Multiple sequence alignment - TraesCS5D01G359600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G359600 chr5D 100.000 4181 0 0 1 4181 438776310 438780490 0.000000e+00 7721.0
1 TraesCS5D01G359600 chr5D 86.519 675 56 19 2626 3283 438822507 438823163 0.000000e+00 710.0
2 TraesCS5D01G359600 chr5D 82.965 317 27 15 3028 3339 438919188 438919482 1.150000e-65 261.0
3 TraesCS5D01G359600 chr5D 82.684 231 19 14 3086 3301 438826217 438826441 7.140000e-43 185.0
4 TraesCS5D01G359600 chr5D 79.048 210 33 7 2543 2743 438918812 438919019 2.620000e-27 134.0
5 TraesCS5D01G359600 chr5D 91.026 78 6 1 3687 3763 438823221 438823298 2.060000e-18 104.0
6 TraesCS5D01G359600 chr5D 95.000 40 2 0 2806 2845 287864303 287864264 3.490000e-06 63.9
7 TraesCS5D01G359600 chr5B 86.918 1697 109 63 422 2077 533747524 533749148 0.000000e+00 1799.0
8 TraesCS5D01G359600 chr5B 87.657 1037 84 24 2349 3360 533749509 533750526 0.000000e+00 1166.0
9 TraesCS5D01G359600 chr5B 84.381 493 42 21 2877 3360 533976235 533976701 6.370000e-123 451.0
10 TraesCS5D01G359600 chr5B 83.904 292 37 4 128 419 533747269 533747550 1.920000e-68 270.0
11 TraesCS5D01G359600 chr5B 78.395 486 51 23 3598 4051 533750763 533751226 2.480000e-67 267.0
12 TraesCS5D01G359600 chr5B 86.503 163 18 4 2131 2290 533749148 533749309 4.300000e-40 176.0
13 TraesCS5D01G359600 chr5B 79.365 252 37 6 1733 1981 24168173 24167934 3.340000e-36 163.0
14 TraesCS5D01G359600 chr5B 78.571 252 39 6 1733 1981 688765628 688765389 7.240000e-33 152.0
15 TraesCS5D01G359600 chr5B 95.652 92 3 1 34 124 533747082 533747173 3.370000e-31 147.0
16 TraesCS5D01G359600 chr5B 93.651 63 4 0 150 212 533746168 533746230 1.240000e-15 95.3
17 TraesCS5D01G359600 chr5B 97.500 40 1 0 2881 2920 533974377 533974338 7.500000e-08 69.4
18 TraesCS5D01G359600 chr5A 85.804 1430 141 27 1975 3360 554286733 554288144 0.000000e+00 1459.0
19 TraesCS5D01G359600 chr5A 85.440 1250 85 53 776 1975 554285498 554286700 0.000000e+00 1210.0
20 TraesCS5D01G359600 chr5A 83.784 370 33 13 3051 3403 554335550 554335909 4.030000e-85 326.0
21 TraesCS5D01G359600 chr5A 83.438 320 37 9 2698 3016 554335246 554335550 2.460000e-72 283.0
22 TraesCS5D01G359600 chr5A 76.716 335 33 20 3598 3915 554288502 554288808 1.210000e-30 145.0
23 TraesCS5D01G359600 chr5A 73.803 355 58 18 2304 2649 116204627 116204955 1.590000e-19 108.0
24 TraesCS5D01G359600 chr5A 100.000 28 0 0 41 68 187468926 187468953 8.000000e-03 52.8
25 TraesCS5D01G359600 chr3B 82.375 783 74 37 1202 1981 739244070 739243349 1.280000e-174 623.0
26 TraesCS5D01G359600 chr3B 78.549 317 38 17 1750 2051 87709856 87709555 9.230000e-42 182.0
27 TraesCS5D01G359600 chr3B 88.350 103 12 0 2384 2486 118815034 118814932 1.580000e-24 124.0
28 TraesCS5D01G359600 chr3B 95.000 40 2 0 2806 2845 24845865 24845826 3.490000e-06 63.9
29 TraesCS5D01G359600 chr6D 82.595 632 61 23 1232 1859 246425134 246424548 2.880000e-141 512.0
30 TraesCS5D01G359600 chr6D 78.431 306 48 15 2362 2661 2174846 2174553 2.570000e-42 183.0
31 TraesCS5D01G359600 chr6D 78.431 306 48 15 2362 2661 2181005 2180712 2.570000e-42 183.0
32 TraesCS5D01G359600 chr1D 82.250 631 69 22 1232 1859 429424983 429424393 4.820000e-139 505.0
33 TraesCS5D01G359600 chr6A 82.877 584 67 22 1280 1859 14538201 14537647 1.040000e-135 494.0
34 TraesCS5D01G359600 chr6A 82.021 584 73 20 1280 1859 227542830 227542275 6.330000e-128 468.0
35 TraesCS5D01G359600 chr6A 72.937 521 95 30 2150 2643 407126303 407126804 5.640000e-29 139.0
36 TraesCS5D01G359600 chr6B 82.401 608 61 25 1232 1835 41242572 41243137 4.860000e-134 488.0
37 TraesCS5D01G359600 chr6B 80.072 552 65 27 1232 1780 81735057 81735566 6.600000e-98 368.0
38 TraesCS5D01G359600 chr6B 77.507 369 41 25 1151 1519 471040147 471039821 2.570000e-42 183.0
39 TraesCS5D01G359600 chr6B 72.316 531 89 31 2138 2644 686924535 686925031 3.420000e-21 113.0
40 TraesCS5D01G359600 chrUn 82.072 608 63 25 1232 1835 337811078 337810513 1.050000e-130 477.0
41 TraesCS5D01G359600 chrUn 78.431 306 48 15 2362 2661 296590225 296589932 2.570000e-42 183.0
42 TraesCS5D01G359600 chrUn 88.350 103 12 0 2384 2486 3174456 3174354 1.580000e-24 124.0
43 TraesCS5D01G359600 chr4D 81.141 631 74 23 1232 1859 486209964 486209376 8.190000e-127 464.0
44 TraesCS5D01G359600 chr4D 84.647 241 20 10 1259 1487 132569170 132569405 1.510000e-54 224.0
45 TraesCS5D01G359600 chr4D 80.556 252 34 6 1733 1981 132569952 132570191 3.320000e-41 180.0
46 TraesCS5D01G359600 chr4D 97.500 40 1 0 2806 2845 500896367 500896328 7.500000e-08 69.4
47 TraesCS5D01G359600 chr4D 95.000 40 2 0 2806 2845 457300236 457300197 3.490000e-06 63.9
48 TraesCS5D01G359600 chr4B 87.278 338 34 5 2967 3302 625312812 625312482 1.100000e-100 377.0
49 TraesCS5D01G359600 chr4B 85.714 133 9 7 3372 3498 625312481 625312353 9.430000e-27 132.0
50 TraesCS5D01G359600 chr4B 88.312 77 8 1 1976 2051 608367608 608367532 1.600000e-14 91.6
51 TraesCS5D01G359600 chr2D 80.256 547 63 28 1232 1775 581857887 581857383 1.840000e-98 370.0
52 TraesCS5D01G359600 chr2A 79.781 549 63 33 1231 1775 608487619 608488123 5.140000e-94 355.0
53 TraesCS5D01G359600 chr2A 78.136 558 66 33 1232 1775 695182931 695183446 1.890000e-78 303.0
54 TraesCS5D01G359600 chr2A 75.710 317 40 14 1753 2047 685529321 685529622 1.580000e-24 124.0
55 TraesCS5D01G359600 chr2B 82.135 431 46 14 1205 1633 47006581 47006180 1.440000e-89 340.0
56 TraesCS5D01G359600 chr2B 78.968 252 38 6 1733 1981 771210778 771211017 1.560000e-34 158.0
57 TraesCS5D01G359600 chr2B 86.408 103 14 0 2384 2486 752904099 752904201 3.420000e-21 113.0
58 TraesCS5D01G359600 chr2B 77.604 192 30 4 2305 2486 252093983 252094171 2.060000e-18 104.0
59 TraesCS5D01G359600 chr2B 90.909 77 6 1 1976 2051 795857572 795857648 7.400000e-18 102.0
60 TraesCS5D01G359600 chr2B 89.610 77 7 1 1976 2051 50581584 50581508 3.440000e-16 97.1
61 TraesCS5D01G359600 chr4A 79.235 549 64 34 1232 1775 484368955 484369458 1.860000e-88 337.0
62 TraesCS5D01G359600 chr4A 78.968 252 38 6 1733 1981 707727530 707727769 1.560000e-34 158.0
63 TraesCS5D01G359600 chr4A 73.410 346 57 19 2308 2644 467937541 467937222 3.440000e-16 97.1
64 TraesCS5D01G359600 chr7D 86.307 241 17 9 1259 1487 455877699 455877463 8.980000e-62 248.0
65 TraesCS5D01G359600 chr7D 78.694 291 46 14 2362 2649 191116977 191117254 3.320000e-41 180.0
66 TraesCS5D01G359600 chr3D 85.062 241 20 9 1259 1487 585811756 585811520 9.040000e-57 231.0
67 TraesCS5D01G359600 chr3D 77.035 344 42 8 1733 2051 585810974 585810643 3.340000e-36 163.0
68 TraesCS5D01G359600 chr3D 78.571 252 39 6 1733 1981 464892985 464892746 7.240000e-33 152.0
69 TraesCS5D01G359600 chr3D 73.761 343 56 18 2304 2638 231220553 231220869 2.060000e-18 104.0
70 TraesCS5D01G359600 chr7B 74.809 524 82 31 2138 2645 716660491 716660980 1.530000e-44 191.0
71 TraesCS5D01G359600 chr7A 81.383 188 27 7 2795 2978 559987531 559987714 3.370000e-31 147.0
72 TraesCS5D01G359600 chr1B 76.489 319 42 19 1750 2051 39264249 39264551 4.360000e-30 143.0
73 TraesCS5D01G359600 chr1B 75.000 308 49 17 2138 2429 43536989 43537284 2.640000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G359600 chr5D 438776310 438780490 4180 False 7721.000000 7721 100.000000 1 4181 1 chr5D.!!$F1 4180
1 TraesCS5D01G359600 chr5D 438822507 438826441 3934 False 333.000000 710 86.743000 2626 3763 3 chr5D.!!$F2 1137
2 TraesCS5D01G359600 chr5B 533746168 533751226 5058 False 560.042857 1799 87.525714 34 4051 7 chr5B.!!$F2 4017
3 TraesCS5D01G359600 chr5A 554285498 554288808 3310 False 938.000000 1459 82.653333 776 3915 3 chr5A.!!$F3 3139
4 TraesCS5D01G359600 chr5A 554335246 554335909 663 False 304.500000 326 83.611000 2698 3403 2 chr5A.!!$F4 705
5 TraesCS5D01G359600 chr3B 739243349 739244070 721 True 623.000000 623 82.375000 1202 1981 1 chr3B.!!$R4 779
6 TraesCS5D01G359600 chr6D 246424548 246425134 586 True 512.000000 512 82.595000 1232 1859 1 chr6D.!!$R3 627
7 TraesCS5D01G359600 chr1D 429424393 429424983 590 True 505.000000 505 82.250000 1232 1859 1 chr1D.!!$R1 627
