Multiple sequence alignment - TraesCS5D01G357100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G357100 chr5D 100.000 2315 0 0 1 2315 437867314 437869628 0.000000e+00 4276.0
1 TraesCS5D01G357100 chr5D 78.720 1109 193 34 151 1233 438438510 438437419 0.000000e+00 701.0
2 TraesCS5D01G357100 chr5D 75.588 1106 213 40 151 1230 438558762 438557688 5.750000e-136 494.0
3 TraesCS5D01G357100 chr5D 83.065 124 21 0 1020 1143 438564081 438563958 1.880000e-21 113.0
4 TraesCS5D01G357100 chr5D 75.598 209 43 5 1020 1225 438467133 438466930 1.890000e-16 97.1
5 TraesCS5D01G357100 chr5B 96.492 1511 50 3 1 1509 532239257 532240766 0.000000e+00 2494.0
6 TraesCS5D01G357100 chr5B 84.493 1322 175 14 1 1316 531817105 531818402 0.000000e+00 1279.0
7 TraesCS5D01G357100 chr5B 77.898 1113 201 34 151 1233 533035136 533034039 0.000000e+00 651.0
8 TraesCS5D01G357100 chr5B 76.362 1028 207 28 151 1168 533572748 533571747 9.480000e-144 520.0
9 TraesCS5D01G357100 chr5B 77.349 777 157 18 151 919 533018508 533017743 2.110000e-120 442.0
10 TraesCS5D01G357100 chr5B 97.561 41 1 0 1537 1577 532240820 532240860 1.150000e-08 71.3
11 TraesCS5D01G357100 chr7A 78.005 1173 227 27 125 1282 105512681 105513837 0.000000e+00 708.0
12 TraesCS5D01G357100 chr7A 78.442 937 168 23 1 926 105503966 105504879 4.290000e-162 580.0
13 TraesCS5D01G357100 chr7D 80.514 934 164 15 1 926 101732813 101733736 0.000000e+00 701.0
14 TraesCS5D01G357100 chr7B 80.064 933 160 18 1 925 59066492 59067406 0.000000e+00 669.0
15 TraesCS5D01G357100 chr7B 77.798 1126 216 32 98 1206 59072822 59073930 0.000000e+00 664.0
16 TraesCS5D01G357100 chr2A 77.367 1109 203 40 151 1233 14740371 14739285 4.230000e-172 614.0
17 TraesCS5D01G357100 chr2A 76.402 1123 205 45 151 1233 14703410 14702308 3.360000e-153 551.0
18 TraesCS5D01G357100 chr2A 79.193 793 141 18 134 915 14683356 14682577 1.580000e-146 529.0
19 TraesCS5D01G357100 chr2B 76.958 1111 205 43 151 1233 20146766 20147853 9.220000e-164 586.0
20 TraesCS5D01G357100 chr2B 76.411 1081 214 32 142 1200 65047756 65048817 1.560000e-151 545.0
21 TraesCS5D01G357100 chr2D 78.868 795 140 23 134 915 12626459 12625680 1.590000e-141 512.0
22 TraesCS5D01G357100 chr5A 76.684 772 160 17 151 915 554218378 554217620 5.950000e-111 411.0
23 TraesCS5D01G357100 chr5A 82.796 186 32 0 151 336 553491584 553491399 1.420000e-37 167.0
24 TraesCS5D01G357100 chr5A 89.394 66 7 0 1020 1085 554177413 554177348 1.470000e-12 84.2
