Multiple sequence alignment - TraesCS5D01G359200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G359200 chr5D 100.000 5675 0 0 1 5675 438608402 438602728 0.000000e+00 10480.0
1 TraesCS5D01G359200 chr5D 82.473 1763 270 28 3128 4874 438559148 438557409 0.000000e+00 1507.0
2 TraesCS5D01G359200 chr5D 81.662 1805 297 27 3075 4864 438521691 438519906 0.000000e+00 1469.0
3 TraesCS5D01G359200 chr5D 82.346 1637 254 27 3176 4795 438545199 438543581 0.000000e+00 1389.0
4 TraesCS5D01G359200 chr5D 83.544 1501 223 18 3181 4674 438455234 438453751 0.000000e+00 1382.0
5 TraesCS5D01G359200 chr5D 78.656 1949 353 36 728 2643 438547660 438545742 0.000000e+00 1236.0
6 TraesCS5D01G359200 chr5D 81.259 1366 229 16 971 2314 438457323 438455963 0.000000e+00 1079.0
7 TraesCS5D01G359200 chr5D 78.614 1674 292 44 711 2344 438562681 438561034 0.000000e+00 1048.0
8 TraesCS5D01G359200 chr5D 77.074 1121 203 41 3207 4289 438443388 438442284 1.050000e-166 597.0
9 TraesCS5D01G359200 chr5D 77.419 279 55 6 2378 2653 438455932 438455659 5.890000e-35 159.0
10 TraesCS5D01G359200 chr5B 96.897 3964 110 6 951 4913 533511523 533507572 0.000000e+00 6626.0
11 TraesCS5D01G359200 chr5B 82.353 1836 284 32 3048 4867 533389815 533388004 0.000000e+00 1559.0
12 TraesCS5D01G359200 chr5B 82.626 1485 219 33 3207 4681 533089154 533087699 0.000000e+00 1277.0
13 TraesCS5D01G359200 chr5B 78.966 1973 334 56 711 2650 533392222 533390298 0.000000e+00 1269.0
14 TraesCS5D01G359200 chr5B 84.076 1256 190 8 3034 4280 533383979 533382725 0.000000e+00 1203.0
15 TraesCS5D01G359200 chr5B 80.974 1561 235 42 3145 4678 533451438 533449913 0.000000e+00 1181.0
16 TraesCS5D01G359200 chr5B 78.968 1745 302 38 933 2641 533386021 533384306 0.000000e+00 1129.0
17 TraesCS5D01G359200 chr5B 79.630 1674 261 53 3059 4689 533573219 533571583 0.000000e+00 1129.0
18 TraesCS5D01G359200 chr5B 89.944 885 43 15 105 956 533512417 533511546 0.000000e+00 1099.0
19 TraesCS5D01G359200 chr5B 79.185 1595 288 25 1021 2587 533093232 533091654 0.000000e+00 1066.0
20 TraesCS5D01G359200 chr5B 76.216 1295 269 27 1053 2326 533038164 533036888 0.000000e+00 649.0
21 TraesCS5D01G359200 chr5B 90.971 443 21 5 5233 5674 533507561 533507137 3.810000e-161 579.0
22 TraesCS5D01G359200 chr5B 100.000 48 0 0 1 48 533512438 533512391 7.830000e-14 89.8
23 TraesCS5D01G359200 chr5B 97.222 36 1 0 5515 5550 533506510 533506475 1.710000e-05 62.1
24 TraesCS5D01G359200 chr5A 81.580 1835 289 41 3052 4866 554083339 554081534 0.000000e+00 1471.0
25 TraesCS5D01G359200 chr5A 77.795 1950 364 37 728 2649 554085588 554083680 0.000000e+00 1138.0
26 TraesCS5D01G359200 chr5A 77.698 1955 339 61 720 2639 554063344 554061452 0.000000e+00 1105.0
27 TraesCS5D01G359200 chr5A 74.730 1389 304 37 969 2326 554238493 554237121 1.370000e-160 577.0
28 TraesCS5D01G359200 chr5A 76.175 936 190 19 1718 2639 554140908 554139992 4.010000e-126 462.0
29 TraesCS5D01G359200 chr5A 78.700 277 55 3 2378 2653 553542943 553542670 1.260000e-41 182.0
30 TraesCS5D01G359200 chr5A 73.529 374 74 19 1970 2326 553481400 553481035 9.990000e-23 119.0
31 TraesCS5D01G359200 chrUn 82.527 1694 246 28 3034 4711 63292136 63290477 0.000000e+00 1443.0
32 TraesCS5D01G359200 chrUn 78.941 1757 295 47 899 2621 319150637 319148922 0.000000e+00 1125.0
33 TraesCS5D01G359200 chrUn 78.884 1757 295 48 899 2621 63296430 63294716 0.000000e+00 1120.0
34 TraesCS5D01G359200 chrUn 83.223 906 116 18 3814 4711 299954522 299953645 0.000000e+00 798.0
35 TraesCS5D01G359200 chrUn 74.888 1338 294 33 1000 2322 63289904 63288594 6.380000e-159 571.0
36 TraesCS5D01G359200 chrUn 74.888 1338 294 33 1000 2322 299953072 299951762 6.380000e-159 571.0
37 TraesCS5D01G359200 chrUn 97.106 311 8 1 4911 5221 287227409 287227100 1.810000e-144 523.0
38 TraesCS5D01G359200 chrUn 97.106 311 8 1 4911 5221 287479307 287478998 1.810000e-144 523.0
39 TraesCS5D01G359200 chrUn 97.106 311 8 1 4911 5221 323539946 323540255 1.810000e-144 523.0
40 TraesCS5D01G359200 chrUn 79.887 353 50 13 2275 2621 63397146 63397483 7.350000e-59 239.0
41 TraesCS5D01G359200 chrUn 93.893 131 7 1 421 550 86671352 86671482 4.490000e-46 196.0
42 TraesCS5D01G359200 chrUn 78.333 240 50 2 1868 2106 63344289 63344051 2.740000e-33 154.0
43 TraesCS5D01G359200 chrUn 78.333 240 50 2 1868 2106 313697264 313697026 2.740000e-33 154.0
44 TraesCS5D01G359200 chr2B 77.228 1515 278 45 3202 4678 65047450 65048935 0.000000e+00 824.0
45 TraesCS5D01G359200 chr2B 94.656 131 6 1 421 550 62601014 62601144 9.640000e-48 202.0
46 TraesCS5D01G359200 chr7D 98.071 311 5 1 4911 5221 94795581 94795272 1.800000e-149 540.0
47 TraesCS5D01G359200 chr3D 97.756 312 5 2 4911 5221 508553325 508553015 2.330000e-148 536.0
48 TraesCS5D01G359200 chr3D 93.939 132 7 1 421 551 87926125 87925994 1.250000e-46 198.0
49 TraesCS5D01G359200 chr2D 97.749 311 7 0 4911 5221 575765710 575766020 2.330000e-148 536.0
50 TraesCS5D01G359200 chr2D 96.541 318 8 2 4911 5228 15520203 15520517 1.810000e-144 523.0
51 TraesCS5D01G359200 chr6D 97.749 311 6 1 4911 5221 427706149 427705840 8.370000e-148 534.0
52 TraesCS5D01G359200 chr1D 95.652 322 12 2 4911 5231 475114861 475115181 3.030000e-142 516.0
53 TraesCS5D01G359200 chr1D 90.210 143 12 2 421 561 225704821 225704963 9.710000e-43 185.0
54 TraesCS5D01G359200 chr7B 93.893 131 7 1 421 550 548034843 548034713 4.490000e-46 196.0
55 TraesCS5D01G359200 chr4B 93.893 131 7 1 421 550 115040766 115040636 4.490000e-46 196.0
56 TraesCS5D01G359200 chr4D 92.647 136 9 1 421 555 334164516 334164381 1.610000e-45 195.0
57 TraesCS5D01G359200 chr1B 93.846 130 7 1 421 549 40182228 40182357 1.610000e-45 195.0
58 TraesCS5D01G359200 chr1B 97.143 35 1 0 5411 5445 1469781 1469815 6.140000e-05 60.2
59 TraesCS5D01G359200 chr2A 84.906 53 8 0 1999 2051 14692878 14692826 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G359200 chr5D 438602728 438608402 5674 True 10480.000000 10480 100.000000 1 5675 1 chr5D.!!$R3 5674
1 TraesCS5D01G359200 chr5D 438519906 438521691 1785 True 1469.000000 1469 81.662000 3075 4864 1 chr5D.!!$R2 1789
2 TraesCS5D01G359200 chr5D 438543581 438547660 4079 True 1312.500000 1389 80.501000 728 4795 2 chr5D.!!$R5 4067
3 TraesCS5D01G359200 chr5D 438557409 438562681 5272 True 1277.500000 1507 80.543500 711 4874 2 chr5D.!!$R6 4163
4 TraesCS5D01G359200 chr5D 438453751 438457323 3572 True 873.333333 1382 80.740667 971 4674 3 chr5D.!!$R4 3703
5 TraesCS5D01G359200 chr5D 438442284 438443388 1104 True 597.000000 597 77.074000 3207 4289 1 chr5D.!!$R1 1082
6 TraesCS5D01G359200 chr5B 533506475 533512438 5963 True 1691.180000 6626 95.006800 1 5674 5 chr5B.!!$R6 5673
7 TraesCS5D01G359200 chr5B 533382725 533392222 9497 True 1290.000000 1559 81.090750 711 4867 4 chr5B.!!$R5 4156
8 TraesCS5D01G359200 chr5B 533449913 533451438 1525 True 1181.000000 1181 80.974000 3145 4678 1 chr5B.!!$R2 1533
9 TraesCS5D01G359200 chr5B 533087699 533093232 5533 True 1171.500000 1277 80.905500 1021 4681 2 chr5B.!!$R4 3660
10 TraesCS5D01G359200 chr5B 533571583 533573219 1636 True 1129.000000 1129 79.630000 3059 4689 1 chr5B.!!$R3 1630
11 TraesCS5D01G359200 chr5B 533036888 533038164 1276 True 649.000000 649 76.216000 1053 2326 1 chr5B.!!$R1 1273
12 TraesCS5D01G359200 chr5A 554081534 554085588 4054 True 1304.500000 1471 79.687500 728 4866 2 chr5A.!!$R6 4138
13 TraesCS5D01G359200 chr5A 554061452 554063344 1892 True 1105.000000 1105 77.698000 720 2639 1 chr5A.!!$R3 1919
14 TraesCS5D01G359200 chr5A 554237121 554238493 1372 True 577.000000 577 74.730000 969 2326 1 chr5A.!!$R5 1357
15 TraesCS5D01G359200 chr5A 554139992 554140908 916 True 462.000000 462 76.175000 1718 2639 1 chr5A.!!$R4 921
16 TraesCS5D01G359200 chrUn 319148922 319150637 1715 True 1125.000000 1125 78.941000 899 2621 1 chrUn.!!$R5 1722
17 TraesCS5D01G359200 chrUn 63288594 63296430 7836 True 1044.666667 1443 78.766333 899 4711 3 chrUn.!!$R6 3812
18 TraesCS5D01G359200 chrUn 299951762 299954522 2760 True 684.500000 798 79.055500 1000 4711 2 chrUn.!!$R7 3711
