Multiple sequence alignment - TraesCS5D01G358000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G358000 chr5D 100.000 5939 0 0 1 5939 438442275 438436337 0.000000e+00 10968.0
1 TraesCS5D01G358000 chr5D 75.589 1315 282 31 1033 2332 438576642 438575352 1.090000e-171 614.0
2 TraesCS5D01G358000 chr5D 81.470 313 51 5 34 344 438454058 438453751 3.550000e-62 250.0
3 TraesCS5D01G358000 chr5D 88.205 195 20 3 662 854 438458221 438458028 4.630000e-56 230.0
4 TraesCS5D01G358000 chr5A 92.729 2668 150 20 214 2858 553499828 553497182 0.000000e+00 3812.0
5 TraesCS5D01G358000 chr5A 95.264 1098 47 5 3949 5044 553491200 553490106 0.000000e+00 1735.0
6 TraesCS5D01G358000 chr5A 81.289 1117 185 19 3449 4557 553480314 553479214 0.000000e+00 883.0
7 TraesCS5D01G358000 chr5A 92.614 528 33 3 3429 3951 553491925 553491399 0.000000e+00 754.0
8 TraesCS5D01G358000 chr5A 90.685 365 32 2 5104 5466 553489991 553489627 8.950000e-133 484.0
9 TraesCS5D01G358000 chr5A 92.364 275 12 2 5665 5939 553488337 553488072 3.360000e-102 383.0
10 TraesCS5D01G358000 chr5A 85.366 328 40 3 2913 3232 553497177 553496850 3.430000e-87 333.0
11 TraesCS5D01G358000 chr5A 80.805 323 55 5 34 354 553537854 553537537 4.600000e-61 246.0
12 TraesCS5D01G358000 chr5A 76.586 457 70 25 662 1112 554064344 554063919 3.600000e-52 217.0
13 TraesCS5D01G358000 chr5A 87.065 201 13 7 3235 3423 553496500 553496301 1.300000e-51 215.0
14 TraesCS5D01G358000 chr5A 86.441 177 18 5 680 850 553565927 553565751 7.860000e-44 189.0
15 TraesCS5D01G358000 chr5A 86.260 131 14 4 728 854 554148606 554148476 8.030000e-29 139.0
16 TraesCS5D01G358000 chr5B 91.404 1966 114 17 692 2645 533038506 533036584 0.000000e+00 2643.0
17 TraesCS5D01G358000 chr5B 93.890 1702 87 7 3429 5113 533035477 533033776 0.000000e+00 2551.0
18 TraesCS5D01G358000 chr5B 79.520 1499 271 28 3463 4941 532550008 532551490 0.000000e+00 1035.0
19 TraesCS5D01G358000 chr5B 78.448 1508 276 43 3451 4941 533509282 533507807 0.000000e+00 939.0
20 TraesCS5D01G358000 chr5B 82.063 1115 174 21 3448 4550 533018825 533017725 0.000000e+00 928.0
21 TraesCS5D01G358000 chr5B 79.313 1107 192 31 3451 4541 533383811 533382726 0.000000e+00 741.0
22 TraesCS5D01G358000 chr5B 89.062 512 27 13 5104 5606 533033721 533033230 5.090000e-170 608.0
23 TraesCS5D01G358000 chr5B 86.268 568 62 6 2862 3422 533036586 533036028 2.370000e-168 603.0
24 TraesCS5D01G358000 chr5B 74.941 1269 283 27 1080 2332 533481220 533479971 3.130000e-152 549.0
25 TraesCS5D01G358000 chr5B 88.859 368 24 8 203 556 533038938 533038574 2.540000e-118 436.0
26 TraesCS5D01G358000 chr5B 81.529 314 54 4 34 345 533034268 533033957 7.640000e-64 255.0
27 TraesCS5D01G358000 chr5B 80.635 315 55 5 32 345 533088014 533087705 7.690000e-59 239.0
28 TraesCS5D01G358000 chr5B 89.674 184 11 5 5664 5847 533033217 533033042 1.670000e-55 228.0
29 TraesCS5D01G358000 chr5B 92.727 110 7 1 682 790 533032945 533032836 2.220000e-34 158.0
30 TraesCS5D01G358000 chr5B 96.078 51 1 1 563 613 279098300 279098349 1.370000e-11 82.4
31 TraesCS5D01G358000 chr2B 80.690 1652 261 44 3450 5078 20146453 20148069 0.000000e+00 1230.0
32 TraesCS5D01G358000 chr2B 78.166 1516 274 48 3452 4941 65047450 65048934 0.000000e+00 913.0
33 TraesCS5D01G358000 chr2B 75.809 1360 286 28 997 2327 65045469 65046814 0.000000e+00 649.0
34 TraesCS5D01G358000 chr2B 88.525 61 5 2 567 626 37004000 37004059 8.260000e-09 73.1
35 TraesCS5D01G358000 chr2A 81.614 1512 239 29 3450 4941 14711965 14710473 0.000000e+00 1216.0
36 TraesCS5D01G358000 chr2A 80.218 1653 270 43 3450 5078 14730560 14728941 0.000000e+00 1188.0
37 TraesCS5D01G358000 chr2A 80.559 1538 265 23 3450 4967 14721231 14719708 0.000000e+00 1153.0
38 TraesCS5D01G358000 chr2A 81.653 1428 221 27 3531 4941 14740604 14739201 0.000000e+00 1147.0
39 TraesCS5D01G358000 chr2A 79.723 1662 261 53 3450 5078 14703706 14702088 0.000000e+00 1133.0
40 TraesCS5D01G358000 chr2A 77.672 1263 261 17 1080 2327 14714295 14713039 0.000000e+00 750.0
41 TraesCS5D01G358000 chr2A 81.818 308 53 3 34 340 14682439 14682134 7.640000e-64 255.0
42 TraesCS5D01G358000 chr2A 88.636 44 5 0 3369 3412 440081728 440081771 3.000000e-03 54.7
43 TraesCS5D01G358000 chr2D 81.104 1503 254 19 3457 4941 12632550 12631060 0.000000e+00 1175.0
44 TraesCS5D01G358000 chr2D 81.102 1180 188 26 3450 4615 12626755 12625597 0.000000e+00 911.0
45 TraesCS5D01G358000 chr2D 84.270 356 47 7 33 383 37297278 37297629 7.370000e-89 339.0
46 TraesCS5D01G358000 chr2D 82.143 308 52 3 34 340 12631373 12631068 1.640000e-65 261.0
47 TraesCS5D01G358000 chr2D 81.169 308 55 3 34 340 12625521 12625216 1.650000e-60 244.0
48 TraesCS5D01G358000 chr2D 93.939 66 3 1 5609 5673 179127649 179127584 1.360000e-16 99.0
49 TraesCS5D01G358000 chr2D 93.750 64 3 1 5609 5671 155510449 155510512 1.760000e-15 95.3
50 TraesCS5D01G358000 chr2D 87.342 79 6 4 5609 5684 268205381 268205304 2.950000e-13 87.9
51 TraesCS5D01G358000 chrUn 73.636 1320 298 35 1043 2340 63296294 63295003 1.170000e-126 464.0
52 TraesCS5D01G358000 chrUn 73.676 1322 295 34 1043 2340 319150501 319149209 1.170000e-126 464.0
53 TraesCS5D01G358000 chrUn 85.876 177 19 5 680 850 63337785 63337609 3.660000e-42 183.0
54 TraesCS5D01G358000 chr3B 83.846 260 40 2 26 284 9568823 9568565 4.600000e-61 246.0
55 TraesCS5D01G358000 chr3B 92.727 55 2 2 568 621 46101826 46101879 1.770000e-10 78.7
56 TraesCS5D01G358000 chr1A 95.238 63 1 2 5609 5669 543651782 543651844 1.360000e-16 99.0
57 TraesCS5D01G358000 chr7B 92.537 67 3 2 5613 5677 275202836 275202902 1.760000e-15 95.3
58 TraesCS5D01G358000 chr7B 97.872 47 0 1 567 613 446152402 446152447 4.930000e-11 80.5
59 TraesCS5D01G358000 chr6D 88.608 79 5 4 5609 5684 193466589 193466666 6.340000e-15 93.5
60 TraesCS5D01G358000 chr6D 87.342 79 6 4 5609 5684 309794079 309794156 2.950000e-13 87.9
61 TraesCS5D01G358000 chr7D 88.462 78 5 4 5609 5683 325333873 325333949 2.280000e-14 91.6
62 TraesCS5D01G358000 chr7D 97.872 47 0 1 567 613 428723298 428723343 4.930000e-11 80.5
63 TraesCS5D01G358000 chr1B 90.278 72 4 3 5609 5678 348397254 348397184 2.280000e-14 91.6
64 TraesCS5D01G358000 chr4A 97.917 48 0 1 566 613 490601921 490601967 1.370000e-11 82.4
65 TraesCS5D01G358000 chr3D 92.727 55 2 2 567 620 504731691 504731744 1.770000e-10 78.7
66 TraesCS5D01G358000 chr3D 95.833 48 1 1 567 614 360634056 360634102 6.380000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G358000 chr5D 438436337 438442275 5938 True 10968.000000 10968 100.000000 1 5939 1 chr5D.!!$R1 5938
1 TraesCS5D01G358000 chr5D 438575352 438576642 1290 True 614.000000 614 75.589000 1033 2332 1 chr5D.!!$R2 1299
2 TraesCS5D01G358000 chr5D 438453751 438458221 4470 True 240.000000 250 84.837500 34 854 2 chr5D.!!$R3 820
3 TraesCS5D01G358000 chr5A 553496301 553499828 3527 True 1453.333333 3812 88.386667 214 3423 3 chr5A.!!$R7 3209
4 TraesCS5D01G358000 chr5A 553479214 553480314 1100 True 883.000000 883 81.289000 3449 4557 1 chr5A.!!$R1 1108
5 TraesCS5D01G358000 chr5A 553488072 553491925 3853 True 839.000000 1735 92.731750 3429 5939 4 chr5A.!!$R6 2510
6 TraesCS5D01G358000 chr5B 532550008 532551490 1482 False 1035.000000 1035 79.520000 3463 4941 1 chr5B.!!$F2 1478
7 TraesCS5D01G358000 chr5B 533507807 533509282 1475 True 939.000000 939 78.448000 3451 4941 1 chr5B.!!$R5 1490
8 TraesCS5D01G358000 chr5B 533032836 533038938 6102 True 935.250000 2643 89.176625 34 5847 8 chr5B.!!$R6 5813
9 TraesCS5D01G358000 chr5B 533017725 533018825 1100 True 928.000000 928 82.063000 3448 4550 1 chr5B.!!$R1 1102