25 TraesCS5D01G357100 chr3A 84.615 91 12 2 1846 1935 74780450 74780539 3.170000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G357100 chr5D 437867314 437869628 2314 False 4276.00 4276 100.0000 1 2315 1 chr5D.!!$F1 2314
1 TraesCS5D01G357100 chr5D 438437419 438438510 1091 True 701.00 701 78.7200 151 1233 1 chr5D.!!$R1 1082
2 TraesCS5D01G357100 chr5D 438557688 438558762 1074 True 494.00 494 75.5880 151 1230 1 chr5D.!!$R3 1079
3 TraesCS5D01G357100 chr5B 532239257 532240860 1603 False 1282.65 2494 97.0265 1 1577 2 chr5B.!!$F2 1576
4 TraesCS5D01G357100 chr5B 531817105 531818402 1297 False 1279.00 1279 84.4930 1 1316 1 chr5B.!!$F1 1315
5 TraesCS5D01G357100 chr5B 533034039 533035136 1097 True 651.00 651 77.8980 151 1233 1 chr5B.!!$R2 1082
6 TraesCS5D01G357100 chr5B 533571747 533572748 1001 True 520.00 520 76.3620 151 1168 1 chr5B.!!$R3 1017
7 TraesCS5D01G357100 chr5B 533017743 533018508 765 True 442.00 442 77.3490 151 919 1 chr5B.!!$R1 768
8 TraesCS5D01G357100 chr7A 105512681 105513837 1156 False 708.00 708 78.0050 125 1282 1 chr7A.!!$F2 1157
9 TraesCS5D01G357100 chr7A 105503966 105504879 913 False 580.00 580 78.4420 1 926 1 chr7A.!!$F1 925
10 TraesCS5D01G357100 chr7D 101732813 101733736 923 False 701.00 701 80.5140 1 926 1 chr7D.!!$F1 925
11 TraesCS5D01G357100 chr7B 59066492 59067406 914 False 669.00 669 80.0640 1 925 1 chr7B.!!$F1 924
12 TraesCS5D01G357100 chr7B 59072822 59073930 1108 False 664.00 664 77.7980 98 1206 1 chr7B.!!$F2 1108
13 TraesCS5D01G357100 chr2A 14739285 14740371 1086 True 614.00 614 77.3670 151 1233 1 chr2A.!!$R3 1082
14 TraesCS5D01G357100 chr2A 14702308 14703410 1102 True 551.00 551 76.4020 151 1233 1 chr2A.!!$R2 1082
15 TraesCS5D01G357100 chr2A 14682577 14683356 779 True 529.00 529 79.1930 134 915 1 chr2A.!!$R1 781
16 TraesCS5D01G357100 chr2B 20146766 20147853 1087 False 586.00 586 76.9580 151 1233 1 chr2B.!!$F1 1082
17 TraesCS5D01G357100 chr2B 65047756 65048817 1061 False 545.00 545 76.4110 142 1200 1 chr2B.!!$F2 1058
18 TraesCS5D01G357100 chr2D 12625680 12626459 779 True 512.00 512 78.8680 134 915 1 chr2D.!!$R1 781
19 TraesCS5D01G357100 chr5A 554217620 554218378 758 True 411.00 411 76.6840 151 915 1 chr5A.!!$R3 764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
509 528 1.475213 GGGGCTTCTTTATCTCCACCG 60.475 57.143 0.0 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1589 1678 0.251297 TTTCTCCCACCATGCCACTG 60.251 55.0 0.0 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 8.794335 AAATAGTTTCCTCTTATTCACTCCAC 57.206 34.615 0.00 0.00 0.00 4.02