8 TraesCS5D01G359600 chr6A 14537647 14538201 554 True 494.000000 494 82.877000 1280 1859 1 chr6A.!!$R1 579
9 TraesCS5D01G359600 chr6A 227542275 227542830 555 True 468.000000 468 82.021000 1280 1859 1 chr6A.!!$R2 579
10 TraesCS5D01G359600 chr6B 41242572 41243137 565 False 488.000000 488 82.401000 1232 1835 1 chr6B.!!$F1 603
11 TraesCS5D01G359600 chr6B 81735057 81735566 509 False 368.000000 368 80.072000 1232 1780 1 chr6B.!!$F2 548
12 TraesCS5D01G359600 chrUn 337810513 337811078 565 True 477.000000 477 82.072000 1232 1835 1 chrUn.!!$R3 603
13 TraesCS5D01G359600 chr4D 486209376 486209964 588 True 464.000000 464 81.141000 1232 1859 1 chr4D.!!$R2 627
14 TraesCS5D01G359600 chr4D 132569170 132570191 1021 False 202.000000 224 82.601500 1259 1981 2 chr4D.!!$F1 722
15 TraesCS5D01G359600 chr2D 581857383 581857887 504 True 370.000000 370 80.256000 1232 1775 1 chr2D.!!$R1 543
16 TraesCS5D01G359600 chr2A 608487619 608488123 504 False 355.000000 355 79.781000 1231 1775 1 chr2A.!!$F1 544
17 TraesCS5D01G359600 chr2A 695182931 695183446 515 False 303.000000 303 78.136000 1232 1775 1 chr2A.!!$F3 543
18 TraesCS5D01G359600 chr4A 484368955 484369458 503 False 337.000000 337 79.235000 1232 1775 1 chr4A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
594 1575 0.037326 TTCCTGCACAGAAGGCGTAG 60.037 55.0 0.00 0.00 34.56 3.51 F
657 1638 0.038526 AAAACTGAGACGCGTCCGAT 60.039 50.0 34.08 17.68 38.29 4.18 F
1129 2127 0.171455 ACGCCAGTTCGTCAGAGATC 59.829 55.0 0.00 0.00 38.44 2.75 F
1537 2594 0.984230 TCGATTCCTGCTGTTTCCCT 59.016 50.0 0.00 0.00 0.00 4.20 F
2563 4249 0.987294 AGCATTGTGGTACTGAGCCT 59.013 50.0 0.00 0.00 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2360 4045 0.237235 ACAAATGTTAGTGCGGTGCG 59.763 50.0 0.0 0.0 0.00 5.34 R
2544 4229 0.987294 AGGCTCAGTACCACAATGCT 59.013 50.0 0.0 0.0 0.00 3.79 R
2987 4698 0.032117 TCACCACTCCGATCCAGGAT 60.032 55.0 0.0 0.0 39.96 3.24 R
3018 4729 0.759346 GGACCCTACAGCCTACATGG 59.241 60.0 0.0 0.0 39.35 3.66 R
3644 5566 0.036732 CCAACTACAGGCAGGCTTCA 59.963 55.0 0.0 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.599047 CCATCTCCGTGCCAGAAGT 59.401 57.895 0.00 0.00 0.00 3.01
19 20 0.460987 CCATCTCCGTGCCAGAAGTC 60.461 60.000 0.00 0.00 0.00 3.01
22 23 1.176619 TCTCCGTGCCAGAAGTCGAA 61.177 55.000 0.00 0.00 0.00 3.71
23 24 0.734253 CTCCGTGCCAGAAGTCGAAG 60.734 60.000 0.00 0.00 0.00 3.79
25 26 0.319555 CCGTGCCAGAAGTCGAAGAA 60.320 55.000 0.00 0.00 39.69 2.52
27 28 1.335964 CGTGCCAGAAGTCGAAGAAGA 60.336 52.381 0.00 0.00 39.69 2.87
29 30 1.335964 TGCCAGAAGTCGAAGAAGACG 60.336 52.381 0.00 0.00 45.26 4.18
30 31 1.068472 GCCAGAAGTCGAAGAAGACGA 60.068 52.381 0.00 0.00 45.26 4.20
31 32 2.607282 GCCAGAAGTCGAAGAAGACGAA 60.607 50.000 0.00 0.00 45.26 3.85
32 33 3.639538 CCAGAAGTCGAAGAAGACGAAA 58.360 45.455 0.00 0.00 45.26 3.46
33 34 4.049186 CCAGAAGTCGAAGAAGACGAAAA 58.951 43.478 0.00 0.00 45.26 2.29
34 35 4.686554 CCAGAAGTCGAAGAAGACGAAAAT 59.313 41.667 0.00 0.00 45.26 1.82
35 36 5.388890 CCAGAAGTCGAAGAAGACGAAAATG 60.389 44.000 0.00 0.00 45.26 2.32
36 37 5.175856 CAGAAGTCGAAGAAGACGAAAATGT 59.824 40.000 0.00 0.00 45.26 2.71
37 38 4.974103 AGTCGAAGAAGACGAAAATGTG 57.026 40.909 0.00 0.00 45.26 3.21
48 930 4.755123 AGACGAAAATGTGTAGTCCCAAAG 59.245 41.667 0.00 0.00 32.70 2.77
78 960 0.392998 CTGTCGTGGGGAAATCCTGG 60.393 60.000 0.00 0.00 35.95 4.45
86 968 2.409870 GGAAATCCTGGCAGCACGG 61.410 63.158 9.56 0.00 0.00 4.94
124 1007 1.432270 GCTGAATCACGCTAGGCACC 61.432 60.000 0.00 0.00 0.00 5.01
125 1008 0.176680 CTGAATCACGCTAGGCACCT 59.823 55.000 0.00 0.00 0.00 4.00
126 1009 1.409064 CTGAATCACGCTAGGCACCTA 59.591 52.381 0.00 0.00 0.00 3.08
139 1114 3.658725 AGGCACCTAGATGTCAGGTTAT 58.341 45.455 0.00 0.00 44.18 1.89
192 1167 1.580845 ATGGCTTGTCAAGAGTGCGC 61.581 55.000 16.99 0.00 0.00 6.09
194 1169 2.253758 GCTTGTCAAGAGTGCGCCA 61.254 57.895 16.99 0.00 0.00 5.69
208 1183 1.149174 CGCCAGCACCCCATATTCT 59.851 57.895 0.00 0.00 0.00 2.40
216 1191 0.391597 ACCCCATATTCTACGCCACG 59.608 55.000 0.00 0.00 0.00 4.94
217 1192 0.949105 CCCCATATTCTACGCCACGC 60.949 60.000 0.00 0.00 0.00 5.34
220 1195 1.139989 CATATTCTACGCCACGCCAG 58.860 55.000 0.00 0.00 0.00 4.85
239 1214 4.923871 GCCAGACACCATAACTATATGACG 59.076 45.833 0.00 0.00 41.25 4.35
241 1216 5.920840 CCAGACACCATAACTATATGACGTG 59.079 44.000 0.00 1.78 41.25 4.49
252 1227 3.838244 ATATGACGTGTGCCAAGGTAT 57.162 42.857 0.00 0.00 0.00 2.73
253 1228 1.737838 ATGACGTGTGCCAAGGTATG 58.262 50.000 0.00 0.00 0.00 2.39
287 1262 0.669625 GCTTCGGTTACTGCTTCCGT 60.670 55.000 0.00 0.00 43.94 4.69
299 1274 1.134220 TGCTTCCGTCTGTTCCACTTT 60.134 47.619 0.00 0.00 0.00 2.66
300 1275 1.947456 GCTTCCGTCTGTTCCACTTTT 59.053 47.619 0.00 0.00 0.00 2.27
328 1303 1.881252 CGAATAGGCAACCCCGTCG 60.881 63.158 0.00 0.00 39.21 5.12
329 1304 1.219935 GAATAGGCAACCCCGTCGT 59.780 57.895 0.00 0.00 39.21 4.34
330 1305 0.392060 GAATAGGCAACCCCGTCGTT 60.392 55.000 0.00 0.00 39.21 3.85
335 1310 2.424302 CAACCCCGTCGTTGACCT 59.576 61.111 6.07 0.00 44.88 3.85
358 1333 4.503314 GCATGCCGGCTTGCTTCC 62.503 66.667 43.45 24.97 41.83 3.46
413 1388 6.531503 TTTTTATGGTTGTGTTTCTGGACA 57.468 33.333 0.00 0.00 0.00 4.02
414 1389 6.723298 TTTTATGGTTGTGTTTCTGGACAT 57.277 33.333 0.00 0.00 0.00 3.06
415 1390 5.703978 TTATGGTTGTGTTTCTGGACATG 57.296 39.130 0.00 0.00 0.00 3.21
416 1391 3.011566 TGGTTGTGTTTCTGGACATGT 57.988 42.857 0.00 0.00 0.00 3.21
417 1392 3.360867 TGGTTGTGTTTCTGGACATGTT 58.639 40.909 0.00 0.00 0.00 2.71
418 1393 3.766591 TGGTTGTGTTTCTGGACATGTTT 59.233 39.130 0.00 0.00 0.00 2.83
419 1394 4.221703 TGGTTGTGTTTCTGGACATGTTTT 59.778 37.500 0.00 0.00 0.00 2.43
420 1395 5.175127 GGTTGTGTTTCTGGACATGTTTTT 58.825 37.500 0.00 0.00 0.00 1.94
443 1418 6.531503 TTTTTATGGTTGTGTTTCTGGACA 57.468 33.333 0.00 0.00 0.00 4.02
450 1425 3.435105 TGTGTTTCTGGACATGTTTGC 57.565 42.857 0.00 0.00 0.00 3.68
453 1428 0.313672 TTTCTGGACATGTTTGCGCC 59.686 50.000 4.18 0.00 0.00 6.53
501 1477 0.986874 CGTTGCGACGCTTGAACTTG 60.987 55.000 22.08 2.10 43.03 3.16
516 1492 0.673644 ACTTGCTGTATGGCCGTGAC 60.674 55.000 8.05 0.47 0.00 3.67
536 1512 5.909610 GTGACGATTGCTCCATTTATAAAGC 59.090 40.000 3.94 2.19 35.31 3.51
545 1521 2.359531 CCATTTATAAAGCGGGGCGAAA 59.640 45.455 3.94 0.00 0.00 3.46
547 1523 1.381522 TTATAAAGCGGGGCGAAACC 58.618 50.000 0.00 0.00 37.93 3.27
558 1539 2.888998 GCGAAACCGGCGAGTGTTT 61.889 57.895 9.30 10.74 37.39 2.83
589 1570 0.524862 GCACATTCCTGCACAGAAGG 59.475 55.000 0.00 5.15 37.11 3.46
594 1575 0.037326 TTCCTGCACAGAAGGCGTAG 60.037 55.000 0.00 0.00 34.56 3.51
598 1579 1.805945 GCACAGAAGGCGTAGTCCG 60.806 63.158 0.00 0.00 40.40 4.79
638 1619 3.544772 TGGAACACGTCTCTGCCA 58.455 55.556 0.00 0.00 0.00 4.92
642 1623 1.002792 GGAACACGTCTCTGCCAAAAC 60.003 52.381 0.00 0.00 0.00 2.43
643 1624 1.940613 GAACACGTCTCTGCCAAAACT 59.059 47.619 0.00 0.00 0.00 2.66
655 1636 1.487231 CAAAACTGAGACGCGTCCG 59.513 57.895 34.08 24.18 41.14 4.79
657 1638 0.038526 AAAACTGAGACGCGTCCGAT 60.039 50.000 34.08 17.68 38.29 4.18
662 1643 1.583967 GAGACGCGTCCGATGACAG 60.584 63.158 34.08 0.00 41.85 3.51
664 1645 3.338126 GACGCGTCCGATGACAGGT 62.338 63.158 28.61 0.00 41.85 4.00
665 1646 2.880879 CGCGTCCGATGACAGGTG 60.881 66.667 0.00 0.00 41.85 4.00
670 1651 2.124983 CCGATGACAGGTGGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
690 1671 1.755380 GAAGAAGCTTCTACGCCCCTA 59.245 52.381 28.67 0.00 36.28 3.53
692 1673 1.063867 AGAAGCTTCTACGCCCCTAGA 60.064 52.381 27.47 0.00 35.34 2.43
699 1680 1.006281 TCTACGCCCCTAGACTTTCCA 59.994 52.381 0.00 0.00 0.00 3.53
724 1705 4.278513 CCAAACCGCCCCTGTCCA 62.279 66.667 0.00 0.00 0.00 4.02
731 1712 4.489771 GCCCCTGTCCACCCATCG 62.490 72.222 0.00 0.00 0.00 3.84
745 1726 1.503542 CATCGGAAAGCACAGGCAC 59.496 57.895 0.00 0.00 44.61 5.01
746 1727 1.073025 ATCGGAAAGCACAGGCACA 59.927 52.632 0.00 0.00 44.61 4.57
747 1728 0.957395 ATCGGAAAGCACAGGCACAG 60.957 55.000 0.00 0.00 44.61 3.66
748 1729 1.597854 CGGAAAGCACAGGCACAGA 60.598 57.895 0.00 0.00 44.61 3.41