10 TraesCS5D01G358000 chr5B 533382726 533383811 1085 True 741.000000 741 79.313000 3451 4541 1 chr5B.!!$R3 1090
11 TraesCS5D01G358000 chr5B 533479971 533481220 1249 True 549.000000 549 74.941000 1080 2332 1 chr5B.!!$R4 1252
12 TraesCS5D01G358000 chr2B 20146453 20148069 1616 False 1230.000000 1230 80.690000 3450 5078 1 chr2B.!!$F1 1628
13 TraesCS5D01G358000 chr2B 65045469 65048934 3465 False 781.000000 913 76.987500 997 4941 2 chr2B.!!$F3 3944
14 TraesCS5D01G358000 chr2A 14728941 14730560 1619 True 1188.000000 1188 80.218000 3450 5078 1 chr2A.!!$R4 1628
15 TraesCS5D01G358000 chr2A 14719708 14721231 1523 True 1153.000000 1153 80.559000 3450 4967 1 chr2A.!!$R3 1517
16 TraesCS5D01G358000 chr2A 14739201 14740604 1403 True 1147.000000 1147 81.653000 3531 4941 1 chr2A.!!$R5 1410
17 TraesCS5D01G358000 chr2A 14702088 14703706 1618 True 1133.000000 1133 79.723000 3450 5078 1 chr2A.!!$R2 1628
18 TraesCS5D01G358000 chr2A 14710473 14714295 3822 True 983.000000 1216 79.643000 1080 4941 2 chr2A.!!$R6 3861
19 TraesCS5D01G358000 chr2D 12631060 12632550 1490 True 718.000000 1175 81.623500 34 4941 2 chr2D.!!$R4 4907
20 TraesCS5D01G358000 chr2D 12625216 12626755 1539 True 577.500000 911 81.135500 34 4615 2 chr2D.!!$R3 4581
21 TraesCS5D01G358000 chrUn 63295003 63296294 1291 True 464.000000 464 73.636000 1043 2340 1 chrUn.!!$R1 1297
22 TraesCS5D01G358000 chrUn 319149209 319150501 1292 True 464.000000 464 73.676000 1043 2340 1 chrUn.!!$R3 1297

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 178 0.107459 GGAGAACCCAGATGACAGGC 60.107 60.0 0.00 0.0 34.14 4.85 F
1181 1841 0.321671 TTCTCGCCTTCCAACTCCAG 59.678 55.0 0.00 0.0 0.00 3.86 F
1930 2615 0.586319 CCGCTATGGTTATTGTGGCG 59.414 55.0 0.00 0.0 40.64 5.69 F
2317 3005 1.142185 CGGCAGCGACACACTCTATG 61.142 60.0 0.00 0.0 0.00 2.23 F
3017 4104 0.165944 CAAGTGGCGGCTAAGTTTCG 59.834 55.0 11.43 0.0 0.00 3.46 F
3602 5639 0.521291 TTGAGGAAATTGCCTTCGCG 59.479 50.0 6.39 0.0 38.73 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1930 2615 0.318699 TCATCGCAGTAGCCGTATGC 60.319 55.000 0.00 0.00 41.71 3.14 R
2332 3020 0.729116 CCAGATGATGTTGCGTCCAC 59.271 55.000 0.00 0.00 0.00 4.02 R
2760 3842 0.808755 ATTTAAAGGCTTGACCGCGG 59.191 50.000 26.86 26.86 46.52 6.46 R
4265 6546 0.936297 ACTACGTTCCGACAACACGC 60.936 55.000 0.00 0.00 37.44 5.34 R
4738 7118 4.141367 TGGGTTCTCTTGGACACATAACAA 60.141 41.667 0.00 0.00 0.00 2.83 R
5481 9081 0.232303 GTTGAGAGAAACCGCACACG 59.768 55.000 0.00 0.00 39.67 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.670227 GAAGTGGACCGAATTTCTGAAG 57.330 45.455 0.00 0.00 0.00 3.02
22 23 2.427506 AGTGGACCGAATTTCTGAAGC 58.572 47.619 0.00 0.00 0.00 3.86
23 24 1.128692 GTGGACCGAATTTCTGAAGCG 59.871 52.381 0.00 0.00 0.00 4.68
24 25 1.270625 TGGACCGAATTTCTGAAGCGT 60.271 47.619 8.02 0.00 0.00 5.07
25 26 1.393883 GGACCGAATTTCTGAAGCGTC 59.606 52.381 0.00 0.00 0.00 5.19
26 27 2.338500 GACCGAATTTCTGAAGCGTCT 58.662 47.619 0.31 0.00 0.00 4.18
27 28 2.737252 GACCGAATTTCTGAAGCGTCTT 59.263 45.455 0.31 0.00 0.00 3.01
28 29 3.139077 ACCGAATTTCTGAAGCGTCTTT 58.861 40.909 0.31 0.00 0.00 2.52
29 30 3.564225 ACCGAATTTCTGAAGCGTCTTTT 59.436 39.130 0.31 0.00 0.00 2.27
30 31 4.753107 ACCGAATTTCTGAAGCGTCTTTTA 59.247 37.500 0.31 0.00 0.00 1.52
31 32 5.080068 CCGAATTTCTGAAGCGTCTTTTAC 58.920 41.667 0.31 0.00 0.00 2.01
32 33 5.107065 CCGAATTTCTGAAGCGTCTTTTACT 60.107 40.000 0.31 0.00 0.00 2.24
33 34 6.363473 CGAATTTCTGAAGCGTCTTTTACTT 58.637 36.000 0.31 0.00 0.00 2.24
34 35 6.851330 CGAATTTCTGAAGCGTCTTTTACTTT 59.149 34.615 0.31 0.00 0.00 2.66
35 36 7.149288 CGAATTTCTGAAGCGTCTTTTACTTTG 60.149 37.037 0.31 0.00 0.00 2.77
36 37 6.431198 TTTCTGAAGCGTCTTTTACTTTGT 57.569 33.333 0.31 0.00 0.00 2.83
37 38 6.431198 TTCTGAAGCGTCTTTTACTTTGTT 57.569 33.333 0.31 0.00 0.00 2.83
38 39 6.044512 TCTGAAGCGTCTTTTACTTTGTTC 57.955 37.500 0.31 0.00 0.00 3.18
39 40 5.815740 TCTGAAGCGTCTTTTACTTTGTTCT 59.184 36.000 0.31 0.00 0.00 3.01
40 41 6.982141 TCTGAAGCGTCTTTTACTTTGTTCTA 59.018 34.615 0.31 0.00 0.00 2.10
41 42 7.169308 TCTGAAGCGTCTTTTACTTTGTTCTAG 59.831 37.037 0.31 0.00 0.00 2.43
42 43 6.982141 TGAAGCGTCTTTTACTTTGTTCTAGA 59.018 34.615 0.31 0.00 0.00 2.43
43 44 6.766452 AGCGTCTTTTACTTTGTTCTAGAC 57.234 37.500 0.00 0.00 0.00 2.59
44 45 6.278363 AGCGTCTTTTACTTTGTTCTAGACA 58.722 36.000 0.00 0.00 36.19 3.41
45 46 6.929606 AGCGTCTTTTACTTTGTTCTAGACAT 59.070 34.615 0.00 0.00 38.26 3.06
46 47 7.010023 GCGTCTTTTACTTTGTTCTAGACATG 58.990 38.462 0.00 0.00 38.26 3.21
47 48 7.510630 CGTCTTTTACTTTGTTCTAGACATGG 58.489 38.462 0.00 0.00 38.26 3.66
48 49 7.384115 CGTCTTTTACTTTGTTCTAGACATGGA 59.616 37.037 0.00 0.00 38.26 3.41
49 50 9.052759 GTCTTTTACTTTGTTCTAGACATGGAA 57.947 33.333 0.00 0.00 38.26 3.53
50 51 9.793259 TCTTTTACTTTGTTCTAGACATGGAAT 57.207 29.630 0.00 0.00 38.26 3.01
55 56 8.498054 ACTTTGTTCTAGACATGGAATATGTG 57.502 34.615 0.00 0.00 38.26 3.21
56 57 7.554118 ACTTTGTTCTAGACATGGAATATGTGG 59.446 37.037 0.00 0.00 38.26 4.17
57 58 6.806668 TGTTCTAGACATGGAATATGTGGA 57.193 37.500 0.00 0.00 32.00 4.02
58 59 7.194112 TGTTCTAGACATGGAATATGTGGAA 57.806 36.000 0.00 0.00 32.00 3.53
59 60 7.275183 TGTTCTAGACATGGAATATGTGGAAG 58.725 38.462 0.00 0.00 32.00 3.46
60 61 6.425210 TCTAGACATGGAATATGTGGAAGG 57.575 41.667 0.00 0.00 31.52 3.46
61 62 6.143206 TCTAGACATGGAATATGTGGAAGGA 58.857 40.000 0.00 0.00 31.52 3.36
62 63 5.715439 AGACATGGAATATGTGGAAGGAA 57.285 39.130 0.00 0.00 31.52 3.36
63 64 5.688807 AGACATGGAATATGTGGAAGGAAG 58.311 41.667 0.00 0.00 31.52 3.46
64 65 4.796606 ACATGGAATATGTGGAAGGAAGG 58.203 43.478 0.00 0.00 0.00 3.46
65 66 3.951563 TGGAATATGTGGAAGGAAGGG 57.048 47.619 0.00 0.00 0.00 3.95
66 67 3.469859 TGGAATATGTGGAAGGAAGGGA 58.530 45.455 0.00 0.00 0.00 4.20
67 68 3.855599 TGGAATATGTGGAAGGAAGGGAA 59.144 43.478 0.00 0.00 0.00 3.97
68 69 4.079787 TGGAATATGTGGAAGGAAGGGAAG 60.080 45.833 0.00 0.00 0.00 3.46
69 70 4.166144 GGAATATGTGGAAGGAAGGGAAGA 59.834 45.833 0.00 0.00 0.00 2.87
70 71 4.779993 ATATGTGGAAGGAAGGGAAGAC 57.220 45.455 0.00 0.00 0.00 3.01
71 72 2.118403 TGTGGAAGGAAGGGAAGACT 57.882 50.000 0.00 0.00 0.00 3.24
72 73 1.699634 TGTGGAAGGAAGGGAAGACTG 59.300 52.381 0.00 0.00 0.00 3.51
73 74 0.693049 TGGAAGGAAGGGAAGACTGC 59.307 55.000 0.00 0.00 0.00 4.40
74 75 0.988063 GGAAGGAAGGGAAGACTGCT 59.012 55.000 0.00 0.00 0.00 4.24
75 76 1.339535 GGAAGGAAGGGAAGACTGCTG 60.340 57.143 0.00 0.00 0.00 4.41
76 77 1.625818 GAAGGAAGGGAAGACTGCTGA 59.374 52.381 0.00 0.00 0.00 4.26
77 78 1.963985 AGGAAGGGAAGACTGCTGAT 58.036 50.000 0.00 0.00 0.00 2.90
78 79 2.273619 AGGAAGGGAAGACTGCTGATT 58.726 47.619 0.00 0.00 0.00 2.57
79 80 2.646798 AGGAAGGGAAGACTGCTGATTT 59.353 45.455 0.00 0.00 0.00 2.17
80 81 3.846588 AGGAAGGGAAGACTGCTGATTTA 59.153 43.478 0.00 0.00 0.00 1.40
81 82 3.942115 GGAAGGGAAGACTGCTGATTTAC 59.058 47.826 0.00 0.00 0.00 2.01
82 83 3.636153 AGGGAAGACTGCTGATTTACC 57.364 47.619 0.00 1.51 0.00 2.85
83 84 2.093447 AGGGAAGACTGCTGATTTACCG 60.093 50.000 0.00 0.00 0.00 4.02
84 85 2.280628 GGAAGACTGCTGATTTACCGG 58.719 52.381 0.00 0.00 0.00 5.28
85 86 2.093658 GGAAGACTGCTGATTTACCGGA 60.094 50.000 9.46 0.00 0.00 5.14
86 87 2.674796 AGACTGCTGATTTACCGGAC 57.325 50.000 9.46 0.00 0.00 4.79
87 88 2.180276 AGACTGCTGATTTACCGGACT 58.820 47.619 9.46 0.00 0.00 3.85
88 89 2.166664 AGACTGCTGATTTACCGGACTC 59.833 50.000 9.46 0.00 0.00 3.36
89 90 1.899814 ACTGCTGATTTACCGGACTCA 59.100 47.619 9.46 4.08 0.00 3.41
90 91 2.501723 ACTGCTGATTTACCGGACTCAT 59.498 45.455 9.46 0.00 0.00 2.90
