6158 6.367422 CGGATCTATCTTTGGTAGATTTGCTC 59.633 42.308 2.39 0.00 40.84 4.26
5027 6159 6.367422 GGATCTATCTTTGGTAGATTTGCTCG 59.633 42.308 2.39 0.00 40.84 5.03
5028 6160 5.601662 TCTATCTTTGGTAGATTTGCTCGG 58.398 41.667 0.00 0.00 40.84 4.63
5029 6161 3.973206 TCTTTGGTAGATTTGCTCGGA 57.027 42.857 0.00 0.00 0.00 4.55
5030 6162 4.487714 TCTTTGGTAGATTTGCTCGGAT 57.512 40.909 0.00 0.00 0.00 4.18
5031 6163 4.442706 TCTTTGGTAGATTTGCTCGGATC 58.557 43.478 0.00 0.00 0.00 3.36
5032 6164 4.162320 TCTTTGGTAGATTTGCTCGGATCT 59.838 41.667 0.00 0.00 36.61 2.75
5033 6165 3.735237 TGGTAGATTTGCTCGGATCTC 57.265 47.619 0.00 0.00 34.60 2.75
5034 6166 2.034685 TGGTAGATTTGCTCGGATCTCG 59.965 50.000 0.00 0.00 40.90 4.04
5035 6167 2.034812 GGTAGATTTGCTCGGATCTCGT 59.965 50.000 0.00 0.00 40.32 4.18
5036 6168 2.500509 AGATTTGCTCGGATCTCGTC 57.499 50.000 0.00 0.00 40.32 4.20
5037 6169 1.124462 GATTTGCTCGGATCTCGTCG 58.876 55.000 0.00 0.00 40.32 5.12
5038 6170 0.456221 ATTTGCTCGGATCTCGTCGT 59.544 50.000 0.00 0.00 40.32 4.34
5039 6171 0.242825 TTTGCTCGGATCTCGTCGTT 59.757 50.000 0.00 0.00 40.32 3.85
5040 6172 1.089112 TTGCTCGGATCTCGTCGTTA 58.911 50.000 0.00 0.00 40.32 3.18
5041 6173 1.306148 TGCTCGGATCTCGTCGTTAT 58.694 50.000 0.00 0.00 40.32 1.89
5042 6174 1.674441 TGCTCGGATCTCGTCGTTATT 59.326 47.619 0.00 0.00 40.32 1.40
5043 6175 2.286831 TGCTCGGATCTCGTCGTTATTC 60.287 50.000 0.00 0.00 40.32 1.75
5044 6176 2.561922 CTCGGATCTCGTCGTTATTCG 58.438 52.381 0.00 4.53 40.32 3.34
5045 6177 1.935873 TCGGATCTCGTCGTTATTCGT 59.064 47.619 9.13 0.00 40.32 3.85
5046 6178 2.034789 CGGATCTCGTCGTTATTCGTG 58.965 52.381 0.00 0.00 40.80 4.35
5047 6179 2.538333 CGGATCTCGTCGTTATTCGTGT 60.538 50.000 0.00 0.00 40.80 4.49
5048 6180 3.302675 CGGATCTCGTCGTTATTCGTGTA 60.303 47.826 0.00 0.00 40.80 2.90
5049 6181 3.964970 GGATCTCGTCGTTATTCGTGTAC 59.035 47.826 0.00 0.00 40.80 2.90
5050 6182 3.025254 TCTCGTCGTTATTCGTGTACG 57.975 47.619 0.00 0.00 40.80 3.67
5051 6183 2.411748 TCTCGTCGTTATTCGTGTACGT 59.588 45.455 4.20 0.00 38.08 3.57
5052 6184 3.120683 TCTCGTCGTTATTCGTGTACGTT 60.121 43.478 0.00 0.00 38.08 3.99
5053 6185 3.152983 TCGTCGTTATTCGTGTACGTTC 58.847 45.455 0.00 0.00 38.08 3.95
5054 6186 2.038193 CGTCGTTATTCGTGTACGTTCG 60.038 50.000 0.00 0.00 40.80 3.95
5055 6187 2.902484 GTCGTTATTCGTGTACGTTCGT 59.098 45.455 0.00 2.91 40.80 3.85
5056 6188 2.901873 TCGTTATTCGTGTACGTTCGTG 59.098 45.455 8.14 0.00 40.80 4.35
5057 6189 2.651703 CGTTATTCGTGTACGTTCGTGT 59.348 45.455 8.14 0.00 40.80 4.49
5058 6190 3.477028 CGTTATTCGTGTACGTTCGTGTG 60.477 47.826 8.14 0.00 40.80 3.82
5059 6191 2.124011 ATTCGTGTACGTTCGTGTGT 57.876 45.000 8.14 0.00 40.80 3.72
5060 6192 1.465837 TTCGTGTACGTTCGTGTGTC 58.534 50.000 8.14 0.00 40.80 3.67
5061 6193 0.657312 TCGTGTACGTTCGTGTGTCT 59.343 50.000 8.14 0.00 40.80 3.41
5062 6194 1.063912 TCGTGTACGTTCGTGTGTCTT 59.936 47.619 8.14 0.00 40.80 3.01
5063 6195 1.445731 CGTGTACGTTCGTGTGTCTTC 59.554 52.381 8.14 0.00 34.11 2.87
5064 6196 1.445731 GTGTACGTTCGTGTGTCTTCG 59.554 52.381 8.14 0.00 0.00 3.79
5065 6197 1.047739 GTACGTTCGTGTGTCTTCGG 58.952 55.000 8.14 0.00 0.00 4.30
5066 6198 0.040157 TACGTTCGTGTGTCTTCGGG 60.040 55.000 8.14 0.00 0.00 5.14
5067 6199 1.299620 CGTTCGTGTGTCTTCGGGT 60.300 57.895 0.00 0.00 0.00 5.28
5068 6200 1.273455 CGTTCGTGTGTCTTCGGGTC 61.273 60.000 0.00 0.00 0.00 4.46
5069 6201 1.008194 TTCGTGTGTCTTCGGGTCG 60.008 57.895 0.00 0.00 0.00 4.79
5070 6202 1.446516 TTCGTGTGTCTTCGGGTCGA 61.447 55.000 0.00 0.00 0.00 4.20
5071 6203 1.008194 CGTGTGTCTTCGGGTCGAA 60.008 57.895 2.77 2.77 43.75 3.71
5072 6204 0.388134 CGTGTGTCTTCGGGTCGAAT 60.388 55.000 3.18 0.00 44.85 3.34
5073 6205 1.347320 GTGTGTCTTCGGGTCGAATC 58.653 55.000 3.18 1.87 44.85 2.52
5074 6206 0.245539 TGTGTCTTCGGGTCGAATCC 59.754 55.000 3.18 0.00 44.85 3.01
5075 6207 0.531200 GTGTCTTCGGGTCGAATCCT 59.469 55.000 3.18 0.00 44.85 3.24
5076 6208 1.067071 GTGTCTTCGGGTCGAATCCTT 60.067 52.381 3.18 0.00 44.85 3.36
5077 6209 1.203994 TGTCTTCGGGTCGAATCCTTC 59.796 52.381 3.18 0.00 44.85 3.46
5078 6210 0.822164 TCTTCGGGTCGAATCCTTCC 59.178 55.000 3.18 0.00 44.85 3.46
5079 6211 0.535335 CTTCGGGTCGAATCCTTCCA 59.465 55.000 3.18 0.00 44.85 3.53
5080 6212 0.978151 TTCGGGTCGAATCCTTCCAA 59.022 50.000 0.00 0.00 41.05 3.53
5081 6213 0.248289 TCGGGTCGAATCCTTCCAAC 59.752 55.000 4.79 0.00 31.06 3.77
5082 6214 0.743345 CGGGTCGAATCCTTCCAACC 60.743 60.000 4.79 0.00 33.46 3.77
5083 6215 0.618981 GGGTCGAATCCTTCCAACCT 59.381 55.000 0.00 0.00 34.24 3.50
5084 6216 1.835531 GGGTCGAATCCTTCCAACCTA 59.164 52.381 0.00 0.00 34.24 3.08
5085 6217 2.419713 GGGTCGAATCCTTCCAACCTAC 60.420 54.545 0.00 0.00 34.24 3.18
5086 6218 2.537401 GTCGAATCCTTCCAACCTACG 58.463 52.381 0.00 0.00 0.00 3.51
5087 6219 2.094338 GTCGAATCCTTCCAACCTACGT 60.094 50.000 0.00 0.00 0.00 3.57
5088 6220 2.564062 TCGAATCCTTCCAACCTACGTT 59.436 45.455 0.00 0.00 0.00 3.99
5089 6221 3.763360 TCGAATCCTTCCAACCTACGTTA 59.237 43.478 0.00 0.00 0.00 3.18