19 TraesCS5D01G359200 chr2B 65047450 65048935 1485 False 824.000000 824 77.228000 3202 4678 1 chr2B.!!$F2 1476

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 121 0.258774 ACCAAGGTGGCTGTTCAAGT 59.741 50.000 0.00 0.0 42.67 3.16 F
121 122 0.670162 CCAAGGTGGCTGTTCAAGTG 59.330 55.000 0.00 0.0 0.00 3.16 F
1501 1591 0.693767 CCTCCCTGGGATGAAGCTCT 60.694 60.000 17.51 0.0 0.00 4.09 F
1697 1792 1.626654 AAGAGCGCAATCCAACGACG 61.627 55.000 11.47 0.0 0.00 5.12 F
1710 1808 2.432628 CGACGTGAAGCAGGGACC 60.433 66.667 0.00 0.0 0.00 4.46 F
2759 5892 0.107361 GTAATGGTAACGGGCAGCCT 60.107 55.000 12.43 0.0 42.51 4.58 F
2760 5893 1.139455 GTAATGGTAACGGGCAGCCTA 59.861 52.381 12.43 0.0 42.51 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 1792 1.168714 GACATTGGTCCCTGCTTCAC 58.831 55.000 0.0 0.0 38.12 3.18 R
1989 2093 2.224867 CCACTCCTCCATGTTTCTTGGT 60.225 50.000 0.0 0.0 35.64 3.67 R
2341 2455 0.324614 GGGGGCAAAGGTGGAAATTG 59.675 55.000 0.0 0.0 0.00 2.32 R
2702 3227 3.187637 GCTAAACCGCACACAGAAATACA 59.812 43.478 0.0 0.0 0.00 2.29 R
2974 8048 3.250040 ACCACTTGACATAGAAAACACGC 59.750 43.478 0.0 0.0 0.00 5.34 R
4143 9300 2.820787 ACGTCAGACTTGGTAGAGAAGG 59.179 50.000 0.0 0.0 0.00 3.46 R
4707 9894 3.581755 TGAGCCACACAGTTAACGATAC 58.418 45.455 0.0 0.0 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.024414 GAAGGTGGCTGTTCAAGTGTT 58.976 47.619 0.00 0.00 0.00 3.32
41 42 1.392589 AGGTGGCTGTTCAAGTGTTG 58.607 50.000 0.00 0.00 0.00 3.33
42 43 1.064758 AGGTGGCTGTTCAAGTGTTGA 60.065 47.619 0.00 0.00 38.04 3.18
43 44 1.956477 GGTGGCTGTTCAAGTGTTGAT 59.044 47.619 0.00 0.00 39.84 2.57
44 45 3.146066 GGTGGCTGTTCAAGTGTTGATA 58.854 45.455 0.00 0.00 39.84 2.15
45 46 3.058224 GGTGGCTGTTCAAGTGTTGATAC 60.058 47.826 0.00 0.00 39.84 2.24
46 47 3.815401 GTGGCTGTTCAAGTGTTGATACT 59.185 43.478 0.00 0.00 39.84 2.12
47 48 4.065088 TGGCTGTTCAAGTGTTGATACTC 58.935 43.478 0.00 0.00 39.84 2.59
48 49 4.202357 TGGCTGTTCAAGTGTTGATACTCT 60.202 41.667 0.00 0.00 39.84 3.24
49 50 4.757149 GGCTGTTCAAGTGTTGATACTCTT 59.243 41.667 0.00 0.00 39.84 2.85
50 51 5.239525 GGCTGTTCAAGTGTTGATACTCTTT 59.760 40.000 0.00 0.00 39.84 2.52
51 52 6.238759 GGCTGTTCAAGTGTTGATACTCTTTT 60.239 38.462 0.00 0.00 39.84 2.27
52 53 7.196331 GCTGTTCAAGTGTTGATACTCTTTTT 58.804 34.615 0.00 0.00 39.84 1.94
85 86 2.307496 TGGAACACCTTGCATTCCAT 57.693 45.000 13.51 0.00 45.46 3.41
86 87 1.894466 TGGAACACCTTGCATTCCATG 59.106 47.619 13.51 0.00 45.46 3.66
87 88 2.170166 GGAACACCTTGCATTCCATGA 58.830 47.619 10.52 0.00 41.40 3.07
88 89 2.762327 GGAACACCTTGCATTCCATGAT 59.238 45.455 10.52 0.00 41.40 2.45
89 90 3.196254 GGAACACCTTGCATTCCATGATT 59.804 43.478 10.52 0.00 41.40 2.57
90 91 4.402155 GGAACACCTTGCATTCCATGATTA 59.598 41.667 10.52 0.00 41.40 1.75
91 92 4.989279 ACACCTTGCATTCCATGATTAC 57.011 40.909 0.00 0.00 0.00 1.89
92 93 3.378112 ACACCTTGCATTCCATGATTACG 59.622 43.478 0.00 0.00 0.00 3.18
93 94 2.951642 ACCTTGCATTCCATGATTACGG 59.048 45.455 0.00 0.00 0.00 4.02
94 95 2.951642 CCTTGCATTCCATGATTACGGT 59.048 45.455 0.00 0.00 0.00 4.83
95 96 3.243168 CCTTGCATTCCATGATTACGGTG 60.243 47.826 0.00 0.00 0.00 4.94
96 97 2.296792 TGCATTCCATGATTACGGTGG 58.703 47.619 0.00 0.00 0.00 4.61
97 98 2.092699 TGCATTCCATGATTACGGTGGA 60.093 45.455 0.00 0.00 40.13 4.02
98 99 2.290641 GCATTCCATGATTACGGTGGAC 59.709 50.000 0.00 0.00 41.48 4.02
99 100 2.702592 TTCCATGATTACGGTGGACC 57.297 50.000 0.00 0.00 41.48 4.46
111 112 3.948719 TGGACCGACCAAGGTGGC 61.949 66.667 0.00 0.00 46.75 5.01
112 113 3.637273 GGACCGACCAAGGTGGCT 61.637 66.667 0.00 0.00 46.09 4.75
113 114 2.358737 GACCGACCAAGGTGGCTG 60.359 66.667 0.00 0.00 46.09 4.85
114 115 3.168528 ACCGACCAAGGTGGCTGT 61.169 61.111 0.00 0.00 42.67 4.40
115 116 2.113139 CCGACCAAGGTGGCTGTT 59.887 61.111 0.00 0.00 42.67 3.16
116 117 1.966451 CCGACCAAGGTGGCTGTTC 60.966 63.158 0.00 0.00 42.67 3.18
117 118 1.227823 CGACCAAGGTGGCTGTTCA 60.228 57.895 0.00 0.00 42.67 3.18
118 119 0.817634 CGACCAAGGTGGCTGTTCAA 60.818 55.000 0.00 0.00 42.67 2.69
119 120 0.954452 GACCAAGGTGGCTGTTCAAG 59.046 55.000 0.00 0.00 42.67 3.02
120 121 0.258774 ACCAAGGTGGCTGTTCAAGT 59.741 50.000 0.00 0.00 42.67 3.16
121 122 0.670162 CCAAGGTGGCTGTTCAAGTG 59.330 55.000 0.00 0.00 0.00 3.16
122 123 1.392589 CAAGGTGGCTGTTCAAGTGT 58.607 50.000 0.00 0.00 0.00 3.55
268 269 2.853914 GCTTCTGCCGTCGAACAC 59.146 61.111 0.00 0.00 0.00 3.32
291 292 0.940833 TGAATGCTGCGTTTCGTCAA 59.059 45.000 8.72 0.00 0.00 3.18
292 293 1.332065 TGAATGCTGCGTTTCGTCAAA 59.668 42.857 8.72 0.00 0.00 2.69
293 294 2.031245 TGAATGCTGCGTTTCGTCAAAT 60.031 40.909 8.72 0.00 0.00 2.32
294 295 2.704725 ATGCTGCGTTTCGTCAAATT 57.295 40.000 0.00 0.00 0.00 1.82
302 303 3.235179 GCGTTTCGTCAAATTAAGCATCG 59.765 43.478 0.00 0.00 0.00 3.84
316 317 1.741401 CATCGCTTGCTTCGGGACA 60.741 57.895 0.00 0.00 0.00 4.02
325 326 1.578206 GCTTCGGGACAAAGCACTCC 61.578 60.000 3.12 0.00 39.24 3.85
327 328 1.275291 CTTCGGGACAAAGCACTCCTA 59.725 52.381 0.00 0.00 0.00 2.94
336 337 5.648092 GGACAAAGCACTCCTACACAATTAT 59.352 40.000 0.00 0.00 0.00 1.28
363 364 2.495809 TGCTCGTGGCGGAAGTATA 58.504 52.632 0.00 0.00 45.43 1.47
486 488 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
505 507 4.830600 TGCTCCGTATGTAGTCCATATTGA 59.169 41.667 0.00 0.00 38.29 2.57
564 566 5.512473 AGTAGATAAGTTTGACGCTCGATC 58.488 41.667 0.00 0.00 0.00 3.69
576 578 0.997932 GCTCGATCTGTGTCTTGCAG 59.002 55.000 0.00 0.00 35.43 4.41
588 590 4.232221 GTGTCTTGCAGATGTGGATTTTG 58.768 43.478 0.00 0.00 0.00 2.44
599 622 6.985645 CAGATGTGGATTTTGTTTTTCTTGGA 59.014 34.615 0.00 0.00 0.00 3.53
600 623 6.986231 AGATGTGGATTTTGTTTTTCTTGGAC 59.014 34.615 0.00 0.00 0.00 4.02
608 631 4.139859 TGTTTTTCTTGGACGGTGACTA 57.860 40.909 0.00 0.00 0.00 2.59
654 688 7.617528 GCTCGAGTTATTAATATGCTCGTGTTC 60.618 40.741 28.93 19.35 46.08 3.18
670 704 3.551890 CGTGTTCTGTGTGCCTATATGTC 59.448 47.826 0.00 0.00 0.00 3.06
682 716 8.307483 GTGTGCCTATATGTCTATGTCTATTGT 58.693 37.037 0.00 0.00 0.00 2.71
685 719 9.528489 TGCCTATATGTCTATGTCTATTGTACA 57.472 33.333 0.00 0.00 0.00 2.90
784 822 4.024048 AGCTCAAATGTTAACTCCAACACG 60.024 41.667 7.22 0.00 41.02 4.49
836 879 9.319143 AGAAGTCCGAGATTTTACATTATTCAG 57.681 33.333 0.00 0.00 0.00 3.02
872 915 5.554510 CGTGATTGAACACTCATGTATACGC 60.555 44.000 0.00 0.00 38.45 4.42
997 1075 6.043411 AGTACTAAGATTTGGCTCGATCAAC 58.957 40.000 0.00 0.00 0.00 3.18
1261 1345 1.000717 GTGAAACCCCAATCACCAACG 60.001 52.381 0.00 0.00 40.00 4.10
1377 1467 1.755395 CATGACCACTGCCATGGGG 60.755 63.158 15.13 8.64 44.81 4.96
1379 1469 1.803453 ATGACCACTGCCATGGGGTT 61.803 55.000 15.13 0.00 44.81 4.11
1384 1474 1.075482 ACTGCCATGGGGTTGTCTG 59.925 57.895 15.13 2.03 36.17 3.51
1501 1591 0.693767 CCTCCCTGGGATGAAGCTCT 60.694 60.000 17.51 0.00 0.00 4.09
1697 1792 1.626654 AAGAGCGCAATCCAACGACG 61.627 55.000 11.47 0.00 0.00 5.12
1710 1808 2.432628 CGACGTGAAGCAGGGACC 60.433 66.667 0.00 0.00 0.00 4.46
2758 5891 0.393267 TGTAATGGTAACGGGCAGCC 60.393 55.000 1.26 1.26 42.51 4.85
2759 5892 0.107361 GTAATGGTAACGGGCAGCCT 60.107 55.000 12.43 0.00 42.51 4.58
2760 5893 1.139455 GTAATGGTAACGGGCAGCCTA 59.861 52.381 12.43 0.00 42.51 3.93
2827 5971 4.637534 ACATGTTCATCATAGAGGTTGCAC 59.362 41.667 0.00 0.00 34.67 4.57
3041 8119 2.364002 TGACTGTGTTCTGATTGTCCGA 59.636 45.455 0.00 0.00 0.00 4.55
3438 8539 9.227777 GGTAGTTTGTTCAATATGTAGTTCCTT 57.772 33.333 0.00 0.00 0.00 3.36
4143 9300 2.357009 CTGAGTATGCAATGGAAGGCAC 59.643 50.000 0.00 0.00 43.75 5.01
4639 9819 8.424918 TCAGAAATAATATCCAGACTTCTGTCC 58.575 37.037 5.53 0.00 43.91 4.02
4678 9858 3.007290 TCAGATAGAGGGGCGATGAAATG 59.993 47.826 0.00 0.00 0.00 2.32
4780 9970 7.857456 AGGACCAAATAGTGATGTAACATGTA 58.143 34.615 0.00 0.00 0.00 2.29
4848 10038 4.260784 CGTTTCTGGCCTCAATATAACAGC 60.261 45.833 3.32 0.00 0.00 4.40
4913 10103 9.117145 CAATACTAAGTTACATGCACAAAAGTG 57.883 33.333 0.00 0.00 0.00 3.16
4914 10104 6.693315 ACTAAGTTACATGCACAAAAGTGT 57.307 33.333 0.00 0.00 39.07 3.55
4915 10105 6.725246 ACTAAGTTACATGCACAAAAGTGTC 58.275 36.000 0.00 0.00 35.07 3.67
4916 10106 4.209452 AGTTACATGCACAAAAGTGTCG 57.791 40.909 0.00 0.00 35.07 4.35