749 1730 1.572085 CGGAAAGCACAGGCACAGAG 61.572 60.000 0.00 0.00 44.61 3.35
750 1731 0.250467 GGAAAGCACAGGCACAGAGA 60.250 55.000 0.00 0.00 44.61 3.10
751 1732 0.871057 GAAAGCACAGGCACAGAGAC 59.129 55.000 0.00 0.00 44.61 3.36
752 1733 0.536006 AAAGCACAGGCACAGAGACC 60.536 55.000 0.00 0.00 44.61 3.85
753 1734 1.699054 AAGCACAGGCACAGAGACCA 61.699 55.000 0.00 0.00 44.61 4.02
759 1740 2.551270 GCACAGAGACCAAACGCG 59.449 61.111 3.53 3.53 0.00 6.01
953 1948 3.721706 CAAGCTCCCGCCCCTTCT 61.722 66.667 0.00 0.00 36.60 2.85
1069 2067 4.475444 CCGCCTCCTCCCCACCTA 62.475 72.222 0.00 0.00 0.00 3.08
1070 2068 3.155167 CGCCTCCTCCCCACCTAC 61.155 72.222 0.00 0.00 0.00 3.18
1074 2072 2.542541 TCCTCCCCACCTACCCCT 60.543 66.667 0.00 0.00 0.00 4.79
1076 2074 2.444140 CTCCCCACCTACCCCTCG 60.444 72.222 0.00 0.00 0.00 4.63
1078 2076 4.798682 CCCCACCTACCCCTCGCT 62.799 72.222 0.00 0.00 0.00 4.93
1079 2077 3.155167 CCCACCTACCCCTCGCTC 61.155 72.222 0.00 0.00 0.00 5.03
1127 2125 1.285950 CACGCCAGTTCGTCAGAGA 59.714 57.895 0.00 0.00 41.21 3.10
1129 2127 0.171455 ACGCCAGTTCGTCAGAGATC 59.829 55.000 0.00 0.00 38.44 2.75
1154 2152 1.743995 CGGTTGGTTCCCCGTGATC 60.744 63.158 0.00 0.00 39.38 2.92
1166 2164 2.279120 GTGATCTCGGCCTCTGCG 60.279 66.667 0.00 0.00 38.85 5.18
1328 2343 1.203313 CGTTTCGTTTCCCGTGCTC 59.797 57.895 0.00 0.00 37.94 4.26
1329 2344 1.219522 CGTTTCGTTTCCCGTGCTCT 61.220 55.000 0.00 0.00 37.94 4.09
1380 2407 3.822167 GGGTTCTGATTCGGTTTGGTTTA 59.178 43.478 0.00 0.00 0.00 2.01
1389 2416 2.811431 TCGGTTTGGTTTACTGATGCTG 59.189 45.455 0.00 0.00 0.00 4.41
1405 2444 1.724582 GCTGTTTTCTGTGGCGGTGT 61.725 55.000 0.00 0.00 0.00 4.16
1497 2537 3.157881 TCTTCGTCTTCATGTCAGTCCT 58.842 45.455 0.00 0.00 0.00 3.85
1502 2542 1.079490 TCTTCATGTCAGTCCTCCCCT 59.921 52.381 0.00 0.00 0.00 4.79
1532 2589 1.160137 GTGCTTCGATTCCTGCTGTT 58.840 50.000 0.00 0.00 0.00 3.16
1533 2590 1.537202 GTGCTTCGATTCCTGCTGTTT 59.463 47.619 0.00 0.00 0.00 2.83
1534 2591 1.806542 TGCTTCGATTCCTGCTGTTTC 59.193 47.619 0.00 0.00 0.00 2.78
1535 2592 1.131315 GCTTCGATTCCTGCTGTTTCC 59.869 52.381 0.00 0.00 0.00 3.13
1536 2593 1.740025 CTTCGATTCCTGCTGTTTCCC 59.260 52.381 0.00 0.00 0.00 3.97
1537 2594 0.984230 TCGATTCCTGCTGTTTCCCT 59.016 50.000 0.00 0.00 0.00 4.20
1538 2595 1.089920 CGATTCCTGCTGTTTCCCTG 58.910 55.000 0.00 0.00 0.00 4.45
1728 3214 3.349006 CGAACTGTTGGCGCTGCT 61.349 61.111 7.64 0.00 0.00 4.24
1747 3237 1.815003 CTGAGATGGGTTTCCTTGTGC 59.185 52.381 0.00 0.00 0.00 4.57
1874 3365 1.075600 CTCCCCTCCCCTCTCTGTC 60.076 68.421 0.00 0.00 0.00 3.51
1936 3436 1.493950 GCTCGGCGATGTGATGGAAG 61.494 60.000 11.27 0.00 0.00 3.46
1973 3473 3.757493 TGTTGGTTTACTTGTTTCCGTGT 59.243 39.130 0.00 0.00 0.00 4.49
1974 3474 4.142643 TGTTGGTTTACTTGTTTCCGTGTC 60.143 41.667 0.00 0.00 0.00 3.67
1975 3475 3.607741 TGGTTTACTTGTTTCCGTGTCA 58.392 40.909 0.00 0.00 0.00 3.58
1976 3476 3.623960 TGGTTTACTTGTTTCCGTGTCAG 59.376 43.478 0.00 0.00 0.00 3.51
1977 3477 3.624410 GGTTTACTTGTTTCCGTGTCAGT 59.376 43.478 0.00 0.00 0.00 3.41
1978 3478 4.095334 GGTTTACTTGTTTCCGTGTCAGTT 59.905 41.667 0.00 0.00 0.00 3.16
1979 3479 5.392272 GGTTTACTTGTTTCCGTGTCAGTTT 60.392 40.000 0.00 0.00 0.00 2.66
1980 3480 3.757745 ACTTGTTTCCGTGTCAGTTTG 57.242 42.857 0.00 0.00 0.00 2.93
2085 3627 4.325472 GCAGTGCTGAAATGTAGAAATTGC 59.675 41.667 8.18 0.00 0.00 3.56
2086 3628 5.463286 CAGTGCTGAAATGTAGAAATTGCA 58.537 37.500 0.00 0.00 0.00 4.08
2093 3635 2.851263 TGTAGAAATTGCACGTCCCT 57.149 45.000 0.00 0.00 0.00 4.20
2159 3701 6.521133 GCGATTTAGTCTGTATATGCAATTGC 59.479 38.462 23.69 23.69 42.50 3.56
2241 3784 2.483877 TGTGCAGCCTCGTTAGAATTTG 59.516 45.455 0.00 0.00 0.00 2.32
2244 3787 4.332819 GTGCAGCCTCGTTAGAATTTGTAT 59.667 41.667 0.00 0.00 0.00 2.29
2245 3788 4.332543 TGCAGCCTCGTTAGAATTTGTATG 59.667 41.667 0.00 0.00 0.00 2.39
2246 3789 4.786609 GCAGCCTCGTTAGAATTTGTATGC 60.787 45.833 0.00 0.00 0.00 3.14
2268 3923 1.580439 CGTGCTCGTCAATTCAAACG 58.420 50.000 0.00 0.00 40.17 3.60
2270 3925 1.263217 GTGCTCGTCAATTCAAACGGT 59.737 47.619 5.11 0.00 39.31 4.83
2285 3940 2.281900 GGTTGCCCGTGCCTGTTA 60.282 61.111 0.00 0.00 36.33 2.41
2329 3997 7.148474 GCACGATTTGTTCAACTATTCCTCTTA 60.148 37.037 0.00 0.00 0.00 2.10
2332 4000 7.852945 CGATTTGTTCAACTATTCCTCTTATGC 59.147 37.037 0.00 0.00 0.00 3.14
2347 4032 4.780815 TCTTATGCTTGTGGTTATCCTGG 58.219 43.478 0.00 0.00 34.23 4.45
2356 4041 3.051341 TGTGGTTATCCTGGGACCTATCT 60.051 47.826 13.39 0.00 34.52 1.98
2360 4045 4.090819 GTTATCCTGGGACCTATCTCCTC 58.909 52.174 0.00 0.00 0.00 3.71
2381 4066 1.724654 GCACCGCACTAACATTTGTCG 60.725 52.381 0.00 0.00 0.00 4.35
2476 4161 2.961526 AGATCGACGCCTACAACAAT 57.038 45.000 0.00 0.00 0.00 2.71
2512 4197 1.381872 CTCCACATCCCCGTCCTCT 60.382 63.158 0.00 0.00 0.00 3.69
2513 4198 1.381327 TCCACATCCCCGTCCTCTC 60.381 63.158 0.00 0.00 0.00 3.20
2526 4211 2.328099 CCTCTCCAAACACAGCCGC 61.328 63.158 0.00 0.00 0.00 6.53
2541 4226 1.668294 CCGCCAGAACTGTCTCACT 59.332 57.895 1.18 0.00 28.78 3.41
2544 4229 1.269778 CGCCAGAACTGTCTCACTCAA 60.270 52.381 1.18 0.00 28.78 3.02
2545 4231 2.411904 GCCAGAACTGTCTCACTCAAG 58.588 52.381 1.18 0.00 28.78 3.02
2563 4249 0.987294 AGCATTGTGGTACTGAGCCT 59.013 50.000 0.00 0.00 0.00 4.58
2566 4252 1.470098 CATTGTGGTACTGAGCCTTGC 59.530 52.381 0.00 0.00 0.00 4.01
2645 4331 1.441682 GTCCGAGGTGAACGACGAC 60.442 63.158 0.00 0.00 0.00 4.34
2694 4387 2.038837 CGGGCCGTTTCCTTCCTTC 61.039 63.158 19.97 0.00 0.00 3.46
2695 4388 2.038837 GGGCCGTTTCCTTCCTTCG 61.039 63.158 0.00 0.00 0.00 3.79
2696 4389 2.038837 GGCCGTTTCCTTCCTTCGG 61.039 63.158 0.00 0.00 43.37 4.30
2763 4458 3.375642 GCTGGTTTCTGAAACTTTCTGC 58.624 45.455 26.93 21.44 41.14 4.26
2936 4642 1.077858 CCCTCTCTTTCAGGCTGCC 60.078 63.158 11.65 11.65 0.00 4.85
2987 4698 4.102838 AGCTCTAGTCCCATCTAGTCGTTA 59.897 45.833 0.00 0.00 38.66 3.18
3018 4729 2.613223 GGAGTGGTGAAGTTGCTAGTCC 60.613 54.545 0.00 0.00 0.00 3.85
3019 4730 1.348036 AGTGGTGAAGTTGCTAGTCCC 59.652 52.381 0.00 0.00 0.00 4.46
3020 4731 1.071699 GTGGTGAAGTTGCTAGTCCCA 59.928 52.381 0.00 0.00 0.00 4.37
3022 4733 2.290260 TGGTGAAGTTGCTAGTCCCATG 60.290 50.000 0.00 0.00 0.00 3.66
3024 4735 3.055385 GGTGAAGTTGCTAGTCCCATGTA 60.055 47.826 0.00 0.00 0.00 2.29
3025 4736 4.184629 GTGAAGTTGCTAGTCCCATGTAG 58.815 47.826 0.00 0.00 0.00 2.74
3026 4737 3.197766 TGAAGTTGCTAGTCCCATGTAGG 59.802 47.826 0.00 0.00 37.03 3.18
3054 4767 4.363990 CTGTGCTCGGACCGCTGT 62.364 66.667 9.66 0.00 0.00 4.40
3055 4768 4.357947 TGTGCTCGGACCGCTGTC 62.358 66.667 9.66 0.00 40.98 3.51
3056 4769 4.057428 GTGCTCGGACCGCTGTCT 62.057 66.667 9.66 0.00 41.47 3.41
3082 4800 4.502282 TGTTGCTTCGTTTTTAGCATGTTG 59.498 37.500 0.00 0.00 45.92 3.33
3210 4945 2.679450 TGCATGCTTGTTTCTGAATGC 58.321 42.857 20.33 0.00 40.57 3.56
3246 4981 1.552337 ACTCTGTCGCTGGAATGATGT 59.448 47.619 0.00 0.00 0.00 3.06
3259 4994 4.756642 TGGAATGATGTTCTGTCTTGTGAC 59.243 41.667 0.00 0.00 43.20 3.67
3292 5055 1.331214 ATGTTTGTTGTGGAGCCCTG 58.669 50.000 0.00 0.00 0.00 4.45
3293 5056 0.754957 TGTTTGTTGTGGAGCCCTGG 60.755 55.000 0.00 0.00 0.00 4.45
3301 5064 1.152030 TGGAGCCCTGGAGTCTTGT 60.152 57.895 0.00 0.00 0.00 3.16
3302 5065 1.194781 TGGAGCCCTGGAGTCTTGTC 61.195 60.000 0.00 0.00 0.00 3.18
3312 5162 4.023707 CCTGGAGTCTTGTCATGTTTTGTC 60.024 45.833 0.00 0.00 0.00 3.18
3331 5181 3.452264 TGTCGAAATCTGAGTGATCCCAT 59.548 43.478 0.00 0.00 33.57 4.00
3332 5182 3.806521 GTCGAAATCTGAGTGATCCCATG 59.193 47.826 0.00 0.00 33.57 3.66
3333 5183 3.136763 CGAAATCTGAGTGATCCCATGG 58.863 50.000 4.14 4.14 33.57 3.66
3334 5184 2.653234 AATCTGAGTGATCCCATGGC 57.347 50.000 6.09 0.00 33.57 4.40
3335 5185 1.817087 ATCTGAGTGATCCCATGGCT 58.183 50.000 6.09 0.00 0.00 4.75
3336 5186 1.588239 TCTGAGTGATCCCATGGCTT 58.412 50.000 6.09 0.00 0.00 4.35
3337 5187 1.487976 TCTGAGTGATCCCATGGCTTC 59.512 52.381 6.09 5.69 0.00 3.86
3338 5188 1.489649 CTGAGTGATCCCATGGCTTCT 59.510 52.381 6.09 0.00 0.00 2.85
3339 5189 2.702478 CTGAGTGATCCCATGGCTTCTA 59.298 50.000 6.09 0.00 0.00 2.10
3340 5190 2.702478 TGAGTGATCCCATGGCTTCTAG 59.298 50.000 6.09 0.00 0.00 2.43