5090 6222 4.403432 TCGAATCCTTCCAACCTACGTTAT 59.597 41.667 0.00 0.00 0.00 1.89
5091 6223 5.105228 TCGAATCCTTCCAACCTACGTTATT 60.105 40.000 0.00 0.00 0.00 1.40
5092 6224 5.233689 CGAATCCTTCCAACCTACGTTATTC 59.766 44.000 0.00 0.00 0.00 1.75
5093 6225 5.952347 ATCCTTCCAACCTACGTTATTCT 57.048 39.130 0.00 0.00 0.00 2.40
5094 6226 5.750352 TCCTTCCAACCTACGTTATTCTT 57.250 39.130 0.00 0.00 0.00 2.52
5095 6227 5.727434 TCCTTCCAACCTACGTTATTCTTC 58.273 41.667 0.00 0.00 0.00 2.87
5096 6228 5.246656 TCCTTCCAACCTACGTTATTCTTCA 59.753 40.000 0.00 0.00 0.00 3.02
5097 6229 6.070424 TCCTTCCAACCTACGTTATTCTTCAT 60.070 38.462 0.00 0.00 0.00 2.57
5098 6230 6.258068 CCTTCCAACCTACGTTATTCTTCATC 59.742 42.308 0.00 0.00 0.00 2.92
5099 6231 5.345702 TCCAACCTACGTTATTCTTCATCG 58.654 41.667 0.00 0.00 0.00 3.84
5100 6232 4.506654 CCAACCTACGTTATTCTTCATCGG 59.493 45.833 0.00 0.00 0.00 4.18
5101 6233 4.996788 ACCTACGTTATTCTTCATCGGT 57.003 40.909 0.00 0.00 0.00 4.69
5102 6234 4.679662 ACCTACGTTATTCTTCATCGGTG 58.320 43.478 0.00 0.00 0.00 4.94
5103 6235 4.049186 CCTACGTTATTCTTCATCGGTGG 58.951 47.826 0.00 0.00 0.00 4.61
5104 6236 2.277084 ACGTTATTCTTCATCGGTGGC 58.723 47.619 0.00 0.00 0.00 5.01
5105 6237 1.257936 CGTTATTCTTCATCGGTGGCG 59.742 52.381 0.00 0.00 0.00 5.69
5106 6238 1.597663 GTTATTCTTCATCGGTGGCGG 59.402 52.381 0.00 0.00 0.00 6.13
5107 6239 0.828022 TATTCTTCATCGGTGGCGGT 59.172 50.000 0.00 0.00 0.00 5.68
5108 6240 0.035439 ATTCTTCATCGGTGGCGGTT 60.035 50.000 0.00 0.00 0.00 4.44
5109 6241 0.953471 TTCTTCATCGGTGGCGGTTG 60.953 55.000 0.00 0.00 0.00 3.77
5110 6242 3.039202 CTTCATCGGTGGCGGTTGC 62.039 63.158 0.00 0.00 41.71 4.17
5111 6243 3.545124 TTCATCGGTGGCGGTTGCT 62.545 57.895 0.00 0.00 42.25 3.91
5112 6244 3.803082 CATCGGTGGCGGTTGCTG 61.803 66.667 0.00 0.00 42.25 4.41
5113 6245 4.329545 ATCGGTGGCGGTTGCTGT 62.330 61.111 0.00 0.00 42.25 4.40
5114 6246 3.842925 ATCGGTGGCGGTTGCTGTT 62.843 57.895 0.00 0.00 42.25 3.16
5115 6247 4.025401 CGGTGGCGGTTGCTGTTC 62.025 66.667 0.00 0.00 42.25 3.18
5116 6248 2.594592 GGTGGCGGTTGCTGTTCT 60.595 61.111 0.00 0.00 42.25 3.01
5117 6249 2.639286 GTGGCGGTTGCTGTTCTG 59.361 61.111 0.00 0.00 42.25 3.02
5118 6250 2.594303 TGGCGGTTGCTGTTCTGG 60.594 61.111 0.00 0.00 42.25 3.86
5119 6251 2.594592 GGCGGTTGCTGTTCTGGT 60.595 61.111 0.00 0.00 42.25 4.00
5120 6252 2.639286 GCGGTTGCTGTTCTGGTG 59.361 61.111 0.00 0.00 38.39 4.17
5121 6253 2.639286 CGGTTGCTGTTCTGGTGC 59.361 61.111 0.00 0.00 0.00 5.01
5122 6254 2.186160 CGGTTGCTGTTCTGGTGCA 61.186 57.895 0.00 0.00 34.69 4.57
5123 6255 1.360192 GGTTGCTGTTCTGGTGCAC 59.640 57.895 8.80 8.80 36.37 4.57
5124 6256 1.103398 GGTTGCTGTTCTGGTGCACT 61.103 55.000 17.98 0.00 36.37 4.40
5125 6257 0.029834 GTTGCTGTTCTGGTGCACTG 59.970 55.000 17.98 10.30 36.37 3.66
5126 6258 1.102809 TTGCTGTTCTGGTGCACTGG 61.103 55.000 17.98 9.89 36.37 4.00
5127 6259 1.526917 GCTGTTCTGGTGCACTGGT 60.527 57.895 17.98 0.00 0.00 4.00
5128 6260 1.510480 GCTGTTCTGGTGCACTGGTC 61.510 60.000 17.98 0.00 0.00 4.02
5129 6261 0.886490 CTGTTCTGGTGCACTGGTCC 60.886 60.000 17.98 0.00 0.00 4.46
5130 6262 1.344953 TGTTCTGGTGCACTGGTCCT 61.345 55.000 17.98 0.00 0.00 3.85
5131 6263 0.685097 GTTCTGGTGCACTGGTCCTA 59.315 55.000 17.98 0.00 0.00 2.94
5132 6264 1.279271 GTTCTGGTGCACTGGTCCTAT 59.721 52.381 17.98 0.00 0.00 2.57
5133 6265 0.904649 TCTGGTGCACTGGTCCTATG 59.095 55.000 17.98 0.00 0.00 2.23
5134 6266 0.107508 CTGGTGCACTGGTCCTATGG 60.108 60.000 17.98 0.00 0.00 2.74
5135 6267 1.224592 GGTGCACTGGTCCTATGGG 59.775 63.158 17.98 0.00 0.00 4.00
5136 6268 1.224592 GTGCACTGGTCCTATGGGG 59.775 63.158 10.32 0.00 0.00 4.96
5137 6269 2.193248 GCACTGGTCCTATGGGGC 59.807 66.667 0.00 0.00 36.26 5.80
5144 6276 2.539983 GTCCTATGGGGCCTTAGCA 58.460 57.895 0.84 0.00 42.56 3.49
5145 6277 0.108774 GTCCTATGGGGCCTTAGCAC 59.891 60.000 0.84 0.00 43.97 4.40
5146 6278 1.071471 CCTATGGGGCCTTAGCACG 59.929 63.158 0.84 0.00 46.55 5.34
5147 6279 1.407656 CCTATGGGGCCTTAGCACGA 61.408 60.000 0.84 0.00 46.55 4.35
5148 6280 0.249911 CTATGGGGCCTTAGCACGAC 60.250 60.000 0.84 0.00 46.55 4.34
5149 6281 2.023414 TATGGGGCCTTAGCACGACG 62.023 60.000 0.84 0.00 46.55 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 48 3.459063 GAGCCCTTACTCCGCCGT 61.459 66.667 0.00 0.00 0.00 5.68
189 487 8.451908 AGCTATAGCCTCGTATTTGAAATTTT 57.548 30.769 21.17 0.00 43.38 1.82
256 554 1.727335 GTGTCCGAAGTGCTTAGCTTC 59.273 52.381 5.60 0.77 39.03 3.86
270 568 5.408604 AGTGTATTTTTCAGCTTAGTGTCCG 59.591 40.000 0.00 0.00 0.00 4.79
371 669 7.899178 TGTGGAATACAGTAATACACTTGTG 57.101 36.000 11.63 0.00 34.26 3.33
372 670 8.911918 TTTGTGGAATACAGTAATACACTTGT 57.088 30.769 11.63 0.00 41.10 3.16
373 671 7.962918 GCTTTGTGGAATACAGTAATACACTTG 59.037 37.037 11.63 4.13 41.10 3.16
374 672 7.120726 GGCTTTGTGGAATACAGTAATACACTT 59.879 37.037 11.63 0.00 41.10 3.16
376 674 6.373216 TGGCTTTGTGGAATACAGTAATACAC 59.627 38.462 4.19 4.19 41.10 2.90