4917 10107 2.679355 TACATGCACAAAAGTGTCGC 57.321 45.000 0.00 0.00 35.07 5.19
4918 10108 1.024271 ACATGCACAAAAGTGTCGCT 58.976 45.000 0.00 0.00 35.07 4.93
4919 10109 1.405105 ACATGCACAAAAGTGTCGCTT 59.595 42.857 0.00 0.00 35.07 4.68
4920 10110 2.046313 CATGCACAAAAGTGTCGCTTC 58.954 47.619 0.00 0.00 35.07 3.86
4921 10111 0.380378 TGCACAAAAGTGTCGCTTCC 59.620 50.000 0.00 0.00 35.07 3.46
4922 10112 0.663153 GCACAAAAGTGTCGCTTCCT 59.337 50.000 0.00 0.00 35.07 3.36
4923 10113 1.065551 GCACAAAAGTGTCGCTTCCTT 59.934 47.619 0.00 0.00 35.07 3.36
4924 10114 2.854805 GCACAAAAGTGTCGCTTCCTTC 60.855 50.000 0.00 0.00 35.07 3.46
4925 10115 1.597663 ACAAAAGTGTCGCTTCCTTCG 59.402 47.619 0.00 0.00 36.17 3.79
4926 10116 1.597663 CAAAAGTGTCGCTTCCTTCGT 59.402 47.619 0.00 0.00 36.17 3.85
4927 10117 1.217882 AAAGTGTCGCTTCCTTCGTG 58.782 50.000 0.00 0.00 36.17 4.35
4928 10118 0.387929 AAGTGTCGCTTCCTTCGTGA 59.612 50.000 0.00 0.00 30.06 4.35
4929 10119 0.387929 AGTGTCGCTTCCTTCGTGAA 59.612 50.000 0.00 0.00 0.00 3.18
4930 10120 0.784778 GTGTCGCTTCCTTCGTGAAG 59.215 55.000 2.57 2.57 43.71 3.02
4940 10130 1.779569 CTTCGTGAAGGCGTTACTGT 58.220 50.000 1.57 0.00 34.87 3.55
4941 10131 2.132762 CTTCGTGAAGGCGTTACTGTT 58.867 47.619 1.57 0.00 34.87 3.16
4942 10132 1.493772 TCGTGAAGGCGTTACTGTTG 58.506 50.000 0.00 0.00 0.00 3.33
4943 10133 1.067364 TCGTGAAGGCGTTACTGTTGA 59.933 47.619 0.00 0.00 0.00 3.18
4944 10134 1.862201 CGTGAAGGCGTTACTGTTGAA 59.138 47.619 0.00 0.00 0.00 2.69
4945 10135 2.096909 CGTGAAGGCGTTACTGTTGAAG 60.097 50.000 0.00 0.00 0.00 3.02
4946 10136 2.870411 GTGAAGGCGTTACTGTTGAAGT 59.130 45.455 0.00 0.00 43.40 3.01
4947 10137 3.311596 GTGAAGGCGTTACTGTTGAAGTT 59.688 43.478 0.00 0.00 40.56 2.66
4948 10138 3.558418 TGAAGGCGTTACTGTTGAAGTTC 59.442 43.478 0.00 0.00 40.56 3.01
4949 10139 2.490991 AGGCGTTACTGTTGAAGTTCC 58.509 47.619 0.00 0.00 40.56 3.62
4950 10140 2.104281 AGGCGTTACTGTTGAAGTTCCT 59.896 45.455 0.00 0.00 40.56 3.36
4951 10141 2.479275 GGCGTTACTGTTGAAGTTCCTC 59.521 50.000 0.00 0.00 40.56 3.71
4952 10142 2.155155 GCGTTACTGTTGAAGTTCCTCG 59.845 50.000 0.00 0.00 40.56 4.63
4953 10143 3.378339 CGTTACTGTTGAAGTTCCTCGT 58.622 45.455 0.00 0.00 40.56 4.18
4954 10144 3.424529 CGTTACTGTTGAAGTTCCTCGTC 59.575 47.826 0.00 0.00 40.56 4.20
4955 10145 4.365723 GTTACTGTTGAAGTTCCTCGTCA 58.634 43.478 0.00 0.00 40.56 4.35
4956 10146 3.753294 ACTGTTGAAGTTCCTCGTCAT 57.247 42.857 0.00 0.00 34.57 3.06
4957 10147 3.654414 ACTGTTGAAGTTCCTCGTCATC 58.346 45.455 0.00 0.00 34.57 2.92
4958 10148 3.069586 ACTGTTGAAGTTCCTCGTCATCA 59.930 43.478 0.00 0.00 34.57 3.07
4959 10149 4.248859 CTGTTGAAGTTCCTCGTCATCAT 58.751 43.478 0.00 0.00 35.18 2.45
4960 10150 3.996363 TGTTGAAGTTCCTCGTCATCATG 59.004 43.478 0.00 0.00 34.83 3.07
4961 10151 3.961480 TGAAGTTCCTCGTCATCATGT 57.039 42.857 0.00 0.00 30.27 3.21
4962 10152 3.588955 TGAAGTTCCTCGTCATCATGTG 58.411 45.455 0.00 0.00 30.27 3.21
4963 10153 2.680312 AGTTCCTCGTCATCATGTGG 57.320 50.000 0.00 0.00 0.00 4.17
4964 10154 1.902508 AGTTCCTCGTCATCATGTGGT 59.097 47.619 0.00 0.00 0.00 4.16
4965 10155 2.002586 GTTCCTCGTCATCATGTGGTG 58.997 52.381 0.00 0.00 0.00 4.17
4966 10156 1.266178 TCCTCGTCATCATGTGGTGT 58.734 50.000 0.00 0.00 0.00 4.16
4967 10157 1.204704 TCCTCGTCATCATGTGGTGTC 59.795 52.381 0.00 0.00 0.00 3.67
4968 10158 1.066929 CCTCGTCATCATGTGGTGTCA 60.067 52.381 0.00 0.00 0.00 3.58
4969 10159 2.612721 CCTCGTCATCATGTGGTGTCAA 60.613 50.000 0.00 0.00 0.00 3.18
4970 10160 3.264947 CTCGTCATCATGTGGTGTCAAT 58.735 45.455 0.00 0.00 0.00 2.57
4971 10161 3.002102 TCGTCATCATGTGGTGTCAATG 58.998 45.455 0.00 0.00 0.00 2.82
4972 10162 2.096335 CGTCATCATGTGGTGTCAATGG 59.904 50.000 0.00 0.00 0.00 3.16
4973 10163 3.084039 GTCATCATGTGGTGTCAATGGT 58.916 45.455 0.00 0.00 0.00 3.55
4974 10164 3.507233 GTCATCATGTGGTGTCAATGGTT 59.493 43.478 0.00 0.00 0.00 3.67
4975 10165 3.506844 TCATCATGTGGTGTCAATGGTTG 59.493 43.478 0.00 0.00 0.00 3.77
4976 10166 2.237643 TCATGTGGTGTCAATGGTTGG 58.762 47.619 0.00 0.00 0.00 3.77
4977 10167 1.962807 CATGTGGTGTCAATGGTTGGT 59.037 47.619 0.00 0.00 0.00 3.67
4978 10168 1.397672 TGTGGTGTCAATGGTTGGTG 58.602 50.000 0.00 0.00 0.00 4.17
4979 10169 0.031994 GTGGTGTCAATGGTTGGTGC 59.968 55.000 0.00 0.00 0.00 5.01
4980 10170 1.285641 GGTGTCAATGGTTGGTGCG 59.714 57.895 0.00 0.00 0.00 5.34
4981 10171 1.169661 GGTGTCAATGGTTGGTGCGA 61.170 55.000 0.00 0.00 0.00 5.10
4982 10172 0.665835 GTGTCAATGGTTGGTGCGAA 59.334 50.000 0.00 0.00 0.00 4.70
4983 10173 1.269448 GTGTCAATGGTTGGTGCGAAT 59.731 47.619 0.00 0.00 0.00 3.34
4984 10174 2.486203 GTGTCAATGGTTGGTGCGAATA 59.514 45.455 0.00 0.00 0.00 1.75
4985 10175 3.128589 GTGTCAATGGTTGGTGCGAATAT 59.871 43.478 0.00 0.00 0.00 1.28
4986 10176 3.128415 TGTCAATGGTTGGTGCGAATATG 59.872 43.478 0.00 0.00 0.00 1.78
4987 10177 2.687425 TCAATGGTTGGTGCGAATATGG 59.313 45.455 0.00 0.00 0.00 2.74
4988 10178 2.426738 CAATGGTTGGTGCGAATATGGT 59.573 45.455 0.00 0.00 0.00 3.55
4989 10179 1.745232 TGGTTGGTGCGAATATGGTC 58.255 50.000 0.00 0.00 0.00 4.02
4990 10180 1.280710 TGGTTGGTGCGAATATGGTCT 59.719 47.619 0.00 0.00 0.00 3.85
4991 10181 1.940613 GGTTGGTGCGAATATGGTCTC 59.059 52.381 0.00 0.00 0.00 3.36
4992 10182 2.627945 GTTGGTGCGAATATGGTCTCA 58.372 47.619 0.00 0.00 0.00 3.27
4993 10183 2.602257 TGGTGCGAATATGGTCTCAG 57.398 50.000 0.00 0.00 0.00 3.35
4994 10184 1.831106 TGGTGCGAATATGGTCTCAGT 59.169 47.619 0.00 0.00 0.00 3.41
4995 10185 2.236146 TGGTGCGAATATGGTCTCAGTT 59.764 45.455 0.00 0.00 0.00 3.16
4996 10186 2.609459 GGTGCGAATATGGTCTCAGTTG 59.391 50.000 0.00 0.00 0.00 3.16
4997 10187 3.262420 GTGCGAATATGGTCTCAGTTGT 58.738 45.455 0.00 0.00 0.00 3.32
4998 10188 4.430007 GTGCGAATATGGTCTCAGTTGTA 58.570 43.478 0.00 0.00 0.00 2.41
4999 10189 4.504461 GTGCGAATATGGTCTCAGTTGTAG 59.496 45.833 0.00 0.00 0.00 2.74
5000 10190 4.159693 TGCGAATATGGTCTCAGTTGTAGT 59.840 41.667 0.00 0.00 0.00 2.73
5001 10191 5.109903 GCGAATATGGTCTCAGTTGTAGTT 58.890 41.667 0.00 0.00 0.00 2.24
5002 10192 5.581085 GCGAATATGGTCTCAGTTGTAGTTT 59.419 40.000 0.00 0.00 0.00 2.66
5003 10193 6.455646 GCGAATATGGTCTCAGTTGTAGTTTG 60.456 42.308 0.00 0.00 0.00 2.93
5004 10194 6.590292 CGAATATGGTCTCAGTTGTAGTTTGT 59.410 38.462 0.00 0.00 0.00 2.83
5005 10195 7.201444 CGAATATGGTCTCAGTTGTAGTTTGTC 60.201 40.741 0.00 0.00 0.00 3.18
5006 10196 3.713288 TGGTCTCAGTTGTAGTTTGTCG 58.287 45.455 0.00 0.00 0.00 4.35
5007 10197 3.382227 TGGTCTCAGTTGTAGTTTGTCGA 59.618 43.478 0.00 0.00 0.00 4.20
5008 10198 4.038763 TGGTCTCAGTTGTAGTTTGTCGAT 59.961 41.667 0.00 0.00 0.00 3.59
5009 10199 4.621886 GGTCTCAGTTGTAGTTTGTCGATC 59.378 45.833 0.00 0.00 0.00 3.69
5010 10200 5.220381 GTCTCAGTTGTAGTTTGTCGATCA 58.780 41.667 0.00 0.00 0.00 2.92
5011 10201 5.117287 GTCTCAGTTGTAGTTTGTCGATCAC 59.883 44.000 0.00 0.00 0.00 3.06
5012 10202 5.009710 TCTCAGTTGTAGTTTGTCGATCACT 59.990 40.000 0.00 0.00 0.00 3.41
5013 10203 4.982295 TCAGTTGTAGTTTGTCGATCACTG 59.018 41.667 0.00 0.00 0.00 3.66
5014 10204 4.982295 CAGTTGTAGTTTGTCGATCACTGA 59.018 41.667 0.00 0.00 0.00 3.41
5015 10205 5.635280 CAGTTGTAGTTTGTCGATCACTGAT 59.365 40.000 0.00 0.00 0.00 2.90
5016 10206 5.864474 AGTTGTAGTTTGTCGATCACTGATC 59.136 40.000 8.78 8.78 35.88 2.92
5017 10207 5.385509 TGTAGTTTGTCGATCACTGATCA 57.614 39.130 17.43 0.00 38.84 2.92
5018 10208 5.402398 TGTAGTTTGTCGATCACTGATCAG 58.598 41.667 21.37 21.37 38.84 2.90
5019 10209 4.790765 AGTTTGTCGATCACTGATCAGA 57.209 40.909 29.27 8.51 38.84 3.27
5020 10210 5.336150 AGTTTGTCGATCACTGATCAGAT 57.664 39.130 29.27 13.34 38.84 2.90
5021 10211 5.347342 AGTTTGTCGATCACTGATCAGATC 58.653 41.667 29.27 19.84 38.84 2.75
5054 10244 4.073052 TTTTTCTCGCCCGCACAT 57.927 50.000 0.00 0.00 0.00 3.21
5055 10245 3.234979 TTTTTCTCGCCCGCACATA 57.765 47.368 0.00 0.00 0.00 2.29
5056 10246 1.083489 TTTTTCTCGCCCGCACATAG 58.917 50.000 0.00 0.00 0.00 2.23
5057 10247 1.366111 TTTTCTCGCCCGCACATAGC 61.366 55.000 0.00 0.00 40.87 2.97
5058 10248 2.238847 TTTCTCGCCCGCACATAGCT 62.239 55.000 0.00 0.00 42.61 3.32