3341 5191 2.703007 GAGTGATCCCATGGCTTCTAGT 59.297 50.000 6.09 0.00 0.00 2.57
3342 5192 3.898123 GAGTGATCCCATGGCTTCTAGTA 59.102 47.826 6.09 0.00 0.00 1.82
3343 5193 4.497516 AGTGATCCCATGGCTTCTAGTAT 58.502 43.478 6.09 0.00 0.00 2.12
3344 5194 4.910304 AGTGATCCCATGGCTTCTAGTATT 59.090 41.667 6.09 0.00 0.00 1.89
3345 5195 5.370880 AGTGATCCCATGGCTTCTAGTATTT 59.629 40.000 6.09 0.00 0.00 1.40
3346 5196 5.471456 GTGATCCCATGGCTTCTAGTATTTG 59.529 44.000 6.09 0.00 0.00 2.32
3347 5197 3.820557 TCCCATGGCTTCTAGTATTTGC 58.179 45.455 6.09 0.00 0.00 3.68
3348 5198 2.887152 CCCATGGCTTCTAGTATTTGCC 59.113 50.000 6.09 0.00 43.49 4.52
3349 5199 3.435601 CCCATGGCTTCTAGTATTTGCCT 60.436 47.826 6.09 0.00 43.57 4.75
3350 5200 4.202461 CCCATGGCTTCTAGTATTTGCCTA 60.202 45.833 6.09 0.00 43.57 3.93
3351 5201 5.515534 CCCATGGCTTCTAGTATTTGCCTAT 60.516 44.000 6.09 0.00 43.57 2.57
3352 5202 6.006449 CCATGGCTTCTAGTATTTGCCTATT 58.994 40.000 0.00 0.00 43.57 1.73
3353 5203 6.491403 CCATGGCTTCTAGTATTTGCCTATTT 59.509 38.462 0.00 0.00 43.57 1.40
3354 5204 7.014615 CCATGGCTTCTAGTATTTGCCTATTTT 59.985 37.037 0.00 0.00 43.57 1.82
3355 5205 7.568199 TGGCTTCTAGTATTTGCCTATTTTC 57.432 36.000 0.00 0.00 43.57 2.29
3356 5206 7.346471 TGGCTTCTAGTATTTGCCTATTTTCT 58.654 34.615 0.00 0.00 43.57 2.52
3357 5207 7.283127 TGGCTTCTAGTATTTGCCTATTTTCTG 59.717 37.037 0.00 0.00 43.57 3.02
3358 5208 7.499232 GGCTTCTAGTATTTGCCTATTTTCTGA 59.501 37.037 0.00 0.00 40.36 3.27
3359 5209 8.893727 GCTTCTAGTATTTGCCTATTTTCTGAA 58.106 33.333 0.00 0.00 0.00 3.02
3403 5255 8.539544 TGGATAAGATTACAGTCTTGATTGTGA 58.460 33.333 8.68 1.77 38.79 3.58
3408 5260 7.619050 AGATTACAGTCTTGATTGTGATCTGT 58.381 34.615 22.74 10.91 44.22 3.41
3409 5261 7.548427 AGATTACAGTCTTGATTGTGATCTGTG 59.452 37.037 22.74 0.00 44.22 3.66
3410 5262 4.321718 ACAGTCTTGATTGTGATCTGTGG 58.678 43.478 0.00 0.00 34.18 4.17
3411 5263 3.688185 CAGTCTTGATTGTGATCTGTGGG 59.312 47.826 0.00 0.00 33.28 4.61
3412 5264 2.421424 GTCTTGATTGTGATCTGTGGGC 59.579 50.000 0.00 0.00 33.28 5.36
3413 5265 2.306805 TCTTGATTGTGATCTGTGGGCT 59.693 45.455 0.00 0.00 33.28 5.19
3414 5266 2.885135 TGATTGTGATCTGTGGGCTT 57.115 45.000 0.00 0.00 33.28 4.35
3415 5267 3.159213 TGATTGTGATCTGTGGGCTTT 57.841 42.857 0.00 0.00 33.28 3.51
3416 5268 3.499338 TGATTGTGATCTGTGGGCTTTT 58.501 40.909 0.00 0.00 33.28 2.27
3417 5269 3.256383 TGATTGTGATCTGTGGGCTTTTG 59.744 43.478 0.00 0.00 33.28 2.44
3428 5280 1.480137 TGGGCTTTTGTTTGACCACTG 59.520 47.619 0.00 0.00 0.00 3.66
3429 5281 1.480545 GGGCTTTTGTTTGACCACTGT 59.519 47.619 0.00 0.00 0.00 3.55
3430 5282 2.691011 GGGCTTTTGTTTGACCACTGTA 59.309 45.455 0.00 0.00 0.00 2.74
3431 5283 3.243401 GGGCTTTTGTTTGACCACTGTAG 60.243 47.826 0.00 0.00 0.00 2.74
3442 5294 3.005205 CACTGTAGTGTGGCAGCAA 57.995 52.632 3.88 0.00 40.96 3.91
3443 5295 1.308047 CACTGTAGTGTGGCAGCAAA 58.692 50.000 3.88 0.00 40.96 3.68
3459 5311 1.823828 CAAATGCTTCATCTGCGAGC 58.176 50.000 0.00 0.00 36.95 5.03
3469 5321 1.003759 CATCTGCGAGCAAGATTCAGC 60.004 52.381 0.00 0.00 0.00 4.26
3482 5336 2.570752 AGATTCAGCACTGGTCATCTGT 59.429 45.455 0.00 0.00 0.00 3.41
3494 5348 1.198637 GTCATCTGTTTGGCAGCAGAC 59.801 52.381 20.73 9.82 43.45 3.51
3496 5350 1.580845 ATCTGTTTGGCAGCAGACGC 61.581 55.000 20.73 0.00 43.45 5.19
3510 5390 2.415512 GCAGACGCTTACTTTTGTAGGG 59.584 50.000 0.00 0.00 36.14 3.53
3511 5391 3.660865 CAGACGCTTACTTTTGTAGGGT 58.339 45.455 0.00 0.00 36.14 4.34
3515 5395 5.008316 AGACGCTTACTTTTGTAGGGTTTTG 59.992 40.000 0.00 0.00 36.14 2.44
3522 5402 4.643334 ACTTTTGTAGGGTTTTGTCTGTCC 59.357 41.667 0.00 0.00 0.00 4.02
3538 5418 3.330701 TCTGTCCCTTTTGGTTCTGCTAT 59.669 43.478 0.00 0.00 38.10 2.97
3539 5419 4.534500 TCTGTCCCTTTTGGTTCTGCTATA 59.466 41.667 0.00 0.00 38.10 1.31
3544 5424 6.882678 GTCCCTTTTGGTTCTGCTATAAACTA 59.117 38.462 0.00 0.00 38.10 2.24
3545 5425 6.882678 TCCCTTTTGGTTCTGCTATAAACTAC 59.117 38.462 0.00 0.00 38.10 2.73
3546 5426 6.884836 CCCTTTTGGTTCTGCTATAAACTACT 59.115 38.462 0.00 0.00 38.10 2.57
3548 5428 7.824779 CCTTTTGGTTCTGCTATAAACTACTCT 59.175 37.037 0.00 0.00 34.07 3.24
3549 5429 8.547967 TTTTGGTTCTGCTATAAACTACTCTG 57.452 34.615 0.00 0.00 0.00 3.35
3550 5430 6.222038 TGGTTCTGCTATAAACTACTCTGG 57.778 41.667 0.00 0.00 0.00 3.86
3551 5431 5.128827 TGGTTCTGCTATAAACTACTCTGGG 59.871 44.000 0.00 0.00 0.00 4.45
3552 5432 5.363005 GGTTCTGCTATAAACTACTCTGGGA 59.637 44.000 0.00 0.00 0.00 4.37
3554 5434 6.902771 TCTGCTATAAACTACTCTGGGATC 57.097 41.667 0.00 0.00 0.00 3.36
3556 5436 7.069986 TCTGCTATAAACTACTCTGGGATCTT 58.930 38.462 0.00 0.00 0.00 2.40
3557 5437 7.231722 TCTGCTATAAACTACTCTGGGATCTTC 59.768 40.741 0.00 0.00 0.00 2.87
3558 5438 6.267928 TGCTATAAACTACTCTGGGATCTTCC 59.732 42.308 0.00 0.00 35.23 3.46
3559 5439 6.267928 GCTATAAACTACTCTGGGATCTTCCA 59.732 42.308 0.00 0.00 38.64 3.53
3560 5440 7.202011 GCTATAAACTACTCTGGGATCTTCCAA 60.202 40.741 0.00 0.00 38.64 3.53
3561 5441 7.698163 ATAAACTACTCTGGGATCTTCCAAT 57.302 36.000 0.00 0.00 38.64 3.16
3564 5444 6.394345 ACTACTCTGGGATCTTCCAATTTT 57.606 37.500 0.00 0.00 38.64 1.82
3566 5446 5.003096 ACTCTGGGATCTTCCAATTTTGT 57.997 39.130 0.00 0.00 38.64 2.83
3568 5448 5.478332 ACTCTGGGATCTTCCAATTTTGTTC 59.522 40.000 0.00 0.00 38.64 3.18
3571 5469 4.527816 TGGGATCTTCCAATTTTGTTCAGG 59.472 41.667 0.00 0.00 38.64 3.86
3576 5474 6.331369 TCTTCCAATTTTGTTCAGGATCAC 57.669 37.500 0.00 0.00 0.00 3.06
3582 5480 5.649782 ATTTTGTTCAGGATCACCATCAC 57.350 39.130 0.00 0.00 38.94 3.06
3583 5481 2.787473 TGTTCAGGATCACCATCACC 57.213 50.000 0.00 0.00 38.94 4.02
3587 5485 0.812811 CAGGATCACCATCACCGCTG 60.813 60.000 0.00 0.00 38.94 5.18
3595 5493 1.341531 ACCATCACCGCTGTATCTAGC 59.658 52.381 0.00 0.00 40.29 3.42
3613 5535 0.452784 GCGACATGACGTTTTCTGCC 60.453 55.000 18.25 0.00 35.59 4.85
3644 5566 1.067295 TGTCACCTGCCTCCAATTCT 58.933 50.000 0.00 0.00 0.00 2.40
3645 5567 1.271543 TGTCACCTGCCTCCAATTCTG 60.272 52.381 0.00 0.00 0.00 3.02
3646 5568 1.003580 GTCACCTGCCTCCAATTCTGA 59.996 52.381 0.00 0.00 0.00 3.27
3647 5569 1.704628 TCACCTGCCTCCAATTCTGAA 59.295 47.619 0.00 0.00 0.00 3.02
3648 5570 2.089980 CACCTGCCTCCAATTCTGAAG 58.910 52.381 0.00 0.00 0.00 3.02
3649 5571 1.101331 CCTGCCTCCAATTCTGAAGC 58.899 55.000 0.00 0.00 0.00 3.86
3650 5572 1.101331 CTGCCTCCAATTCTGAAGCC 58.899 55.000 0.00 0.00 0.00 4.35
3651 5573 0.700564 TGCCTCCAATTCTGAAGCCT 59.299 50.000 0.00 0.00 0.00 4.58
3652 5574 1.101331 GCCTCCAATTCTGAAGCCTG 58.899 55.000 0.00 0.00 0.00 4.85
3653 5575 1.101331 CCTCCAATTCTGAAGCCTGC 58.899 55.000 0.00 0.00 0.00 4.85
3654 5576 1.101331 CTCCAATTCTGAAGCCTGCC 58.899 55.000 0.00 0.00 0.00 4.85
3655 5577 0.700564 TCCAATTCTGAAGCCTGCCT 59.299 50.000 0.00 0.00 0.00 4.75
3656 5578 0.815734 CCAATTCTGAAGCCTGCCTG 59.184 55.000 0.00 0.00 0.00 4.85
3657 5579 1.542492 CAATTCTGAAGCCTGCCTGT 58.458 50.000 0.00 0.00 0.00 4.00
3658 5580 2.618816 CCAATTCTGAAGCCTGCCTGTA 60.619 50.000 0.00 0.00 0.00 2.74
3662 5584 1.002430 TCTGAAGCCTGCCTGTAGTTG 59.998 52.381 0.00 0.00 0.00 3.16
3664 5586 0.324943 GAAGCCTGCCTGTAGTTGGA 59.675 55.000 0.00 0.00 0.00 3.53
3666 5588 0.543749 AGCCTGCCTGTAGTTGGATC 59.456 55.000 0.00 0.00 0.00 3.36
3671 5593 2.437281 CTGCCTGTAGTTGGATCCATCT 59.563 50.000 25.10 25.10 0.00 2.90
3702 5624 2.030717 GTCGAGTGTGACATGAGTCTGT 60.031 50.000 0.00 0.00 45.20 3.41
3705 5627 3.669290 CGAGTGTGACATGAGTCTGTCTC 60.669 52.174 17.81 15.53 44.73 3.36
3716 5638 3.070748 GAGTCTGTCTCCTCTTTTTGGC 58.929 50.000 0.00 0.00 37.22 4.52
3718 5640 2.810852 GTCTGTCTCCTCTTTTTGGCAG 59.189 50.000 0.00 0.00 0.00 4.85
3720 5642 1.133823 TGTCTCCTCTTTTTGGCAGCA 60.134 47.619 0.00 0.00 0.00 4.41
3722 5644 2.560105 GTCTCCTCTTTTTGGCAGCAAT 59.440 45.455 0.00 0.00 0.00 3.56
3723 5645 3.758554 GTCTCCTCTTTTTGGCAGCAATA 59.241 43.478 0.00 0.00 0.00 1.90
3724 5646 4.012374 TCTCCTCTTTTTGGCAGCAATAG 58.988 43.478 0.00 0.00 0.00 1.73
3763 5694 1.347378 TGTGAAGATGCAGCACTACCA 59.653 47.619 4.07 0.00 33.83 3.25
3766 5697 2.224499 TGAAGATGCAGCACTACCAACA 60.224 45.455 4.07 0.00 0.00 3.33