377 675 6.373216 GTGGCTTTGTGGAATACAGTAATACA 59.627 38.462 0.00 0.00 41.10 2.29
378 676 6.183360 GGTGGCTTTGTGGAATACAGTAATAC 60.183 42.308 0.00 0.00 41.10 1.89
379 677 5.883673 GGTGGCTTTGTGGAATACAGTAATA 59.116 40.000 0.00 0.00 41.10 0.98
380 678 4.705023 GGTGGCTTTGTGGAATACAGTAAT 59.295 41.667 0.00 0.00 41.10 1.89
381 679 4.076394 GGTGGCTTTGTGGAATACAGTAA 58.924 43.478 0.00 0.00 41.10 2.24
451 749 0.726827 TCAATAAGCAAGCTTCGCGG 59.273 50.000 11.05 0.48 37.47 6.46
727 1028 5.582269 TCTGCTGTAGTTCTGCAATTACATC 59.418 40.000 3.11 0.00 47.00 3.06
817 1142 3.206150 GCTCAAACTTCAGAGTGGTTGA 58.794 45.455 6.02 6.02 35.91 3.18
898 1223 0.684479 TGGACAGACTCCGGGATGAG 60.684 60.000 0.00 0.00 43.03 2.90
971 1305 3.003068 GCGCTGTTGAAATCATATGCTCT 59.997 43.478 0.00 0.00 0.00 4.09
994 1328 1.826720 CAAAGCCATGGCCATAGTTGT 59.173 47.619 33.14 9.27 43.17 3.32
1035 1369 2.203437 ACGTTGGAAAGCACCCCC 60.203 61.111 0.00 0.00 0.00 5.40
1410 1745 2.301870 ACTGCCGTAGAATTCCAGACAA 59.698 45.455 13.52 0.00 0.00 3.18
1623 1976 4.993705 ATGAACTCCTAGTTTTCCCACA 57.006 40.909 0.00 0.00 38.80 4.17
1687 2043 4.121317 ACAATGGAAAACACATGCAACTG 58.879 39.130 0.00 0.00 0.00 3.16
1713 2069 0.999712 TCTTTCCAACCCCTCCCATC 59.000 55.000 0.00 0.00 0.00 3.51
1752 2108 6.647334 TTCTTCACATTTGTATCCTTGCAA 57.353 33.333 0.00 0.00 0.00 4.08
2029 2388 5.077564 GGTGACCAAAATCCTACTTCCTTT 58.922 41.667 0.00 0.00 0.00 3.11
2061 2428 0.530870 CTAGCTTAGCAACCTCGGGC 60.531 60.000 7.07 0.00 0.00 6.13
2165 2539 2.100584 TCCATGTTGTTGCACAAAGTCC 59.899 45.455 3.74 0.00 40.15 3.85
2183 2557 2.449031 AATGCGCTCCAACGACTCCA 62.449 55.000 9.73 0.00 34.06 3.86
2358 2746 6.074544 AGGTACATATAACTCAGTCGAAGC 57.925 41.667 0.00 0.00 0.00 3.86
2553 2941 8.991243 TTACATACTTAACACTATGTGGTGAC 57.009 34.615 3.41 0.00 40.13 3.67
2700 3120 4.687901 TTCAGAACACTGAACATCTCCA 57.312 40.909 8.32 0.00 43.06 3.86
2804 3224 1.806542 CCTTGAACCAACAGTCCATCG 59.193 52.381 0.00 0.00 0.00 3.84
2963 3452 2.360483 ACTTCGAGATGATGCAGACGAT 59.640 45.455 0.00 0.00 0.00 3.73
3006 3495 5.269554 AGTCTGGGGGAAACATTTCAATA 57.730 39.130 6.68 0.00 38.92 1.90
3109 3598 0.521735 GGACTTTGCGGACACCATTC 59.478 55.000 0.00 0.00 0.00 2.67
3137 3635 4.384056 AGGCAATACTTCCATCATCTTCG 58.616 43.478 0.00 0.00 0.00 3.79
3174 3684 9.716531 CCTCTATAATTCTCTACATGCAAATGA 57.283 33.333 0.00 0.00 0.00 2.57
3195 3705 4.646945 CAGCTAGGACAAGATTCACCTCTA 59.353 45.833 0.00 0.00 34.42 2.43
3323 3839 8.370493 ACGATTAATGTTATCTGAAGGTGATG 57.630 34.615 0.00 0.00 0.00 3.07
3397 3913 1.137872 AGAAGTAGGCAAGAGCATCGG 59.862 52.381 0.00 0.00 44.61 4.18
3441 3957 1.001974 CGATCCATGGAATAGCCCGAA 59.998 52.381 20.67 0.00 34.97 4.30
3592 4108 3.120321 TGATGTAAGGTTGTCGCAACT 57.880 42.857 17.89 6.31 0.00 3.16
3889 4716 2.004733 GCACCCCGTTATGTACACTTC 58.995 52.381 0.00 0.00 0.00 3.01
3944 5036 2.534349 CGTCATTGTACATACCAGCGAC 59.466 50.000 0.00 0.00 0.00 5.19
3945 5037 2.480587 CCGTCATTGTACATACCAGCGA 60.481 50.000 0.00 0.00 0.00 4.93
3946 5038 1.858458 CCGTCATTGTACATACCAGCG 59.142 52.381 0.00 0.00 0.00 5.18
3990 5082 8.116753 CGCAGATAAAATCTAACGAAGAAATGT 58.883 33.333 0.00 0.00 39.25 2.71
4013 5106 4.631131 AGATTAACATGCAGCTATACGCA 58.369 39.130 0.00 0.00 43.45 5.24
4058 5151 5.564651 CGAATGCATGTTAAACCTGTTTCCT 60.565 40.000 0.00 0.00 34.23 3.36
4067 5160 6.087555 CAGTACAAACCGAATGCATGTTAAAC 59.912 38.462 0.00 0.51 0.00 2.01
4068 5161 6.146216 CAGTACAAACCGAATGCATGTTAAA 58.854 36.000 0.00 0.00 0.00 1.52
4141 5234 7.870509 ACGTGTACTTCATCTATTACCTACA 57.129 36.000 0.00 0.00 0.00 2.74
4149 5242 6.983307 AGTACTCGTACGTGTACTTCATCTAT 59.017 38.462 38.02 23.72 46.61 1.98
4150 5243 6.333416 AGTACTCGTACGTGTACTTCATCTA 58.667 40.000 38.02 15.54 46.61 1.98
4151 5244 5.174395 AGTACTCGTACGTGTACTTCATCT 58.826 41.667 38.02 24.77 46.61 2.90
4152 5245 5.462034 AGTACTCGTACGTGTACTTCATC 57.538 43.478 38.02 22.92 46.61 2.92
4153 5246 5.869344 TGTAGTACTCGTACGTGTACTTCAT 59.131 40.000 43.08 30.80 46.61 2.57
4154 5247 5.227152 TGTAGTACTCGTACGTGTACTTCA 58.773 41.667 43.08 40.26 46.61 3.02
4155 5248 5.763444 TGTAGTACTCGTACGTGTACTTC 57.237 43.478 43.08 38.93 46.61 3.01
4156 5249 6.368791 TCATTGTAGTACTCGTACGTGTACTT 59.631 38.462 43.08 32.54 46.61 2.24
4158 5251 6.094739 TCATTGTAGTACTCGTACGTGTAC 57.905 41.667 35.77 35.77 42.18 2.90
4159 5252 5.869344 ACTCATTGTAGTACTCGTACGTGTA 59.131 40.000 22.37 22.37 40.80 2.90
4160 5253 4.692625 ACTCATTGTAGTACTCGTACGTGT 59.307 41.667 24.33 24.33 40.80 4.49
4161 5254 5.163923 TGACTCATTGTAGTACTCGTACGTG 60.164 44.000 16.05 15.64 40.80 4.49
4162 5255 4.931601 TGACTCATTGTAGTACTCGTACGT 59.068 41.667 16.05 0.00 40.80 3.57
4163 5256 5.460571 TGACTCATTGTAGTACTCGTACG 57.539 43.478 9.53 9.53 40.80 3.67
4164 5257 6.128066 CGATGACTCATTGTAGTACTCGTAC 58.872 44.000 0.00 0.00 32.77 3.67
4165 5258 5.235831 CCGATGACTCATTGTAGTACTCGTA 59.764 44.000 0.00 0.00 34.29 3.43