129 130 9.527157 TGATGAACTAAAATTTATGAGTTCCCA 57.473 29.630 23.97 20.42 44.67 4.37
263 264 4.913335 TTGCAACACCGTAATTTGGTTA 57.087 36.364 0.00 0.00 37.72 2.85
509 528 1.475213 GGGGCTTCTTTATCTCCACCG 60.475 57.143 0.00 0.00 0.00 4.94
561 580 5.833131 AGACCTCAAAGCTGGAAATGTTTTA 59.167 36.000 0.00 0.00 0.00 1.52
643 662 4.486125 AACCAGGAAAATGCAAACACTT 57.514 36.364 0.00 0.00 0.00 3.16
1146 1209 3.112263 TCAGGAAAACCCGGATGATAGT 58.888 45.455 0.73 0.00 40.87 2.12
1316 1379 3.278574 CTGAAATAGATGGCCGGTGAAA 58.721 45.455 1.90 0.00 0.00 2.69
1326 1389 1.864082 GGCCGGTGAAACAATTTGTTG 59.136 47.619 15.17 3.50 40.14 3.33
1367 1430 0.668096 TGTGTGCGTTCGGTGGATAC 60.668 55.000 0.00 0.00 0.00 2.24
1371 1434 1.066918 GCGTTCGGTGGATACGGAT 59.933 57.895 0.00 0.00 36.25 4.18
1419 1482 7.193595 ACAAAATAAAGTCTTGACCGACAAAG 58.806 34.615 0.00 0.00 38.08 2.77
1436 1499 3.068024 ACAAAGTGGTCGTGCATCATTTT 59.932 39.130 0.00 0.00 0.00 1.82
1517 1580 8.457238 AGAAAATCTTAGGATCCAGTTATTGC 57.543 34.615 15.82 0.39 0.00 3.56
1519 1582 8.593945 AAAATCTTAGGATCCAGTTATTGCAA 57.406 30.769 15.82 0.00 0.00 4.08
1520 1583 7.573968 AATCTTAGGATCCAGTTATTGCAAC 57.426 36.000 15.82 0.00 0.00 4.17
1522 1585 6.721318 TCTTAGGATCCAGTTATTGCAACTT 58.279 36.000 15.82 0.00 0.00 2.66
1523 1586 7.857456 TCTTAGGATCCAGTTATTGCAACTTA 58.143 34.615 15.82 0.00 0.00 2.24
1528 1591 6.806739 GGATCCAGTTATTGCAACTTAAACAC 59.193 38.462 6.95 0.00 0.00 3.32
1529 1592 6.952773 TCCAGTTATTGCAACTTAAACACT 57.047 33.333 0.00 0.00 0.00 3.55
1530 1593 8.630054 ATCCAGTTATTGCAACTTAAACACTA 57.370 30.769 0.00 0.00 0.00 2.74
1531 1594 7.867752 TCCAGTTATTGCAACTTAAACACTAC 58.132 34.615 0.00 0.00 0.00 2.73
1532 1595 7.499563 TCCAGTTATTGCAACTTAAACACTACA 59.500 33.333 0.00 0.00 0.00 2.74
1533 1596 8.296713 CCAGTTATTGCAACTTAAACACTACAT 58.703 33.333 0.00 0.00 0.00 2.29
1535 1598 7.807907 AGTTATTGCAACTTAAACACTACATGC 59.192 33.333 0.00 0.00 0.00 4.06
1548 1637 2.292267 CTACATGCTGTGACCCCATTC 58.708 52.381 0.00 0.00 0.00 2.67
1577 1666 9.075519 CCATTATTGCAACTTAAACACTACATG 57.924 33.333 0.00 0.00 0.00 3.21
1578 1667 8.586273 CATTATTGCAACTTAAACACTACATGC 58.414 33.333 0.00 0.00 0.00 4.06
1579 1668 5.766150 TTGCAACTTAAACACTACATGCT 57.234 34.783 0.00 0.00 33.87 3.79
1580 1669 5.107109 TGCAACTTAAACACTACATGCTG 57.893 39.130 0.00 0.00 33.87 4.41
1581 1670 4.819088 TGCAACTTAAACACTACATGCTGA 59.181 37.500 0.00 0.00 33.87 4.26