3767 5698 2.566833 AGATGCAGCACTACCAACAA 57.433 45.000 4.07 0.00 0.00 2.83
3768 5699 2.430465 AGATGCAGCACTACCAACAAG 58.570 47.619 4.07 0.00 0.00 3.16
3769 5700 2.038952 AGATGCAGCACTACCAACAAGA 59.961 45.455 4.07 0.00 0.00 3.02
3770 5701 2.566833 TGCAGCACTACCAACAAGAT 57.433 45.000 0.00 0.00 0.00 2.40
3773 5710 2.813754 GCAGCACTACCAACAAGATTGA 59.186 45.455 0.00 0.00 0.00 2.57
3774 5711 3.365364 GCAGCACTACCAACAAGATTGAC 60.365 47.826 0.00 0.00 0.00 3.18
3779 5716 5.300752 CACTACCAACAAGATTGACTGACT 58.699 41.667 0.00 0.00 0.00 3.41
3783 5720 4.576463 ACCAACAAGATTGACTGACTGTTC 59.424 41.667 0.00 0.00 28.41 3.18
3791 5728 4.801330 TTGACTGACTGTTCACGGATAT 57.199 40.909 0.00 0.00 0.00 1.63
3796 5733 5.111989 ACTGACTGTTCACGGATATGATTG 58.888 41.667 0.00 0.00 0.00 2.67
3798 5735 6.127451 ACTGACTGTTCACGGATATGATTGTA 60.127 38.462 0.00 0.00 0.00 2.41
3810 5747 6.516693 CGGATATGATTGTACTACTGCTGGAA 60.517 42.308 0.00 0.00 0.00 3.53
3812 5749 7.715249 GGATATGATTGTACTACTGCTGGAAAA 59.285 37.037 0.00 0.00 0.00 2.29
3819 5756 5.700832 TGTACTACTGCTGGAAAACATTCTG 59.299 40.000 0.00 0.00 0.00 3.02
3828 5765 3.132646 TGGAAAACATTCTGTTGCTGCTT 59.867 39.130 0.00 0.00 40.14 3.91
3831 5768 5.277011 GGAAAACATTCTGTTGCTGCTTTTC 60.277 40.000 0.00 5.44 40.14 2.29
3842 5780 2.747446 TGCTGCTTTTCGGTTATCCTTC 59.253 45.455 0.00 0.00 0.00 3.46
3895 5838 1.921887 CAGTTTGTGTGTTTGCTGCAG 59.078 47.619 10.11 10.11 0.00 4.41
3908 5851 0.029300 GCTGCAGTTCGTTCTTGCAA 59.971 50.000 16.64 0.00 34.96 4.08
3916 5859 5.510671 CAGTTCGTTCTTGCAACTGTTTAT 58.489 37.500 0.00 0.00 41.38 1.40
3917 5860 5.971202 CAGTTCGTTCTTGCAACTGTTTATT 59.029 36.000 0.00 0.00 41.38 1.40
3918 5861 6.140737 CAGTTCGTTCTTGCAACTGTTTATTC 59.859 38.462 0.00 0.00 41.38 1.75
3920 5863 4.023536 TCGTTCTTGCAACTGTTTATTCCC 60.024 41.667 0.00 0.00 0.00 3.97
3921 5864 4.556233 GTTCTTGCAACTGTTTATTCCCC 58.444 43.478 0.00 0.00 0.00 4.81
3922 5865 3.838565 TCTTGCAACTGTTTATTCCCCA 58.161 40.909 0.00 0.00 0.00 4.96
3924 5867 4.220382 TCTTGCAACTGTTTATTCCCCATG 59.780 41.667 0.00 0.00 0.00 3.66
3950 5915 2.167487 GCCTGTGTTTTGGTTTTGGAGA 59.833 45.455 0.00 0.00 0.00 3.71
3953 5918 5.241662 CCTGTGTTTTGGTTTTGGAGAAAA 58.758 37.500 0.00 0.00 0.00 2.29
3993 5958 2.290847 TGGGGACAGCAGTCTGATC 58.709 57.895 9.29 0.00 44.36 2.92
4001 5966 1.483827 CAGCAGTCTGATCCCTTGCTA 59.516 52.381 3.32 0.00 42.75 3.49
4023 5988 1.068055 GGCAGCAACAGTTGGAGATTG 60.068 52.381 15.28 0.00 0.00 2.67
4045 6010 2.028839 TGATGCTGGGAAAATGCACAAG 60.029 45.455 0.00 0.00 39.63 3.16
4048 6016 3.164268 TGCTGGGAAAATGCACAAGTAT 58.836 40.909 0.00 0.00 0.00 2.12
4061 6029 5.804639 TGCACAAGTATATTGGTTCTCTGT 58.195 37.500 0.00 0.00 0.00 3.41
4065 6033 7.010552 GCACAAGTATATTGGTTCTCTGTACAG 59.989 40.741 17.17 17.17 0.00 2.74
4071 6039 7.914427 ATATTGGTTCTCTGTACAGTATCCA 57.086 36.000 21.99 19.96 0.00 3.41
4072 6040 5.401531 TTGGTTCTCTGTACAGTATCCAC 57.598 43.478 21.99 12.32 0.00 4.02
4074 6042 5.823312 TGGTTCTCTGTACAGTATCCACTA 58.177 41.667 21.99 8.61 32.21 2.74
4075 6043 5.651139 TGGTTCTCTGTACAGTATCCACTAC 59.349 44.000 21.99 9.89 32.21 2.73
4078 6046 6.063496 TCTCTGTACAGTATCCACTACACT 57.937 41.667 21.99 0.00 32.21 3.55
4082 6050 7.400439 TCTGTACAGTATCCACTACACTACTT 58.600 38.462 21.99 0.00 32.21 2.24
4100 6180 0.960364 TTCCCAGCAGCAATTCGGAC 60.960 55.000 0.00 0.00 0.00 4.79
4101 6181 1.675310 CCCAGCAGCAATTCGGACA 60.675 57.895 0.00 0.00 0.00 4.02
4102 6182 1.651240 CCCAGCAGCAATTCGGACAG 61.651 60.000 0.00 0.00 0.00 3.51
4103 6183 0.957395 CCAGCAGCAATTCGGACAGT 60.957 55.000 0.00 0.00 0.00 3.55
4106 6186 0.445436 GCAGCAATTCGGACAGTGAG 59.555 55.000 0.00 0.00 0.00 3.51
4108 6188 1.016130 AGCAATTCGGACAGTGAGCG 61.016 55.000 0.00 0.00 0.00 5.03
4109 6189 1.014044 GCAATTCGGACAGTGAGCGA 61.014 55.000 0.00 0.00 0.00 4.93
4110 6190 1.428448 CAATTCGGACAGTGAGCGAA 58.572 50.000 0.00 0.00 0.00 4.70
4112 6192 0.603569 ATTCGGACAGTGAGCGAACT 59.396 50.000 0.00 0.00 0.00 3.01
4113 6193 0.039437 TTCGGACAGTGAGCGAACTC 60.039 55.000 0.00 0.00 43.76 3.01
4114 6194 0.889638 TCGGACAGTGAGCGAACTCT 60.890 55.000 0.00 0.00 43.85 3.24
4115 6195 0.039074 CGGACAGTGAGCGAACTCTT 60.039 55.000 0.00 0.00 43.85 2.85
4116 6196 1.603172 CGGACAGTGAGCGAACTCTTT 60.603 52.381 0.00 0.00 43.85 2.52
4117 6197 2.484889 GGACAGTGAGCGAACTCTTTT 58.515 47.619 0.00 0.00 43.85 2.27
4118 6198 2.221981 GGACAGTGAGCGAACTCTTTTG 59.778 50.000 0.00 0.00 43.85 2.44
4119 6199 2.213499 ACAGTGAGCGAACTCTTTTGG 58.787 47.619 0.00 0.00 43.85 3.28
4122 6202 2.158957 AGTGAGCGAACTCTTTTGGTGA 60.159 45.455 0.00 0.00 43.85 4.02
4124 6204 2.807967 TGAGCGAACTCTTTTGGTGATG 59.192 45.455 0.00 0.00 43.85 3.07
4126 6206 3.994392 GAGCGAACTCTTTTGGTGATGTA 59.006 43.478 0.00 0.00 40.03 2.29
4127 6207 3.746492 AGCGAACTCTTTTGGTGATGTAC 59.254 43.478 0.00 0.00 0.00 2.90
4128 6208 3.746492 GCGAACTCTTTTGGTGATGTACT 59.254 43.478 0.00 0.00 0.00 2.73
4146 6290 2.180131 CTGTGCCGTGCTTGCTCTTC 62.180 60.000 0.00 0.00 0.00 2.87
4147 6291 2.110835 TGCCGTGCTTGCTCTTCA 59.889 55.556 0.00 0.00 0.00 3.02
4149 6293 1.963338 GCCGTGCTTGCTCTTCAGT 60.963 57.895 0.00 0.00 0.00 3.41
4150 6294 1.905922 GCCGTGCTTGCTCTTCAGTC 61.906 60.000 0.00 0.00 0.00 3.51
4151 6295 0.601046 CCGTGCTTGCTCTTCAGTCA 60.601 55.000 0.00 0.00 0.00 3.41
4152 6296 0.510359 CGTGCTTGCTCTTCAGTCAC 59.490 55.000 0.00 0.00 0.00 3.67
4153 6297 1.586422 GTGCTTGCTCTTCAGTCACA 58.414 50.000 0.00 0.00 32.57 3.58
4154 6298 1.530293 GTGCTTGCTCTTCAGTCACAG 59.470 52.381 0.00 0.00 32.57 3.66
4155 6299 1.139654 TGCTTGCTCTTCAGTCACAGT 59.860 47.619 0.00 0.00 0.00 3.55
4160 6304 1.695813 CTCTTCAGTCACAGTGAGCG 58.304 55.000 2.53 0.00 0.00 5.03
4176 6320 2.287915 TGAGCGAACTCTTTGTTTCAGC 59.712 45.455 0.00 0.00 43.85 4.26
4180 6324 7.258454 GAGCGAACTCTTTGTTTCAGCATGA 62.258 44.000 0.00 0.00 41.29 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.176619 TCTTCGACTTCTGGCACGGA 61.177 55.000 0.00 0.00 45.11 4.69
6 7 0.319555 TTCTTCGACTTCTGGCACGG 60.320 55.000 0.00 0.00 0.00 4.94
7 8 1.063806 CTTCTTCGACTTCTGGCACG 58.936 55.000 0.00 0.00 0.00 5.34
10 11 1.068472 TCGTCTTCTTCGACTTCTGGC 60.068 52.381 0.00 0.00 32.30 4.85
11 12 2.991434 TCGTCTTCTTCGACTTCTGG 57.009 50.000 0.00 0.00 32.30 3.86
15 16 4.809426 ACACATTTTCGTCTTCTTCGACTT 59.191 37.500 0.00 0.00 37.05 3.01
16 17 4.369182 ACACATTTTCGTCTTCTTCGACT 58.631 39.130 0.00 0.00 37.05 4.18
18 19 5.526115 ACTACACATTTTCGTCTTCTTCGA 58.474 37.500 0.00 0.00 35.50 3.71
19 20 5.164080 GGACTACACATTTTCGTCTTCTTCG 60.164 44.000 0.00 0.00 0.00 3.79
22 23 4.039973 TGGGACTACACATTTTCGTCTTCT 59.960 41.667 0.00 0.00 0.00 2.85
23 24 4.312443 TGGGACTACACATTTTCGTCTTC 58.688 43.478 0.00 0.00 0.00 2.87
25 26 4.345859 TTGGGACTACACATTTTCGTCT 57.654 40.909 0.00 0.00 0.00 4.18
27 28 4.274950 CACTTTGGGACTACACATTTTCGT 59.725 41.667 0.00 0.00 0.00 3.85
29 30 5.121221 CCACTTTGGGACTACACATTTTC 57.879 43.478 0.00 0.00 32.67 2.29
86 968 1.790818 CTACTTCCCTACCCCTCACC 58.209 60.000 0.00 0.00 0.00 4.02
124 1007 6.975197 CACACACACTATAACCTGACATCTAG 59.025 42.308 0.00 0.00 0.00 2.43
125 1008 6.661805 TCACACACACTATAACCTGACATCTA 59.338 38.462 0.00 0.00 0.00 1.98
126 1009 5.480422 TCACACACACTATAACCTGACATCT 59.520 40.000 0.00 0.00 0.00 2.90
139 1114 3.637911 AACAAGGGTTCACACACACTA 57.362 42.857 0.00 0.00 29.00 2.74
192 1167 1.878102 GCGTAGAATATGGGGTGCTGG 60.878 57.143 0.00 0.00 0.00 4.85
194 1169 0.396811 GGCGTAGAATATGGGGTGCT 59.603 55.000 0.00 0.00 0.00 4.40
205 1180 2.260434 GTCTGGCGTGGCGTAGAA 59.740 61.111 0.00 0.00 0.00 2.10
208 1183 4.367023 GGTGTCTGGCGTGGCGTA 62.367 66.667 0.00 0.00 0.00 4.42
216 1191 4.923871 CGTCATATAGTTATGGTGTCTGGC 59.076 45.833 0.00 0.00 36.61 4.85
217 1192 5.920840 CACGTCATATAGTTATGGTGTCTGG 59.079 44.000 0.00 0.00 36.61 3.86
220 1195 5.175126 GCACACGTCATATAGTTATGGTGTC 59.825 44.000 0.00 0.00 38.27 3.67
226 1201 5.163343 ACCTTGGCACACGTCATATAGTTAT 60.163 40.000 0.00 0.00 39.29 1.89
266 1241 0.389426 GGAAGCAGTAACCGAAGCGA 60.389 55.000 0.00 0.00 0.00 4.93
274 1249 2.067013 GGAACAGACGGAAGCAGTAAC 58.933 52.381 0.00 0.00 0.00 2.50