5059 10249 2.202932 CTCGCCCGCACATAGCTT 60.203 61.111 0.00 0.00 42.61 3.74
5060 10250 1.815421 CTCGCCCGCACATAGCTTT 60.815 57.895 0.00 0.00 42.61 3.51
5061 10251 1.369091 CTCGCCCGCACATAGCTTTT 61.369 55.000 0.00 0.00 42.61 2.27
5062 10252 1.226379 CGCCCGCACATAGCTTTTG 60.226 57.895 0.00 0.00 42.61 2.44
5063 10253 1.139520 GCCCGCACATAGCTTTTGG 59.860 57.895 0.00 0.00 42.61 3.28
5064 10254 1.595093 GCCCGCACATAGCTTTTGGT 61.595 55.000 0.00 0.00 42.61 3.67
5065 10255 0.451783 CCCGCACATAGCTTTTGGTC 59.548 55.000 0.00 0.00 42.61 4.02
5066 10256 1.453155 CCGCACATAGCTTTTGGTCT 58.547 50.000 0.00 0.00 42.61 3.85
5067 10257 1.812571 CCGCACATAGCTTTTGGTCTT 59.187 47.619 0.00 0.00 42.61 3.01
5068 10258 3.006940 CCGCACATAGCTTTTGGTCTTA 58.993 45.455 0.00 0.00 42.61 2.10
5069 10259 3.627577 CCGCACATAGCTTTTGGTCTTAT 59.372 43.478 0.00 0.00 42.61 1.73
5070 10260 4.496341 CCGCACATAGCTTTTGGTCTTATG 60.496 45.833 0.00 0.00 42.61 1.90
5071 10261 4.332543 CGCACATAGCTTTTGGTCTTATGA 59.667 41.667 0.00 0.00 42.61 2.15
5072 10262 5.573146 GCACATAGCTTTTGGTCTTATGAC 58.427 41.667 0.00 0.10 40.34 3.06
5073 10263 5.355350 GCACATAGCTTTTGGTCTTATGACT 59.645 40.000 8.51 0.00 40.64 3.41
5074 10264 6.127897 GCACATAGCTTTTGGTCTTATGACTT 60.128 38.462 8.51 0.00 40.64 3.01
5075 10265 7.575720 GCACATAGCTTTTGGTCTTATGACTTT 60.576 37.037 8.51 0.00 40.64 2.66
5076 10266 7.752239 CACATAGCTTTTGGTCTTATGACTTTG 59.248 37.037 8.51 0.00 42.54 2.77
5077 10267 5.126396 AGCTTTTGGTCTTATGACTTTGC 57.874 39.130 8.51 6.66 42.54 3.68
5078 10268 4.829492 AGCTTTTGGTCTTATGACTTTGCT 59.171 37.500 8.51 8.38 42.54 3.91
5079 10269 6.003950 AGCTTTTGGTCTTATGACTTTGCTA 58.996 36.000 8.51 0.00 42.54 3.49
5080 10270 6.150140 AGCTTTTGGTCTTATGACTTTGCTAG 59.850 38.462 8.51 0.00 42.54 3.42
5081 10271 6.072452 GCTTTTGGTCTTATGACTTTGCTAGT 60.072 38.462 8.51 0.00 42.54 2.57
5082 10272 7.522236 GCTTTTGGTCTTATGACTTTGCTAGTT 60.522 37.037 8.51 0.00 42.54 2.24
5083 10273 6.801539 TTGGTCTTATGACTTTGCTAGTTG 57.198 37.500 8.51 0.00 42.54 3.16
5084 10274 4.695455 TGGTCTTATGACTTTGCTAGTTGC 59.305 41.667 8.51 0.00 42.54 4.17
5085 10275 4.201724 GGTCTTATGACTTTGCTAGTTGCG 60.202 45.833 8.51 0.00 42.81 4.85
5086 10276 3.932710 TCTTATGACTTTGCTAGTTGCGG 59.067 43.478 0.00 0.00 46.63 5.69
5087 10277 1.453155 ATGACTTTGCTAGTTGCGGG 58.547 50.000 0.00 0.00 46.63 6.13
5088 10278 0.107831 TGACTTTGCTAGTTGCGGGT 59.892 50.000 0.00 0.00 46.63 5.28
5089 10279 1.345089 TGACTTTGCTAGTTGCGGGTA 59.655 47.619 0.00 0.00 46.63 3.69
5090 10280 2.027561 TGACTTTGCTAGTTGCGGGTAT 60.028 45.455 0.00 0.00 46.63 2.73
5091 10281 2.351726 GACTTTGCTAGTTGCGGGTATG 59.648 50.000 0.00 0.00 46.63 2.39
5092 10282 2.290071 ACTTTGCTAGTTGCGGGTATGT 60.290 45.455 0.00 0.00 46.63 2.29
5093 10283 2.483014 TTGCTAGTTGCGGGTATGTT 57.517 45.000 0.00 0.00 46.63 2.71
5094 10284 2.483014 TGCTAGTTGCGGGTATGTTT 57.517 45.000 0.00 0.00 46.63 2.83
5095 10285 2.352388 TGCTAGTTGCGGGTATGTTTC 58.648 47.619 0.00 0.00 46.63 2.78
5096 10286 1.669265 GCTAGTTGCGGGTATGTTTCC 59.331 52.381 0.00 0.00 0.00 3.13
5097 10287 2.937873 GCTAGTTGCGGGTATGTTTCCA 60.938 50.000 0.00 0.00 0.00 3.53
5098 10288 1.530323 AGTTGCGGGTATGTTTCCAC 58.470 50.000 0.00 0.00 0.00 4.02
5099 10289 0.167251 GTTGCGGGTATGTTTCCACG 59.833 55.000 0.00 0.00 0.00 4.94
5100 10290 0.250381 TTGCGGGTATGTTTCCACGT 60.250 50.000 0.00 0.00 0.00 4.49
5101 10291 0.951525 TGCGGGTATGTTTCCACGTG 60.952 55.000 9.08 9.08 0.00 4.49
5102 10292 0.671163 GCGGGTATGTTTCCACGTGA 60.671 55.000 19.30 0.00 0.00 4.35
5103 10293 1.355971 CGGGTATGTTTCCACGTGAG 58.644 55.000 19.30 7.45 0.00 3.51
5115 10305 2.775351 ACGTGAGTGTGTTGGGTTG 58.225 52.632 0.00 0.00 46.97 3.77
5116 10306 0.746563 ACGTGAGTGTGTTGGGTTGG 60.747 55.000 0.00 0.00 46.97 3.77
5117 10307 1.733526 GTGAGTGTGTTGGGTTGGC 59.266 57.895 0.00 0.00 0.00 4.52
5118 10308 0.751643 GTGAGTGTGTTGGGTTGGCT 60.752 55.000 0.00 0.00 0.00 4.75
5119 10309 0.751277 TGAGTGTGTTGGGTTGGCTG 60.751 55.000 0.00 0.00 0.00 4.85
5120 10310 0.751643 GAGTGTGTTGGGTTGGCTGT 60.752 55.000 0.00 0.00 0.00 4.40
5121 10311 1.037030 AGTGTGTTGGGTTGGCTGTG 61.037 55.000 0.00 0.00 0.00 3.66
5122 10312 1.000270 TGTGTTGGGTTGGCTGTGT 60.000 52.632 0.00 0.00 0.00 3.72
5123 10313 1.318886 TGTGTTGGGTTGGCTGTGTG 61.319 55.000 0.00 0.00 0.00 3.82
5124 10314 2.417097 GTTGGGTTGGCTGTGTGC 59.583 61.111 0.00 0.00 41.94 4.57
5125 10315 2.043551 TTGGGTTGGCTGTGTGCA 60.044 55.556 0.00 0.00 45.15 4.57
5126 10316 1.457267 TTGGGTTGGCTGTGTGCAT 60.457 52.632 0.00 0.00 45.15 3.96
5127 10317 1.462731 TTGGGTTGGCTGTGTGCATC 61.463 55.000 0.00 0.00 45.15 3.91
5128 10318 2.639327 GGGTTGGCTGTGTGCATCC 61.639 63.158 0.00 0.00 45.15 3.51
5129 10319 1.604593 GGTTGGCTGTGTGCATCCT 60.605 57.895 0.00 0.00 45.15 3.24
5130 10320 0.322456 GGTTGGCTGTGTGCATCCTA 60.322 55.000 0.00 0.00 45.15 2.94
5131 10321 1.089920 GTTGGCTGTGTGCATCCTAG 58.910 55.000 0.00 0.00 45.15 3.02
5132 10322 0.692476 TTGGCTGTGTGCATCCTAGT 59.308 50.000 0.00 0.00 45.15 2.57
5133 10323 0.692476 TGGCTGTGTGCATCCTAGTT 59.308 50.000 0.00 0.00 45.15 2.24
5134 10324 1.905894 TGGCTGTGTGCATCCTAGTTA 59.094 47.619 0.00 0.00 45.15 2.24
5135 10325 2.505407 TGGCTGTGTGCATCCTAGTTAT 59.495 45.455 0.00 0.00 45.15 1.89
5136 10326 2.874701 GGCTGTGTGCATCCTAGTTATG 59.125 50.000 0.00 0.00 45.15 1.90
5144 10334 3.051081 CATCCTAGTTATGCAGAGGCC 57.949 52.381 0.00 0.00 40.13 5.19
5145 10335 1.040646 TCCTAGTTATGCAGAGGCCG 58.959 55.000 0.00 0.00 40.13 6.13
5146 10336 0.034059 CCTAGTTATGCAGAGGCCGG 59.966 60.000 0.00 0.00 40.13 6.13
5147 10337 0.034059 CTAGTTATGCAGAGGCCGGG 59.966 60.000 2.18 0.00 40.13 5.73
5148 10338 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
5149 10339 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
5150 10340 2.297895 TTATGCAGAGGCCGGGTGT 61.298 57.895 2.18 0.00 40.13 4.16
5151 10341 2.535485 TTATGCAGAGGCCGGGTGTG 62.535 60.000 2.18 0.00 40.13 3.82
5158 10348 4.722700 GGCCGGGTGTGTGCTCAT 62.723 66.667 2.18 0.00 0.00 2.90
5159 10349 2.672996 GCCGGGTGTGTGCTCATT 60.673 61.111 2.18 0.00 0.00 2.57
5160 10350 2.981560 GCCGGGTGTGTGCTCATTG 61.982 63.158 2.18 0.00 0.00 2.82
5161 10351 1.600636 CCGGGTGTGTGCTCATTGT 60.601 57.895 0.00 0.00 0.00 2.71
5162 10352 0.321210 CCGGGTGTGTGCTCATTGTA 60.321 55.000 0.00 0.00 0.00 2.41
5163 10353 1.678728 CCGGGTGTGTGCTCATTGTAT 60.679 52.381 0.00 0.00 0.00 2.29
5164 10354 2.083774 CGGGTGTGTGCTCATTGTATT 58.916 47.619 0.00 0.00 0.00 1.89
5165 10355 3.266636 CGGGTGTGTGCTCATTGTATTA 58.733 45.455 0.00 0.00 0.00 0.98
5166 10356 3.876914 CGGGTGTGTGCTCATTGTATTAT 59.123 43.478 0.00 0.00 0.00 1.28
5167 10357 4.260743 CGGGTGTGTGCTCATTGTATTATG 60.261 45.833 0.00 0.00 0.00 1.90
5168 10358 4.640201 GGGTGTGTGCTCATTGTATTATGT 59.360 41.667 0.00 0.00 0.00 2.29
5169 10359 5.820423 GGGTGTGTGCTCATTGTATTATGTA 59.180 40.000 0.00 0.00 0.00 2.29
5170 10360 6.486657 GGGTGTGTGCTCATTGTATTATGTAT 59.513 38.462 0.00 0.00 0.00 2.29
5171 10361 7.307989 GGGTGTGTGCTCATTGTATTATGTATC 60.308 40.741 0.00 0.00 0.00 2.24
5172 10362 7.307989 GGTGTGTGCTCATTGTATTATGTATCC 60.308 40.741 0.00 0.00 0.00 2.59
5173 10363 7.442364 GTGTGTGCTCATTGTATTATGTATCCT 59.558 37.037 0.00 0.00 0.00 3.24
5174 10364 7.657354 TGTGTGCTCATTGTATTATGTATCCTC 59.343 37.037 0.00 0.00 0.00 3.71
5175 10365 7.875041 GTGTGCTCATTGTATTATGTATCCTCT 59.125 37.037 0.00 0.00 0.00 3.69
5176 10366 8.432013 TGTGCTCATTGTATTATGTATCCTCTT 58.568 33.333 0.00 0.00 0.00 2.85
5177 10367 8.715998 GTGCTCATTGTATTATGTATCCTCTTG 58.284 37.037 0.00 0.00 0.00 3.02
5178 10368 8.650490 TGCTCATTGTATTATGTATCCTCTTGA 58.350 33.333 0.00 0.00 0.00 3.02
5179 10369 9.664332 GCTCATTGTATTATGTATCCTCTTGAT 57.336 33.333 0.00 0.00 37.49 2.57
5181 10371 9.440773 TCATTGTATTATGTATCCTCTTGATGC 57.559 33.333 0.00 0.00 36.68 3.91
5182 10372 9.445878 CATTGTATTATGTATCCTCTTGATGCT 57.554 33.333 0.00 0.00 37.04 3.79
5183 10373 9.664332 ATTGTATTATGTATCCTCTTGATGCTC 57.336 33.333 0.00 0.00 37.04 4.26
5184 10374 7.615403 TGTATTATGTATCCTCTTGATGCTCC 58.385 38.462 0.00 0.00 37.04 4.70
5185 10375 6.692849 ATTATGTATCCTCTTGATGCTCCA 57.307 37.500 0.00 0.00 37.04 3.86