1582 1671 5.298026 TGCAACTTAAACACTACATGCTGAA 59.702 36.000 0.00 0.00 33.87 3.02
1583 1672 6.183360 TGCAACTTAAACACTACATGCTGAAA 60.183 34.615 0.00 0.00 33.87 2.69
1584 1673 6.695278 GCAACTTAAACACTACATGCTGAAAA 59.305 34.615 0.00 0.00 0.00 2.29
1585 1674 7.221838 GCAACTTAAACACTACATGCTGAAAAA 59.778 33.333 0.00 0.00 0.00 1.94
1586 1675 9.248291 CAACTTAAACACTACATGCTGAAAAAT 57.752 29.630 0.00 0.00 0.00 1.82
1587 1676 9.816354 AACTTAAACACTACATGCTGAAAAATT 57.184 25.926 0.00 0.00 0.00 1.82
1588 1677 9.248291 ACTTAAACACTACATGCTGAAAAATTG 57.752 29.630 0.00 0.00 0.00 2.32
1589 1678 6.529463 AAACACTACATGCTGAAAAATTGC 57.471 33.333 0.00 0.00 0.00 3.56
1590 1679 5.199024 ACACTACATGCTGAAAAATTGCA 57.801 34.783 0.00 0.00 41.13 4.08
1591 1680 5.224888 ACACTACATGCTGAAAAATTGCAG 58.775 37.500 0.00 0.00 40.18 4.41
1592 1681 5.221303 ACACTACATGCTGAAAAATTGCAGT 60.221 36.000 3.18 0.00 40.18 4.40
1593 1682 5.118050 CACTACATGCTGAAAAATTGCAGTG 59.882 40.000 3.18 0.00 40.18 3.66
1594 1683 3.395639 ACATGCTGAAAAATTGCAGTGG 58.604 40.909 3.18 0.00 40.18 4.00
1595 1684 1.868469 TGCTGAAAAATTGCAGTGGC 58.132 45.000 3.18 0.00 41.68 5.01
1605 1694 2.753043 GCAGTGGCATGGTGGGAG 60.753 66.667 0.00 0.00 40.72 4.30
1606 1695 3.080641 CAGTGGCATGGTGGGAGA 58.919 61.111 0.00 0.00 0.00 3.71
1607 1696 1.379916 CAGTGGCATGGTGGGAGAA 59.620 57.895 0.00 0.00 0.00 2.87
1608 1697 0.251297 CAGTGGCATGGTGGGAGAAA 60.251 55.000 0.00 0.00 0.00 2.52
1609 1698 0.482446 AGTGGCATGGTGGGAGAAAA 59.518 50.000 0.00 0.00 0.00 2.29
1610 1699 1.077663 AGTGGCATGGTGGGAGAAAAT 59.922 47.619 0.00 0.00 0.00 1.82
1611 1700 2.311542 AGTGGCATGGTGGGAGAAAATA 59.688 45.455 0.00 0.00 0.00 1.40
1612 1701 2.427095 GTGGCATGGTGGGAGAAAATAC 59.573 50.000 0.00 0.00 0.00 1.89
1613 1702 2.042297 TGGCATGGTGGGAGAAAATACA 59.958 45.455 0.00 0.00 0.00 2.29
1614 1703 2.427095 GGCATGGTGGGAGAAAATACAC 59.573 50.000 0.00 0.00 0.00 2.90
1615 1704 3.088532 GCATGGTGGGAGAAAATACACA 58.911 45.455 0.00 0.00 35.62 3.72
1616 1705 3.701040 GCATGGTGGGAGAAAATACACAT 59.299 43.478 0.00 0.00 35.62 3.21
1617 1706 4.440525 GCATGGTGGGAGAAAATACACATG 60.441 45.833 0.00 0.00 35.62 3.21
1618 1707 3.088532 TGGTGGGAGAAAATACACATGC 58.911 45.455 0.00 0.00 35.62 4.06
1619 1708 3.088532 GGTGGGAGAAAATACACATGCA 58.911 45.455 0.00 0.00 35.62 3.96
1620 1709 3.701040 GGTGGGAGAAAATACACATGCAT 59.299 43.478 0.00 0.00 35.62 3.96
1621 1710 4.202050 GGTGGGAGAAAATACACATGCATC 60.202 45.833 0.00 0.00 35.62 3.91