91 92 3.126831 CTGCTGATTTACCGGACTCATC 58.873 50.000 9.46 4.54 0.00 2.92
92 93 2.766263 TGCTGATTTACCGGACTCATCT 59.234 45.455 9.46 0.00 0.00 2.90
93 94 3.958147 TGCTGATTTACCGGACTCATCTA 59.042 43.478 9.46 0.00 0.00 1.98
94 95 4.588951 TGCTGATTTACCGGACTCATCTAT 59.411 41.667 9.46 0.00 0.00 1.98
95 96 5.164954 GCTGATTTACCGGACTCATCTATC 58.835 45.833 9.46 0.00 0.00 2.08
96 97 5.279006 GCTGATTTACCGGACTCATCTATCA 60.279 44.000 9.46 4.69 0.00 2.15
97 98 6.573289 GCTGATTTACCGGACTCATCTATCAT 60.573 42.308 9.46 0.00 0.00 2.45
98 99 6.691508 TGATTTACCGGACTCATCTATCATG 58.308 40.000 9.46 0.00 0.00 3.07
99 100 5.468540 TTTACCGGACTCATCTATCATGG 57.531 43.478 9.46 0.00 0.00 3.66
100 101 3.244887 ACCGGACTCATCTATCATGGA 57.755 47.619 9.46 0.00 0.00 3.41
101 102 3.784178 ACCGGACTCATCTATCATGGAT 58.216 45.455 9.46 0.00 0.00 3.41
102 103 4.935578 ACCGGACTCATCTATCATGGATA 58.064 43.478 9.46 0.00 0.00 2.59
103 104 4.707448 ACCGGACTCATCTATCATGGATAC 59.293 45.833 9.46 0.00 0.00 2.24
104 105 4.952957 CCGGACTCATCTATCATGGATACT 59.047 45.833 0.00 0.00 37.61 2.12
105 106 5.420421 CCGGACTCATCTATCATGGATACTT 59.580 44.000 0.00 0.00 37.61 2.24
106 107 6.328714 CGGACTCATCTATCATGGATACTTG 58.671 44.000 0.00 0.00 42.84 3.16
107 108 6.071672 CGGACTCATCTATCATGGATACTTGT 60.072 42.308 0.00 0.00 42.16 3.16
108 109 7.524532 CGGACTCATCTATCATGGATACTTGTT 60.525 40.741 0.00 0.00 42.16 2.83
109 110 7.816995 GGACTCATCTATCATGGATACTTGTTC 59.183 40.741 0.00 0.00 42.16 3.18
110 111 8.255111 ACTCATCTATCATGGATACTTGTTCA 57.745 34.615 0.00 0.00 42.16 3.18
111 112 8.708378 ACTCATCTATCATGGATACTTGTTCAA 58.292 33.333 0.00 0.00 42.16 2.69
112 113 8.893219 TCATCTATCATGGATACTTGTTCAAC 57.107 34.615 0.00 0.00 42.16 3.18
113 114 7.653311 TCATCTATCATGGATACTTGTTCAACG 59.347 37.037 0.00 0.00 42.16 4.10
114 115 6.280643 TCTATCATGGATACTTGTTCAACGG 58.719 40.000 0.00 0.00 42.16 4.44
115 116 4.545208 TCATGGATACTTGTTCAACGGA 57.455 40.909 0.00 0.00 42.16 4.69
116 117 5.097742 TCATGGATACTTGTTCAACGGAT 57.902 39.130 0.00 0.00 42.16 4.18
117 118 4.875536 TCATGGATACTTGTTCAACGGATG 59.124 41.667 0.00 0.00 42.16 3.51
118 119 4.545208 TGGATACTTGTTCAACGGATGA 57.455 40.909 0.00 0.00 34.46 2.92
119 120 4.900684 TGGATACTTGTTCAACGGATGAA 58.099 39.130 0.00 0.00 41.28 2.57
120 121 4.935205 TGGATACTTGTTCAACGGATGAAG 59.065 41.667 0.51 0.00 43.15 3.02
121 122 5.512404 TGGATACTTGTTCAACGGATGAAGT 60.512 40.000 0.51 0.00 43.15 3.01
122 123 6.966490 TGGATACTTGTTCAACGGATGAAGTT 60.966 38.462 0.51 0.00 43.15 2.66
123 124 8.387015 TGGATACTTGTTCAACGGATGAAGTTT 61.387 37.037 0.51 0.00 43.15 2.66
128 129 4.647424 TTCAACGGATGAAGTTTTGCTT 57.353 36.364 0.00 0.00 43.08 3.91
129 130 4.647424 TCAACGGATGAAGTTTTGCTTT 57.353 36.364 0.00 0.00 37.59 3.51
130 131 4.358851 TCAACGGATGAAGTTTTGCTTTG 58.641 39.130 0.00 0.00 37.59 2.77
131 132 4.111916 CAACGGATGAAGTTTTGCTTTGT 58.888 39.130 0.00 0.00 37.59 2.83
132 133 3.705604 ACGGATGAAGTTTTGCTTTGTG 58.294 40.909 0.00 0.00 37.59 3.33
133 134 3.130340 ACGGATGAAGTTTTGCTTTGTGT 59.870 39.130 0.00 0.00 37.59 3.72
134 135 3.730715 CGGATGAAGTTTTGCTTTGTGTC 59.269 43.478 0.00 0.00 37.59 3.67
135 136 4.051237 GGATGAAGTTTTGCTTTGTGTCC 58.949 43.478 0.00 0.00 37.59 4.02
136 137 4.441356 GGATGAAGTTTTGCTTTGTGTCCA 60.441 41.667 0.00 0.00 37.59 4.02
137 138 4.734398 TGAAGTTTTGCTTTGTGTCCAT 57.266 36.364 0.00 0.00 37.59 3.41
138 139 4.431809 TGAAGTTTTGCTTTGTGTCCATG 58.568 39.130 0.00 0.00 37.59 3.66
139 140 4.081752 TGAAGTTTTGCTTTGTGTCCATGT 60.082 37.500 0.00 0.00 37.59 3.21
140 141 5.126222 TGAAGTTTTGCTTTGTGTCCATGTA 59.874 36.000 0.00 0.00 37.59 2.29
141 142 5.186996 AGTTTTGCTTTGTGTCCATGTAG 57.813 39.130 0.00 0.00 0.00 2.74
142 143 3.641437 TTTGCTTTGTGTCCATGTAGC 57.359 42.857 0.00 0.00 0.00 3.58
143 144 2.268762 TGCTTTGTGTCCATGTAGCA 57.731 45.000 0.00 0.00 36.38 3.49
144 145 1.879380 TGCTTTGTGTCCATGTAGCAC 59.121 47.619 0.00 0.00 34.05 4.40
145 146 2.154462 GCTTTGTGTCCATGTAGCACT 58.846 47.619 11.15 0.00 0.00 4.40
146 147 2.160417 GCTTTGTGTCCATGTAGCACTC 59.840 50.000 11.15 0.00 0.00 3.51
147 148 3.668447 CTTTGTGTCCATGTAGCACTCT 58.332 45.455 11.15 0.00 0.00 3.24
148 149 3.769739 TTGTGTCCATGTAGCACTCTT 57.230 42.857 11.15 0.00 0.00 2.85
149 150 3.044235 TGTGTCCATGTAGCACTCTTG 57.956 47.619 11.15 0.00 0.00 3.02
150 151 2.368548 TGTGTCCATGTAGCACTCTTGT 59.631 45.455 11.15 0.00 0.00 3.16
151 152 2.738846 GTGTCCATGTAGCACTCTTGTG 59.261 50.000 0.00 0.00 46.37 3.33
152 153 2.368548 TGTCCATGTAGCACTCTTGTGT 59.631 45.455 0.00 0.00 45.44 3.72
153 154 2.738846 GTCCATGTAGCACTCTTGTGTG 59.261 50.000 0.00 0.00 45.44 3.82
154 155 2.368548 TCCATGTAGCACTCTTGTGTGT 59.631 45.455 5.02 0.00 45.44 3.72
155 156 2.481568 CCATGTAGCACTCTTGTGTGTG 59.518 50.000 5.02 0.00 45.44 3.82
160 161 3.384816 CACTCTTGTGTGTGCAGGA 57.615 52.632 0.00 0.00 39.24 3.86
161 162 1.224075 CACTCTTGTGTGTGCAGGAG 58.776 55.000 0.00 4.09 44.80 3.69
162 163 1.123077 ACTCTTGTGTGTGCAGGAGA 58.877 50.000 11.25 0.00 42.83 3.71
163 164 1.486310 ACTCTTGTGTGTGCAGGAGAA 59.514 47.619 11.25 0.00 42.83 2.87
164 165 1.869767 CTCTTGTGTGTGCAGGAGAAC 59.130 52.381 0.00 0.00 42.83 3.01
165 166 0.947244 CTTGTGTGTGCAGGAGAACC 59.053 55.000 0.00 0.00 0.00 3.62
166 167 0.465460 TTGTGTGTGCAGGAGAACCC 60.465 55.000 0.00 0.00 36.73 4.11
167 168 1.148273 GTGTGTGCAGGAGAACCCA 59.852 57.895 0.00 0.00 37.41 4.51
168 169 0.886490 GTGTGTGCAGGAGAACCCAG 60.886 60.000 0.00 0.00 37.41 4.45
169 170 1.053835 TGTGTGCAGGAGAACCCAGA 61.054 55.000 0.00 0.00 37.41 3.86
170 171 0.326264 GTGTGCAGGAGAACCCAGAT 59.674 55.000 0.00 0.00 37.41 2.90
171 172 0.325933 TGTGCAGGAGAACCCAGATG 59.674 55.000 0.00 0.00 37.41 2.90
172 173 0.615331 GTGCAGGAGAACCCAGATGA 59.385 55.000 0.00 0.00 37.41 2.92
173 174 0.615331 TGCAGGAGAACCCAGATGAC 59.385 55.000 0.00 0.00 37.41 3.06
174 175 0.615331 GCAGGAGAACCCAGATGACA 59.385 55.000 0.00 0.00 37.41 3.58
175 176 1.406614 GCAGGAGAACCCAGATGACAG 60.407 57.143 0.00 0.00 37.41 3.51
176 177 1.209019 CAGGAGAACCCAGATGACAGG 59.791 57.143 0.00 0.00 37.41 4.00
177 178 0.107459 GGAGAACCCAGATGACAGGC 60.107 60.000 0.00 0.00 34.14 4.85
178 179 0.107459 GAGAACCCAGATGACAGGCC 60.107 60.000 0.00 0.00 0.00 5.19
179 180 0.842030 AGAACCCAGATGACAGGCCA 60.842 55.000 5.01 0.00 0.00 5.36
180 181 0.678048 GAACCCAGATGACAGGCCAC 60.678 60.000 5.01 0.00 0.00 5.01
181 182 1.426251 AACCCAGATGACAGGCCACA 61.426 55.000 5.01 2.06 0.00 4.17
182 183 1.210204 ACCCAGATGACAGGCCACAT 61.210 55.000 5.01 7.73 0.00 3.21
183 184 0.839277 CCCAGATGACAGGCCACATA 59.161 55.000 5.01 0.00 0.00 2.29
184 185 1.422781 CCCAGATGACAGGCCACATAT 59.577 52.381 5.01 1.93 0.00 1.78
185 186 2.501261 CCAGATGACAGGCCACATATG 58.499 52.381 18.55 18.55 36.08 1.78
186 187 2.158711 CCAGATGACAGGCCACATATGT 60.159 50.000 21.49 1.41 35.02 2.29
187 188 3.136763 CAGATGACAGGCCACATATGTC 58.863 50.000 13.71 13.71 42.90 3.06
190 191 3.198409 TGACAGGCCACATATGTCATC 57.802 47.619 18.12 0.00 46.17 2.92
191 192 2.773661 TGACAGGCCACATATGTCATCT 59.226 45.455 18.12 0.56 46.17 2.90
192 193 3.966665 TGACAGGCCACATATGTCATCTA 59.033 43.478 18.12 0.00 46.17 1.98
193 194 4.594491 TGACAGGCCACATATGTCATCTAT 59.406 41.667 18.12 0.00 46.17 1.98
194 195 5.072193 TGACAGGCCACATATGTCATCTATT 59.928 40.000 18.12 0.00 46.17 1.73
195 196 5.311265 ACAGGCCACATATGTCATCTATTG 58.689 41.667 5.01 1.60 0.00 1.90
196 197 5.163163 ACAGGCCACATATGTCATCTATTGT 60.163 40.000 5.01 2.19 0.00 2.71
197 198 5.180680 CAGGCCACATATGTCATCTATTGTG 59.819 44.000 5.01 9.49 0.00 3.33
198 199 5.065914 GGCCACATATGTCATCTATTGTGT 58.934 41.667 5.07 0.00 0.00 3.72