5186 10376 6.692849 TTATGTATCCTCTTGATGCTCCAT 57.307 37.500 0.00 0.00 37.04 3.41
5187 10377 5.579753 ATGTATCCTCTTGATGCTCCATT 57.420 39.130 0.00 0.00 37.04 3.16
5188 10378 5.378230 TGTATCCTCTTGATGCTCCATTT 57.622 39.130 0.00 0.00 37.04 2.32
5189 10379 5.759059 TGTATCCTCTTGATGCTCCATTTT 58.241 37.500 0.00 0.00 37.04 1.82
5190 10380 6.899089 TGTATCCTCTTGATGCTCCATTTTA 58.101 36.000 0.00 0.00 37.04 1.52
5191 10381 7.345691 TGTATCCTCTTGATGCTCCATTTTAA 58.654 34.615 0.00 0.00 37.04 1.52
5192 10382 6.956202 ATCCTCTTGATGCTCCATTTTAAG 57.044 37.500 0.00 0.00 30.54 1.85
5193 10383 4.641989 TCCTCTTGATGCTCCATTTTAAGC 59.358 41.667 0.00 0.00 39.02 3.09
5194 10384 4.202090 CCTCTTGATGCTCCATTTTAAGCC 60.202 45.833 0.00 0.00 37.73 4.35
5195 10385 4.343231 TCTTGATGCTCCATTTTAAGCCA 58.657 39.130 0.00 0.00 37.73 4.75
5196 10386 4.771577 TCTTGATGCTCCATTTTAAGCCAA 59.228 37.500 0.00 0.00 37.73 4.52
5197 10387 5.422970 TCTTGATGCTCCATTTTAAGCCAAT 59.577 36.000 0.00 0.00 37.73 3.16
5198 10388 6.606796 TCTTGATGCTCCATTTTAAGCCAATA 59.393 34.615 0.00 0.00 37.73 1.90
5199 10389 6.788598 TGATGCTCCATTTTAAGCCAATAA 57.211 33.333 0.00 0.00 37.73 1.40
5200 10390 7.180322 TGATGCTCCATTTTAAGCCAATAAA 57.820 32.000 0.00 0.00 37.73 1.40
5201 10391 7.267128 TGATGCTCCATTTTAAGCCAATAAAG 58.733 34.615 0.00 0.00 37.73 1.85
5202 10392 6.603940 TGCTCCATTTTAAGCCAATAAAGT 57.396 33.333 0.00 0.00 37.73 2.66
5203 10393 6.630071 TGCTCCATTTTAAGCCAATAAAGTC 58.370 36.000 0.00 0.00 37.73 3.01
5204 10394 6.042777 GCTCCATTTTAAGCCAATAAAGTCC 58.957 40.000 0.00 0.00 32.22 3.85
5205 10395 6.350949 GCTCCATTTTAAGCCAATAAAGTCCA 60.351 38.462 0.00 0.00 32.22 4.02
5206 10396 6.930731 TCCATTTTAAGCCAATAAAGTCCAC 58.069 36.000 0.00 0.00 0.00 4.02
5207 10397 6.071051 TCCATTTTAAGCCAATAAAGTCCACC 60.071 38.462 0.00 0.00 0.00 4.61
5208 10398 5.731957 TTTTAAGCCAATAAAGTCCACCC 57.268 39.130 0.00 0.00 0.00 4.61
5209 10399 4.668138 TTAAGCCAATAAAGTCCACCCT 57.332 40.909 0.00 0.00 0.00 4.34
5210 10400 3.542969 AAGCCAATAAAGTCCACCCTT 57.457 42.857 0.00 0.00 0.00 3.95
5211 10401 3.542969 AGCCAATAAAGTCCACCCTTT 57.457 42.857 0.00 0.00 38.23 3.11
5212 10402 3.165071 AGCCAATAAAGTCCACCCTTTG 58.835 45.455 0.00 0.00 36.18 2.77
5213 10403 2.897326 GCCAATAAAGTCCACCCTTTGT 59.103 45.455 0.00 0.00 36.18 2.83
5214 10404 3.056821 GCCAATAAAGTCCACCCTTTGTC 60.057 47.826 0.00 0.00 36.18 3.18
5215 10405 3.190535 CCAATAAAGTCCACCCTTTGTCG 59.809 47.826 0.00 0.00 36.18 4.35
5216 10406 4.069304 CAATAAAGTCCACCCTTTGTCGA 58.931 43.478 0.00 0.00 36.18 4.20
5217 10407 2.721425 AAAGTCCACCCTTTGTCGAA 57.279 45.000 0.00 0.00 33.50 3.71
5218 10408 2.721425 AAGTCCACCCTTTGTCGAAA 57.279 45.000 0.00 0.00 0.00 3.46
5219 10409 2.721425 AGTCCACCCTTTGTCGAAAA 57.279 45.000 0.00 0.00 0.00 2.29
5220 10410 3.007473 AGTCCACCCTTTGTCGAAAAA 57.993 42.857 0.00 0.00 0.00 1.94
5221 10411 2.949644 AGTCCACCCTTTGTCGAAAAAG 59.050 45.455 19.44 19.44 36.99 2.27
5222 10412 2.686405 GTCCACCCTTTGTCGAAAAAGT 59.314 45.455 23.31 7.17 35.73 2.66
5223 10413 3.878699 GTCCACCCTTTGTCGAAAAAGTA 59.121 43.478 23.31 4.33 35.73 2.24
5224 10414 4.024302 GTCCACCCTTTGTCGAAAAAGTAG 60.024 45.833 23.31 17.24 35.73 2.57
5225 10415 3.252458 CCACCCTTTGTCGAAAAAGTAGG 59.748 47.826 23.31 20.08 35.73 3.18
5226 10416 4.131596 CACCCTTTGTCGAAAAAGTAGGA 58.868 43.478 23.31 0.00 35.73 2.94
5227 10417 4.213482 CACCCTTTGTCGAAAAAGTAGGAG 59.787 45.833 23.31 14.37 35.73 3.69
5228 10418 4.141551 ACCCTTTGTCGAAAAAGTAGGAGT 60.142 41.667 23.31 11.56 35.73 3.85
5229 10419 4.820173 CCCTTTGTCGAAAAAGTAGGAGTT 59.180 41.667 23.31 0.00 35.73 3.01
5230 10420 5.298527 CCCTTTGTCGAAAAAGTAGGAGTTT 59.701 40.000 23.31 0.00 35.73 2.66
5231 10421 6.199393 CCTTTGTCGAAAAAGTAGGAGTTTG 58.801 40.000 23.31 4.47 35.73 2.93
5279 10471 5.067283 ACAAGTGATTAGGTTGTGGTGTTTC 59.933 40.000 0.00 0.00 33.16 2.78
5283 10476 6.379988 AGTGATTAGGTTGTGGTGTTTCTTTT 59.620 34.615 0.00 0.00 0.00 2.27
5334 10527 2.070783 TGCCGTTCTTACATTCGTTCC 58.929 47.619 0.00 0.00 0.00 3.62
5351 10544 3.180980 CGTTCCGTGTGTGTACTTGTAAG 59.819 47.826 0.00 0.00 0.00 2.34
5353 10546 4.859304 TCCGTGTGTGTACTTGTAAGAT 57.141 40.909 0.00 0.00 0.00 2.40
5387 10580 4.104102 TGGCCGGAGAAAAATAGGATACAT 59.896 41.667 5.05 0.00 41.41 2.29
5556 10777 5.133221 ACTGTATTTCCAGATAACATGGCC 58.867 41.667 0.00 0.00 37.76 5.36
5558 10779 2.452600 TTTCCAGATAACATGGCCCC 57.547 50.000 0.00 0.00 37.76 5.80
5575 10796 1.930204 CCCCATAGGAAGTCCCCTTTT 59.070 52.381 0.00 0.00 38.24 2.27
5597 11405 1.789078 CGCTTGGCTGCAGACAGTTT 61.789 55.000 23.97 0.00 46.30 2.66
5600 11408 1.406539 CTTGGCTGCAGACAGTTTGTT 59.593 47.619 23.97 0.00 46.30 2.83
5601 11409 1.473258 TGGCTGCAGACAGTTTGTTT 58.527 45.000 21.20 0.00 46.30 2.83
5602 11410 1.134753 TGGCTGCAGACAGTTTGTTTG 59.865 47.619 21.20 0.00 46.30 2.93
5606 11414 4.420168 GCTGCAGACAGTTTGTTTGTTTA 58.580 39.130 20.43 0.00 46.30 2.01
5665 11473 2.288395 GCAGGACAAAAACACATCCCAG 60.288 50.000 0.00 0.00 30.99 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 6.790232 AGGTGTTCCATCTCAAAAGAAAAA 57.210 33.333 0.00 0.00 34.49 1.94
53 54 6.572519 CAAGGTGTTCCATCTCAAAAGAAAA 58.427 36.000 0.00 0.00 34.49 2.29
54 55 5.451798 GCAAGGTGTTCCATCTCAAAAGAAA 60.452 40.000 0.00 0.00 34.49 2.52
55 56 4.037923 GCAAGGTGTTCCATCTCAAAAGAA 59.962 41.667 0.00 0.00 34.49 2.52
56 57 3.569701 GCAAGGTGTTCCATCTCAAAAGA 59.430 43.478 0.00 0.00 35.89 2.52
57 58 3.318839 TGCAAGGTGTTCCATCTCAAAAG 59.681 43.478 0.00 0.00 35.89 2.27
58 59 3.295093 TGCAAGGTGTTCCATCTCAAAA 58.705 40.909 0.00 0.00 35.89 2.44
59 60 2.942804 TGCAAGGTGTTCCATCTCAAA 58.057 42.857 0.00 0.00 35.89 2.69
60 61 2.655090 TGCAAGGTGTTCCATCTCAA 57.345 45.000 0.00 0.00 35.89 3.02
61 62 2.885135 ATGCAAGGTGTTCCATCTCA 57.115 45.000 0.00 0.00 35.89 3.27
62 63 2.424956 GGAATGCAAGGTGTTCCATCTC 59.575 50.000 10.52 0.00 40.82 2.75
63 64 2.225091 TGGAATGCAAGGTGTTCCATCT 60.225 45.455 13.51 0.00 44.67 2.90
64 65 2.170166 TGGAATGCAAGGTGTTCCATC 58.830 47.619 13.51 0.00 44.67 3.51
65 66 2.307496 TGGAATGCAAGGTGTTCCAT 57.693 45.000 13.51 0.00 44.67 3.41
66 67 3.837893 TGGAATGCAAGGTGTTCCA 57.162 47.368 13.51 13.51 46.67 3.53
67 68 2.170166 TCATGGAATGCAAGGTGTTCC 58.830 47.619 8.78 8.78 46.21 3.62
68 69 4.460948 AATCATGGAATGCAAGGTGTTC 57.539 40.909 0.00 0.00 46.21 3.18
69 70 4.142403 CGTAATCATGGAATGCAAGGTGTT 60.142 41.667 0.00 0.00 46.21 3.32
70 71 3.378112 CGTAATCATGGAATGCAAGGTGT 59.622 43.478 0.00 0.00 46.21 4.16
71 72 3.243168 CCGTAATCATGGAATGCAAGGTG 60.243 47.826 0.00 0.00 46.21 4.00
72 73 2.951642 CCGTAATCATGGAATGCAAGGT 59.048 45.455 0.00 0.00 46.21 3.50
73 74 2.951642 ACCGTAATCATGGAATGCAAGG 59.048 45.455 0.00 0.00 46.21 3.61
74 75 3.243168 CCACCGTAATCATGGAATGCAAG 60.243 47.826 0.00 0.00 46.21 4.01
75 76 2.687425 CCACCGTAATCATGGAATGCAA 59.313 45.455 0.00 0.00 46.21 4.08
76 77 2.092699 TCCACCGTAATCATGGAATGCA 60.093 45.455 0.00 0.00 46.21 3.96
77 78 2.290641 GTCCACCGTAATCATGGAATGC 59.709 50.000 0.00 0.00 46.21 3.56
79 80 3.208747 GGTCCACCGTAATCATGGAAT 57.791 47.619 0.00 0.00 44.05 3.01
80 81 2.702592 GGTCCACCGTAATCATGGAA 57.297 50.000 0.00 0.00 44.05 3.53
94 95 3.948719 GCCACCTTGGTCGGTCCA 61.949 66.667 9.04 0.00 45.60 4.02
95 96 3.637273 AGCCACCTTGGTCGGTCC 61.637 66.667 9.04 0.00 40.46 4.46
96 97 2.358737 CAGCCACCTTGGTCGGTC 60.359 66.667 9.04 3.86 40.46 4.79
97 98 2.676163 GAACAGCCACCTTGGTCGGT 62.676 60.000 9.04 0.00 40.46 4.69
98 99 1.966451 GAACAGCCACCTTGGTCGG 60.966 63.158 0.00 0.00 40.46 4.79
99 100 0.817634 TTGAACAGCCACCTTGGTCG 60.818 55.000 0.00 0.00 40.46 4.79
100 101 0.954452 CTTGAACAGCCACCTTGGTC 59.046 55.000 0.00 0.00 40.46 4.02
101 102 0.258774 ACTTGAACAGCCACCTTGGT 59.741 50.000 0.00 0.00 40.46 3.67
102 103 0.670162 CACTTGAACAGCCACCTTGG 59.330 55.000 0.00 0.00 41.55 3.61
103 104 1.392589 ACACTTGAACAGCCACCTTG 58.607 50.000 0.00 0.00 0.00 3.61
104 105 1.750778 CAACACTTGAACAGCCACCTT 59.249 47.619 0.00 0.00 0.00 3.50
105 106 1.064758 TCAACACTTGAACAGCCACCT 60.065 47.619 0.00 0.00 36.59 4.00
106 107 1.388547 TCAACACTTGAACAGCCACC 58.611 50.000 0.00 0.00 36.59 4.61