4166 5259 4.035324 CCGATGACTCATTGTAGTACTCGT 59.965 45.833 0.00 0.00 34.29 4.18
4167 5260 4.272748 TCCGATGACTCATTGTAGTACTCG 59.727 45.833 0.00 0.00 35.15 4.18
4178 5284 1.134068 TCTCCTCGTCCGATGACTCAT 60.134 52.381 0.00 0.00 39.47 2.90
4207 5313 0.657312 TGCATCATCGCCGTTTCATC 59.343 50.000 0.00 0.00 0.00 2.92
4232 5338 5.411053 CCTGAAATCAGAGAACTTCAAGGAC 59.589 44.000 11.94 0.00 46.59 3.85
4239 5345 4.467795 TCGATCCCTGAAATCAGAGAACTT 59.532 41.667 11.94 0.00 46.59 2.66
4247 5353 3.181451 CCCTTGATCGATCCCTGAAATCA 60.181 47.826 22.31 0.00 0.00 2.57
4252 5358 1.342975 TGACCCTTGATCGATCCCTGA 60.343 52.381 22.31 0.65 0.00 3.86
4253 5359 1.123077 TGACCCTTGATCGATCCCTG 58.877 55.000 22.31 11.79 0.00 4.45
4255 5361 1.337260 CGATGACCCTTGATCGATCCC 60.337 57.143 22.31 0.00 43.36 3.85
4261 5367 2.932614 CAACACTCGATGACCCTTGATC 59.067 50.000 0.00 0.00 0.00 2.92
4274 5380 1.002250 CTCGTCCGGTTCAACACTCG 61.002 60.000 0.00 0.00 0.00 4.18
4280 5386 2.257371 CGCTCTCGTCCGGTTCAA 59.743 61.111 0.00 0.00 0.00 2.69
4297 5403 2.160221 CAACATCAAATGCCGCCGC 61.160 57.895 0.00 0.00 0.00 6.53
4311 5417 4.262894 GGACAAAGTAGTCATCCCTCAACA 60.263 45.833 0.00 0.00 40.29 3.33
4331 5437 2.106683 CCTTGAATGCGTCGGGGAC 61.107 63.158 0.00 0.00 0.00 4.46
4335 5441 1.086696 ATTGTCCTTGAATGCGTCGG 58.913 50.000 0.00 0.00 0.00 4.79
4339 5445 5.163933 CCATCAAAAATTGTCCTTGAATGCG 60.164 40.000 0.00 0.00 33.08 4.73
4348 5454 5.335035 CCAAACATGCCATCAAAAATTGTCC 60.335 40.000 0.00 0.00 0.00 4.02
4359 5465 5.518848 TTATCACATCCAAACATGCCATC 57.481 39.130 0.00 0.00 0.00 3.51
4406 5512 1.268079 GTTATAGTAGGACCGGACGCC 59.732 57.143 9.46 6.55 0.00 5.68
4407 5513 2.225467 AGTTATAGTAGGACCGGACGC 58.775 52.381 9.46 0.00 0.00 5.19
4452 5558 6.044411 AGGTAGAGAATCCAATCCTTCCTA 57.956 41.667 0.00 0.00 33.66 2.94
4472 5604 2.094494 CAGTCGTGCAGTTCTGATAGGT 60.094 50.000 3.84 0.00 0.00 3.08
4500 5632 8.706322 AAAATAAAATACTTCAGGGTCTGTGT 57.294 30.769 0.00 0.00 32.61 3.72
4555 5687 2.093306 CCAATGCGACAGTGGTTCTA 57.907 50.000 15.21 0.00 43.53 2.10
4561 5693 5.639757 TGAAAATATTCCAATGCGACAGTG 58.360 37.500 0.00 0.00 34.49 3.66
4599 5731 8.665685 CCCGCGAGCTTAAAATAATAGAATATT 58.334 33.333 8.23 0.00 0.00 1.28
4609 5741 3.772619 AGCCCGCGAGCTTAAAATA 57.227 47.368 10.21 0.00 41.41 1.40
4621 5753 2.095212 CCACTCTTTTTCTTAAGCCCGC 60.095 50.000 0.00 0.00 0.00 6.13
4623 5755 2.890945 TGCCACTCTTTTTCTTAAGCCC 59.109 45.455 0.00 0.00 0.00 5.19
4649 5781 5.941788 ACCATCCAACTTTGTCTTCTAAGT 58.058 37.500 0.00 0.00 40.23 2.24
4650 5782 5.120830 CGACCATCCAACTTTGTCTTCTAAG 59.879 44.000 0.00 0.00 33.82 2.18
4661 5793 2.433436 GTTTAGCCGACCATCCAACTT 58.567 47.619 0.00 0.00 0.00 2.66
4672 5804 2.222445 GCTTCAACTTTCGTTTAGCCGA 59.778 45.455 0.00 0.00 34.52 5.54
4673 5805 2.032377 TGCTTCAACTTTCGTTTAGCCG 60.032 45.455 0.00 0.00 37.39 5.52
4678 5810 3.866910 TCGTACTGCTTCAACTTTCGTTT 59.133 39.130 0.00 0.00 0.00 3.60
4679 5811 3.450578 TCGTACTGCTTCAACTTTCGTT 58.549 40.909 0.00 0.00 0.00 3.85
4680 5812 3.050619 CTCGTACTGCTTCAACTTTCGT 58.949 45.455 0.00 0.00 0.00 3.85
4681 5813 2.159960 GCTCGTACTGCTTCAACTTTCG 60.160 50.000 0.00 0.00 0.00 3.46
4682 5814 2.800544 TGCTCGTACTGCTTCAACTTTC 59.199 45.455 8.73 0.00 0.00 2.62
4683 5815 2.833794 TGCTCGTACTGCTTCAACTTT 58.166 42.857 8.73 0.00 0.00 2.66
4684 5816 2.526304 TGCTCGTACTGCTTCAACTT 57.474 45.000 8.73 0.00 0.00 2.66
4685 5817 2.135933 GTTGCTCGTACTGCTTCAACT 58.864 47.619 8.73 0.00 33.21 3.16
4686 5818 1.194772 GGTTGCTCGTACTGCTTCAAC 59.805 52.381 8.73 6.92 34.68 3.18
4687 5819 1.508632 GGTTGCTCGTACTGCTTCAA 58.491 50.000 8.73 0.00 0.00 2.69
4688 5820 0.666274 CGGTTGCTCGTACTGCTTCA 60.666 55.000 8.73 0.00 0.00 3.02
4689 5821 0.666577 ACGGTTGCTCGTACTGCTTC 60.667 55.000 8.73 3.11 41.98 3.86
4690 5822 0.666577 GACGGTTGCTCGTACTGCTT 60.667 55.000 8.73 0.00 43.96 3.91
4691 5823 1.080705 GACGGTTGCTCGTACTGCT 60.081 57.895 8.73 0.00 43.96 4.24
4692 5824 2.434134 CGACGGTTGCTCGTACTGC 61.434 63.158 0.85 0.00 43.96 4.40
4693 5825 2.434134 GCGACGGTTGCTCGTACTG 61.434 63.158 13.15 0.00 43.96 2.74
4694 5826 2.126580 GCGACGGTTGCTCGTACT 60.127 61.111 13.15 0.00 43.96 2.73
4695 5827 2.126580 AGCGACGGTTGCTCGTAC 60.127 61.111 17.13 0.00 43.96 3.67
4701 5833 3.991536 GAGGAGGAGCGACGGTTGC 62.992 68.421 12.54 12.54 0.00 4.17
4702 5834 2.182030 GAGGAGGAGCGACGGTTG 59.818 66.667 0.00 0.00 0.00 3.77
4703 5835 3.069318 GGAGGAGGAGCGACGGTT 61.069 66.667 0.00 0.00 0.00 4.44
4704 5836 3.881019 TTGGAGGAGGAGCGACGGT 62.881 63.158 0.00 0.00 0.00 4.83
4705 5837 3.068691 TTGGAGGAGGAGCGACGG 61.069 66.667 0.00 0.00 0.00 4.79
4706 5838 1.595993 TTCTTGGAGGAGGAGCGACG 61.596 60.000 0.00 0.00 0.00 5.12
4707 5839 0.608640 TTTCTTGGAGGAGGAGCGAC 59.391 55.000 0.00 0.00 0.00 5.19
4708 5840 0.898320 CTTTCTTGGAGGAGGAGCGA 59.102 55.000 0.00 0.00 0.00 4.93
4709 5841 0.898320 TCTTTCTTGGAGGAGGAGCG 59.102 55.000 0.00 0.00 0.00 5.03
4710 5842 3.244735 ACTTTCTTTCTTGGAGGAGGAGC 60.245 47.826 0.00 0.00 0.00 4.70