199 200 5.532406 GGCCACATATGTCATCTATTGTGTT 59.468 40.000 5.07 0.00 0.00 3.32
200 201 6.293626 GGCCACATATGTCATCTATTGTGTTC 60.294 42.308 5.07 7.52 0.00 3.18
201 202 6.564686 GCCACATATGTCATCTATTGTGTTCG 60.565 42.308 5.07 0.00 0.00 3.95
202 203 6.479990 CCACATATGTCATCTATTGTGTTCGT 59.520 38.462 5.07 0.00 0.00 3.85
203 204 7.306807 CCACATATGTCATCTATTGTGTTCGTC 60.307 40.741 5.07 0.00 0.00 4.20
204 205 6.701841 ACATATGTCATCTATTGTGTTCGTCC 59.298 38.462 1.41 0.00 0.00 4.79
205 206 4.801330 TGTCATCTATTGTGTTCGTCCT 57.199 40.909 0.00 0.00 0.00 3.85
206 207 5.907866 TGTCATCTATTGTGTTCGTCCTA 57.092 39.130 0.00 0.00 0.00 2.94
243 245 1.214305 ACTTCCTGCCCCCAATAGCA 61.214 55.000 0.00 0.00 37.46 3.49
245 247 1.505151 TTCCTGCCCCCAATAGCACA 61.505 55.000 0.00 0.00 34.68 4.57
335 337 4.499357 GGTGTTACTATCACCGAGATGGAC 60.499 50.000 7.88 0.00 44.34 4.02
404 406 7.898309 GCTCTTTGAAACTGTATGTATAACACG 59.102 37.037 0.00 0.00 0.00 4.49
473 499 5.249420 GGTCTCTATAATTTCCAGGCATCC 58.751 45.833 0.00 0.00 0.00 3.51
508 539 9.208022 TCAGAAGTTGTTATCTTATGTGTTCTG 57.792 33.333 0.00 0.00 38.89 3.02
556 587 8.206325 ACATTATCTGTAGCAGAAACAAGATG 57.794 34.615 2.80 4.77 44.04 2.90
560 591 2.040278 TGTAGCAGAAACAAGATGCCCT 59.960 45.455 0.00 0.00 40.89 5.19
655 686 7.386059 ACACAATTGGGGATGAGAATAAAAAC 58.614 34.615 13.35 0.00 0.00 2.43
870 904 1.066573 CCTCAGCCGAGATGTCAGTTT 60.067 52.381 0.00 0.00 42.34 2.66
891 934 2.996155 TGACAAGTCGTTCTCTCGTTC 58.004 47.619 0.00 0.00 0.00 3.95
894 937 1.709203 CAAGTCGTTCTCTCGTTCGTG 59.291 52.381 0.00 0.00 0.00 4.35
895 938 1.224075 AGTCGTTCTCTCGTTCGTGA 58.776 50.000 0.00 0.00 0.00 4.35
896 939 1.805345 AGTCGTTCTCTCGTTCGTGAT 59.195 47.619 0.00 0.00 0.00 3.06
897 940 2.998670 AGTCGTTCTCTCGTTCGTGATA 59.001 45.455 0.00 0.00 0.00 2.15
898 941 3.062369 AGTCGTTCTCTCGTTCGTGATAG 59.938 47.826 0.00 0.00 0.00 2.08
899 942 2.102633 CGTTCTCTCGTTCGTGATAGC 58.897 52.381 0.00 0.00 0.00 2.97
900 943 2.475685 CGTTCTCTCGTTCGTGATAGCA 60.476 50.000 0.00 0.00 0.00 3.49
901 944 3.102276 GTTCTCTCGTTCGTGATAGCAG 58.898 50.000 0.00 0.00 0.00 4.24
902 945 2.357075 TCTCTCGTTCGTGATAGCAGT 58.643 47.619 0.00 0.00 0.00 4.40
903 946 2.747989 TCTCTCGTTCGTGATAGCAGTT 59.252 45.455 0.00 0.00 0.00 3.16
904 947 3.190744 TCTCTCGTTCGTGATAGCAGTTT 59.809 43.478 0.00 0.00 0.00 2.66
1053 1692 4.008330 CCACTGCTGTTCTGATCATTCTT 58.992 43.478 0.00 0.00 0.00 2.52
1076 1715 0.861837 CTCTTGCCGTTGAGTGTGTC 59.138 55.000 0.00 0.00 0.00 3.67
1077 1716 0.531974 TCTTGCCGTTGAGTGTGTCC 60.532 55.000 0.00 0.00 0.00 4.02
1078 1717 1.831389 CTTGCCGTTGAGTGTGTCCG 61.831 60.000 0.00 0.00 0.00 4.79
1181 1841 0.321671 TTCTCGCCTTCCAACTCCAG 59.678 55.000 0.00 0.00 0.00 3.86
1182 1842 1.743252 CTCGCCTTCCAACTCCAGC 60.743 63.158 0.00 0.00 0.00 4.85
1183 1843 2.032528 CGCCTTCCAACTCCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
1184 1844 1.377725 CGCCTTCCAACTCCAGCAT 60.378 57.895 0.00 0.00 0.00 3.79
1309 1975 1.679898 CTCTCCCTCACCAACACCC 59.320 63.158 0.00 0.00 0.00 4.61
1337 2003 2.097036 TGTTCTATCCGACGGTGATGT 58.903 47.619 14.79 0.00 0.00 3.06
1512 2184 3.207669 CCTGGCATGAAGCTCCGC 61.208 66.667 0.00 0.00 44.79 5.54
1829 2514 2.298163 CCAGGTACGTGTTGACCTACTT 59.702 50.000 14.08 0.00 44.54 2.24
1845 2530 4.965532 ACCTACTTCGGAGAGTACCTAGTA 59.034 45.833 0.00 0.00 38.43 1.82
1890 2575 0.604578 CGTGGTTAGTCCTCGGGAAA 59.395 55.000 0.00 0.00 45.75 3.13
1930 2615 0.586319 CCGCTATGGTTATTGTGGCG 59.414 55.000 0.00 0.00 40.64 5.69
1993 2678 2.429971 TGCAAGTGTTTTGATGGCTTCA 59.570 40.909 0.00 0.00 0.00 3.02
2248 2936 2.126424 GAGACGTGACGAGGTGCC 60.126 66.667 13.70 0.00 0.00 5.01
2317 3005 1.142185 CGGCAGCGACACACTCTATG 61.142 60.000 0.00 0.00 0.00 2.23
2327 3015 2.891580 ACACACTCTATGTCCGACTTGT 59.108 45.455 0.00 0.00 40.64 3.16
2367 3055 2.042944 GGTGCCAAATCCCTCCCC 60.043 66.667 0.00 0.00 0.00 4.81
2382 3267 3.301274 CCTCCCCCTATACTAGCTATGC 58.699 54.545 0.00 0.00 0.00 3.14
2534 3490 9.030301 CATGGTTAAAACTCAAAGGTAAACTTG 57.970 33.333 0.00 0.00 39.96 3.16
2548 3506 2.667473 AACTTGCTATTCCGCTACGT 57.333 45.000 0.00 0.00 0.00 3.57
2549 3507 1.922570 ACTTGCTATTCCGCTACGTG 58.077 50.000 0.00 0.00 0.00 4.49
2674 3756 9.802039 TTAGGTGAGTTAATGATTGGTTTAACT 57.198 29.630 7.57 7.57 46.19 2.24
2733 3815 8.636213 ACAATATTCAAGCTATTTCCTCCATTG 58.364 33.333 0.00 0.00 0.00 2.82
2762 3844 7.979115 TTAAATGAAGTTCAACTTTTGTCCG 57.021 32.000 10.14 0.00 38.80 4.79
2764 3846 2.223157 TGAAGTTCAACTTTTGTCCGCG 60.223 45.455 3.76 0.00 38.80 6.46
2771 3853 1.082104 CTTTTGTCCGCGGTCAAGC 60.082 57.895 30.87 15.99 0.00 4.01
2801 3883 6.839124 ATATGACCAAGTCTGCATGAAAAA 57.161 33.333 0.00 0.00 33.15 1.94
2933 4015 9.274206 ACTCTAAATTCTGACTTAGGACAAAAC 57.726 33.333 6.08 0.00 0.00 2.43
3005 4092 4.216472 AGCTAAGTTTTCTAAGCAAGTGGC 59.784 41.667 0.00 0.00 45.30 5.01
3017 4104 0.165944 CAAGTGGCGGCTAAGTTTCG 59.834 55.000 11.43 0.00 0.00 3.46
3079 4166 7.609056 ACCGAATAATATAAAGTAGCCATCGT 58.391 34.615 0.00 0.00 0.00 3.73
3103 4190 4.470334 TTTTTCTGCCTGCAGTTTTCTT 57.530 36.364 17.96 0.00 43.96 2.52
3104 4191 3.441496 TTTCTGCCTGCAGTTTTCTTG 57.559 42.857 17.96 0.00 43.96 3.02
3111 4198 3.430790 GCCTGCAGTTTTCTTGGTTTCTT 60.431 43.478 13.81 0.00 0.00 2.52
3119 4206 5.105351 AGTTTTCTTGGTTTCTTTGGACTGG 60.105 40.000 0.00 0.00 0.00 4.00
3122 4209 5.319043 TCTTGGTTTCTTTGGACTGGTAT 57.681 39.130 0.00 0.00 0.00 2.73
3157 4244 4.591498 ACTGACATATTGGCCCGTTAGATA 59.409 41.667 0.00 0.00 0.00 1.98
3167 4254 5.747342 TGGCCCGTTAGATAATTTTACTGT 58.253 37.500 0.00 0.00 0.00 3.55
3178 4268 8.918202 AGATAATTTTACTGTGTGGACTTGAA 57.082 30.769 0.00 0.00 0.00 2.69
3194 4284 8.874816 GTGGACTTGAATATTCTACTTGAACTC 58.125 37.037 16.24 0.99 37.52 3.01
3195 4285 8.593679 TGGACTTGAATATTCTACTTGAACTCA 58.406 33.333 16.24 0.68 37.52 3.41
3214 4304 9.770097 TGAACTCATTCTAGGATAAAAGCTATG 57.230 33.333 0.00 0.00 35.69 2.23
3222 4312 5.461032 AGGATAAAAGCTATGAGACTCCG 57.539 43.478 0.00 0.00 0.00 4.63
3235 4677 0.613777 GACTCCGACCTTCCAATGGT 59.386 55.000 0.00 0.00 41.07 3.55
3236 4678 1.003233 GACTCCGACCTTCCAATGGTT 59.997 52.381 0.00 0.00 38.03 3.67
3237 4679 2.235402 GACTCCGACCTTCCAATGGTTA 59.765 50.000 0.00 0.00 38.03 2.85
3238 4680 2.236395 ACTCCGACCTTCCAATGGTTAG 59.764 50.000 0.00 0.00 38.03 2.34
3239 4681 1.557832 TCCGACCTTCCAATGGTTAGG 59.442 52.381 17.38 17.38 38.03 2.69
3240 4682 1.557832 CCGACCTTCCAATGGTTAGGA 59.442 52.381 23.11 0.00 38.03 2.94
3257 4699 8.052202 TGGTTAGGATCACCTCCACCATAAAG 62.052 46.154 13.11 0.00 46.36 1.85
3259 4702 4.503714 GGATCACCTCCACCATAAAGAA 57.496 45.455 0.00 0.00 44.26 2.52
3263 4706 4.101114 TCACCTCCACCATAAAGAAGCTA 58.899 43.478 0.00 0.00 0.00 3.32
3295 4738 4.324874 GCATATCCAGCCCTCCAAATATCT 60.325 45.833 0.00 0.00 0.00 1.98
3305 4748 7.023120 AGCCCTCCAAATATCTATAACTACCA 58.977 38.462 0.00 0.00 0.00 3.25
3511 5548 5.643379 AAACGCAAGAATGTATCATTGGT 57.357 34.783 0.00 0.00 43.62 3.67
3512 5549 6.751514 AAACGCAAGAATGTATCATTGGTA 57.248 33.333 0.00 0.00 43.62 3.25
3517 5554 6.073765 CGCAAGAATGTATCATTGGTAGGTAC 60.074 42.308 0.00 0.00 43.02 3.34
3545 5582 6.936968 ACCTCTTATGAACTTAGTGAAGGT 57.063 37.500 0.00 0.00 36.95 3.50
3560 5597 4.105697 AGTGAAGGTAACCTTTCCCATGAA 59.894 41.667 0.00 0.00 44.82 2.57
3602 5639 0.521291 TTGAGGAAATTGCCTTCGCG 59.479 50.000 6.39 0.00 38.73 5.87
3739 5796 6.088085 GGTTCACATAACAAAAATCAAGCTCG 59.912 38.462 0.00 0.00 0.00 5.03
4258 6539 4.662145 GGAGATAACCAACAAAATGCGAG 58.338 43.478 0.00 0.00 0.00 5.03
4265 6546 2.095263 CCAACAAAATGCGAGTACCCAG 60.095 50.000 0.00 0.00 0.00 4.45