299 1274 5.355910 GGGTTGCCTATTCGAGTGATAAAAA 59.644 40.000 0.00 0.00 0.00 1.94
300 1275 4.879545 GGGTTGCCTATTCGAGTGATAAAA 59.120 41.667 0.00 0.00 0.00 1.52
309 1284 1.518774 GACGGGGTTGCCTATTCGA 59.481 57.895 0.00 0.00 0.00 3.71
318 1293 1.666872 GAGGTCAACGACGGGGTTG 60.667 63.158 12.90 12.90 46.70 3.77
328 1303 3.499737 CATGCGGGCGAGGTCAAC 61.500 66.667 0.00 0.00 0.00 3.18
348 1323 3.756727 GCTGCTGGGAAGCAAGCC 61.757 66.667 1.61 0.00 44.88 4.35
349 1324 3.756727 GGCTGCTGGGAAGCAAGC 61.757 66.667 0.00 7.53 44.88 4.01
363 1338 4.643387 GGACACCACCAAGCGGCT 62.643 66.667 0.00 0.00 34.57 5.52
390 1365 6.531503 TGTCCAGAAACACAACCATAAAAA 57.468 33.333 0.00 0.00 0.00 1.94
420 1395 6.531503 TGTCCAGAAACACAACCATAAAAA 57.468 33.333 0.00 0.00 0.00 1.94
421 1396 6.097554 ACATGTCCAGAAACACAACCATAAAA 59.902 34.615 0.00 0.00 30.55 1.52
422 1397 5.596361 ACATGTCCAGAAACACAACCATAAA 59.404 36.000 0.00 0.00 30.55 1.40
423 1398 5.136828 ACATGTCCAGAAACACAACCATAA 58.863 37.500 0.00 0.00 30.55 1.90
424 1399 4.724399 ACATGTCCAGAAACACAACCATA 58.276 39.130 0.00 0.00 30.55 2.74
425 1400 3.565307 ACATGTCCAGAAACACAACCAT 58.435 40.909 0.00 0.00 30.55 3.55
426 1401 3.011566 ACATGTCCAGAAACACAACCA 57.988 42.857 0.00 0.00 30.55 3.67
427 1402 4.111916 CAAACATGTCCAGAAACACAACC 58.888 43.478 0.00 0.00 30.55 3.77
428 1403 3.551485 GCAAACATGTCCAGAAACACAAC 59.449 43.478 0.00 0.00 30.55 3.32
429 1404 3.733380 CGCAAACATGTCCAGAAACACAA 60.733 43.478 0.00 0.00 30.55 3.33
430 1405 2.223456 CGCAAACATGTCCAGAAACACA 60.223 45.455 0.00 0.00 30.55 3.72
431 1406 2.384382 CGCAAACATGTCCAGAAACAC 58.616 47.619 0.00 0.00 30.55 3.32
432 1407 1.268999 GCGCAAACATGTCCAGAAACA 60.269 47.619 0.30 0.00 0.00 2.83
433 1408 1.408422 GCGCAAACATGTCCAGAAAC 58.592 50.000 0.30 0.00 0.00 2.78
437 1412 2.176546 CGGCGCAAACATGTCCAG 59.823 61.111 10.83 0.00 0.00 3.86
459 1434 5.449451 CGGAAATAAAATAAGTCGGTTGGGG 60.449 44.000 0.00 0.00 0.00 4.96
466 1441 5.446899 GTCGCAACGGAAATAAAATAAGTCG 59.553 40.000 0.00 0.00 0.00 4.18
501 1477 0.810031 AATCGTCACGGCCATACAGC 60.810 55.000 2.24 0.00 0.00 4.40
516 1492 4.466828 CCGCTTTATAAATGGAGCAATCG 58.533 43.478 9.88 0.00 34.90 3.34
558 1539 1.144969 GAATGTGCTGTTTCGGTCGA 58.855 50.000 0.00 0.00 0.00 4.20
560 1541 1.197721 CAGGAATGTGCTGTTTCGGTC 59.802 52.381 0.00 0.00 30.66 4.79
568 1549 1.199327 CTTCTGTGCAGGAATGTGCTG 59.801 52.381 0.00 0.00 44.32 4.41
625 1606 1.134521 TCAGTTTTGGCAGAGACGTGT 60.135 47.619 0.00 0.00 0.00 4.49
626 1607 1.528586 CTCAGTTTTGGCAGAGACGTG 59.471 52.381 0.00 0.00 0.00 4.49
635 1616 1.204312 GACGCGTCTCAGTTTTGGC 59.796 57.895 31.12 0.67 0.00 4.52
638 1619 0.038526 ATCGGACGCGTCTCAGTTTT 60.039 50.000 35.50 13.18 0.00 2.43
642 1623 1.583967 GTCATCGGACGCGTCTCAG 60.584 63.158 35.50 26.13 33.68 3.35
643 1624 2.483745 GTCATCGGACGCGTCTCA 59.516 61.111 35.50 23.50 33.68 3.27
655 1636 0.615331 TCTTCTGCCCACCTGTCATC 59.385 55.000 0.00 0.00 0.00 2.92
657 1638 0.397941 CTTCTTCTGCCCACCTGTCA 59.602 55.000 0.00 0.00 0.00 3.58
662 1643 0.037447 AGAAGCTTCTTCTGCCCACC 59.963 55.000 23.49 0.00 32.55 4.61
664 1645 1.066858 CGTAGAAGCTTCTTCTGCCCA 60.067 52.381 32.70 11.45 38.70 5.36
665 1646 1.646189 CGTAGAAGCTTCTTCTGCCC 58.354 55.000 32.70 13.35 38.70 5.36
670 1651 0.537653 AGGGGCGTAGAAGCTTCTTC 59.462 55.000 32.70 25.87 38.70 2.87
690 1671 2.978156 TGGGCATTTCTGGAAAGTCT 57.022 45.000 2.29 0.00 33.32 3.24
692 1673 2.368548 GGTTTGGGCATTTCTGGAAAGT 59.631 45.455 2.29 0.00 33.32 2.66
699 1680 2.282783 GGGCGGTTTGGGCATTTCT 61.283 57.895 0.00 0.00 0.00 2.52
720 1701 1.002624 TGCTTTCCGATGGGTGGAC 60.003 57.895 0.00 0.00 34.56 4.02
724 1705 1.002134 CCTGTGCTTTCCGATGGGT 60.002 57.895 0.00 0.00 33.83 4.51
731 1712 0.250467 TCTCTGTGCCTGTGCTTTCC 60.250 55.000 0.00 0.00 38.71 3.13
745 1726 3.777925 CGGCGCGTTTGGTCTCTG 61.778 66.667 8.43 0.00 0.00 3.35
751 1732 4.741781 CTTCTGCGGCGCGTTTGG 62.742 66.667 28.09 14.03 0.00 3.28
790 1771 4.312231 TTGTTGCTGCGCGTGCTC 62.312 61.111 23.16 14.10 43.34 4.26
950 1945 1.955451 TTAAAGGCGGGAGGGTAGAA 58.045 50.000 0.00 0.00 0.00 2.10
951 1946 1.955451 TTTAAAGGCGGGAGGGTAGA 58.045 50.000 0.00 0.00 0.00 2.59
953 1948 1.491754 GGATTTAAAGGCGGGAGGGTA 59.508 52.381 0.00 0.00 0.00 3.69
1078 2076 2.577020 TACCTTGGGATCGGAGCGGA 62.577 60.000 0.00 0.00 0.00 5.54
1079 2077 2.131709 TACCTTGGGATCGGAGCGG 61.132 63.158 0.00 0.00 0.00 5.52
1160 2158 2.027314 CGATCAGAGCCCGCAGAG 59.973 66.667 0.00 0.00 0.00 3.35
1166 2164 1.696832 GACGCAAACGATCAGAGCCC 61.697 60.000 0.00 0.00 43.93 5.19
1328 2343 2.039405 GCAGCAGCAGGAGAACCAG 61.039 63.158 0.00 0.00 41.58 4.00
1329 2344 2.033141 GCAGCAGCAGGAGAACCA 59.967 61.111 0.00 0.00 41.58 3.67
1380 2407 1.610522 GCCACAGAAAACAGCATCAGT 59.389 47.619 0.00 0.00 0.00 3.41
1389 2416 1.278637 CGACACCGCCACAGAAAAC 59.721 57.895 0.00 0.00 0.00 2.43
1497 2537 1.945354 GCACGAATCGAGTCAGGGGA 61.945 60.000 10.55 0.00 0.00 4.81
1502 2542 3.015799 CGAAGCACGAATCGAGTCA 57.984 52.632 10.55 0.00 45.77 3.41
1525 2582 1.066002 CACACAACAGGGAAACAGCAG 59.934 52.381 0.00 0.00 0.00 4.24
1532 2589 1.821759 CACGCCACACAACAGGGAA 60.822 57.895 0.00 0.00 0.00 3.97
1533 2590 2.203139 CACGCCACACAACAGGGA 60.203 61.111 0.00 0.00 0.00 4.20
1534 2591 3.286751 CCACGCCACACAACAGGG 61.287 66.667 0.00 0.00 0.00 4.45
1535 2592 3.964875 GCCACGCCACACAACAGG 61.965 66.667 0.00 0.00 0.00 4.00
1536 2593 4.312231 CGCCACGCCACACAACAG 62.312 66.667 0.00 0.00 0.00 3.16
1538 2595 4.307908 GACGCCACGCCACACAAC 62.308 66.667 0.00 0.00 0.00 3.32
1581 2650 1.006571 TGTCCCTGCGAAGACGAAC 60.007 57.895 0.00 0.00 42.66 3.95
1728 3214 1.144708 TGCACAAGGAAACCCATCTCA 59.855 47.619 0.00 0.00 0.00 3.27
1747 3237 5.224888 CAAACCAAATCAGGACACAGAATG 58.775 41.667 0.00 0.00 46.00 2.67
1973 3473 7.962964 ATTCGAAATCTAACTGACAAACTGA 57.037 32.000 0.00 0.00 0.00 3.41
1974 3474 8.282592 TGAATTCGAAATCTAACTGACAAACTG 58.717 33.333 14.05 0.00 0.00 3.16
1975 3475 8.378172 TGAATTCGAAATCTAACTGACAAACT 57.622 30.769 14.05 0.00 0.00 2.66
1976 3476 8.283291 ACTGAATTCGAAATCTAACTGACAAAC 58.717 33.333 14.05 0.00 0.00 2.93
1977 3477 8.378172 ACTGAATTCGAAATCTAACTGACAAA 57.622 30.769 14.05 0.00 0.00 2.83
1978 3478 7.148804 CGACTGAATTCGAAATCTAACTGACAA 60.149 37.037 14.05 0.00 41.78 3.18
1979 3479 6.308041 CGACTGAATTCGAAATCTAACTGACA 59.692 38.462 14.05 0.00 41.78 3.58
1980 3480 6.687655 CGACTGAATTCGAAATCTAACTGAC 58.312 40.000 14.05 0.88 41.78 3.51
2068 3610 5.088739 GGACGTGCAATTTCTACATTTCAG 58.911 41.667 0.63 0.00 0.00 3.02
2085 3627 3.501828 TGAATTGATTGACAAGGGACGTG 59.498 43.478 0.00 0.00 45.09 4.49
2086 3628 3.750371 TGAATTGATTGACAAGGGACGT 58.250 40.909 0.00 0.00 42.02 4.34
2093 3635 4.746115 GCAGCAGTTTGAATTGATTGACAA 59.254 37.500 0.00 0.00 42.95 3.18
2136 3678 8.777413 TCAGCAATTGCATATACAGACTAAATC 58.223 33.333 30.89 0.00 45.16 2.17
2159 3701 1.339291 TGAGCATCGGCAGTAGATCAG 59.661 52.381 0.00 0.00 44.61 2.90
2245 3788 2.746277 AATTGACGAGCACGGGGC 60.746 61.111 8.74 0.00 44.46 5.80
2246 3789 0.953471 TTGAATTGACGAGCACGGGG 60.953 55.000 8.74 0.00 44.46 5.73
2270 3925 1.599518 CACTAACAGGCACGGGCAA 60.600 57.895 13.89 0.00 43.71 4.52
2281 3936 7.565323 TGCATATATGAACATTGCACTAACA 57.435 32.000 17.10 0.00 38.32 2.41
2307 3975 8.897752 AGCATAAGAGGAATAGTTGAACAAATC 58.102 33.333 0.00 0.00 0.00 2.17
2329 3997 1.922447 TCCCAGGATAACCACAAGCAT 59.078 47.619 0.00 0.00 38.94 3.79
2332 4000 1.916181 AGGTCCCAGGATAACCACAAG 59.084 52.381 8.01 0.00 38.94 3.16
2347 4032 1.797211 CGGTGCGAGGAGATAGGTCC 61.797 65.000 0.00 0.00 36.79 4.46
2356 4041 1.884075 ATGTTAGTGCGGTGCGAGGA 61.884 55.000 0.00 0.00 0.00 3.71
2360 4045 0.237235 ACAAATGTTAGTGCGGTGCG 59.763 50.000 0.00 0.00 0.00 5.34
2381 4066 2.997986 CCTGCAATTCATTCAAACAGCC 59.002 45.455 0.00 0.00 0.00 4.85
2476 4161 2.408565 GAGATGGGGATTACCTGTGGA 58.591 52.381 0.00 0.00 40.03 4.02
2512 4197 2.594303 CTGGCGGCTGTGTTTGGA 60.594 61.111 11.43 0.00 0.00 3.53
2513 4198 2.192861 TTCTGGCGGCTGTGTTTGG 61.193 57.895 11.43 0.00 0.00 3.28
2526 4211 2.224137 TGCTTGAGTGAGACAGTTCTGG 60.224 50.000 4.82 0.00 29.47 3.86