4711 5843 4.632327 ACTTTCTTTCTTGGAGGAGGAG 57.368 45.455 0.00 0.00 0.00 3.69
4712 5844 5.013183 CCTAACTTTCTTTCTTGGAGGAGGA 59.987 44.000 0.00 0.00 0.00 3.71
4713 5845 5.249420 CCTAACTTTCTTTCTTGGAGGAGG 58.751 45.833 0.00 0.00 0.00 4.30
4714 5846 5.221945 ACCCTAACTTTCTTTCTTGGAGGAG 60.222 44.000 0.00 0.00 0.00 3.69
4715 5847 4.663592 ACCCTAACTTTCTTTCTTGGAGGA 59.336 41.667 0.00 0.00 0.00 3.71
4716 5848 4.986783 ACCCTAACTTTCTTTCTTGGAGG 58.013 43.478 0.00 0.00 0.00 4.30
4717 5849 5.473846 GGAACCCTAACTTTCTTTCTTGGAG 59.526 44.000 0.00 0.00 0.00 3.86
4718 5850 5.133830 AGGAACCCTAACTTTCTTTCTTGGA 59.866 40.000 0.00 0.00 28.47 3.53
4719 5851 5.241728 CAGGAACCCTAACTTTCTTTCTTGG 59.758 44.000 0.00 0.00 29.64 3.61
4720 5852 5.278512 GCAGGAACCCTAACTTTCTTTCTTG 60.279 44.000 0.00 0.00 29.64 3.02
4721 5853 4.827835 GCAGGAACCCTAACTTTCTTTCTT 59.172 41.667 0.00 0.00 29.64 2.52
4722 5854 4.399219 GCAGGAACCCTAACTTTCTTTCT 58.601 43.478 0.00 0.00 29.64 2.52
4723 5855 3.506455 GGCAGGAACCCTAACTTTCTTTC 59.494 47.826 0.00 0.00 29.64 2.62
4724 5856 3.140332 AGGCAGGAACCCTAACTTTCTTT 59.860 43.478 0.00 0.00 29.64 2.52
4725 5857 2.716969 AGGCAGGAACCCTAACTTTCTT 59.283 45.455 0.00 0.00 29.64 2.52
4726 5858 2.306219 GAGGCAGGAACCCTAACTTTCT 59.694 50.000 0.00 0.00 31.41 2.52
4727 5859 2.306219 AGAGGCAGGAACCCTAACTTTC 59.694 50.000 0.00 0.00 31.41 2.62
4728 5860 2.306219 GAGAGGCAGGAACCCTAACTTT 59.694 50.000 0.00 0.00 31.41 2.66
4729 5861 1.909986 GAGAGGCAGGAACCCTAACTT 59.090 52.381 0.00 0.00 31.41 2.66
4730 5862 1.574263 GAGAGGCAGGAACCCTAACT 58.426 55.000 0.00 0.00 31.41 2.24
4731 5863 0.175989 CGAGAGGCAGGAACCCTAAC 59.824 60.000 0.00 0.00 31.41 2.34
4732 5864 1.614241 GCGAGAGGCAGGAACCCTAA 61.614 60.000 0.00 0.00 42.87 2.69
4733 5865 2.058595 GCGAGAGGCAGGAACCCTA 61.059 63.158 0.00 0.00 42.87 3.53
4734 5866 3.394836 GCGAGAGGCAGGAACCCT 61.395 66.667 0.00 0.00 42.87 4.34
4775 5907 4.410400 CCAAGGGCCACCGGAGAC 62.410 72.222 9.46 0.00 43.47 3.36
4795 5927 4.552365 ATCCACCGCGCCTCCATG 62.552 66.667 0.00 0.00 0.00 3.66
4796 5928 4.241555 GATCCACCGCGCCTCCAT 62.242 66.667 0.00 0.00 0.00 3.41
4799 5931 4.899239 CAGGATCCACCGCGCCTC 62.899 72.222 15.82 0.00 44.74 4.70
4803 5935 4.776322 TTGCCAGGATCCACCGCG 62.776 66.667 15.82 0.00 44.74 6.46
4804 5936 2.825836 CTTGCCAGGATCCACCGC 60.826 66.667 15.82 12.41 44.74 5.68
4805 5937 2.124570 CCTTGCCAGGATCCACCG 60.125 66.667 15.82 1.33 44.19 4.94
4806 5938 2.276740 CCCTTGCCAGGATCCACC 59.723 66.667 15.82 1.73 44.19 4.61
4807 5939 1.379044 CACCCTTGCCAGGATCCAC 60.379 63.158 15.82 3.31 44.19 4.02
4808 5940 2.615465 CCACCCTTGCCAGGATCCA 61.615 63.158 15.82 0.00 44.19 3.41
4809 5941 2.276740 CCACCCTTGCCAGGATCC 59.723 66.667 5.14 2.48 44.19 3.36
4810 5942 2.440980 GCCACCCTTGCCAGGATC 60.441 66.667 5.14 0.00 44.19 3.36
4811 5943 4.431131 CGCCACCCTTGCCAGGAT 62.431 66.667 5.14 0.00 44.19 3.24
4828 5960 0.327259 ACTAAAAACGGAGCCCTCCC 59.673 55.000 8.68 0.00 46.96 4.30
4829 5961 1.002773 TGACTAAAAACGGAGCCCTCC 59.997 52.381 4.19 4.19 46.18 4.30
4830 5962 2.467566 TGACTAAAAACGGAGCCCTC 57.532 50.000 0.00 0.00 0.00 4.30
4831 5963 3.434940 AATGACTAAAAACGGAGCCCT 57.565 42.857 0.00 0.00 0.00 5.19
4832 5964 4.514781 AAAATGACTAAAAACGGAGCCC 57.485 40.909 0.00 0.00 0.00 5.19
4854 5986 6.153680 ACACAAACCCTAACATGACAGAAAAA 59.846 34.615 0.00 0.00 0.00 1.94
4855 5987 5.654650 ACACAAACCCTAACATGACAGAAAA 59.345 36.000 0.00 0.00 0.00 2.29
4856 5988 5.197451 ACACAAACCCTAACATGACAGAAA 58.803 37.500 0.00 0.00 0.00 2.52
4857 5989 4.787551 ACACAAACCCTAACATGACAGAA 58.212 39.130 0.00 0.00 0.00 3.02
4858 5990 4.431416 ACACAAACCCTAACATGACAGA 57.569 40.909 0.00 0.00 0.00 3.41
4859 5991 4.821805 AGAACACAAACCCTAACATGACAG 59.178 41.667 0.00 0.00 0.00 3.51
4860 5992 4.578516 CAGAACACAAACCCTAACATGACA 59.421 41.667 0.00 0.00 0.00 3.58
4861 5993 4.556699 GCAGAACACAAACCCTAACATGAC 60.557 45.833 0.00 0.00 0.00 3.06
4862 5994 3.568007 GCAGAACACAAACCCTAACATGA 59.432 43.478 0.00 0.00 0.00 3.07
4863 5995 3.569701 AGCAGAACACAAACCCTAACATG 59.430 43.478 0.00 0.00 0.00 3.21
4864 5996 3.821033 GAGCAGAACACAAACCCTAACAT 59.179 43.478 0.00 0.00 0.00 2.71
4865 5997 3.211045 GAGCAGAACACAAACCCTAACA 58.789 45.455 0.00 0.00 0.00 2.41
4866 5998 3.211045 TGAGCAGAACACAAACCCTAAC 58.789 45.455 0.00 0.00 0.00 2.34
4867 5999 3.476552 CTGAGCAGAACACAAACCCTAA 58.523 45.455 0.00 0.00 0.00 2.69
4868 6000 2.224523 CCTGAGCAGAACACAAACCCTA 60.225 50.000 0.00 0.00 0.00 3.53
4869 6001 1.477558 CCTGAGCAGAACACAAACCCT 60.478 52.381 0.00 0.00 0.00 4.34
4870 6002 0.954452 CCTGAGCAGAACACAAACCC 59.046 55.000 0.00 0.00 0.00 4.11
4871 6003 1.967319 TCCTGAGCAGAACACAAACC 58.033 50.000 0.00 0.00 0.00 3.27
4872 6004 2.291741 CCTTCCTGAGCAGAACACAAAC 59.708 50.000 0.00 0.00 0.00 2.93
4873 6005 2.575532 CCTTCCTGAGCAGAACACAAA 58.424 47.619 0.00 0.00 0.00 2.83
4874 6006 1.815408 GCCTTCCTGAGCAGAACACAA 60.815 52.381 0.00 0.00 0.00 3.33