4738 7118 6.877322 AGTTTTACTTTGTATCCACGTAGCAT 59.123 34.615 0.00 0.00 0.00 3.79
4797 7177 7.207383 CCCTCATGTCATTAGTCGTGTTTATA 58.793 38.462 0.00 0.00 0.00 0.98
4962 7345 7.759886 TGAAACGATGGTTCTTCTGTTCTATAG 59.240 37.037 0.00 0.00 34.62 1.31
4963 7346 5.593010 ACGATGGTTCTTCTGTTCTATAGC 58.407 41.667 0.00 0.00 0.00 2.97
4965 7348 5.689514 CGATGGTTCTTCTGTTCTATAGCTG 59.310 44.000 0.00 0.00 0.00 4.24
4994 7377 8.523915 AACATATTATCAAAAGATGTCTGGCA 57.476 30.769 0.00 0.00 30.55 4.92
5001 7384 5.108517 TCAAAAGATGTCTGGCAAAACAAC 58.891 37.500 6.48 4.54 0.00 3.32
5056 7440 8.237811 AGTCATTACCTTTGAATGTGTTTTCT 57.762 30.769 0.00 0.00 36.02 2.52
5065 7449 7.397892 TTTGAATGTGTTTTCTGTTCCACTA 57.602 32.000 0.00 0.00 0.00 2.74
5078 7462 4.523083 TGTTCCACTATTGGCCTTGATAC 58.477 43.478 3.32 0.00 43.56 2.24
5085 7475 3.959495 ATTGGCCTTGATACACCTCAT 57.041 42.857 3.32 0.00 0.00 2.90
5098 7490 3.403038 ACACCTCATTTTGGAAGACGAG 58.597 45.455 0.00 0.00 0.00 4.18
5109 7566 5.890424 TTGGAAGACGAGAAAAACAAGTT 57.110 34.783 0.00 0.00 0.00 2.66
5112 7569 7.186021 TGGAAGACGAGAAAAACAAGTTATC 57.814 36.000 0.00 0.00 0.00 1.75
5118 7575 6.522761 ACGAGAAAAACAAGTTATCGATTCG 58.477 36.000 1.71 4.43 33.23 3.34
5124 7581 3.518590 ACAAGTTATCGATTCGGTGACC 58.481 45.455 10.26 0.00 26.41 4.02
5154 7612 3.251004 GGAACGTGCTGTCATTTCTCTTT 59.749 43.478 0.00 0.00 0.00 2.52
5158 7616 3.250762 CGTGCTGTCATTTCTCTTTTCCA 59.749 43.478 0.00 0.00 0.00 3.53
5288 7751 9.010029 TCATTTCTCAAGGAAACTATAACCAAC 57.990 33.333 0.00 0.00 45.29 3.77
5372 7835 4.787551 TCAGTTCCCAAAACAGCTCTAAA 58.212 39.130 0.00 0.00 0.00 1.85
5390 7853 6.466885 TCTAAACATAAGCTACAGGAGTCC 57.533 41.667 0.00 0.00 0.00 3.85
5448 7911 4.404073 GTCTCCAGGACACATGTTCTATCT 59.596 45.833 0.00 0.00 43.94 1.98
5449 7912 4.403752 TCTCCAGGACACATGTTCTATCTG 59.596 45.833 0.00 0.22 30.53 2.90
5451 7914 3.198635 CCAGGACACATGTTCTATCTGGT 59.801 47.826 16.27 2.59 36.66 4.00
5452 7915 4.437239 CAGGACACATGTTCTATCTGGTC 58.563 47.826 0.00 0.00 30.53 4.02
5467 9067 7.049133 TCTATCTGGTCTCTGTACTCTGTTAC 58.951 42.308 0.00 0.00 0.00 2.50
5481 9081 9.480053 TGTACTCTGTTACTTGGTTAATGTAAC 57.520 33.333 0.00 0.00 43.46 2.50
5487 9087 4.477302 ACTTGGTTAATGTAACGTGTGC 57.523 40.909 0.00 0.00 39.54 4.57
5501 9101 1.295792 GTGTGCGGTTTCTCTCAACA 58.704 50.000 0.00 0.00 0.00 3.33
5505 9105 3.380004 TGTGCGGTTTCTCTCAACAAAAT 59.620 39.130 0.00 0.00 0.00 1.82
5511 9111 8.353684 TGCGGTTTCTCTCAACAAAATAAATAA 58.646 29.630 0.00 0.00 0.00 1.40
5530 9130 2.800881 AACAGCTAACAGCAAAAGCC 57.199 45.000 0.38 0.00 45.56 4.35
5532 9132 3.140325 ACAGCTAACAGCAAAAGCCTA 57.860 42.857 0.38 0.00 45.56 3.93
5534 9134 3.253432 ACAGCTAACAGCAAAAGCCTAAC 59.747 43.478 0.38 0.00 45.56 2.34
5564 9167 4.703897 ACAAACGATGAACTGAAAGAGGA 58.296 39.130 0.00 0.00 37.43 3.71
5565 9168 4.752101 ACAAACGATGAACTGAAAGAGGAG 59.248 41.667 0.00 0.00 37.43 3.69
5566 9169 2.966050 ACGATGAACTGAAAGAGGAGC 58.034 47.619 0.00 0.00 37.43 4.70
5572 9175 0.839853 ACTGAAAGAGGAGCCTGCCT 60.840 55.000 0.00 0.00 42.17 4.75
5594 9197 5.882000 CCTCCATCATTGTACAGTTTGATCA 59.118 40.000 12.49 0.00 0.00 2.92
5609 9212 9.512588 ACAGTTTGATCATTTTCTCAGTATTCT 57.487 29.630 0.00 0.00 0.00 2.40
5610 9213 9.985318 CAGTTTGATCATTTTCTCAGTATTCTC 57.015 33.333 0.00 0.00 0.00 2.87
5611 9214 9.956640 AGTTTGATCATTTTCTCAGTATTCTCT 57.043 29.630 0.00 0.00 0.00 3.10
5617 9220 9.612066 ATCATTTTCTCAGTATTCTCTTTCTCC 57.388 33.333 0.00 0.00 0.00 3.71
5618 9221 8.820831 TCATTTTCTCAGTATTCTCTTTCTCCT 58.179 33.333 0.00 0.00 0.00 3.69
5619 9222 9.097257 CATTTTCTCAGTATTCTCTTTCTCCTC 57.903 37.037 0.00 0.00 0.00 3.71
5620 9223 8.429237 TTTTCTCAGTATTCTCTTTCTCCTCT 57.571 34.615 0.00 0.00 0.00 3.69
5622 9225 9.535170 TTTCTCAGTATTCTCTTTCTCCTCTTA 57.465 33.333 0.00 0.00 0.00 2.10
5623 9226 9.707957 TTCTCAGTATTCTCTTTCTCCTCTTAT 57.292 33.333 0.00 0.00 0.00 1.73
5624 9227 9.707957 TCTCAGTATTCTCTTTCTCCTCTTATT 57.292 33.333 0.00 0.00 0.00 1.40
5636 9239 9.282569 CTTTCTCCTCTTATTTAATGGATGAGG 57.717 37.037 0.00 0.00 40.47 3.86
5637 9240 6.773638 TCTCCTCTTATTTAATGGATGAGGC 58.226 40.000 0.00 0.00 39.36 4.70
5638 9241 6.329986 TCTCCTCTTATTTAATGGATGAGGCA 59.670 38.462 0.00 0.00 39.36 4.75
5639 9242 6.910191 TCCTCTTATTTAATGGATGAGGCAA 58.090 36.000 0.00 0.00 39.36 4.52
5640 9243 7.353525 TCCTCTTATTTAATGGATGAGGCAAA 58.646 34.615 0.00 0.00 39.36 3.68
5641 9244 8.006564 TCCTCTTATTTAATGGATGAGGCAAAT 58.993 33.333 0.00 0.00 39.36 2.32
5642 9245 8.645110 CCTCTTATTTAATGGATGAGGCAAATT 58.355 33.333 0.00 0.00 34.16 1.82
5644 9247 9.820725 TCTTATTTAATGGATGAGGCAAATTTG 57.179 29.630 14.03 14.03 0.00 2.32
5645 9248 9.603921 CTTATTTAATGGATGAGGCAAATTTGT 57.396 29.630 19.03 0.26 0.00 2.83
5646 9249 9.956640 TTATTTAATGGATGAGGCAAATTTGTT 57.043 25.926 19.03 8.37 0.00 2.83
5647 9250 7.670009 TTTAATGGATGAGGCAAATTTGTTG 57.330 32.000 19.03 0.00 0.00 3.33
5648 9251 3.042871 TGGATGAGGCAAATTTGTTGC 57.957 42.857 19.03 6.05 44.22 4.17
5654 9257 3.586430 GCAAATTTGTTGCCTCCGT 57.414 47.368 19.03 0.00 39.38 4.69
5655 9258 1.864565 GCAAATTTGTTGCCTCCGTT 58.135 45.000 19.03 0.00 39.38 4.44
5656 9259 2.209273 GCAAATTTGTTGCCTCCGTTT 58.791 42.857 19.03 0.00 39.38 3.60
5657 9260 2.220824 GCAAATTTGTTGCCTCCGTTTC 59.779 45.455 19.03 0.00 39.38 2.78
5658 9261 2.415697 AATTTGTTGCCTCCGTTTCG 57.584 45.000 0.00 0.00 0.00 3.46
5659 9262 1.600023 ATTTGTTGCCTCCGTTTCGA 58.400 45.000 0.00 0.00 0.00 3.71
5660 9263 1.380524 TTTGTTGCCTCCGTTTCGAA 58.619 45.000 0.00 0.00 0.00 3.71
5661 9264 1.380524 TTGTTGCCTCCGTTTCGAAA 58.619 45.000 6.47 6.47 0.00 3.46
5662 9265 1.380524 TGTTGCCTCCGTTTCGAAAA 58.619 45.000 13.10 0.00 0.00 2.29
5663 9266 1.743958 TGTTGCCTCCGTTTCGAAAAA 59.256 42.857 13.10 0.00 0.00 1.94
5876 9479 6.774673 TCAAGGTGATTTACTATGGTTCACA 58.225 36.000 12.75 0.00 38.71 3.58
5900 9503 4.497100 CGCGAACGATCTCAGAAATAAAC 58.503 43.478 0.00 0.00 43.93 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.814336 GCTTCAGAAATTCGGTCCACTT 59.186 45.455 0.00 0.00 0.00 3.16
5 6 1.393883 GACGCTTCAGAAATTCGGTCC 59.606 52.381 0.00 0.00 0.00 4.46
6 7 2.338500 AGACGCTTCAGAAATTCGGTC 58.662 47.619 0.00 0.00 0.00 4.79
7 8 2.457366 AGACGCTTCAGAAATTCGGT 57.543 45.000 0.00 0.00 0.00 4.69
8 9 3.813529 AAAGACGCTTCAGAAATTCGG 57.186 42.857 0.00 0.00 0.00 4.30
9 10 5.916969 AGTAAAAGACGCTTCAGAAATTCG 58.083 37.500 0.00 0.00 0.00 3.34
10 11 7.644157 ACAAAGTAAAAGACGCTTCAGAAATTC 59.356 33.333 0.00 0.00 0.00 2.17
11 12 7.480810 ACAAAGTAAAAGACGCTTCAGAAATT 58.519 30.769 0.00 0.00 0.00 1.82
12 13 7.027778 ACAAAGTAAAAGACGCTTCAGAAAT 57.972 32.000 0.00 0.00 0.00 2.17
13 14 6.431198 ACAAAGTAAAAGACGCTTCAGAAA 57.569 33.333 0.00 0.00 0.00 2.52
14 15 6.315393 AGAACAAAGTAAAAGACGCTTCAGAA 59.685 34.615 0.00 0.00 0.00 3.02
15 16 5.815740 AGAACAAAGTAAAAGACGCTTCAGA 59.184 36.000 0.00 0.00 0.00 3.27
16 17 6.049263 AGAACAAAGTAAAAGACGCTTCAG 57.951 37.500 0.00 0.00 0.00 3.02
17 18 6.982141 TCTAGAACAAAGTAAAAGACGCTTCA 59.018 34.615 0.00 0.00 0.00 3.02
18 19 7.042925 TGTCTAGAACAAAGTAAAAGACGCTTC 60.043 37.037 0.00 0.00 35.71 3.86
19 20 6.759827 TGTCTAGAACAAAGTAAAAGACGCTT 59.240 34.615 0.00 0.00 35.71 4.68
20 21 6.278363 TGTCTAGAACAAAGTAAAAGACGCT 58.722 36.000 0.00 0.00 35.71 5.07
21 22 6.520792 TGTCTAGAACAAAGTAAAAGACGC 57.479 37.500 0.00 0.00 35.71 5.19
22 23 7.384115 TCCATGTCTAGAACAAAGTAAAAGACG 59.616 37.037 0.00 0.00 42.37 4.18
23 24 8.603242 TCCATGTCTAGAACAAAGTAAAAGAC 57.397 34.615 0.00 0.00 42.37 3.01
24 25 9.793259 ATTCCATGTCTAGAACAAAGTAAAAGA 57.207 29.630 0.00 0.00 42.37 2.52
29 30 9.599866 CACATATTCCATGTCTAGAACAAAGTA 57.400 33.333 0.00 0.00 42.37 2.24