2541 4226 2.426522 GCTCAGTACCACAATGCTTGA 58.573 47.619 3.37 0.00 0.00 3.02
2544 4229 0.987294 AGGCTCAGTACCACAATGCT 59.013 50.000 0.00 0.00 0.00 3.79
2545 4231 1.470098 CAAGGCTCAGTACCACAATGC 59.530 52.381 0.00 0.00 0.00 3.56
2560 4246 1.230324 AGAAGACGAAACAGCAAGGC 58.770 50.000 0.00 0.00 0.00 4.35
2563 4249 3.131396 GGAGAAGAAGACGAAACAGCAA 58.869 45.455 0.00 0.00 0.00 3.91
2566 4252 3.014604 ACGGAGAAGAAGACGAAACAG 57.985 47.619 0.00 0.00 0.00 3.16
2645 4331 4.803426 GGCCTCACCTCGCTGTCG 62.803 72.222 0.00 0.00 34.51 4.35
2677 4369 2.038837 CGAAGGAAGGAAACGGCCC 61.039 63.158 0.00 0.00 0.00 5.80
2691 4384 1.641577 GGATCGACAAGTTCCCGAAG 58.358 55.000 0.00 0.00 35.87 3.79
2694 4387 0.389426 AACGGATCGACAAGTTCCCG 60.389 55.000 0.00 0.00 35.72 5.14
2695 4388 1.067071 AGAACGGATCGACAAGTTCCC 60.067 52.381 18.87 3.45 42.66 3.97
2696 4389 1.993370 CAGAACGGATCGACAAGTTCC 59.007 52.381 18.87 8.17 42.66 3.62
2763 4458 0.583438 CCTGCACACAAGTTCAGACG 59.417 55.000 0.00 0.00 40.82 4.18
2942 4648 3.329386 ACCATTTCTATCATCGCCATCG 58.671 45.455 0.00 0.00 0.00 3.84
2987 4698 0.032117 TCACCACTCCGATCCAGGAT 60.032 55.000 0.00 0.00 39.96 3.24
3018 4729 0.759346 GGACCCTACAGCCTACATGG 59.241 60.000 0.00 0.00 39.35 3.66
3019 4730 1.414181 CAGGACCCTACAGCCTACATG 59.586 57.143 0.00 0.00 0.00 3.21
3020 4731 1.008449 ACAGGACCCTACAGCCTACAT 59.992 52.381 0.00 0.00 0.00 2.29
3022 4733 0.824759 CACAGGACCCTACAGCCTAC 59.175 60.000 0.00 0.00 0.00 3.18
3024 4735 2.294078 GCACAGGACCCTACAGCCT 61.294 63.158 0.00 0.00 0.00 4.58
3025 4736 2.245438 GAGCACAGGACCCTACAGCC 62.245 65.000 0.00 0.00 0.00 4.85
3026 4737 1.219393 GAGCACAGGACCCTACAGC 59.781 63.158 0.00 0.00 0.00 4.40
3052 4765 4.695217 AAAAACGAAGCAACAGAAGACA 57.305 36.364 0.00 0.00 0.00 3.41
3053 4766 4.671068 GCTAAAAACGAAGCAACAGAAGAC 59.329 41.667 0.00 0.00 38.63 3.01
3054 4767 4.334203 TGCTAAAAACGAAGCAACAGAAGA 59.666 37.500 0.00 0.00 45.36 2.87
3055 4768 4.597079 TGCTAAAAACGAAGCAACAGAAG 58.403 39.130 0.00 0.00 45.36 2.85
3056 4769 4.624336 TGCTAAAAACGAAGCAACAGAA 57.376 36.364 0.00 0.00 45.36 3.02
3082 4800 6.472808 GGTACATTCGACAGAGACTGAATTAC 59.527 42.308 5.76 0.00 35.18 1.89
3161 4881 4.144297 CCATCTTCTTCCTTTCAACACCA 58.856 43.478 0.00 0.00 0.00 4.17
3210 4945 4.567971 ACAGAGTGAATGAAGCAGAGAAG 58.432 43.478 0.00 0.00 0.00 2.85
3246 4981 3.770625 TTGGCGTCACAAGACAGAA 57.229 47.368 0.00 0.00 45.23 3.02
3259 4994 3.705604 ACAAACATTCAGAAACTTGGCG 58.294 40.909 0.00 0.00 0.00 5.69
3292 5055 3.807622 TCGACAAAACATGACAAGACTCC 59.192 43.478 0.00 0.00 0.00 3.85
3293 5056 5.403897 TTCGACAAAACATGACAAGACTC 57.596 39.130 0.00 0.00 0.00 3.36
3301 5064 5.757808 TCACTCAGATTTCGACAAAACATGA 59.242 36.000 0.00 0.00 0.00 3.07
3302 5065 5.989249 TCACTCAGATTTCGACAAAACATG 58.011 37.500 0.00 0.00 0.00 3.21
3312 5162 3.136763 CCATGGGATCACTCAGATTTCG 58.863 50.000 2.85 0.00 37.00 3.46
3332 5182 7.499232 TCAGAAAATAGGCAAATACTAGAAGCC 59.501 37.037 0.00 2.14 45.54 4.35
3333 5183 8.438676 TCAGAAAATAGGCAAATACTAGAAGC 57.561 34.615 0.00 0.00 0.00 3.86
3335 5185 9.174166 GGTTCAGAAAATAGGCAAATACTAGAA 57.826 33.333 0.00 0.00 0.00 2.10
3336 5186 8.548877 AGGTTCAGAAAATAGGCAAATACTAGA 58.451 33.333 0.00 0.00 0.00 2.43
3337 5187 8.738645 AGGTTCAGAAAATAGGCAAATACTAG 57.261 34.615 0.00 0.00 0.00 2.57
3339 5189 9.700831 ATAAGGTTCAGAAAATAGGCAAATACT 57.299 29.630 0.00 0.00 0.00 2.12
3343 5193 8.455682 CGTAATAAGGTTCAGAAAATAGGCAAA 58.544 33.333 0.00 0.00 0.00 3.68
3344 5194 7.414762 GCGTAATAAGGTTCAGAAAATAGGCAA 60.415 37.037 0.00 0.00 0.00 4.52
3345 5195 6.037830 GCGTAATAAGGTTCAGAAAATAGGCA 59.962 38.462 0.00 0.00 0.00 4.75
3346 5196 6.037830 TGCGTAATAAGGTTCAGAAAATAGGC 59.962 38.462 0.00 0.00 0.00 3.93
3347 5197 7.280205 ACTGCGTAATAAGGTTCAGAAAATAGG 59.720 37.037 0.00 0.00 0.00 2.57
3348 5198 8.197988 ACTGCGTAATAAGGTTCAGAAAATAG 57.802 34.615 0.00 0.00 0.00 1.73
3349 5199 8.447833 CAACTGCGTAATAAGGTTCAGAAAATA 58.552 33.333 0.00 0.00 0.00 1.40
3350 5200 7.174253 TCAACTGCGTAATAAGGTTCAGAAAAT 59.826 33.333 0.00 0.00 0.00 1.82
3351 5201 6.483974 TCAACTGCGTAATAAGGTTCAGAAAA 59.516 34.615 0.00 0.00 0.00 2.29
3352 5202 5.992829 TCAACTGCGTAATAAGGTTCAGAAA 59.007 36.000 0.00 0.00 0.00 2.52
3353 5203 5.543714 TCAACTGCGTAATAAGGTTCAGAA 58.456 37.500 0.00 0.00 0.00 3.02
3354 5204 5.142061 TCAACTGCGTAATAAGGTTCAGA 57.858 39.130 0.00 0.00 0.00 3.27
3355 5205 5.220662 CCATCAACTGCGTAATAAGGTTCAG 60.221 44.000 0.00 0.00 0.00 3.02
3356 5206 4.634004 CCATCAACTGCGTAATAAGGTTCA 59.366 41.667 0.00 0.00 0.00 3.18
3357 5207 4.873827 TCCATCAACTGCGTAATAAGGTTC 59.126 41.667 0.00 0.00 0.00 3.62
3358 5208 4.839121 TCCATCAACTGCGTAATAAGGTT 58.161 39.130 0.00 0.00 0.00 3.50
3359 5209 4.481368 TCCATCAACTGCGTAATAAGGT 57.519 40.909 0.00 0.00 0.00 3.50
3368 5218 5.755375 ACTGTAATCTTATCCATCAACTGCG 59.245 40.000 0.00 0.00 0.00 5.18
3403 5255 2.365293 GGTCAAACAAAAGCCCACAGAT 59.635 45.455 0.00 0.00 0.00 2.90
3405 5257 1.480137 TGGTCAAACAAAAGCCCACAG 59.520 47.619 0.00 0.00 0.00 3.66
3408 5260 1.480137 CAGTGGTCAAACAAAAGCCCA 59.520 47.619 0.00 0.00 0.00 5.36
3409 5261 1.480545 ACAGTGGTCAAACAAAAGCCC 59.519 47.619 0.00 0.00 0.00 5.19
3410 5262 2.959507 ACAGTGGTCAAACAAAAGCC 57.040 45.000 0.00 0.00 0.00 4.35
3411 5263 4.351192 CACTACAGTGGTCAAACAAAAGC 58.649 43.478 1.21 0.00 42.10 3.51
3428 5280 3.406682 GCATTTGCTGCCACACTAC 57.593 52.632 0.00 0.00 45.66 2.73
3442 5294 1.400846 CTTGCTCGCAGATGAAGCATT 59.599 47.619 10.06 0.00 35.33 3.56
3443 5295 1.015109 CTTGCTCGCAGATGAAGCAT 58.985 50.000 10.06 0.00 35.33 3.79
3448 5300 2.547826 CTGAATCTTGCTCGCAGATGA 58.452 47.619 0.00 0.00 33.89 2.92
3449 5301 1.003759 GCTGAATCTTGCTCGCAGATG 60.004 52.381 0.00 0.00 33.89 2.90
3459 5311 3.374367 CAGATGACCAGTGCTGAATCTTG 59.626 47.826 0.02 0.18 0.00 3.02
3469 5321 1.608055 TGCCAAACAGATGACCAGTG 58.392 50.000 0.00 0.00 0.00 3.66
3494 5348 5.008316 AGACAAAACCCTACAAAAGTAAGCG 59.992 40.000 0.00 0.00 0.00 4.68
3496 5350 7.329588 ACAGACAAAACCCTACAAAAGTAAG 57.670 36.000 0.00 0.00 0.00 2.34
3498 5352 5.824097 GGACAGACAAAACCCTACAAAAGTA 59.176 40.000 0.00 0.00 0.00 2.24
3499 5353 4.643334 GGACAGACAAAACCCTACAAAAGT 59.357 41.667 0.00 0.00 0.00 2.66
3500 5354 4.037565 GGGACAGACAAAACCCTACAAAAG 59.962 45.833 0.00 0.00 39.28 2.27
3510 5390 4.159693 AGAACCAAAAGGGACAGACAAAAC 59.840 41.667 0.00 0.00 41.15 2.43
3511 5391 4.159506 CAGAACCAAAAGGGACAGACAAAA 59.840 41.667 0.00 0.00 41.15 2.44
3515 5395 1.609072 GCAGAACCAAAAGGGACAGAC 59.391 52.381 0.00 0.00 41.15 3.51
3522 5402 7.824779 AGAGTAGTTTATAGCAGAACCAAAAGG 59.175 37.037 0.00 0.00 0.00 3.11
3538 5418 7.510675 AATTGGAAGATCCCAGAGTAGTTTA 57.489 36.000 0.00 0.00 37.53 2.01
3539 5419 6.394345 AATTGGAAGATCCCAGAGTAGTTT 57.606 37.500 0.00 0.00 37.53 2.66
3544 5424 5.003096 ACAAAATTGGAAGATCCCAGAGT 57.997 39.130 0.00 0.00 37.53 3.24
3545 5425 5.477984 TGAACAAAATTGGAAGATCCCAGAG 59.522 40.000 0.00 0.00 37.53 3.35
3546 5426 5.392995 TGAACAAAATTGGAAGATCCCAGA 58.607 37.500 0.00 0.00 37.53 3.86
3548 5428 4.527816 CCTGAACAAAATTGGAAGATCCCA 59.472 41.667 0.00 0.00 35.03 4.37
3549 5429 4.772100 TCCTGAACAAAATTGGAAGATCCC 59.228 41.667 0.00 0.00 35.03 3.85
3550 5430 5.982890 TCCTGAACAAAATTGGAAGATCC 57.017 39.130 0.00 0.00 36.96 3.36
3551 5431 7.031975 GTGATCCTGAACAAAATTGGAAGATC 58.968 38.462 0.00 0.00 0.00 2.75
3552 5432 6.071165 GGTGATCCTGAACAAAATTGGAAGAT 60.071 38.462 0.00 0.00 0.00 2.40
3554 5434 5.010922 TGGTGATCCTGAACAAAATTGGAAG 59.989 40.000 0.00 0.00 34.23 3.46
3556 5436 4.478203 TGGTGATCCTGAACAAAATTGGA 58.522 39.130 0.00 0.00 34.23 3.53
3557 5437 4.870123 TGGTGATCCTGAACAAAATTGG 57.130 40.909 0.00 0.00 34.23 3.16
3558 5438 5.865552 GTGATGGTGATCCTGAACAAAATTG 59.134 40.000 0.00 0.00 34.23 2.32
3559 5439 5.047092 GGTGATGGTGATCCTGAACAAAATT 60.047 40.000 0.00 0.00 34.23 1.82
3560 5440 4.463891 GGTGATGGTGATCCTGAACAAAAT 59.536 41.667 0.00 0.00 34.23 1.82
3561 5441 3.826157 GGTGATGGTGATCCTGAACAAAA 59.174 43.478 0.00 0.00 34.23 2.44
3564 5444 1.066215 CGGTGATGGTGATCCTGAACA 60.066 52.381 0.00 0.00 34.23 3.18