107 108 3.815401 AGTATCAACACTTGAACAGCCAC 59.185 43.478 0.00 0.00 43.95 5.01
108 109 4.065088 GAGTATCAACACTTGAACAGCCA 58.935 43.478 0.00 0.00 43.95 4.75
109 110 4.065088 TGAGTATCAACACTTGAACAGCC 58.935 43.478 0.00 0.00 45.97 4.85
268 269 1.508088 GAAACGCAGCATTCAGGGG 59.492 57.895 0.00 0.00 0.00 4.79
302 303 1.081175 GCTTTGTCCCGAAGCAAGC 60.081 57.895 10.59 0.00 46.73 4.01
316 317 7.394816 AGTACATAATTGTGTAGGAGTGCTTT 58.605 34.615 14.58 0.00 35.40 3.51
325 326 6.508563 CGAGCAGCAAGTACATAATTGTGTAG 60.509 42.308 14.58 5.68 35.40 2.74
327 328 4.093408 CGAGCAGCAAGTACATAATTGTGT 59.907 41.667 12.73 12.73 36.53 3.72
336 337 1.667830 GCCACGAGCAGCAAGTACA 60.668 57.895 0.00 0.00 42.97 2.90
475 477 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
476 478 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
477 479 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
486 488 8.307483 AGAGATTTCAATATGGACTACATACGG 58.693 37.037 0.00 0.00 44.41 4.02
530 532 6.903534 TCAAACTTATCTACTCCCTCCATTCT 59.096 38.462 0.00 0.00 0.00 2.40
535 537 4.737055 GCGTCAAACTTATCTACTCCCTCC 60.737 50.000 0.00 0.00 0.00 4.30
549 551 1.000163 ACACAGATCGAGCGTCAAACT 60.000 47.619 0.00 0.00 0.00 2.66
576 578 6.074356 CGTCCAAGAAAAACAAAATCCACATC 60.074 38.462 0.00 0.00 0.00 3.06
588 590 4.124970 ACTAGTCACCGTCCAAGAAAAAC 58.875 43.478 0.00 0.00 0.00 2.43
632 657 8.269424 CACAGAACACGAGCATATTAATAACTC 58.731 37.037 14.56 14.56 0.00 3.01
647 681 3.194755 ACATATAGGCACACAGAACACGA 59.805 43.478 0.00 0.00 0.00 4.35
654 688 6.338214 AGACATAGACATATAGGCACACAG 57.662 41.667 0.00 0.00 0.00 3.66
718 752 3.432186 GCCACCATCATTGCTGACTACTA 60.432 47.826 0.00 0.00 33.22 1.82
836 879 2.972625 TCAATCACGGAACCAGATGAC 58.027 47.619 0.00 0.00 0.00 3.06
872 915 3.000080 GAAACTGCGTCCACGAGCG 62.000 63.158 2.58 0.00 43.02 5.03
886 930 6.937436 TTGGTCTACAAGGAGAAAAGAAAC 57.063 37.500 0.00 0.00 33.18 2.78
997 1075 0.106335 AGAGCCAGCGAATCCATCAG 59.894 55.000 0.00 0.00 0.00 2.90
1261 1345 4.803426 CGGCGCAGAGGAGGTGTC 62.803 72.222 10.83 0.00 0.00 3.67
1501 1591 3.389656 TGGCGTGTCCTATATTTGATCCA 59.610 43.478 0.00 0.00 35.26 3.41
1697 1792 1.168714 GACATTGGTCCCTGCTTCAC 58.831 55.000 0.00 0.00 38.12 3.18
1710 1808 7.930325 AGGTACATGATAAGATCACTGACATTG 59.070 37.037 0.00 0.00 43.01 2.82
1989 2093 2.224867 CCACTCCTCCATGTTTCTTGGT 60.225 50.000 0.00 0.00 35.64 3.67
2205 2309 4.777463 TCGTCACATCTCCATCACTACTA 58.223 43.478 0.00 0.00 0.00 1.82
2341 2455 0.324614 GGGGGCAAAGGTGGAAATTG 59.675 55.000 0.00 0.00 0.00 2.32
2462 2633 5.664294 TTCTCCTTTTACCTACGCATACA 57.336 39.130 0.00 0.00 0.00 2.29
2463 2634 6.335777 TCTTTCTCCTTTTACCTACGCATAC 58.664 40.000 0.00 0.00 0.00 2.39
2464 2635 6.534475 TCTTTCTCCTTTTACCTACGCATA 57.466 37.500 0.00 0.00 0.00 3.14
2702 3227 3.187637 GCTAAACCGCACACAGAAATACA 59.812 43.478 0.00 0.00 0.00 2.29
2758 5891 8.568676 TCCATCTTAGTTGCTAGTAGCTATAG 57.431 38.462 22.34 13.25 42.97 1.31
2759 5892 8.164733 ACTCCATCTTAGTTGCTAGTAGCTATA 58.835 37.037 22.34 9.95 42.97 1.31
2760 5893 7.007723 ACTCCATCTTAGTTGCTAGTAGCTAT 58.992 38.462 22.34 10.87 42.97 2.97
2974 8048 3.250040 ACCACTTGACATAGAAAACACGC 59.750 43.478 0.00 0.00 0.00 5.34
3041 8119 5.901413 ACCACCATGTCAAGATCATAGAT 57.099 39.130 0.00 0.00 0.00 1.98
3728 8852 5.543790 AGTTGCCTTAGGAAATCATGGTTTT 59.456 36.000 5.21 0.00 0.00 2.43
3937 9072 7.325694 CAAAATCTGCTATCTTGGGTTTCATT 58.674 34.615 0.00 0.00 0.00 2.57
4143 9300 2.820787 ACGTCAGACTTGGTAGAGAAGG 59.179 50.000 0.00 0.00 0.00 3.46
4639 9819 9.352784 CTCTATCTGAGAAAGACTAAAACTGTG 57.647 37.037 0.00 0.00 45.39 3.66
4707 9894 3.581755 TGAGCCACACAGTTAACGATAC 58.418 45.455 0.00 0.00 0.00 2.24
4810 10000 5.517054 GCCAGAAACGAAATACAAAACACAA 59.483 36.000 0.00 0.00 0.00 3.33
4880 10070 9.458374 GTGCATGTAACTTAGTATTGTTTGTTT 57.542 29.630 0.00 0.00 0.00 2.83
4921 10111 1.779569 ACAGTAACGCCTTCACGAAG 58.220 50.000 0.00 0.00 38.14 3.79
4922 10112 1.862201 CAACAGTAACGCCTTCACGAA 59.138 47.619 0.00 0.00 36.70 3.85
4923 10113 1.067364 TCAACAGTAACGCCTTCACGA 59.933 47.619 0.00 0.00 36.70 4.35
4924 10114 1.493772 TCAACAGTAACGCCTTCACG 58.506 50.000 0.00 0.00 39.50 4.35
4925 10115 2.870411 ACTTCAACAGTAACGCCTTCAC 59.130 45.455 0.00 0.00 31.97 3.18
4926 10116 3.188159 ACTTCAACAGTAACGCCTTCA 57.812 42.857 0.00 0.00 31.97 3.02
4927 10117 3.059120 GGAACTTCAACAGTAACGCCTTC 60.059 47.826 0.00 0.00 32.94 3.46
4928 10118 2.876550 GGAACTTCAACAGTAACGCCTT 59.123 45.455 0.00 0.00 32.94 4.35
4929 10119 2.104281 AGGAACTTCAACAGTAACGCCT 59.896 45.455 0.00 0.00 32.94 5.52
4930 10120 2.479275 GAGGAACTTCAACAGTAACGCC 59.521 50.000 0.00 0.00 41.55 5.68
4931 10121 2.155155 CGAGGAACTTCAACAGTAACGC 59.845 50.000 0.00 0.00 41.55 4.84
4932 10122 3.378339 ACGAGGAACTTCAACAGTAACG 58.622 45.455 0.00 0.00 41.55 3.18
4933 10123 4.365723 TGACGAGGAACTTCAACAGTAAC 58.634 43.478 0.00 0.00 41.55 2.50
4934 10124 4.659111 TGACGAGGAACTTCAACAGTAA 57.341 40.909 0.00 0.00 41.55 2.24
4935 10125 4.279922 TGATGACGAGGAACTTCAACAGTA 59.720 41.667 0.00 0.00 41.55 2.74
4936 10126 3.069586 TGATGACGAGGAACTTCAACAGT 59.930 43.478 0.00 0.00 41.55 3.55
4937 10127 3.653344 TGATGACGAGGAACTTCAACAG 58.347 45.455 0.00 0.00 41.55 3.16
4938 10128 3.744238 TGATGACGAGGAACTTCAACA 57.256 42.857 0.00 0.00 41.55 3.33
4939 10129 3.997021 ACATGATGACGAGGAACTTCAAC 59.003 43.478 0.00 0.00 41.55 3.18
4940 10130 3.996363 CACATGATGACGAGGAACTTCAA 59.004 43.478 0.00 0.00 41.55 2.69
4941 10131 3.588955 CACATGATGACGAGGAACTTCA 58.411 45.455 0.00 0.00 41.55 3.02
4942 10132 2.932614 CCACATGATGACGAGGAACTTC 59.067 50.000 0.00 0.00 41.55 3.01
4943 10133 2.303022 ACCACATGATGACGAGGAACTT 59.697 45.455 0.00 0.00 41.55 2.66
4945 10135 2.002586 CACCACATGATGACGAGGAAC 58.997 52.381 0.00 0.00 0.00 3.62
4946 10136 1.623311 ACACCACATGATGACGAGGAA 59.377 47.619 0.00 0.00 0.00 3.36
4947 10137 1.204704 GACACCACATGATGACGAGGA 59.795 52.381 0.00 0.00 0.00 3.71
4948 10138 1.066929 TGACACCACATGATGACGAGG 60.067 52.381 0.00 0.00 0.00 4.63
4949 10139 2.368655 TGACACCACATGATGACGAG 57.631 50.000 0.00 0.00 0.00 4.18
4950 10140 2.829741 TTGACACCACATGATGACGA 57.170 45.000 0.00 0.00 0.00 4.20
4951 10141 2.096335 CCATTGACACCACATGATGACG 59.904 50.000 0.00 0.00 0.00 4.35
4952 10142 3.084039 ACCATTGACACCACATGATGAC 58.916 45.455 0.00 0.00 0.00 3.06
4953 10143 3.438216 ACCATTGACACCACATGATGA 57.562 42.857 0.00 0.00 0.00 2.92
4954 10144 3.367600 CCAACCATTGACACCACATGATG 60.368 47.826 0.00 0.00 0.00 3.07
4955 10145 2.827322 CCAACCATTGACACCACATGAT 59.173 45.455 0.00 0.00 0.00 2.45
4956 10146 2.237643 CCAACCATTGACACCACATGA 58.762 47.619 0.00 0.00 0.00 3.07
4957 10147 1.962807 ACCAACCATTGACACCACATG 59.037 47.619 0.00 0.00 0.00 3.21
4958 10148 1.962807 CACCAACCATTGACACCACAT 59.037 47.619 0.00 0.00 0.00 3.21
4959 10149 1.397672 CACCAACCATTGACACCACA 58.602 50.000 0.00 0.00 0.00 4.17
4960 10150 0.031994 GCACCAACCATTGACACCAC 59.968 55.000 0.00 0.00 0.00 4.16
4961 10151 1.451337 CGCACCAACCATTGACACCA 61.451 55.000 0.00 0.00 0.00 4.17
4962 10152 1.169661 TCGCACCAACCATTGACACC 61.170 55.000 0.00 0.00 0.00 4.16
4963 10153 0.665835 TTCGCACCAACCATTGACAC 59.334 50.000 0.00 0.00 0.00 3.67
4964 10154 1.614996 ATTCGCACCAACCATTGACA 58.385 45.000 0.00 0.00 0.00 3.58
4965 10155 3.489059 CCATATTCGCACCAACCATTGAC 60.489 47.826 0.00 0.00 0.00 3.18
4966 10156 2.687425 CCATATTCGCACCAACCATTGA 59.313 45.455 0.00 0.00 0.00 2.57
4967 10157 2.426738 ACCATATTCGCACCAACCATTG 59.573 45.455 0.00 0.00 0.00 2.82
4968 10158 2.687935 GACCATATTCGCACCAACCATT 59.312 45.455 0.00 0.00 0.00 3.16
4969 10159 2.092429 AGACCATATTCGCACCAACCAT 60.092 45.455 0.00 0.00 0.00 3.55
4970 10160 1.280710 AGACCATATTCGCACCAACCA 59.719 47.619 0.00 0.00 0.00 3.67
4971 10161 1.940613 GAGACCATATTCGCACCAACC 59.059 52.381 0.00 0.00 0.00 3.77
4972 10162 2.609459 CTGAGACCATATTCGCACCAAC 59.391 50.000 0.00 0.00 0.00 3.77
4973 10163 2.236146 ACTGAGACCATATTCGCACCAA 59.764 45.455 0.00 0.00 0.00 3.67
4974 10164 1.831106 ACTGAGACCATATTCGCACCA 59.169 47.619 0.00 0.00 0.00 4.17
4975 10165 2.604046 ACTGAGACCATATTCGCACC 57.396 50.000 0.00 0.00 0.00 5.01