30 31 7.554118 CCACATATTCCATGTCTAGAACAAAGT 59.446 37.037 0.00 0.00 42.37 2.66
31 32 7.770433 TCCACATATTCCATGTCTAGAACAAAG 59.230 37.037 0.00 0.00 42.37 2.77
32 33 7.629157 TCCACATATTCCATGTCTAGAACAAA 58.371 34.615 0.00 0.00 42.37 2.83
33 34 7.194112 TCCACATATTCCATGTCTAGAACAA 57.806 36.000 0.00 0.00 42.37 2.83
34 35 6.806668 TCCACATATTCCATGTCTAGAACA 57.193 37.500 0.00 0.00 43.51 3.18
35 36 6.708054 CCTTCCACATATTCCATGTCTAGAAC 59.292 42.308 0.00 0.00 0.00 3.01
36 37 6.615316 TCCTTCCACATATTCCATGTCTAGAA 59.385 38.462 0.00 0.00 0.00 2.10
37 38 6.143206 TCCTTCCACATATTCCATGTCTAGA 58.857 40.000 0.00 0.00 0.00 2.43
38 39 6.425210 TCCTTCCACATATTCCATGTCTAG 57.575 41.667 0.00 0.00 0.00 2.43
39 40 6.183361 CCTTCCTTCCACATATTCCATGTCTA 60.183 42.308 0.00 0.00 0.00 2.59
40 41 5.398353 CCTTCCTTCCACATATTCCATGTCT 60.398 44.000 0.00 0.00 0.00 3.41
41 42 4.823989 CCTTCCTTCCACATATTCCATGTC 59.176 45.833 0.00 0.00 0.00 3.06
42 43 4.386761 CCCTTCCTTCCACATATTCCATGT 60.387 45.833 0.00 0.00 0.00 3.21
43 44 4.141181 TCCCTTCCTTCCACATATTCCATG 60.141 45.833 0.00 0.00 0.00 3.66
44 45 4.054369 TCCCTTCCTTCCACATATTCCAT 58.946 43.478 0.00 0.00 0.00 3.41
45 46 3.469859 TCCCTTCCTTCCACATATTCCA 58.530 45.455 0.00 0.00 0.00 3.53
46 47 4.166144 TCTTCCCTTCCTTCCACATATTCC 59.834 45.833 0.00 0.00 0.00 3.01
47 48 5.104318 AGTCTTCCCTTCCTTCCACATATTC 60.104 44.000 0.00 0.00 0.00 1.75
48 49 4.790790 AGTCTTCCCTTCCTTCCACATATT 59.209 41.667 0.00 0.00 0.00 1.28
49 50 4.164988 CAGTCTTCCCTTCCTTCCACATAT 59.835 45.833 0.00 0.00 0.00 1.78
50 51 3.519510 CAGTCTTCCCTTCCTTCCACATA 59.480 47.826 0.00 0.00 0.00 2.29
51 52 2.307098 CAGTCTTCCCTTCCTTCCACAT 59.693 50.000 0.00 0.00 0.00 3.21
52 53 1.699634 CAGTCTTCCCTTCCTTCCACA 59.300 52.381 0.00 0.00 0.00 4.17
53 54 1.611936 GCAGTCTTCCCTTCCTTCCAC 60.612 57.143 0.00 0.00 0.00 4.02
54 55 0.693049 GCAGTCTTCCCTTCCTTCCA 59.307 55.000 0.00 0.00 0.00 3.53
55 56 0.988063 AGCAGTCTTCCCTTCCTTCC 59.012 55.000 0.00 0.00 0.00 3.46
56 57 1.625818 TCAGCAGTCTTCCCTTCCTTC 59.374 52.381 0.00 0.00 0.00 3.46
57 58 1.734655 TCAGCAGTCTTCCCTTCCTT 58.265 50.000 0.00 0.00 0.00 3.36
58 59 1.963985 ATCAGCAGTCTTCCCTTCCT 58.036 50.000 0.00 0.00 0.00 3.36
59 60 2.797177 AATCAGCAGTCTTCCCTTCC 57.203 50.000 0.00 0.00 0.00 3.46
60 61 3.942115 GGTAAATCAGCAGTCTTCCCTTC 59.058 47.826 0.00 0.00 0.00 3.46
61 62 3.619979 CGGTAAATCAGCAGTCTTCCCTT 60.620 47.826 0.00 0.00 0.00 3.95
62 63 2.093447 CGGTAAATCAGCAGTCTTCCCT 60.093 50.000 0.00 0.00 0.00 4.20
63 64 2.280628 CGGTAAATCAGCAGTCTTCCC 58.719 52.381 0.00 0.00 0.00 3.97
64 65 2.093658 TCCGGTAAATCAGCAGTCTTCC 60.094 50.000 0.00 0.00 0.00 3.46
65 66 2.930682 GTCCGGTAAATCAGCAGTCTTC 59.069 50.000 0.00 0.00 0.00 2.87
66 67 2.567615 AGTCCGGTAAATCAGCAGTCTT 59.432 45.455 0.00 0.00 0.00 3.01
67 68 2.166664 GAGTCCGGTAAATCAGCAGTCT 59.833 50.000 0.00 0.00 0.00 3.24
68 69 2.094182 TGAGTCCGGTAAATCAGCAGTC 60.094 50.000 0.00 0.00 0.00 3.51
69 70 1.899814 TGAGTCCGGTAAATCAGCAGT 59.100 47.619 0.00 0.00 0.00 4.40
70 71 2.672961 TGAGTCCGGTAAATCAGCAG 57.327 50.000 0.00 0.00 0.00 4.24
71 72 2.766263 AGATGAGTCCGGTAAATCAGCA 59.234 45.455 10.82 0.00 30.67 4.41
72 73 3.460857 AGATGAGTCCGGTAAATCAGC 57.539 47.619 0.00 0.15 0.00 4.26
73 74 6.332735 TGATAGATGAGTCCGGTAAATCAG 57.667 41.667 0.00 0.00 0.00 2.90
74 75 6.295292 CCATGATAGATGAGTCCGGTAAATCA 60.295 42.308 0.00 0.00 0.00 2.57
75 76 6.071334 TCCATGATAGATGAGTCCGGTAAATC 60.071 42.308 0.00 1.12 0.00 2.17
76 77 5.780282 TCCATGATAGATGAGTCCGGTAAAT 59.220 40.000 0.00 0.00 0.00 1.40
77 78 5.144832 TCCATGATAGATGAGTCCGGTAAA 58.855 41.667 0.00 0.00 0.00 2.01
78 79 4.736473 TCCATGATAGATGAGTCCGGTAA 58.264 43.478 0.00 0.00 0.00 2.85
79 80 4.382386 TCCATGATAGATGAGTCCGGTA 57.618 45.455 0.00 0.00 0.00 4.02
80 81 3.244887 TCCATGATAGATGAGTCCGGT 57.755 47.619 0.00 0.00 0.00 5.28
81 82 4.952957 AGTATCCATGATAGATGAGTCCGG 59.047 45.833 0.00 0.00 0.00 5.14
82 83 6.071672 ACAAGTATCCATGATAGATGAGTCCG 60.072 42.308 0.00 0.00 0.00 4.79
83 84 7.238486 ACAAGTATCCATGATAGATGAGTCC 57.762 40.000 0.00 0.00 0.00 3.85
84 85 8.363390 TGAACAAGTATCCATGATAGATGAGTC 58.637 37.037 0.00 0.00 0.00 3.36
85 86 8.255111 TGAACAAGTATCCATGATAGATGAGT 57.745 34.615 0.00 0.00 0.00 3.41
86 87 8.986847 GTTGAACAAGTATCCATGATAGATGAG 58.013 37.037 0.00 0.00 0.00 2.90
87 88 7.653311 CGTTGAACAAGTATCCATGATAGATGA 59.347 37.037 0.00 0.00 0.00 2.92
88 89 7.095481 CCGTTGAACAAGTATCCATGATAGATG 60.095 40.741 0.00 0.00 0.00 2.90
89 90 6.931281 CCGTTGAACAAGTATCCATGATAGAT 59.069 38.462 0.00 0.00 0.00 1.98
90 91 6.097696 TCCGTTGAACAAGTATCCATGATAGA 59.902 38.462 0.00 0.00 0.00 1.98
91 92 6.280643 TCCGTTGAACAAGTATCCATGATAG 58.719 40.000 0.00 0.00 0.00 2.08
92 93 6.228616 TCCGTTGAACAAGTATCCATGATA 57.771 37.500 0.00 0.00 0.00 2.15
93 94 5.097742 TCCGTTGAACAAGTATCCATGAT 57.902 39.130 0.00 0.00 0.00 2.45
94 95 4.545208 TCCGTTGAACAAGTATCCATGA 57.455 40.909 0.00 0.00 0.00 3.07
95 96 4.875536 TCATCCGTTGAACAAGTATCCATG 59.124 41.667 0.00 0.00 0.00 3.66
96 97 5.097742 TCATCCGTTGAACAAGTATCCAT 57.902 39.130 0.00 0.00 0.00 3.41
97 98 4.545208 TCATCCGTTGAACAAGTATCCA 57.455 40.909 0.00 0.00 0.00 3.41
98 99 4.935808 ACTTCATCCGTTGAACAAGTATCC 59.064 41.667 0.00 0.00 39.44 2.59
99 100 6.481954 AACTTCATCCGTTGAACAAGTATC 57.518 37.500 0.00 0.00 39.44 2.24
100 101 6.877611 AAACTTCATCCGTTGAACAAGTAT 57.122 33.333 0.00 0.00 39.44 2.12
101 102 6.491394 CAAAACTTCATCCGTTGAACAAGTA 58.509 36.000 0.00 0.00 39.44 2.24
102 103 5.339990 CAAAACTTCATCCGTTGAACAAGT 58.660 37.500 0.00 0.00 39.44 3.16
103 104 4.207019 GCAAAACTTCATCCGTTGAACAAG 59.793 41.667 0.00 0.00 39.44 3.16
104 105 4.109050 GCAAAACTTCATCCGTTGAACAA 58.891 39.130 0.00 0.00 39.44 2.83
105 106 3.380004 AGCAAAACTTCATCCGTTGAACA 59.620 39.130 0.00 0.00 39.44 3.18
106 107 3.964909 AGCAAAACTTCATCCGTTGAAC 58.035 40.909 0.00 0.00 39.44 3.18
107 108 4.647424 AAGCAAAACTTCATCCGTTGAA 57.353 36.364 0.00 0.00 42.09 2.69
108 109 4.142271 ACAAAGCAAAACTTCATCCGTTGA 60.142 37.500 0.00 0.00 37.75 3.18
109 110 4.026640 CACAAAGCAAAACTTCATCCGTTG 60.027 41.667 0.00 0.00 37.75 4.10
110 111 4.111916 CACAAAGCAAAACTTCATCCGTT 58.888 39.130 0.00 0.00 37.75 4.44
111 112 3.130340 ACACAAAGCAAAACTTCATCCGT 59.870 39.130 0.00 0.00 37.75 4.69
112 113 3.705604 ACACAAAGCAAAACTTCATCCG 58.294 40.909 0.00 0.00 37.75 4.18
113 114 4.051237 GGACACAAAGCAAAACTTCATCC 58.949 43.478 0.00 0.00 37.75 3.51
114 115 4.681744 TGGACACAAAGCAAAACTTCATC 58.318 39.130 0.00 0.00 37.75 2.92
115 116 4.734398 TGGACACAAAGCAAAACTTCAT 57.266 36.364 0.00 0.00 37.75 2.57
116 117 4.081752 ACATGGACACAAAGCAAAACTTCA 60.082 37.500 0.00 0.00 37.75 3.02
117 118 4.432712 ACATGGACACAAAGCAAAACTTC 58.567 39.130 0.00 0.00 37.75 3.01
118 119 4.470334 ACATGGACACAAAGCAAAACTT 57.530 36.364 0.00 0.00 41.70 2.66
119 120 4.499696 GCTACATGGACACAAAGCAAAACT 60.500 41.667 0.00 0.00 33.59 2.66
120 121 3.735746 GCTACATGGACACAAAGCAAAAC 59.264 43.478 0.00 0.00 33.59 2.43
121 122 3.382865 TGCTACATGGACACAAAGCAAAA 59.617 39.130 0.00 0.00 37.72 2.44
122 123 2.954989 TGCTACATGGACACAAAGCAAA 59.045 40.909 0.00 0.00 37.72 3.68
123 124 2.293122 GTGCTACATGGACACAAAGCAA 59.707 45.455 9.37 0.00 40.36 3.91
124 125 1.879380 GTGCTACATGGACACAAAGCA 59.121 47.619 9.37 0.00 38.08 3.91
125 126 2.154462 AGTGCTACATGGACACAAAGC 58.846 47.619 14.81 0.00 39.64 3.51
126 127 3.668447 AGAGTGCTACATGGACACAAAG 58.332 45.455 14.81 0.00 39.64 2.77
127 128 3.769739 AGAGTGCTACATGGACACAAA 57.230 42.857 14.81 0.00 39.64 2.83
128 129 3.181455 ACAAGAGTGCTACATGGACACAA 60.181 43.478 14.81 0.00 39.64 3.33