1622 1711 3.627123 TGGGAGAAAATACACATGCATCG 59.373 43.478 0.00 0.00 0.00 3.84
1623 1712 3.876914 GGGAGAAAATACACATGCATCGA 59.123 43.478 0.00 0.00 0.00 3.59
1624 1713 4.516698 GGGAGAAAATACACATGCATCGAT 59.483 41.667 0.00 0.00 0.00 3.59
1625 1714 5.446709 GGAGAAAATACACATGCATCGATG 58.553 41.667 21.27 21.27 0.00 3.84
1626 1715 5.008019 GGAGAAAATACACATGCATCGATGT 59.992 40.000 25.47 9.68 37.01 3.06
1627 1716 6.441093 AGAAAATACACATGCATCGATGTT 57.559 33.333 25.47 11.72 34.18 2.71
1628 1717 6.260377 AGAAAATACACATGCATCGATGTTG 58.740 36.000 25.47 23.17 34.18 3.33
1629 1718 4.556942 AATACACATGCATCGATGTTGG 57.443 40.909 25.47 16.75 34.18 3.77
1630 1719 1.825090 ACACATGCATCGATGTTGGT 58.175 45.000 25.47 17.34 34.18 3.67
1631 1720 1.469703 ACACATGCATCGATGTTGGTG 59.530 47.619 27.96 27.96 34.18 4.17
1632 1721 1.469703 CACATGCATCGATGTTGGTGT 59.530 47.619 25.47 19.92 34.18 4.16
1633 1722 2.677337 CACATGCATCGATGTTGGTGTA 59.323 45.455 25.47 0.67 34.18 2.90
1634 1723 3.313249 CACATGCATCGATGTTGGTGTAT 59.687 43.478 25.47 3.25 34.18 2.29
1635 1724 3.561310 ACATGCATCGATGTTGGTGTATC 59.439 43.478 25.47 7.05 32.38 2.24
1636 1725 3.258971 TGCATCGATGTTGGTGTATCA 57.741 42.857 25.47 9.55 0.00 2.15
1637 1726 3.197265 TGCATCGATGTTGGTGTATCAG 58.803 45.455 25.47 0.00 0.00 2.90
1638 1727 3.198068 GCATCGATGTTGGTGTATCAGT 58.802 45.455 25.47 0.00 0.00 3.41
1639 1728 4.142049 TGCATCGATGTTGGTGTATCAGTA 60.142 41.667 25.47 0.00 0.00 2.74
1640 1729 4.445718 GCATCGATGTTGGTGTATCAGTAG 59.554 45.833 25.47 0.00 0.00 2.57
1641 1730 5.592054 CATCGATGTTGGTGTATCAGTAGT 58.408 41.667 17.50 0.00 0.00 2.73
1642 1731 5.654603 TCGATGTTGGTGTATCAGTAGTT 57.345 39.130 0.00 0.00 0.00 2.24
1643 1732 6.032956 TCGATGTTGGTGTATCAGTAGTTT 57.967 37.500 0.00 0.00 0.00 2.66
1644 1733 6.460781 TCGATGTTGGTGTATCAGTAGTTTT 58.539 36.000 0.00 0.00 0.00 2.43
1645 1734 6.588756 TCGATGTTGGTGTATCAGTAGTTTTC 59.411 38.462 0.00 0.00 0.00 2.29
1646 1735 6.590292 CGATGTTGGTGTATCAGTAGTTTTCT 59.410 38.462 0.00 0.00 0.00 2.52
1647 1736 7.201444 CGATGTTGGTGTATCAGTAGTTTTCTC 60.201 40.741 0.00 0.00 0.00 2.87
1648 1737 6.228258 TGTTGGTGTATCAGTAGTTTTCTCC 58.772 40.000 0.00 0.00 0.00 3.71
1649 1738 6.042781 TGTTGGTGTATCAGTAGTTTTCTCCT 59.957 38.462 0.00 0.00 0.00 3.69
1650 1739 6.681729 TGGTGTATCAGTAGTTTTCTCCTT 57.318 37.500 0.00 0.00 0.00 3.36
1651 1740 7.074653 TGGTGTATCAGTAGTTTTCTCCTTT 57.925 36.000 0.00 0.00 0.00 3.11
1652 1741 8.197592 TGGTGTATCAGTAGTTTTCTCCTTTA 57.802 34.615 0.00 0.00 0.00 1.85