4976 10166 3.262420 ACAACTGAGACCATATTCGCAC 58.738 45.455 0.00 0.00 0.00 5.34
4977 10167 3.610040 ACAACTGAGACCATATTCGCA 57.390 42.857 0.00 0.00 0.00 5.10
4978 10168 4.683832 ACTACAACTGAGACCATATTCGC 58.316 43.478 0.00 0.00 0.00 4.70
4979 10169 6.590292 ACAAACTACAACTGAGACCATATTCG 59.410 38.462 0.00 0.00 0.00 3.34
4980 10170 7.201444 CGACAAACTACAACTGAGACCATATTC 60.201 40.741 0.00 0.00 0.00 1.75
4981 10171 6.590292 CGACAAACTACAACTGAGACCATATT 59.410 38.462 0.00 0.00 0.00 1.28
4982 10172 6.071560 TCGACAAACTACAACTGAGACCATAT 60.072 38.462 0.00 0.00 0.00 1.78
4983 10173 5.242171 TCGACAAACTACAACTGAGACCATA 59.758 40.000 0.00 0.00 0.00 2.74
4984 10174 4.038763 TCGACAAACTACAACTGAGACCAT 59.961 41.667 0.00 0.00 0.00 3.55
4985 10175 3.382227 TCGACAAACTACAACTGAGACCA 59.618 43.478 0.00 0.00 0.00 4.02
4986 10176 3.973657 TCGACAAACTACAACTGAGACC 58.026 45.455 0.00 0.00 0.00 3.85
4987 10177 5.117287 GTGATCGACAAACTACAACTGAGAC 59.883 44.000 0.00 0.00 0.00 3.36
4988 10178 5.009710 AGTGATCGACAAACTACAACTGAGA 59.990 40.000 0.00 0.00 0.00 3.27
4989 10179 5.117745 CAGTGATCGACAAACTACAACTGAG 59.882 44.000 0.00 0.00 0.00 3.35
4990 10180 4.982295 CAGTGATCGACAAACTACAACTGA 59.018 41.667 0.00 0.00 0.00 3.41
4991 10181 4.982295 TCAGTGATCGACAAACTACAACTG 59.018 41.667 0.00 0.00 0.00 3.16
4992 10182 5.196341 TCAGTGATCGACAAACTACAACT 57.804 39.130 0.00 0.00 0.00 3.16
4993 10183 5.633601 TGATCAGTGATCGACAAACTACAAC 59.366 40.000 24.52 0.90 41.51 3.32
4994 10184 5.778862 TGATCAGTGATCGACAAACTACAA 58.221 37.500 24.52 3.38 41.51 2.41
4995 10185 5.183140 TCTGATCAGTGATCGACAAACTACA 59.817 40.000 24.52 6.21 41.51 2.74
4996 10186 5.641709 TCTGATCAGTGATCGACAAACTAC 58.358 41.667 24.52 1.97 41.51 2.73
4997 10187 5.897377 TCTGATCAGTGATCGACAAACTA 57.103 39.130 24.52 6.93 41.51 2.24
4998 10188 4.790765 TCTGATCAGTGATCGACAAACT 57.209 40.909 24.52 0.00 41.51 2.66
4999 10189 5.633996 GATCTGATCAGTGATCGACAAAC 57.366 43.478 24.52 12.03 41.51 2.93
5037 10227 1.083489 CTATGTGCGGGCGAGAAAAA 58.917 50.000 0.00 0.00 0.00 1.94
5038 10228 1.366111 GCTATGTGCGGGCGAGAAAA 61.366 55.000 0.00 0.00 0.00 2.29
5039 10229 1.813753 GCTATGTGCGGGCGAGAAA 60.814 57.895 0.00 0.00 0.00 2.52
5040 10230 2.202878 GCTATGTGCGGGCGAGAA 60.203 61.111 0.00 0.00 0.00 2.87
5047 10237 8.580657 GTCATAAGACCAAAAGCTATGTGCGG 62.581 46.154 0.00 0.00 41.95 5.69
5048 10238 5.727791 GTCATAAGACCAAAAGCTATGTGCG 60.728 44.000 0.00 0.00 41.95 5.34
5049 10239 5.355350 AGTCATAAGACCAAAAGCTATGTGC 59.645 40.000 0.00 0.00 46.15 4.57
5050 10240 6.992063 AGTCATAAGACCAAAAGCTATGTG 57.008 37.500 0.00 0.00 46.15 3.21
5051 10241 7.575720 GCAAAGTCATAAGACCAAAAGCTATGT 60.576 37.037 0.00 0.00 46.15 2.29
5052 10242 6.749118 GCAAAGTCATAAGACCAAAAGCTATG 59.251 38.462 0.00 0.00 46.15 2.23
5053 10243 6.660949 AGCAAAGTCATAAGACCAAAAGCTAT 59.339 34.615 0.00 0.00 46.15 2.97
5054 10244 6.003950 AGCAAAGTCATAAGACCAAAAGCTA 58.996 36.000 0.00 0.00 46.15 3.32
5055 10245 4.829492 AGCAAAGTCATAAGACCAAAAGCT 59.171 37.500 0.00 0.00 46.15 3.74
5056 10246 5.126396 AGCAAAGTCATAAGACCAAAAGC 57.874 39.130 0.00 0.00 46.15 3.51
5057 10247 7.440523 ACTAGCAAAGTCATAAGACCAAAAG 57.559 36.000 0.00 0.00 46.15 2.27
5058 10248 7.648142 CAACTAGCAAAGTCATAAGACCAAAA 58.352 34.615 0.00 0.00 46.15 2.44
5059 10249 6.293955 GCAACTAGCAAAGTCATAAGACCAAA 60.294 38.462 0.00 0.00 43.98 3.28
5060 10250 5.181245 GCAACTAGCAAAGTCATAAGACCAA 59.819 40.000 0.00 0.00 43.98 3.67
5061 10251 4.695455 GCAACTAGCAAAGTCATAAGACCA 59.305 41.667 0.00 0.00 43.98 4.02
5062 10252 4.201724 CGCAACTAGCAAAGTCATAAGACC 60.202 45.833 0.00 0.00 44.47 3.85
5063 10253 4.201724 CCGCAACTAGCAAAGTCATAAGAC 60.202 45.833 0.00 0.00 46.13 3.01
5064 10254 3.932710 CCGCAACTAGCAAAGTCATAAGA 59.067 43.478 0.00 0.00 46.13 2.10
5065 10255 3.063997 CCCGCAACTAGCAAAGTCATAAG 59.936 47.826 0.00 0.00 46.13 1.73
5066 10256 3.006940 CCCGCAACTAGCAAAGTCATAA 58.993 45.455 0.00 0.00 46.13 1.90
5067 10257 2.027561 ACCCGCAACTAGCAAAGTCATA 60.028 45.455 0.00 0.00 46.13 2.15
5068 10258 1.271379 ACCCGCAACTAGCAAAGTCAT 60.271 47.619 0.00 0.00 46.13 3.06
5069 10259 0.107831 ACCCGCAACTAGCAAAGTCA 59.892 50.000 0.00 0.00 46.13 3.41
5070 10260 2.088950 TACCCGCAACTAGCAAAGTC 57.911 50.000 0.00 0.00 46.13 3.01
5071 10261 2.290071 ACATACCCGCAACTAGCAAAGT 60.290 45.455 0.00 0.00 46.13 2.66
5072 10262 2.356135 ACATACCCGCAACTAGCAAAG 58.644 47.619 0.00 0.00 46.13 2.77
5073 10263 2.483014 ACATACCCGCAACTAGCAAA 57.517 45.000 0.00 0.00 46.13 3.68
5074 10264 2.483014 AACATACCCGCAACTAGCAA 57.517 45.000 0.00 0.00 46.13 3.91
5075 10265 2.352388 GAAACATACCCGCAACTAGCA 58.648 47.619 0.00 0.00 46.13 3.49
5076 10266 1.669265 GGAAACATACCCGCAACTAGC 59.331 52.381 0.00 0.00 40.87 3.42
5077 10267 2.676342 GTGGAAACATACCCGCAACTAG 59.324 50.000 0.00 0.00 46.14 2.57
5078 10268 2.702261 GTGGAAACATACCCGCAACTA 58.298 47.619 0.00 0.00 46.14 2.24
5079 10269 1.530323 GTGGAAACATACCCGCAACT 58.470 50.000 0.00 0.00 46.14 3.16
5080 10270 0.167251 CGTGGAAACATACCCGCAAC 59.833 55.000 0.00 0.00 46.14 4.17
5081 10271 0.250381 ACGTGGAAACATACCCGCAA 60.250 50.000 0.00 0.00 46.14 4.85
5082 10272 0.951525 CACGTGGAAACATACCCGCA 60.952 55.000 7.95 0.00 46.14 5.69
5083 10273 0.671163 TCACGTGGAAACATACCCGC 60.671 55.000 17.00 0.00 46.14 6.13
5084 10274 1.337447 ACTCACGTGGAAACATACCCG 60.337 52.381 17.00 0.00 46.14 5.28
5085 10275 2.073816 CACTCACGTGGAAACATACCC 58.926 52.381 17.00 0.00 46.14 3.69
5086 10276 2.478894 CACACTCACGTGGAAACATACC 59.521 50.000 17.00 0.00 45.50 2.73
5087 10277 3.128349 ACACACTCACGTGGAAACATAC 58.872 45.455 17.00 0.00 45.50 2.39
5088 10278 3.462483 ACACACTCACGTGGAAACATA 57.538 42.857 17.00 0.00 45.50 2.29
5089 10279 2.325583 ACACACTCACGTGGAAACAT 57.674 45.000 17.00 0.00 45.50 2.71
5090 10280 1.735018 CAACACACTCACGTGGAAACA 59.265 47.619 17.00 0.00 45.50 2.83
5091 10281 1.063469 CCAACACACTCACGTGGAAAC 59.937 52.381 17.00 0.00 45.50 2.78
5092 10282 1.374560 CCAACACACTCACGTGGAAA 58.625 50.000 17.00 0.00 45.50 3.13
5093 10283 0.462937 CCCAACACACTCACGTGGAA 60.463 55.000 17.00 0.00 45.50 3.53
5094 10284 1.145156 CCCAACACACTCACGTGGA 59.855 57.895 17.00 1.41 45.50 4.02
5095 10285 0.746563 AACCCAACACACTCACGTGG 60.747 55.000 17.00 9.11 45.50 4.94
5096 10286 0.376852 CAACCCAACACACTCACGTG 59.623 55.000 9.94 9.94 46.63 4.49
5097 10287 0.746563 CCAACCCAACACACTCACGT 60.747 55.000 0.00 0.00 0.00 4.49
5098 10288 2.021722 CCAACCCAACACACTCACG 58.978 57.895 0.00 0.00 0.00 4.35
5099 10289 0.751643 AGCCAACCCAACACACTCAC 60.752 55.000 0.00 0.00 0.00 3.51
5100 10290 0.751277 CAGCCAACCCAACACACTCA 60.751 55.000 0.00 0.00 0.00 3.41
5101 10291 0.751643 ACAGCCAACCCAACACACTC 60.752 55.000 0.00 0.00 0.00 3.51
5102 10292 1.037030 CACAGCCAACCCAACACACT 61.037 55.000 0.00 0.00 0.00 3.55
5103 10293 1.319614 ACACAGCCAACCCAACACAC 61.320 55.000 0.00 0.00 0.00 3.82
5104 10294 1.000270 ACACAGCCAACCCAACACA 60.000 52.632 0.00 0.00 0.00 3.72
5105 10295 1.437160 CACACAGCCAACCCAACAC 59.563 57.895 0.00 0.00 0.00 3.32
5106 10296 2.422231 GCACACAGCCAACCCAACA 61.422 57.895 0.00 0.00 37.23 3.33
5107 10297 1.747325 ATGCACACAGCCAACCCAAC 61.747 55.000 0.00 0.00 44.83 3.77
5108 10298 1.457267 ATGCACACAGCCAACCCAA 60.457 52.632 0.00 0.00 44.83 4.12
5109 10299 1.902918 GATGCACACAGCCAACCCA 60.903 57.895 0.00 0.00 44.83 4.51
5110 10300 2.964978 GATGCACACAGCCAACCC 59.035 61.111 0.00 0.00 44.83 4.11
5124 10314 2.611473 CGGCCTCTGCATAACTAGGATG 60.611 54.545 0.00 0.00 40.13 3.51
5125 10315 1.620819 CGGCCTCTGCATAACTAGGAT 59.379 52.381 0.00 0.00 40.13 3.24
5126 10316 1.040646 CGGCCTCTGCATAACTAGGA 58.959 55.000 0.00 0.00 40.13 2.94
5127 10317 0.034059 CCGGCCTCTGCATAACTAGG 59.966 60.000 0.00 0.00 40.13 3.02
5128 10318 0.034059 CCCGGCCTCTGCATAACTAG 59.966 60.000 0.00 0.00 40.13 2.57
5129 10319 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
5130 10320 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
5131 10321 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
5132 10322 2.297895 ACACCCGGCCTCTGCATAA 61.298 57.895 0.00 0.00 40.13 1.90
5133 10323 2.687200 ACACCCGGCCTCTGCATA 60.687 61.111 0.00 0.00 40.13 3.14