4875 6007 0.250467 GCCTTCCTGAGCAGAACACA 60.250 55.000 0.00 0.00 0.00 3.72
4876 6008 1.294659 CGCCTTCCTGAGCAGAACAC 61.295 60.000 0.00 0.00 0.00 3.32
4877 6009 1.004560 CGCCTTCCTGAGCAGAACA 60.005 57.895 0.00 0.00 0.00 3.18
4878 6010 0.739112 CTCGCCTTCCTGAGCAGAAC 60.739 60.000 0.00 0.00 0.00 3.01
4879 6011 0.900182 TCTCGCCTTCCTGAGCAGAA 60.900 55.000 0.00 0.00 32.20 3.02
4880 6012 1.304464 TCTCGCCTTCCTGAGCAGA 60.304 57.895 0.00 0.00 32.20 4.26
4881 6013 1.153667 GTCTCGCCTTCCTGAGCAG 60.154 63.158 0.00 0.00 32.20 4.24
4882 6014 2.973899 GTCTCGCCTTCCTGAGCA 59.026 61.111 0.00 0.00 32.20 4.26
4883 6015 2.202676 CGTCTCGCCTTCCTGAGC 60.203 66.667 0.00 0.00 32.20 4.26
4884 6016 2.492090 CCGTCTCGCCTTCCTGAG 59.508 66.667 0.00 0.00 0.00 3.35
4885 6017 3.760035 GCCGTCTCGCCTTCCTGA 61.760 66.667 0.00 0.00 0.00 3.86
4902 6034 3.854669 ATCTTCAGGGAGCCGCCG 61.855 66.667 0.00 0.00 37.63 6.46
4903 6035 2.203126 CATCTTCAGGGAGCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
4904 6036 2.203126 CCATCTTCAGGGAGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
4905 6037 0.471617 ATTCCATCTTCAGGGAGCCG 59.528 55.000 0.00 0.00 34.02 5.52
4906 6038 3.864789 TTATTCCATCTTCAGGGAGCC 57.135 47.619 0.00 0.00 34.02 4.70
4907 6039 4.140536 CCTTTATTCCATCTTCAGGGAGC 58.859 47.826 0.00 0.00 34.02 4.70
4908 6040 5.131809 AGACCTTTATTCCATCTTCAGGGAG 59.868 44.000 0.00 0.00 34.02 4.30
4909 6041 5.039645 AGACCTTTATTCCATCTTCAGGGA 58.960 41.667 0.00 0.00 0.00 4.20
4910 6042 5.372373 GAGACCTTTATTCCATCTTCAGGG 58.628 45.833 0.00 0.00 0.00 4.45
4911 6043 5.372373 GGAGACCTTTATTCCATCTTCAGG 58.628 45.833 0.00 0.00 0.00 3.86
4929 6061 4.862823 AGGGCTAGGCGGGGAGAC 62.863 72.222 10.58 0.00 0.00 3.36
4930 6062 4.541648 GAGGGCTAGGCGGGGAGA 62.542 72.222 10.58 0.00 0.00 3.71
4934 6066 4.222847 GAACGAGGGCTAGGCGGG 62.223 72.222 10.58 4.34 0.00 6.13
4935 6067 4.222847 GGAACGAGGGCTAGGCGG 62.223 72.222 10.58 4.71 0.00 6.13
4936 6068 3.432051 CTGGAACGAGGGCTAGGCG 62.432 68.421 10.58 0.00 0.00 5.52
4937 6069 2.359967 ACTGGAACGAGGGCTAGGC 61.360 63.158 8.00 8.00 0.00 3.93
4938 6070 1.517832 CACTGGAACGAGGGCTAGG 59.482 63.158 0.00 0.00 0.00 3.02
4939 6071 1.258445 ACCACTGGAACGAGGGCTAG 61.258 60.000 0.71 0.00 0.00 3.42
4940 6072 1.229082 ACCACTGGAACGAGGGCTA 60.229 57.895 0.71 0.00 0.00 3.93
4941 6073 2.526873 ACCACTGGAACGAGGGCT 60.527 61.111 0.71 0.00 0.00 5.19
4942 6074 2.358737 CACCACTGGAACGAGGGC 60.359 66.667 0.71 0.00 0.00 5.19
4943 6075 2.358737 GCACCACTGGAACGAGGG 60.359 66.667 0.71 0.00 0.00 4.30
4944 6076 2.738521 CGCACCACTGGAACGAGG 60.739 66.667 0.71 0.00 0.00 4.63
4945 6077 2.022129 GACGCACCACTGGAACGAG 61.022 63.158 17.57 4.43 0.00 4.18
4946 6078 1.174078 TAGACGCACCACTGGAACGA 61.174 55.000 17.57 0.00 0.00 3.85
4947 6079 0.732880 CTAGACGCACCACTGGAACG 60.733 60.000 0.71 7.47 0.00 3.95
4948 6080 1.014564 GCTAGACGCACCACTGGAAC 61.015 60.000 0.71 0.00 38.92 3.62
4949 6081 1.292223 GCTAGACGCACCACTGGAA 59.708 57.895 0.71 0.00 38.92 3.53
4950 6082 1.906333 TGCTAGACGCACCACTGGA 60.906 57.895 0.71 0.00 45.47 3.86
4951 6083 2.656646 TGCTAGACGCACCACTGG 59.343 61.111 0.00 0.00 45.47 4.00
4959 6091 1.421410 CCACCAACGATGCTAGACGC 61.421 60.000 0.00 0.00 39.77 5.19
4960 6092 0.806102 CCCACCAACGATGCTAGACG 60.806 60.000 0.00 0.00 0.00 4.18
4961 6093 1.090052 GCCCACCAACGATGCTAGAC 61.090 60.000 0.00 0.00 0.00 2.59
4962 6094 1.220749 GCCCACCAACGATGCTAGA 59.779 57.895 0.00 0.00 0.00 2.43
4963 6095 0.464373 ATGCCCACCAACGATGCTAG 60.464 55.000 0.00 0.00 0.00 3.42
4964 6096 0.747644 CATGCCCACCAACGATGCTA 60.748 55.000 0.00 0.00 0.00 3.49
4965 6097 2.048023 CATGCCCACCAACGATGCT 61.048 57.895 0.00 0.00 0.00 3.79
4966 6098 2.342650 ACATGCCCACCAACGATGC 61.343 57.895 0.00 0.00 0.00 3.91
4967 6099 1.507630 CACATGCCCACCAACGATG 59.492 57.895 0.00 0.00 0.00 3.84
4968 6100 1.678635 CCACATGCCCACCAACGAT 60.679 57.895 0.00 0.00 0.00 3.73
4969 6101 2.282110 CCACATGCCCACCAACGA 60.282 61.111 0.00 0.00 0.00 3.85
4970 6102 2.282110 TCCACATGCCCACCAACG 60.282 61.111 0.00 0.00 0.00 4.10
4971 6103 1.978617 CCTCCACATGCCCACCAAC 60.979 63.158 0.00 0.00 0.00 3.77
4972 6104 2.440147 CCTCCACATGCCCACCAA 59.560 61.111 0.00 0.00 0.00 3.67
4973 6105 2.858476 ACCTCCACATGCCCACCA 60.858 61.111 0.00 0.00 0.00 4.17
4974 6106 2.361610 CACCTCCACATGCCCACC 60.362 66.667 0.00 0.00 0.00 4.61
4975 6107 1.973281 CACACCTCCACATGCCCAC 60.973 63.158 0.00 0.00 0.00 4.61
4976 6108 2.410322 GACACACCTCCACATGCCCA 62.410 60.000 0.00 0.00 0.00 5.36
4977 6109 1.675641 GACACACCTCCACATGCCC 60.676 63.158 0.00 0.00 0.00 5.36
4978 6110 0.674895 GAGACACACCTCCACATGCC 60.675 60.000 0.00 0.00 0.00 4.40
4979 6111 2.846371 GAGACACACCTCCACATGC 58.154 57.895 0.00 0.00 0.00 4.06
4986 6118 4.436998 CCGCCGGAGACACACCTC 62.437 72.222 5.05 0.00 0.00 3.85
4987 6119 4.988716 TCCGCCGGAGACACACCT 62.989 66.667 5.05 0.00 0.00 4.00
4988 6120 3.718210 GATCCGCCGGAGACACACC 62.718 68.421 13.12 0.00 34.05 4.16