1653 1742 8.653191 TGGTGTATCAGTAGTTTTCTCCTTTAA 58.347 33.333 0.00 0.00 0.00 1.52
1654 1743 9.498176 GGTGTATCAGTAGTTTTCTCCTTTAAA 57.502 33.333 0.00 0.00 0.00 1.52
1678 1767 9.674824 AAATTATACTAGTAGTCACGTATGTGC 57.325 33.333 5.96 5.87 46.01 4.57
1679 1768 7.790823 TTATACTAGTAGTCACGTATGTGCA 57.209 36.000 5.96 0.00 46.01 4.57
1680 1769 4.352600 ACTAGTAGTCACGTATGTGCAC 57.647 45.455 10.75 10.75 46.01 4.57
1681 1770 2.257974 AGTAGTCACGTATGTGCACG 57.742 50.000 13.13 2.13 46.01 5.34
1682 1771 1.808343 AGTAGTCACGTATGTGCACGA 59.192 47.619 13.13 0.00 46.01 4.35
1683 1772 2.227149 AGTAGTCACGTATGTGCACGAA 59.773 45.455 13.13 0.00 46.01 3.85
1684 1773 2.143008 AGTCACGTATGTGCACGAAA 57.857 45.000 13.13 0.00 46.01 3.46
1685 1774 2.683968 AGTCACGTATGTGCACGAAAT 58.316 42.857 13.13 2.64 46.01 2.17
1686 1775 2.411748 AGTCACGTATGTGCACGAAATG 59.588 45.455 13.13 7.88 46.01 2.32
1687 1776 2.156891 GTCACGTATGTGCACGAAATGT 59.843 45.455 13.13 8.52 46.01 2.71
1688 1777 2.410392 TCACGTATGTGCACGAAATGTC 59.590 45.455 13.13 0.00 46.01 3.06
1689 1778 1.730064 ACGTATGTGCACGAAATGTCC 59.270 47.619 13.13 0.00 44.69 4.02
1690 1779 1.729517 CGTATGTGCACGAAATGTCCA 59.270 47.619 13.13 0.00 44.69 4.02
1691 1780 2.222796 CGTATGTGCACGAAATGTCCAG 60.223 50.000 13.13 0.00 44.69 3.86
1692 1781 1.896220 ATGTGCACGAAATGTCCAGT 58.104 45.000 13.13 0.00 0.00 4.00
1693 1782 1.674359 TGTGCACGAAATGTCCAGTT 58.326 45.000 13.13 0.00 0.00 3.16
1694 1783 2.020720 TGTGCACGAAATGTCCAGTTT 58.979 42.857 13.13 0.00 0.00 2.66
1695 1784 2.223456 TGTGCACGAAATGTCCAGTTTG 60.223 45.455 13.13 0.00 0.00 2.93
1696 1785 1.336440 TGCACGAAATGTCCAGTTTGG 59.664 47.619 0.00 0.00 39.43 3.28
1697 1786 1.930371 GCACGAAATGTCCAGTTTGGC 60.930 52.381 0.00 0.00 37.47 4.52
1698 1787 1.336440 CACGAAATGTCCAGTTTGGCA 59.664 47.619 0.00 0.00 37.47 4.92
1699 1788 1.608590 ACGAAATGTCCAGTTTGGCAG 59.391 47.619 0.00 0.00 37.47 4.85
1700 1789 1.608590 CGAAATGTCCAGTTTGGCAGT 59.391 47.619 0.00 0.00 37.47 4.40
1701 1790 2.811431 CGAAATGTCCAGTTTGGCAGTA 59.189 45.455 0.00 0.00 37.47 2.74
1702 1791 3.252215 CGAAATGTCCAGTTTGGCAGTAA 59.748 43.478 0.00 0.00 37.47 2.24
1703 1792 4.082787 CGAAATGTCCAGTTTGGCAGTAAT 60.083 41.667 0.00 0.00 37.47 1.89
1704 1793 5.123186 CGAAATGTCCAGTTTGGCAGTAATA 59.877 40.000 0.00 0.00 37.47 0.98
1705 1794 6.183360 CGAAATGTCCAGTTTGGCAGTAATAT 60.183 38.462 0.00 0.00 37.47 1.28
1706 1795 7.480760 AAATGTCCAGTTTGGCAGTAATATT 57.519 32.000 0.00 0.00 37.47 1.28