5134 10324 4.415150 CACACCCGGCCTCTGCAT 62.415 66.667 0.00 0.00 40.13 3.96
5141 10331 4.722700 ATGAGCACACACCCGGCC 62.723 66.667 0.00 0.00 0.00 6.13
5142 10332 2.672996 AATGAGCACACACCCGGC 60.673 61.111 0.00 0.00 0.00 6.13
5143 10333 0.321210 TACAATGAGCACACACCCGG 60.321 55.000 0.00 0.00 0.00 5.73
5144 10334 1.737838 ATACAATGAGCACACACCCG 58.262 50.000 0.00 0.00 0.00 5.28
5145 10335 4.640201 ACATAATACAATGAGCACACACCC 59.360 41.667 0.00 0.00 0.00 4.61
5146 10336 5.818136 ACATAATACAATGAGCACACACC 57.182 39.130 0.00 0.00 0.00 4.16
5147 10337 7.442364 AGGATACATAATACAATGAGCACACAC 59.558 37.037 0.00 0.00 41.41 3.82
5148 10338 7.508687 AGGATACATAATACAATGAGCACACA 58.491 34.615 0.00 0.00 41.41 3.72
5149 10339 7.875041 AGAGGATACATAATACAATGAGCACAC 59.125 37.037 0.00 0.00 41.41 3.82
5150 10340 7.966812 AGAGGATACATAATACAATGAGCACA 58.033 34.615 0.00 0.00 41.41 4.57
5151 10341 8.715998 CAAGAGGATACATAATACAATGAGCAC 58.284 37.037 0.00 0.00 41.41 4.40
5152 10342 8.650490 TCAAGAGGATACATAATACAATGAGCA 58.350 33.333 0.00 0.00 41.41 4.26
5153 10343 9.664332 ATCAAGAGGATACATAATACAATGAGC 57.336 33.333 0.00 0.00 41.41 4.26
5155 10345 9.440773 GCATCAAGAGGATACATAATACAATGA 57.559 33.333 0.00 0.00 41.41 2.57
5156 10346 9.445878 AGCATCAAGAGGATACATAATACAATG 57.554 33.333 0.00 0.00 41.41 2.82
5157 10347 9.664332 GAGCATCAAGAGGATACATAATACAAT 57.336 33.333 0.00 0.00 33.95 2.71
5158 10348 8.097038 GGAGCATCAAGAGGATACATAATACAA 58.903 37.037 0.00 0.00 36.25 2.41
5159 10349 7.235399 TGGAGCATCAAGAGGATACATAATACA 59.765 37.037 0.00 0.00 36.25 2.29
5160 10350 7.615403 TGGAGCATCAAGAGGATACATAATAC 58.385 38.462 0.00 0.00 36.25 1.89
5161 10351 7.797121 TGGAGCATCAAGAGGATACATAATA 57.203 36.000 0.00 0.00 36.25 0.98
5162 10352 6.692849 TGGAGCATCAAGAGGATACATAAT 57.307 37.500 0.00 0.00 36.25 1.28
5163 10353 6.692849 ATGGAGCATCAAGAGGATACATAA 57.307 37.500 0.00 0.00 36.25 1.90
5164 10354 6.692849 AATGGAGCATCAAGAGGATACATA 57.307 37.500 0.00 0.00 36.25 2.29
5165 10355 5.579753 AATGGAGCATCAAGAGGATACAT 57.420 39.130 0.00 0.00 36.25 2.29
5166 10356 5.378230 AAATGGAGCATCAAGAGGATACA 57.622 39.130 0.00 0.00 36.25 2.29
5167 10357 7.521261 GCTTAAAATGGAGCATCAAGAGGATAC 60.521 40.741 0.00 0.00 38.73 2.24
5168 10358 6.488006 GCTTAAAATGGAGCATCAAGAGGATA 59.512 38.462 0.00 0.00 38.73 2.59
5169 10359 5.301298 GCTTAAAATGGAGCATCAAGAGGAT 59.699 40.000 0.00 0.00 38.73 3.24
5170 10360 4.641989 GCTTAAAATGGAGCATCAAGAGGA 59.358 41.667 0.00 0.00 38.73 3.71
5171 10361 4.202090 GGCTTAAAATGGAGCATCAAGAGG 60.202 45.833 0.00 0.00 40.63 3.69
5172 10362 4.400251 TGGCTTAAAATGGAGCATCAAGAG 59.600 41.667 0.00 0.00 40.63 2.85
5173 10363 4.343231 TGGCTTAAAATGGAGCATCAAGA 58.657 39.130 0.00 0.00 40.63 3.02
5174 10364 4.724074 TGGCTTAAAATGGAGCATCAAG 57.276 40.909 0.00 0.00 40.63 3.02
5175 10365 5.680594 ATTGGCTTAAAATGGAGCATCAA 57.319 34.783 0.00 0.00 40.63 2.57
5176 10366 6.788598 TTATTGGCTTAAAATGGAGCATCA 57.211 33.333 0.00 0.00 40.63 3.07
5177 10367 7.267857 ACTTTATTGGCTTAAAATGGAGCATC 58.732 34.615 0.00 0.00 40.63 3.91
5178 10368 7.186570 ACTTTATTGGCTTAAAATGGAGCAT 57.813 32.000 0.00 0.00 40.63 3.79
5179 10369 6.350949 GGACTTTATTGGCTTAAAATGGAGCA 60.351 38.462 0.00 0.00 40.63 4.26
5180 10370 6.042777 GGACTTTATTGGCTTAAAATGGAGC 58.957 40.000 0.00 0.00 38.17 4.70
5181 10371 7.035612 GTGGACTTTATTGGCTTAAAATGGAG 58.964 38.462 0.00 0.00 0.00 3.86
5182 10372 6.071051 GGTGGACTTTATTGGCTTAAAATGGA 60.071 38.462 0.00 0.00 0.00 3.41
5183 10373 6.106003 GGTGGACTTTATTGGCTTAAAATGG 58.894 40.000 0.00 0.00 0.00 3.16
5184 10374 6.070824 AGGGTGGACTTTATTGGCTTAAAATG 60.071 38.462 0.00 0.00 0.00 2.32
5185 10375 6.022958 AGGGTGGACTTTATTGGCTTAAAAT 58.977 36.000 0.00 0.00 0.00 1.82
5186 10376 5.399113 AGGGTGGACTTTATTGGCTTAAAA 58.601 37.500 0.00 0.00 0.00 1.52
5187 10377 5.005628 AGGGTGGACTTTATTGGCTTAAA 57.994 39.130 0.00 0.00 0.00 1.52
5188 10378 4.668138 AGGGTGGACTTTATTGGCTTAA 57.332 40.909 0.00 0.00 0.00 1.85
5189 10379 4.668138 AAGGGTGGACTTTATTGGCTTA 57.332 40.909 0.00 0.00 0.00 3.09
5190 10380 3.542969 AAGGGTGGACTTTATTGGCTT 57.457 42.857 0.00 0.00 0.00 4.35
5191 10381 3.165071 CAAAGGGTGGACTTTATTGGCT 58.835 45.455 0.00 0.00 38.56 4.75
5192 10382 2.897326 ACAAAGGGTGGACTTTATTGGC 59.103 45.455 0.00 0.00 38.56 4.52
5193 10383 3.190535 CGACAAAGGGTGGACTTTATTGG 59.809 47.826 0.00 0.00 38.56 3.16
5194 10384 4.069304 TCGACAAAGGGTGGACTTTATTG 58.931 43.478 0.00 0.00 38.56 1.90
5195 10385 4.360951 TCGACAAAGGGTGGACTTTATT 57.639 40.909 0.00 0.00 38.56 1.40
5196 10386 4.360951 TTCGACAAAGGGTGGACTTTAT 57.639 40.909 0.00 0.00 38.56 1.40
5197 10387 3.842007 TTCGACAAAGGGTGGACTTTA 57.158 42.857 0.00 0.00 38.56 1.85
5198 10388 2.721425 TTCGACAAAGGGTGGACTTT 57.279 45.000 0.00 0.00 41.12 2.66
5199 10389 2.721425 TTTCGACAAAGGGTGGACTT 57.279 45.000 0.00 0.00 33.65 3.01
5200 10390 2.721425 TTTTCGACAAAGGGTGGACT 57.279 45.000 0.00 0.00 33.65 3.85
5201 10391 2.686405 ACTTTTTCGACAAAGGGTGGAC 59.314 45.455 23.86 0.00 37.98 4.02
5202 10392 3.007473 ACTTTTTCGACAAAGGGTGGA 57.993 42.857 23.86 0.00 37.98 4.02
5203 10393 3.252458 CCTACTTTTTCGACAAAGGGTGG 59.748 47.826 23.86 18.23 37.98 4.61
5204 10394 4.131596 TCCTACTTTTTCGACAAAGGGTG 58.868 43.478 23.86 14.40 37.98 4.61
5205 10395 4.141551 ACTCCTACTTTTTCGACAAAGGGT 60.142 41.667 23.86 10.58 37.98 4.34
5206 10396 4.386711 ACTCCTACTTTTTCGACAAAGGG 58.613 43.478 23.86 17.24 37.98 3.95
5207 10397 6.037830 TCAAACTCCTACTTTTTCGACAAAGG 59.962 38.462 23.86 10.76 37.98 3.11
5208 10398 7.011828 TCAAACTCCTACTTTTTCGACAAAG 57.988 36.000 19.82 19.82 39.35 2.77
5209 10399 6.988622 TCAAACTCCTACTTTTTCGACAAA 57.011 33.333 0.00 0.00 0.00 2.83
5210 10400 6.988622 TTCAAACTCCTACTTTTTCGACAA 57.011 33.333 0.00 0.00 0.00 3.18
5211 10401 6.988622 TTTCAAACTCCTACTTTTTCGACA 57.011 33.333 0.00 0.00 0.00 4.35
5212 10402 7.862648 AGATTTCAAACTCCTACTTTTTCGAC 58.137 34.615 0.00 0.00 0.00 4.20
5213 10403 8.985805 GTAGATTTCAAACTCCTACTTTTTCGA 58.014 33.333 0.00 0.00 0.00 3.71
5214 10404 7.950496 CGTAGATTTCAAACTCCTACTTTTTCG 59.050 37.037 0.00 0.00 0.00 3.46
5215 10405 8.985805 TCGTAGATTTCAAACTCCTACTTTTTC 58.014 33.333 0.00 0.00 0.00 2.29
5216 10406 8.897872 TCGTAGATTTCAAACTCCTACTTTTT 57.102 30.769 0.00 0.00 0.00 1.94
5217 10407 8.897872 TTCGTAGATTTCAAACTCCTACTTTT 57.102 30.769 0.00 0.00 35.04 2.27
5218 10408 7.603024 CCTTCGTAGATTTCAAACTCCTACTTT 59.397 37.037 0.00 0.00 35.04 2.66
5219 10409 7.097834 CCTTCGTAGATTTCAAACTCCTACTT 58.902 38.462 0.00 0.00 35.04 2.24
5220 10410 6.210984 ACCTTCGTAGATTTCAAACTCCTACT 59.789 38.462 0.00 0.00 35.04 2.57
5221 10411 6.310711 CACCTTCGTAGATTTCAAACTCCTAC 59.689 42.308 0.00 0.00 35.04 3.18
5222 10412 6.209986 TCACCTTCGTAGATTTCAAACTCCTA 59.790 38.462 0.00 0.00 35.04 2.94
5223 10413 5.011738 TCACCTTCGTAGATTTCAAACTCCT 59.988 40.000 0.00 0.00 35.04 3.69
5224 10414 5.120363 GTCACCTTCGTAGATTTCAAACTCC 59.880 44.000 0.00 0.00 35.04 3.85
5225 10415 5.120363 GGTCACCTTCGTAGATTTCAAACTC 59.880 44.000 0.00 0.00 35.04 3.01
5226 10416 4.995487 GGTCACCTTCGTAGATTTCAAACT 59.005 41.667 0.00 0.00 35.04 2.66
5227 10417 4.995487 AGGTCACCTTCGTAGATTTCAAAC 59.005 41.667 0.00 0.00 35.04 2.93
5228 10418 4.994852 CAGGTCACCTTCGTAGATTTCAAA 59.005 41.667 0.00 0.00 35.04 2.69
5229 10419 4.562757 CCAGGTCACCTTCGTAGATTTCAA 60.563 45.833 0.00 0.00 35.04 2.69
5230 10420 3.056107 CCAGGTCACCTTCGTAGATTTCA 60.056 47.826 0.00 0.00 35.04 2.69
5231 10421 3.522553 CCAGGTCACCTTCGTAGATTTC 58.477 50.000 0.00 0.00 35.04 2.17
5283 10476 7.612633 AGACCAACACAAAACCTAAAGTTCTTA 59.387 33.333 0.00 0.00 37.88 2.10
5334 10527 6.455113 GCCATTATCTTACAAGTACACACACG 60.455 42.308 0.00 0.00 0.00 4.49
5575 10796 4.704833 GTCTGCAGCCAAGCGGGA 62.705 66.667 9.47 0.00 41.26 5.14
5633 11441 3.857854 GTCCTGCTGCGATGCACG 61.858 66.667 0.00 0.00 45.66 5.34
5638 11446 1.001378 GTGTTTTTGTCCTGCTGCGAT 60.001 47.619 0.00 0.00 0.00 4.58
5639 11447 0.380378 GTGTTTTTGTCCTGCTGCGA 59.620 50.000 0.00 0.00 0.00 5.10
5646 11454 3.312736 ACTGGGATGTGTTTTTGTCCT 57.687 42.857 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.