129 130 2.368548 ACAAGAGTGCTACATGGACACA 59.631 45.455 14.81 0.00 39.64 3.72
130 131 2.738846 CACAAGAGTGCTACATGGACAC 59.261 50.000 0.00 2.12 39.21 3.67
131 132 3.044235 CACAAGAGTGCTACATGGACA 57.956 47.619 0.00 0.00 39.21 4.02
143 144 1.123077 TCTCCTGCACACACAAGAGT 58.877 50.000 0.00 0.00 0.00 3.24
144 145 1.869767 GTTCTCCTGCACACACAAGAG 59.130 52.381 0.00 0.00 0.00 2.85
145 146 1.475034 GGTTCTCCTGCACACACAAGA 60.475 52.381 0.00 0.00 0.00 3.02
146 147 0.947244 GGTTCTCCTGCACACACAAG 59.053 55.000 0.00 0.00 0.00 3.16
147 148 0.465460 GGGTTCTCCTGCACACACAA 60.465 55.000 0.00 0.00 0.00 3.33
148 149 1.148273 GGGTTCTCCTGCACACACA 59.852 57.895 0.00 0.00 0.00 3.72
149 150 0.886490 CTGGGTTCTCCTGCACACAC 60.886 60.000 0.00 0.00 36.20 3.82
150 151 1.053835 TCTGGGTTCTCCTGCACACA 61.054 55.000 0.00 0.00 36.20 3.72
151 152 0.326264 ATCTGGGTTCTCCTGCACAC 59.674 55.000 0.00 0.00 36.20 3.82
152 153 0.325933 CATCTGGGTTCTCCTGCACA 59.674 55.000 0.00 0.00 36.20 4.57
153 154 0.615331 TCATCTGGGTTCTCCTGCAC 59.385 55.000 0.00 0.00 36.20 4.57
154 155 0.615331 GTCATCTGGGTTCTCCTGCA 59.385 55.000 0.00 0.00 36.20 4.41
155 156 0.615331 TGTCATCTGGGTTCTCCTGC 59.385 55.000 0.00 0.00 36.20 4.85
156 157 1.209019 CCTGTCATCTGGGTTCTCCTG 59.791 57.143 0.00 0.00 36.20 3.86
157 158 1.577736 CCTGTCATCTGGGTTCTCCT 58.422 55.000 0.00 0.00 36.20 3.69
158 159 0.107459 GCCTGTCATCTGGGTTCTCC 60.107 60.000 0.00 0.00 33.97 3.71
159 160 0.107459 GGCCTGTCATCTGGGTTCTC 60.107 60.000 0.00 0.00 33.97 2.87
160 161 0.842030 TGGCCTGTCATCTGGGTTCT 60.842 55.000 3.32 0.00 33.97 3.01
161 162 0.678048 GTGGCCTGTCATCTGGGTTC 60.678 60.000 3.32 0.00 33.97 3.62
162 163 1.380302 GTGGCCTGTCATCTGGGTT 59.620 57.895 3.32 0.00 33.97 4.11
163 164 1.210204 ATGTGGCCTGTCATCTGGGT 61.210 55.000 3.32 0.00 33.97 4.51
164 165 0.839277 TATGTGGCCTGTCATCTGGG 59.161 55.000 3.32 0.00 33.97 4.45
165 166 2.158711 ACATATGTGGCCTGTCATCTGG 60.159 50.000 7.78 2.90 36.04 3.86
166 167 3.136763 GACATATGTGGCCTGTCATCTG 58.863 50.000 14.43 14.89 39.24 2.90
167 168 2.773661 TGACATATGTGGCCTGTCATCT 59.226 45.455 18.12 4.87 43.10 2.90
168 169 3.198409 TGACATATGTGGCCTGTCATC 57.802 47.619 18.12 2.53 43.10 2.92
171 172 3.482156 AGATGACATATGTGGCCTGTC 57.518 47.619 14.43 13.71 39.74 3.51
172 173 5.163163 ACAATAGATGACATATGTGGCCTGT 60.163 40.000 14.43 0.00 29.75 4.00
173 174 5.180680 CACAATAGATGACATATGTGGCCTG 59.819 44.000 14.43 4.00 29.75 4.85
174 175 5.163163 ACACAATAGATGACATATGTGGCCT 60.163 40.000 14.43 9.11 29.75 5.19
175 176 5.065914 ACACAATAGATGACATATGTGGCC 58.934 41.667 14.43 0.00 29.75 5.36
176 177 6.564686 CGAACACAATAGATGACATATGTGGC 60.565 42.308 14.43 0.00 0.00 5.01
177 178 6.479990 ACGAACACAATAGATGACATATGTGG 59.520 38.462 14.43 4.48 0.00 4.17
178 179 7.306807 GGACGAACACAATAGATGACATATGTG 60.307 40.741 14.43 15.85 0.00 3.21
179 180 6.701841 GGACGAACACAATAGATGACATATGT 59.298 38.462 8.43 8.43 0.00 2.29
180 181 6.925718 AGGACGAACACAATAGATGACATATG 59.074 38.462 0.00 0.00 0.00 1.78
181 182 7.055667 AGGACGAACACAATAGATGACATAT 57.944 36.000 0.00 0.00 0.00 1.78
182 183 6.465439 AGGACGAACACAATAGATGACATA 57.535 37.500 0.00 0.00 0.00 2.29
183 184 5.344743 AGGACGAACACAATAGATGACAT 57.655 39.130 0.00 0.00 0.00 3.06
184 185 4.801330 AGGACGAACACAATAGATGACA 57.199 40.909 0.00 0.00 0.00 3.58
185 186 6.038382 TCTCTAGGACGAACACAATAGATGAC 59.962 42.308 0.00 0.00 0.00 3.06
186 187 6.120220 TCTCTAGGACGAACACAATAGATGA 58.880 40.000 0.00 0.00 0.00 2.92
187 188 6.378710 TCTCTAGGACGAACACAATAGATG 57.621 41.667 0.00 0.00 0.00 2.90
188 189 7.429633 CATTCTCTAGGACGAACACAATAGAT 58.570 38.462 0.00 0.00 0.00 1.98
189 190 6.183360 CCATTCTCTAGGACGAACACAATAGA 60.183 42.308 0.00 0.00 0.00 1.98
190 191 5.980116 CCATTCTCTAGGACGAACACAATAG 59.020 44.000 0.00 0.00 0.00 1.73
191 192 5.655090 TCCATTCTCTAGGACGAACACAATA 59.345 40.000 0.00 0.00 0.00 1.90
192 193 4.466370 TCCATTCTCTAGGACGAACACAAT 59.534 41.667 0.00 0.00 0.00 2.71
193 194 3.830178 TCCATTCTCTAGGACGAACACAA 59.170 43.478 0.00 0.00 0.00 3.33
194 195 3.427573 TCCATTCTCTAGGACGAACACA 58.572 45.455 0.00 0.00 0.00 3.72
195 196 4.425520 CTTCCATTCTCTAGGACGAACAC 58.574 47.826 0.00 0.00 32.62 3.32
196 197 3.119101 GCTTCCATTCTCTAGGACGAACA 60.119 47.826 0.00 0.00 32.62 3.18
197 198 3.119101 TGCTTCCATTCTCTAGGACGAAC 60.119 47.826 0.00 0.00 32.62 3.95
198 199 3.096852 TGCTTCCATTCTCTAGGACGAA 58.903 45.455 0.00 0.00 32.62 3.85
199 200 2.427453 GTGCTTCCATTCTCTAGGACGA 59.573 50.000 0.00 0.00 32.62 4.20
200 201 2.428890 AGTGCTTCCATTCTCTAGGACG 59.571 50.000 0.00 0.00 34.62 4.79
201 202 4.402793 TGTAGTGCTTCCATTCTCTAGGAC 59.597 45.833 0.00 0.00 32.62 3.85
202 203 4.402793 GTGTAGTGCTTCCATTCTCTAGGA 59.597 45.833 0.00 0.00 0.00 2.94
203 204 4.404073 AGTGTAGTGCTTCCATTCTCTAGG 59.596 45.833 0.00 0.00 0.00 3.02
204 205 5.590530 AGTGTAGTGCTTCCATTCTCTAG 57.409 43.478 0.00 0.00 0.00 2.43
205 206 5.967088 GAAGTGTAGTGCTTCCATTCTCTA 58.033 41.667 0.00 0.00 37.08 2.43
206 207 4.826556 GAAGTGTAGTGCTTCCATTCTCT 58.173 43.478 0.00 0.00 37.08 3.10
243 245 2.027625 GTCGCGCAAAGTAGGCTGT 61.028 57.895 8.75 0.00 0.00 4.40
245 247 1.291877 CTTGTCGCGCAAAGTAGGCT 61.292 55.000 8.75 0.00 36.53 4.58
323 325 1.109920 ATCTCCCGTCCATCTCGGTG 61.110 60.000 3.78 0.00 45.63 4.94
384 386 5.480205 TGCCGTGTTATACATACAGTTTCA 58.520 37.500 0.00 0.00 0.00 2.69
443 467 5.690865 TGGAAATTATAGAGACCGGCATTT 58.309 37.500 0.00 0.00 0.00 2.32
473 499 7.251704 AGATAACAACTTCTGAACAACACAG 57.748 36.000 0.00 0.00 36.80 3.66
508 539 3.932710 TGCCGATGTCAGAAACAGAATAC 59.067 43.478 0.00 0.00 42.37 1.89
556 587 4.647399 AGATCACTACTTTACAGAGAGGGC 59.353 45.833 0.00 0.00 0.00 5.19
631 662 6.818142 GGTTTTTATTCTCATCCCCAATTGTG 59.182 38.462 4.43 0.00 0.00 3.33
638 669 3.384789 GCCTGGTTTTTATTCTCATCCCC 59.615 47.826 0.00 0.00 0.00 4.81
655 686 2.110967 CGATGCAGTTGGAGCCTGG 61.111 63.158 0.00 0.00 0.00 4.45
870 904 3.369385 GAACGAGAGAACGACTTGTCAA 58.631 45.455 0.00 0.00 37.03 3.18
1053 1692 1.899814 ACACTCAACGGCAAGAGGATA 59.100 47.619 0.00 0.00 36.20 2.59
1191 1851 0.762842 ATATGCCGAGGTACAGCCCA 60.763 55.000 0.00 0.00 38.26 5.36
1192 1852 0.320771 CATATGCCGAGGTACAGCCC 60.321 60.000 0.00 0.00 38.26 5.19
1309 1975 3.123804 CGTCGGATAGAACAAGATTGGG 58.876 50.000 0.00 0.00 0.00 4.12
1585 2260 2.825264 GCCGCCATAGGAGAAGCT 59.175 61.111 0.00 0.00 0.00 3.74
1829 2514 3.181467 GCTCTGTACTAGGTACTCTCCGA 60.181 52.174 8.89 0.00 41.75 4.55
1890 2575 2.522503 CATTCGGGGGATGGCCAT 59.477 61.111 20.96 20.96 35.15 4.40
1930 2615 0.318699 TCATCGCAGTAGCCGTATGC 60.319 55.000 0.00 0.00 41.71 3.14
1964 2649 2.640736 AAAACACTTGCACGTCGGCG 62.641 55.000 8.42 8.42 44.93 6.46
1993 2678 2.489275 CCACCGTGTTTGCTGGCTT 61.489 57.895 0.00 0.00 0.00 4.35
2248 2936 1.418908 AAGTCCCCAGACCACACCAG 61.419 60.000 0.00 0.00 44.72 4.00
2317 3005 1.445582 CCACGCCTACAAGTCGGAC 60.446 63.158 0.00 0.00 0.00 4.79
2332 3020 0.729116 CCAGATGATGTTGCGTCCAC 59.271 55.000 0.00 0.00 0.00 4.02
2412 3305 6.969993 TTGTTCCTTTACCTGCAAAATACT 57.030 33.333 0.00 0.00 0.00 2.12
2534 3490 3.858238 GGATTATCACGTAGCGGAATAGC 59.142 47.826 0.00 0.00 37.41 2.97
2674 3756 2.819019 ACATCGTTTGCAATGGATGTCA 59.181 40.909 27.23 0.31 44.42 3.58
2733 3815 9.986833 ACAAAAGTTGAACTTCATTTAATTTGC 57.013 25.926 11.44 0.00 37.47 3.68
2760 3842 0.808755 ATTTAAAGGCTTGACCGCGG 59.191 50.000 26.86 26.86 46.52 6.46
2762 3844 4.497507 GGTCATATTTAAAGGCTTGACCGC 60.498 45.833 14.55 0.00 46.52 5.68
2771 3853 6.757897 TGCAGACTTGGTCATATTTAAAGG 57.242 37.500 0.00 0.00 34.60 3.11