3566 5446 0.107703 GCGGTGATGGTGATCCTGAA 60.108 55.000 0.00 0.00 34.23 3.02
3568 5448 0.812811 CAGCGGTGATGGTGATCCTG 60.813 60.000 9.50 0.00 39.68 3.86
3571 5469 2.036475 AGATACAGCGGTGATGGTGATC 59.964 50.000 23.44 12.56 39.68 2.92
3576 5474 2.071688 GCTAGATACAGCGGTGATGG 57.928 55.000 23.44 7.19 0.00 3.51
3587 5485 5.035443 AGAAAACGTCATGTCGCTAGATAC 58.965 41.667 12.29 0.00 0.00 2.24
3595 5493 0.179250 CGGCAGAAAACGTCATGTCG 60.179 55.000 10.83 10.83 34.18 4.35
3598 5496 2.032030 ACTTTCGGCAGAAAACGTCATG 60.032 45.455 13.07 2.71 44.77 3.07
3599 5497 2.218603 ACTTTCGGCAGAAAACGTCAT 58.781 42.857 13.07 0.00 44.77 3.06
3603 5501 2.468532 ACAACTTTCGGCAGAAAACG 57.531 45.000 13.07 5.40 44.77 3.60
3613 5535 2.851824 GCAGGTGACAAAACAACTTTCG 59.148 45.455 0.00 0.00 35.48 3.46
3644 5566 0.036732 CCAACTACAGGCAGGCTTCA 59.963 55.000 0.00 0.00 0.00 3.02
3645 5567 0.324943 TCCAACTACAGGCAGGCTTC 59.675 55.000 0.00 0.00 0.00 3.86
3646 5568 0.995024 ATCCAACTACAGGCAGGCTT 59.005 50.000 0.00 0.00 0.00 4.35
3647 5569 0.543749 GATCCAACTACAGGCAGGCT 59.456 55.000 0.00 0.00 0.00 4.58
3648 5570 0.464554 GGATCCAACTACAGGCAGGC 60.465 60.000 6.95 0.00 0.00 4.85
3649 5571 0.911769 TGGATCCAACTACAGGCAGG 59.088 55.000 13.46 0.00 0.00 4.85
3650 5572 2.437281 AGATGGATCCAACTACAGGCAG 59.563 50.000 22.14 0.00 0.00 4.85
3651 5573 2.481441 AGATGGATCCAACTACAGGCA 58.519 47.619 22.14 0.00 0.00 4.75
3652 5574 3.567478 AAGATGGATCCAACTACAGGC 57.433 47.619 23.51 4.43 0.00 4.85
3681 5603 2.030717 ACAGACTCATGTCACACTCGAC 60.031 50.000 0.00 0.00 45.20 4.20
3682 5604 2.230660 ACAGACTCATGTCACACTCGA 58.769 47.619 0.00 0.00 45.20 4.04
3695 5617 3.070748 GCCAAAAAGAGGAGACAGACTC 58.929 50.000 0.00 0.00 44.24 3.36
3702 5624 2.363306 TTGCTGCCAAAAAGAGGAGA 57.637 45.000 0.00 0.00 0.00 3.71
3705 5627 2.827921 ACCTATTGCTGCCAAAAAGAGG 59.172 45.455 8.93 8.93 34.05 3.69
3716 5638 4.256110 TCTGTGATGTCAACCTATTGCTG 58.744 43.478 0.00 0.00 35.63 4.41
3718 5640 5.124457 ACATTCTGTGATGTCAACCTATTGC 59.876 40.000 0.00 0.00 35.39 3.56
3720 5642 6.716628 ACAACATTCTGTGATGTCAACCTATT 59.283 34.615 0.00 0.00 39.34 1.73
3722 5644 5.620206 ACAACATTCTGTGATGTCAACCTA 58.380 37.500 0.00 0.00 39.34 3.08
3723 5645 4.464008 ACAACATTCTGTGATGTCAACCT 58.536 39.130 0.00 0.00 39.34 3.50
3724 5646 4.836125 ACAACATTCTGTGATGTCAACC 57.164 40.909 0.00 0.00 39.34 3.77
3763 5694 4.271049 CGTGAACAGTCAGTCAATCTTGTT 59.729 41.667 0.00 0.00 33.27 2.83
3766 5697 3.069586 TCCGTGAACAGTCAGTCAATCTT 59.930 43.478 0.00 0.00 33.27 2.40
3767 5698 2.628178 TCCGTGAACAGTCAGTCAATCT 59.372 45.455 0.00 0.00 33.27 2.40
3768 5699 3.026630 TCCGTGAACAGTCAGTCAATC 57.973 47.619 0.00 0.00 33.27 2.67
3769 5700 3.685139 ATCCGTGAACAGTCAGTCAAT 57.315 42.857 0.00 0.00 33.27 2.57
3770 5701 4.219725 TCATATCCGTGAACAGTCAGTCAA 59.780 41.667 0.00 0.00 33.27 3.18
3773 5710 5.111989 CAATCATATCCGTGAACAGTCAGT 58.888 41.667 0.00 0.00 33.27 3.41
3774 5711 5.111989 ACAATCATATCCGTGAACAGTCAG 58.888 41.667 0.00 0.00 33.27 3.51
3779 5716 7.200455 CAGTAGTACAATCATATCCGTGAACA 58.800 38.462 2.52 0.00 0.00 3.18
3783 5720 5.631096 CAGCAGTAGTACAATCATATCCGTG 59.369 44.000 2.52 0.00 0.00 4.94
3791 5728 5.616270 TGTTTTCCAGCAGTAGTACAATCA 58.384 37.500 2.52 0.00 0.00 2.57
3796 5733 6.170675 CAGAATGTTTTCCAGCAGTAGTAC 57.829 41.667 0.00 0.00 31.84 2.73
3819 5756 2.488153 AGGATAACCGAAAAGCAGCAAC 59.512 45.455 0.00 0.00 41.83 4.17
3828 5765 5.468746 CACAAGACAAGAAGGATAACCGAAA 59.531 40.000 0.00 0.00 41.83 3.46
3831 5768 3.125316 GCACAAGACAAGAAGGATAACCG 59.875 47.826 0.00 0.00 41.83 4.44
3842 5780 0.877071 AATCGCTGGCACAAGACAAG 59.123 50.000 0.00 0.00 38.70 3.16
3886 5829 1.533756 GCAAGAACGAACTGCAGCAAA 60.534 47.619 15.27 0.00 0.00 3.68
3895 5838 5.398416 GGAATAAACAGTTGCAAGAACGAAC 59.602 40.000 0.00 0.00 0.00 3.95
3908 5851 3.701040 GCACATCATGGGGAATAAACAGT 59.299 43.478 0.00 0.00 0.00 3.55
3916 5859 0.323633 CACAGGCACATCATGGGGAA 60.324 55.000 0.00 0.00 0.00 3.97
3917 5860 1.303948 CACAGGCACATCATGGGGA 59.696 57.895 0.00 0.00 0.00 4.81
3918 5861 0.612732 AACACAGGCACATCATGGGG 60.613 55.000 0.00 0.00 33.40 4.96
3920 5863 2.610976 CCAAAACACAGGCACATCATGG 60.611 50.000 0.00 0.00 0.00 3.66
3921 5864 2.036217 ACCAAAACACAGGCACATCATG 59.964 45.455 0.00 0.00 0.00 3.07
3922 5865 2.318908 ACCAAAACACAGGCACATCAT 58.681 42.857 0.00 0.00 0.00 2.45
3924 5867 2.888834 AACCAAAACACAGGCACATC 57.111 45.000 0.00 0.00 0.00 3.06
3950 5915 3.526841 AGATCTGGCAAGAGGGAGATTTT 59.473 43.478 0.00 0.00 35.37 1.82
3953 5918 2.048601 CAGATCTGGCAAGAGGGAGAT 58.951 52.381 15.38 0.00 35.37 2.75
3966 5931 0.835276 TGCTGTCCCCATCAGATCTG 59.165 55.000 17.07 17.07 35.20 2.90
4001 5966 0.111061 TCTCCAACTGTTGCTGCCAT 59.889 50.000 14.94 0.00 0.00 4.40
4023 5988 1.273048 TGTGCATTTTCCCAGCATCAC 59.727 47.619 0.00 0.00 40.78 3.06
4045 6010 8.857098 TGGATACTGTACAGAGAACCAATATAC 58.143 37.037 29.30 14.09 37.61 1.47
4048 6016 6.895756 AGTGGATACTGTACAGAGAACCAATA 59.104 38.462 29.30 8.82 35.34 1.90
4061 6029 6.125029 GGGAAGTAGTGTAGTGGATACTGTA 58.875 44.000 0.00 0.00 37.78 2.74
4065 6033 4.202131 GCTGGGAAGTAGTGTAGTGGATAC 60.202 50.000 0.00 0.00 34.72 2.24
4068 6036 2.176889 GCTGGGAAGTAGTGTAGTGGA 58.823 52.381 0.00 0.00 0.00 4.02
4071 6039 1.550976 GCTGCTGGGAAGTAGTGTAGT 59.449 52.381 0.00 0.00 0.00 2.73
4072 6040 1.550524 TGCTGCTGGGAAGTAGTGTAG 59.449 52.381 0.00 0.00 0.00 2.74
4074 6042 0.764890 TTGCTGCTGGGAAGTAGTGT 59.235 50.000 0.00 0.00 0.00 3.55
4075 6043 2.119801 ATTGCTGCTGGGAAGTAGTG 57.880 50.000 0.00 0.00 0.00 2.74
4078 6046 1.678728 CCGAATTGCTGCTGGGAAGTA 60.679 52.381 0.00 0.00 0.00 2.24
4082 6050 1.377202 GTCCGAATTGCTGCTGGGA 60.377 57.895 0.00 0.00 0.00 4.37
4100 6180 2.032549 CACCAAAAGAGTTCGCTCACTG 60.033 50.000 0.00 0.00 46.42 3.66
4101 6181 2.158957 TCACCAAAAGAGTTCGCTCACT 60.159 45.455 0.00 0.00 46.42 3.41
4102 6182 2.210116 TCACCAAAAGAGTTCGCTCAC 58.790 47.619 0.00 0.00 46.42 3.51
4103 6183 2.613026 TCACCAAAAGAGTTCGCTCA 57.387 45.000 0.00 0.00 46.42 4.26
4106 6186 3.746492 AGTACATCACCAAAAGAGTTCGC 59.254 43.478 0.00 0.00 0.00 4.70
4108 6188 5.560953 GCACAGTACATCACCAAAAGAGTTC 60.561 44.000 0.00 0.00 0.00 3.01
4109 6189 4.275936 GCACAGTACATCACCAAAAGAGTT 59.724 41.667 0.00 0.00 0.00 3.01
4110 6190 3.815401 GCACAGTACATCACCAAAAGAGT 59.185 43.478 0.00 0.00 0.00 3.24
4112 6192 3.146066 GGCACAGTACATCACCAAAAGA 58.854 45.455 0.00 0.00 0.00 2.52
4113 6193 2.095768 CGGCACAGTACATCACCAAAAG 60.096 50.000 0.00 0.00 0.00 2.27
4114 6194 1.876799 CGGCACAGTACATCACCAAAA 59.123 47.619 0.00 0.00 0.00 2.44
4115 6195 1.202710 ACGGCACAGTACATCACCAAA 60.203 47.619 0.00 0.00 0.00 3.28
4116 6196 0.394938 ACGGCACAGTACATCACCAA 59.605 50.000 0.00 0.00 0.00 3.67
4117 6197 0.320334 CACGGCACAGTACATCACCA 60.320 55.000 0.00 0.00 0.00 4.17
4118 6198 1.635663 GCACGGCACAGTACATCACC 61.636 60.000 0.00 0.00 0.00 4.02
4119 6199 0.670546 AGCACGGCACAGTACATCAC 60.671 55.000 0.00 0.00 0.00 3.06
4122 6202 1.577328 GCAAGCACGGCACAGTACAT 61.577 55.000 0.00 0.00 0.00 2.29
4124 6204 1.901650 GAGCAAGCACGGCACAGTAC 61.902 60.000 0.00 0.00 0.00 2.73
4126 6206 2.947938 AAGAGCAAGCACGGCACAGT 62.948 55.000 0.00 0.00 0.00 3.55
4127 6207 2.180131 GAAGAGCAAGCACGGCACAG 62.180 60.000 0.00 0.00 0.00 3.66
4128 6208 2.203195 AAGAGCAAGCACGGCACA 60.203 55.556 0.00 0.00 0.00 4.57
4146 6290 1.000827 AGAGTTCGCTCACTGTGACTG 60.001 52.381 6.36 2.34 46.42 3.51
4147 6291 1.323412 AGAGTTCGCTCACTGTGACT 58.677 50.000 6.36 2.43 46.42 3.41
4149 6293 2.159099 ACAAAGAGTTCGCTCACTGTGA 60.159 45.455 10.50 10.50 46.42 3.58
4150 6294 2.205074 ACAAAGAGTTCGCTCACTGTG 58.795 47.619 0.17 0.17 46.42 3.66
4151 6295 2.604046 ACAAAGAGTTCGCTCACTGT 57.396 45.000 0.00 0.00 46.42 3.55
4152 6296 3.309682 TGAAACAAAGAGTTCGCTCACTG 59.690 43.478 0.00 0.00 46.42 3.66
4153 6297 3.531538 TGAAACAAAGAGTTCGCTCACT 58.468 40.909 0.00 0.00 46.42 3.41
4154 6298 3.846383 GCTGAAACAAAGAGTTCGCTCAC 60.846 47.826 0.00 0.00 46.42 3.51
4155 6299 2.287915 GCTGAAACAAAGAGTTCGCTCA 59.712 45.455 0.00 0.00 46.42 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.