4989 6121 1.381928 TAGATCCGCCGGAGACACAC 61.382 60.000 13.12 0.00 34.05 3.82
4990 6122 0.467474 ATAGATCCGCCGGAGACACA 60.467 55.000 13.12 1.27 34.05 3.72
4991 6123 0.241481 GATAGATCCGCCGGAGACAC 59.759 60.000 13.12 3.15 34.05 3.67
4992 6124 0.110678 AGATAGATCCGCCGGAGACA 59.889 55.000 13.12 0.00 34.05 3.41
4993 6125 1.249407 AAGATAGATCCGCCGGAGAC 58.751 55.000 13.12 8.53 34.05 3.36
4994 6126 1.613925 CAAAGATAGATCCGCCGGAGA 59.386 52.381 13.12 0.00 34.05 3.71
4995 6127 1.337260 CCAAAGATAGATCCGCCGGAG 60.337 57.143 13.12 0.00 34.05 4.63
4996 6128 0.679505 CCAAAGATAGATCCGCCGGA 59.320 55.000 8.97 8.97 35.55 5.14
4997 6129 0.393077 ACCAAAGATAGATCCGCCGG 59.607 55.000 0.00 0.00 0.00 6.13
4998 6130 2.557056 TCTACCAAAGATAGATCCGCCG 59.443 50.000 0.00 0.00 0.00 6.46
4999 6131 4.810191 ATCTACCAAAGATAGATCCGCC 57.190 45.455 0.00 0.00 43.45 6.13
5000 6132 5.106908 GCAAATCTACCAAAGATAGATCCGC 60.107 44.000 0.00 0.00 44.56 5.54
5001 6133 6.226787 AGCAAATCTACCAAAGATAGATCCG 58.773 40.000 0.00 0.00 44.56 4.18
5002 6134 6.367422 CGAGCAAATCTACCAAAGATAGATCC 59.633 42.308 0.00 0.00 44.56 3.36
5003 6135 6.367422 CCGAGCAAATCTACCAAAGATAGATC 59.633 42.308 0.00 0.00 44.56 2.75
5004 6136 6.042093 TCCGAGCAAATCTACCAAAGATAGAT 59.958 38.462 0.00 0.00 44.56 1.98
5005 6137 5.362717 TCCGAGCAAATCTACCAAAGATAGA 59.637 40.000 0.00 0.00 44.56 1.98
5006 6138 5.601662 TCCGAGCAAATCTACCAAAGATAG 58.398 41.667 0.00 0.00 44.56 2.08
5007 6139 5.607939 TCCGAGCAAATCTACCAAAGATA 57.392 39.130 0.00 0.00 44.56 1.98
5009 6141 3.973206 TCCGAGCAAATCTACCAAAGA 57.027 42.857 0.00 0.00 39.02 2.52
5010 6142 4.446371 AGATCCGAGCAAATCTACCAAAG 58.554 43.478 0.00 0.00 30.50 2.77
5011 6143 4.442706 GAGATCCGAGCAAATCTACCAAA 58.557 43.478 0.00 0.00 32.43 3.28
5012 6144 3.490933 CGAGATCCGAGCAAATCTACCAA 60.491 47.826 0.00 0.00 41.76 3.67
5013 6145 2.034685 CGAGATCCGAGCAAATCTACCA 59.965 50.000 0.00 0.00 41.76 3.25
5014 6146 2.034812 ACGAGATCCGAGCAAATCTACC 59.965 50.000 10.05 0.00 41.76 3.18
5015 6147 3.301706 GACGAGATCCGAGCAAATCTAC 58.698 50.000 10.05 0.00 41.76 2.59
5016 6148 2.031944 CGACGAGATCCGAGCAAATCTA 60.032 50.000 10.05 0.00 41.76 1.98
5017 6149 1.268794 CGACGAGATCCGAGCAAATCT 60.269 52.381 10.05 0.00 41.76 2.40
5018 6150 1.124462 CGACGAGATCCGAGCAAATC 58.876 55.000 10.05 0.00 41.76 2.17
5019 6151 0.456221 ACGACGAGATCCGAGCAAAT 59.544 50.000 0.00 0.00 41.76 2.32
5020 6152 0.242825 AACGACGAGATCCGAGCAAA 59.757 50.000 0.00 0.00 41.76 3.68
5021 6153 1.089112 TAACGACGAGATCCGAGCAA 58.911 50.000 0.00 0.00 41.76 3.91
5022 6154 1.306148 ATAACGACGAGATCCGAGCA 58.694 50.000 0.00 0.00 41.76 4.26
5023 6155 2.308811 GAATAACGACGAGATCCGAGC 58.691 52.381 0.00 2.24 41.76 5.03
5024 6156 2.033065 ACGAATAACGACGAGATCCGAG 60.033 50.000 0.00 6.49 45.77 4.63
5025 6157 1.935873 ACGAATAACGACGAGATCCGA 59.064 47.619 0.00 0.00 45.77 4.55
5026 6158 2.034789 CACGAATAACGACGAGATCCG 58.965 52.381 0.00 2.02 45.77 4.18
5027 6159 3.062323 ACACGAATAACGACGAGATCC 57.938 47.619 0.00 0.00 45.77 3.36
5028 6160 3.652216 CGTACACGAATAACGACGAGATC 59.348 47.826 0.00 0.00 45.77 2.75
5029 6161 3.062639 ACGTACACGAATAACGACGAGAT 59.937 43.478 9.04 0.00 45.77 2.75
5030 6162 2.411748 ACGTACACGAATAACGACGAGA 59.588 45.455 9.04 0.00 45.77 4.04
5031 6163 2.762472 ACGTACACGAATAACGACGAG 58.238 47.619 9.04 0.00 45.77 4.18
5032 6164 2.873170 ACGTACACGAATAACGACGA 57.127 45.000 9.04 0.00 45.77 4.20
5033 6165 2.038193 CGAACGTACACGAATAACGACG 60.038 50.000 9.04 0.00 45.77 5.12
5034 6166 2.902484 ACGAACGTACACGAATAACGAC 59.098 45.455 9.04 4.72 45.77 4.34
5035 6167 2.901873 CACGAACGTACACGAATAACGA 59.098 45.455 9.04 0.00 45.77 3.85
5037 6169 3.421888 ACACACGAACGTACACGAATAAC 59.578 43.478 9.04 0.00 43.02 1.89
5038 6170 3.626977 ACACACGAACGTACACGAATAA 58.373 40.909 9.04 0.00 43.02 1.40
5039 6171 3.058983 AGACACACGAACGTACACGAATA 60.059 43.478 9.04 0.00 43.02 1.75
5040 6172 2.046313 GACACACGAACGTACACGAAT 58.954 47.619 9.04 0.00 43.02 3.34
5041 6173 1.063912 AGACACACGAACGTACACGAA 59.936 47.619 9.04 0.00 43.02 3.85
5042 6174 0.657312 AGACACACGAACGTACACGA 59.343 50.000 9.04 0.00 43.02 4.35
5043 6175 1.445731 GAAGACACACGAACGTACACG 59.554 52.381 0.00 0.00 46.33 4.49
5044 6176 1.445731 CGAAGACACACGAACGTACAC 59.554 52.381 0.00 0.00 0.00 2.90
5045 6177 1.597690 CCGAAGACACACGAACGTACA 60.598 52.381 0.00 0.00 0.00 2.90
5046 6178 1.047739 CCGAAGACACACGAACGTAC 58.952 55.000 0.00 0.00 0.00 3.67
5047 6179 0.040157 CCCGAAGACACACGAACGTA 60.040 55.000 0.00 0.00 0.00 3.57
5048 6180 1.299620 CCCGAAGACACACGAACGT 60.300 57.895 0.00 0.00 0.00 3.99
5049 6181 1.273455 GACCCGAAGACACACGAACG 61.273 60.000 0.00 0.00 0.00 3.95
5050 6182 1.273455 CGACCCGAAGACACACGAAC 61.273 60.000 0.00 0.00 0.00 3.95
5051 6183 1.008194 CGACCCGAAGACACACGAA 60.008 57.895 0.00 0.00 0.00 3.85
5052 6184 1.446516 TTCGACCCGAAGACACACGA 61.447 55.000 0.00 0.00 41.05 4.35
5053 6185 1.008194 TTCGACCCGAAGACACACG 60.008 57.895 0.00 0.00 41.05 4.49