2852 3934 9.055248 CATCTAAAAGAGCAATTTAGTTTCGTG 57.945 33.333 12.64 5.51 39.96 4.35
2854 3936 9.612620 AACATCTAAAAGAGCAATTTAGTTTCG 57.387 29.630 12.64 0.00 39.96 3.46
2907 3989 9.274206 GTTTTGTCCTAAGTCAGAATTTAGAGT 57.726 33.333 0.00 0.00 28.68 3.24
2917 3999 8.889717 TGAAGTTTTAGTTTTGTCCTAAGTCAG 58.110 33.333 0.00 0.00 0.00 3.51
3005 4092 1.868498 TGAAACCACGAAACTTAGCCG 59.132 47.619 0.00 0.00 0.00 5.52
3017 4104 7.121315 AGGAGCTAAAACATTAGATGAAACCAC 59.879 37.037 0.00 0.00 0.00 4.16
3083 4170 3.430651 CCAAGAAAACTGCAGGCAGAAAA 60.431 43.478 26.63 0.00 46.30 2.29
3090 4177 4.391405 AAGAAACCAAGAAAACTGCAGG 57.609 40.909 19.93 0.00 0.00 4.85
3096 4183 5.109210 CCAGTCCAAAGAAACCAAGAAAAC 58.891 41.667 0.00 0.00 0.00 2.43
3100 4187 3.662759 ACCAGTCCAAAGAAACCAAGA 57.337 42.857 0.00 0.00 0.00 3.02
3103 4190 4.104102 AGTCATACCAGTCCAAAGAAACCA 59.896 41.667 0.00 0.00 0.00 3.67
3104 4191 4.652822 AGTCATACCAGTCCAAAGAAACC 58.347 43.478 0.00 0.00 0.00 3.27
3111 4198 6.440647 AGTTATGAGAAGTCATACCAGTCCAA 59.559 38.462 0.00 0.00 43.96 3.53
3122 4209 6.763135 GCCAATATGTCAGTTATGAGAAGTCA 59.237 38.462 0.00 0.00 35.66 3.41
3167 4254 8.375506 AGTTCAAGTAGAATATTCAAGTCCACA 58.624 33.333 17.56 0.00 38.76 4.17
3194 4284 9.638239 GAGTCTCATAGCTTTTATCCTAGAATG 57.362 37.037 0.00 0.00 0.00 2.67
3195 4285 8.811994 GGAGTCTCATAGCTTTTATCCTAGAAT 58.188 37.037 1.47 0.00 0.00 2.40
3214 4304 1.134670 CCATTGGAAGGTCGGAGTCTC 60.135 57.143 0.00 0.00 0.00 3.36
3222 4312 4.200092 GTGATCCTAACCATTGGAAGGTC 58.800 47.826 20.89 18.00 38.76 3.85
3239 4681 3.879892 GCTTCTTTATGGTGGAGGTGATC 59.120 47.826 0.00 0.00 0.00 2.92
3240 4682 3.525199 AGCTTCTTTATGGTGGAGGTGAT 59.475 43.478 0.00 0.00 0.00 3.06
3257 4699 3.558109 GGATATGCTCCAAGGGTAGCTTC 60.558 52.174 0.00 0.00 44.26 3.86
3259 4702 1.981495 GGATATGCTCCAAGGGTAGCT 59.019 52.381 0.00 0.00 44.26 3.32
3376 4831 4.556697 TGCTCCTCCCTAAACATATCTCA 58.443 43.478 0.00 0.00 0.00 3.27
3383 4838 4.335416 CAGAATTTGCTCCTCCCTAAACA 58.665 43.478 0.00 0.00 0.00 2.83
3423 4878 9.398921 ACCCCTAATAAGTATCTCAGATTCATT 57.601 33.333 0.00 0.00 0.00 2.57
3424 4879 8.980832 ACCCCTAATAAGTATCTCAGATTCAT 57.019 34.615 0.00 0.00 0.00 2.57
3545 5582 6.154363 GGAATTCATGTTCATGGGAAAGGTTA 59.846 38.462 7.93 0.00 34.13 2.85
3602 5639 5.065218 ACATGTTTCAGAGAAACTGTGTGTC 59.935 40.000 21.54 0.00 45.86 3.67
3739 5796 5.801531 ACCCCTGGAAAATTTGAAGTTAC 57.198 39.130 0.00 0.00 0.00 2.50
4198 6479 2.618709 CCAAAATCCGCTATCTTGGGTC 59.381 50.000 0.00 0.00 34.19 4.46
4258 6539 2.025418 CCGACAACACGCTGGGTAC 61.025 63.158 0.00 0.00 0.00 3.34
4265 6546 0.936297 ACTACGTTCCGACAACACGC 60.936 55.000 0.00 0.00 37.44 5.34
4738 7118 4.141367 TGGGTTCTCTTGGACACATAACAA 60.141 41.667 0.00 0.00 0.00 2.83
4962 7345 9.793252 ACATCTTTTGATAATATGTTCAACAGC 57.207 29.630 0.00 0.00 37.40 4.40
4994 7377 6.398234 TGTGTTACATAGCCATGTTGTTTT 57.602 33.333 2.32 0.00 42.98 2.43
5001 7384 5.355071 ACAACAGATGTGTTACATAGCCATG 59.645 40.000 8.06 0.00 45.57 3.66
5065 7449 3.959495 ATGAGGTGTATCAAGGCCAAT 57.041 42.857 5.01 0.00 31.76 3.16
5078 7462 3.664107 TCTCGTCTTCCAAAATGAGGTG 58.336 45.455 0.00 0.00 0.00 4.00
5085 7475 6.262193 ACTTGTTTTTCTCGTCTTCCAAAA 57.738 33.333 0.00 0.00 0.00 2.44
5098 7490 6.518736 GTCACCGAATCGATAACTTGTTTTTC 59.481 38.462 3.36 0.00 0.00 2.29
5109 7566 3.462982 CCAAATGGTCACCGAATCGATA 58.537 45.455 3.36 0.00 0.00 2.92
5124 7581 0.667993 ACAGCACGTTCCACCAAATG 59.332 50.000 0.00 0.00 0.00 2.32
5132 7589 2.417719 AGAGAAATGACAGCACGTTCC 58.582 47.619 0.00 0.00 0.00 3.62
5154 7612 3.557228 AAGCAAAGCAACCAAATGGAA 57.443 38.095 6.42 0.00 38.94 3.53
5158 7616 1.948834 GCCAAAGCAAAGCAACCAAAT 59.051 42.857 0.00 0.00 39.53 2.32
5200 7661 3.831911 AGGACTCTCTCTCCAAAAGACAG 59.168 47.826 0.00 0.00 0.00 3.51
5288 7751 3.071874 TGCTTATTTCCTGGACCTGTG 57.928 47.619 0.00 0.00 0.00 3.66
5372 7835 2.766828 GTGGGACTCCTGTAGCTTATGT 59.233 50.000 0.00 0.00 0.00 2.29
5390 7853 2.026641 CCCATTTGTATCAGCTGGTGG 58.973 52.381 15.13 2.48 0.00 4.61
5448 7911 4.523173 CCAAGTAACAGAGTACAGAGACCA 59.477 45.833 0.00 0.00 0.00 4.02
5449 7912 4.523558 ACCAAGTAACAGAGTACAGAGACC 59.476 45.833 0.00 0.00 0.00 3.85
5451 7914 7.828508 TTAACCAAGTAACAGAGTACAGAGA 57.171 36.000 0.00 0.00 0.00 3.10
5452 7915 8.088981 ACATTAACCAAGTAACAGAGTACAGAG 58.911 37.037 0.00 0.00 0.00 3.35
5467 9067 3.475242 CGCACACGTTACATTAACCAAG 58.525 45.455 0.00 0.00 35.27 3.61
5481 9081 0.232303 GTTGAGAGAAACCGCACACG 59.768 55.000 0.00 0.00 39.67 4.49
5505 9105 6.866248 GGCTTTTGCTGTTAGCTGTTTATTTA 59.134 34.615 0.00 0.00 46.54 1.40
5511 9111 2.310538 AGGCTTTTGCTGTTAGCTGTT 58.689 42.857 0.00 0.00 46.54 3.16
5518 9118 3.699038 TGTTCAGTTAGGCTTTTGCTGTT 59.301 39.130 0.00 0.00 46.54 3.16
5530 9130 7.164171 CAGTTCATCGTTTGTTTGTTCAGTTAG 59.836 37.037 0.00 0.00 0.00 2.34
5532 9132 5.799936 CAGTTCATCGTTTGTTTGTTCAGTT 59.200 36.000 0.00 0.00 0.00 3.16
5534 9134 5.568482 TCAGTTCATCGTTTGTTTGTTCAG 58.432 37.500 0.00 0.00 0.00 3.02
5564 9167 1.133976 GTACAATGATGGAGGCAGGCT 60.134 52.381 0.00 0.00 0.00 4.58
5565 9168 1.312815 GTACAATGATGGAGGCAGGC 58.687 55.000 0.00 0.00 0.00 4.85
5566 9169 2.092753 ACTGTACAATGATGGAGGCAGG 60.093 50.000 0.00 0.00 0.00 4.85
5572 9175 7.943079 AATGATCAAACTGTACAATGATGGA 57.057 32.000 18.13 8.81 32.90 3.41
5594 9197 9.045745 AGAGGAGAAAGAGAATACTGAGAAAAT 57.954 33.333 0.00 0.00 0.00 1.82
5610 9213 9.282569 CCTCATCCATTAAATAAGAGGAGAAAG 57.717 37.037 0.00 2.41 42.87 2.62
5611 9214 7.721399 GCCTCATCCATTAAATAAGAGGAGAAA 59.279 37.037 9.57 0.00 42.87 2.52
5612 9215 7.147320 TGCCTCATCCATTAAATAAGAGGAGAA 60.147 37.037 9.57 1.85 42.87 2.87
5613 9216 6.329986 TGCCTCATCCATTAAATAAGAGGAGA 59.670 38.462 9.57 0.00 42.87 3.71
5614 9217 6.537355 TGCCTCATCCATTAAATAAGAGGAG 58.463 40.000 9.57 9.14 42.87 3.69
5615 9218 6.514012 TGCCTCATCCATTAAATAAGAGGA 57.486 37.500 9.57 5.13 42.87 3.71
5616 9219 7.587037 TTTGCCTCATCCATTAAATAAGAGG 57.413 36.000 0.00 0.00 43.04 3.69
5618 9221 9.820725 CAAATTTGCCTCATCCATTAAATAAGA 57.179 29.630 5.01 0.00 0.00 2.10
5619 9222 9.603921 ACAAATTTGCCTCATCCATTAAATAAG 57.396 29.630 18.12 0.00 0.00 1.73
5620 9223 9.956640 AACAAATTTGCCTCATCCATTAAATAA 57.043 25.926 18.12 0.00 0.00 1.40
5622 9225 7.148205 GCAACAAATTTGCCTCATCCATTAAAT 60.148 33.333 18.12 0.00 39.38 1.40
5623 9226 6.149142 GCAACAAATTTGCCTCATCCATTAAA 59.851 34.615 18.12 0.00 39.38 1.52
5624 9227 5.642919 GCAACAAATTTGCCTCATCCATTAA 59.357 36.000 18.12 0.00 39.38 1.40
5625 9228 5.177326 GCAACAAATTTGCCTCATCCATTA 58.823 37.500 18.12 0.00 39.38 1.90
5626 9229 4.004982 GCAACAAATTTGCCTCATCCATT 58.995 39.130 18.12 0.00 39.38 3.16
5627 9230 3.602483 GCAACAAATTTGCCTCATCCAT 58.398 40.909 18.12 0.00 39.38 3.41
5628 9231 3.042871 GCAACAAATTTGCCTCATCCA 57.957 42.857 18.12 0.00 39.38 3.41
5636 9239 1.864565 AACGGAGGCAACAAATTTGC 58.135 45.000 18.12 5.02 44.22 3.68
5637 9240 2.470999 CGAAACGGAGGCAACAAATTTG 59.529 45.455 16.67 16.67 41.41 2.32
5638 9241 2.359531 TCGAAACGGAGGCAACAAATTT 59.640 40.909 0.00 0.00 41.41 1.82
5639 9242 1.950909 TCGAAACGGAGGCAACAAATT 59.049 42.857 0.00 0.00 41.41 1.82
5640 9243 1.600023 TCGAAACGGAGGCAACAAAT 58.400 45.000 0.00 0.00 41.41 2.32
5641 9244 1.380524 TTCGAAACGGAGGCAACAAA 58.619 45.000 0.00 0.00 41.41 2.83
5642 9245 1.380524 TTTCGAAACGGAGGCAACAA 58.619 45.000 6.47 0.00 41.41 2.83
5643 9246 1.380524 TTTTCGAAACGGAGGCAACA 58.619 45.000 10.79 0.00 41.41 3.33
5644 9247 2.478547 TTTTTCGAAACGGAGGCAAC 57.521 45.000 10.79 0.00 0.00 4.17
5876 9479 0.242825 TTTCTGAGATCGTTCGCGGT 59.757 50.000 6.13 0.00 41.70 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.