5065 6197 7.348524 TAACGTAGGTTGGAAGGATTCGACC 62.349 48.000 10.99 5.88 46.24 4.79
5066 6198 4.380867 TAACGTAGGTTGGAAGGATTCGAC 60.381 45.833 10.99 0.00 40.94 4.20
5067 6199 3.763360 TAACGTAGGTTGGAAGGATTCGA 59.237 43.478 10.99 0.00 40.94 3.71
5068 6200 4.114058 TAACGTAGGTTGGAAGGATTCG 57.886 45.455 10.99 0.00 40.94 3.34
5069 6201 6.346896 AGAATAACGTAGGTTGGAAGGATTC 58.653 40.000 10.99 10.16 40.01 2.52
5070 6202 6.309389 AGAATAACGTAGGTTGGAAGGATT 57.691 37.500 10.99 1.75 36.90 3.01
5071 6203 5.952347 AGAATAACGTAGGTTGGAAGGAT 57.048 39.130 10.99 0.00 36.90 3.24
5072 6204 5.246656 TGAAGAATAACGTAGGTTGGAAGGA 59.753 40.000 10.99 0.00 36.90 3.36
5073 6205 5.484715 TGAAGAATAACGTAGGTTGGAAGG 58.515 41.667 10.99 0.00 36.90 3.46
5074 6206 6.019801 CGATGAAGAATAACGTAGGTTGGAAG 60.020 42.308 10.99 0.00 36.90 3.46
5075 6207 5.808540 CGATGAAGAATAACGTAGGTTGGAA 59.191 40.000 10.99 0.00 36.90 3.53
5076 6208 5.345702 CGATGAAGAATAACGTAGGTTGGA 58.654 41.667 10.99 0.00 36.90 3.53
5077 6209 4.506654 CCGATGAAGAATAACGTAGGTTGG 59.493 45.833 10.99 0.00 36.90 3.77
5078 6210 5.005394 CACCGATGAAGAATAACGTAGGTTG 59.995 44.000 10.99 0.00 36.90 3.77
5079 6211 5.107133 CACCGATGAAGAATAACGTAGGTT 58.893 41.667 6.03 6.03 40.20 3.50
5080 6212 4.441079 CCACCGATGAAGAATAACGTAGGT 60.441 45.833 0.00 0.00 32.80 3.08
5081 6213 4.049186 CCACCGATGAAGAATAACGTAGG 58.951 47.826 0.00 0.00 0.00 3.18
5082 6214 3.489785 GCCACCGATGAAGAATAACGTAG 59.510 47.826 0.00 0.00 0.00 3.51
5083 6215 3.450578 GCCACCGATGAAGAATAACGTA 58.549 45.455 0.00 0.00 0.00 3.57
5084 6216 2.277084 GCCACCGATGAAGAATAACGT 58.723 47.619 0.00 0.00 0.00 3.99
5085 6217 1.257936 CGCCACCGATGAAGAATAACG 59.742 52.381 0.00 0.00 36.29 3.18
5086 6218 1.597663 CCGCCACCGATGAAGAATAAC 59.402 52.381 0.00 0.00 36.29 1.89
5087 6219 1.208535 ACCGCCACCGATGAAGAATAA 59.791 47.619 0.00 0.00 36.29 1.40
5088 6220 0.828022 ACCGCCACCGATGAAGAATA 59.172 50.000 0.00 0.00 36.29 1.75
5089 6221 0.035439 AACCGCCACCGATGAAGAAT 60.035 50.000 0.00 0.00 36.29 2.40
5090 6222 0.953471 CAACCGCCACCGATGAAGAA 60.953 55.000 0.00 0.00 36.29 2.52
5091 6223 1.375396 CAACCGCCACCGATGAAGA 60.375 57.895 0.00 0.00 36.29 2.87
5092 6224 3.039202 GCAACCGCCACCGATGAAG 62.039 63.158 0.00 0.00 36.29 3.02
5093 6225 3.053291 GCAACCGCCACCGATGAA 61.053 61.111 0.00 0.00 36.29 2.57
5094 6226 4.015406 AGCAACCGCCACCGATGA 62.015 61.111 0.00 0.00 39.83 2.92
5095 6227 3.803082 CAGCAACCGCCACCGATG 61.803 66.667 0.00 0.00 39.83 3.84
5096 6228 3.842925 AACAGCAACCGCCACCGAT 62.843 57.895 0.00 0.00 39.83 4.18
5097 6229 4.555709 AACAGCAACCGCCACCGA 62.556 61.111 0.00 0.00 39.83 4.69
5098 6230 4.025401 GAACAGCAACCGCCACCG 62.025 66.667 0.00 0.00 39.83 4.94
5099 6231 2.594592 AGAACAGCAACCGCCACC 60.595 61.111 0.00 0.00 39.83 4.61
5100 6232 2.639286 CAGAACAGCAACCGCCAC 59.361 61.111 0.00 0.00 39.83 5.01
5101 6233 2.594303 CCAGAACAGCAACCGCCA 60.594 61.111 0.00 0.00 39.83 5.69
5102 6234 2.594592 ACCAGAACAGCAACCGCC 60.595 61.111 0.00 0.00 39.83 6.13
5103 6235 2.639286 CACCAGAACAGCAACCGC 59.361 61.111 0.00 0.00 38.99 5.68
5104 6236 2.186160 TGCACCAGAACAGCAACCG 61.186 57.895 0.00 0.00 34.97 4.44
5105 6237 1.103398 AGTGCACCAGAACAGCAACC 61.103 55.000 14.63 0.00 40.35 3.77
5106 6238 0.029834 CAGTGCACCAGAACAGCAAC 59.970 55.000 14.63 0.00 40.35 4.17
5107 6239 1.102809 CCAGTGCACCAGAACAGCAA 61.103 55.000 14.63 0.00 40.35 3.91
5108 6240 1.526686 CCAGTGCACCAGAACAGCA 60.527 57.895 14.63 0.00 35.63 4.41
5109 6241 1.510480 GACCAGTGCACCAGAACAGC 61.510 60.000 14.63 0.00 0.00 4.40
5110 6242 0.886490 GGACCAGTGCACCAGAACAG 60.886 60.000 14.63 0.00 0.00 3.16
5111 6243 1.148273 GGACCAGTGCACCAGAACA 59.852 57.895 14.63 0.00 0.00 3.18
5112 6244 0.685097 TAGGACCAGTGCACCAGAAC 59.315 55.000 14.63 1.45 0.00 3.01
5113 6245 1.278985 CATAGGACCAGTGCACCAGAA 59.721 52.381 14.63 0.00 0.00 3.02
5114 6246 0.904649 CATAGGACCAGTGCACCAGA 59.095 55.000 14.63 0.00 0.00 3.86
5115 6247 0.107508 CCATAGGACCAGTGCACCAG 60.108 60.000 14.63 7.78 0.00 4.00
5116 6248 1.561769 CCCATAGGACCAGTGCACCA 61.562 60.000 14.63 0.00 33.47 4.17
5117 6249 1.224592 CCCATAGGACCAGTGCACC 59.775 63.158 14.63 0.00 33.47 5.01
5118 6250 1.224592 CCCCATAGGACCAGTGCAC 59.775 63.158 9.40 9.40 38.24 4.57
5119 6251 2.679342 GCCCCATAGGACCAGTGCA 61.679 63.158 0.00 0.00 38.24 4.57
5120 6252 2.193248 GCCCCATAGGACCAGTGC 59.807 66.667 0.00 0.00 38.24 4.40
5121 6253 2.919043 GGCCCCATAGGACCAGTG 59.081 66.667 0.00 0.00 37.96 3.66
5127 6259 1.407656 CGTGCTAAGGCCCCATAGGA 61.408 60.000 0.00 0.00 38.24 2.94
5128 6260 1.071471 CGTGCTAAGGCCCCATAGG 59.929 63.158 0.00 0.00 37.74 2.57
5129 6261 0.249911 GTCGTGCTAAGGCCCCATAG 60.250 60.000 0.00 0.67 37.74 2.23
5130 6262 1.827394 GTCGTGCTAAGGCCCCATA 59.173 57.895 0.00 0.00 37.74 2.74
5131 6263 2.590092 GTCGTGCTAAGGCCCCAT 59.410 61.111 0.00 0.00 37.74 4.00
5132 6264 4.077184 CGTCGTGCTAAGGCCCCA 62.077 66.667 0.00 0.00 37.74 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.