1707 1796 8.588290 AAATGTCCAGTTTGGCAGTAATATTA 57.412 30.769 0.00 0.00 37.47 0.98
1708 1797 8.766994 AATGTCCAGTTTGGCAGTAATATTAT 57.233 30.769 0.00 0.00 37.47 1.28
1709 1798 8.766994 ATGTCCAGTTTGGCAGTAATATTATT 57.233 30.769 0.00 0.00 37.47 1.40
1710 1799 8.588290 TGTCCAGTTTGGCAGTAATATTATTT 57.412 30.769 0.00 0.00 37.47 1.40
1711 1800 8.682710 TGTCCAGTTTGGCAGTAATATTATTTC 58.317 33.333 0.00 0.00 37.47 2.17
1712 1801 7.855904 GTCCAGTTTGGCAGTAATATTATTTCG 59.144 37.037 0.00 0.00 37.47 3.46
1713 1802 7.771361 TCCAGTTTGGCAGTAATATTATTTCGA 59.229 33.333 0.00 0.00 37.47 3.71
1714 1803 8.402472 CCAGTTTGGCAGTAATATTATTTCGAA 58.598 33.333 0.00 0.00 0.00 3.71
1715 1804 9.438291 CAGTTTGGCAGTAATATTATTTCGAAG 57.562 33.333 0.00 0.00 0.00 3.79
1716 1805 9.391006 AGTTTGGCAGTAATATTATTTCGAAGA 57.609 29.630 0.00 0.00 0.00 2.87
1816 1905 8.489990 CCAAATAATGGTTTATGCAATCAACA 57.510 30.769 0.00 0.00 44.85 3.33
1817 1906 9.111613 CCAAATAATGGTTTATGCAATCAACAT 57.888 29.630 0.00 0.00 44.85 2.71
1824 1913 9.887629 ATGGTTTATGCAATCAACATATTTTGA 57.112 25.926 6.75 6.75 39.79 2.69
1825 1914 9.716531 TGGTTTATGCAATCAACATATTTTGAA 57.283 25.926 8.31 0.00 38.95 2.69
1845 1934 9.654663 TTTTGAAATTATTGATGATGTGATGCA 57.345 25.926 0.00 0.00 0.00 3.96
1846 1935 9.825109 TTTGAAATTATTGATGATGTGATGCAT 57.175 25.926 0.00 0.00 41.24 3.96
1848 1937 9.902196 TGAAATTATTGATGATGTGATGCATAC 57.098 29.630 0.00 0.00 38.06 2.39
1849 1938 9.902196 GAAATTATTGATGATGTGATGCATACA 57.098 29.630 0.00 5.31 38.06 2.29
1850 1939 9.687210 AAATTATTGATGATGTGATGCATACAC 57.313 29.630 17.28 17.28 38.06 2.90
1851 1940 5.700722 ATTGATGATGTGATGCATACACC 57.299 39.130 19.76 9.25 38.06 4.16
1852 1941 4.153673 TGATGATGTGATGCATACACCA 57.846 40.909 19.76 13.42 38.06 4.17
1853 1942 4.721132 TGATGATGTGATGCATACACCAT 58.279 39.130 19.76 16.50 38.06 3.55
1854 1943 5.134661 TGATGATGTGATGCATACACCATT 58.865 37.500 19.76 9.77 38.06 3.16
1855 1944 4.904253 TGATGTGATGCATACACCATTG 57.096 40.909 19.76 0.00 38.06 2.82
1856 1945 3.633065 TGATGTGATGCATACACCATTGG 59.367 43.478 19.76 0.00 38.06 3.16
1857 1946 3.362870 TGTGATGCATACACCATTGGA 57.637 42.857 19.76 4.60 37.45 3.53
1858 1947 3.281158 TGTGATGCATACACCATTGGAG 58.719 45.455 19.76 3.76 37.45 3.86
1859 1948 2.033801 GTGATGCATACACCATTGGAGC 59.966 50.000 10.37 5.88 32.84 4.70
1860 1949 2.300433 GATGCATACACCATTGGAGCA 58.700 47.619 10.37 11.12 34.01 4.26
1861 1950 2.212812 TGCATACACCATTGGAGCAA 57.787 45.000 10.37 0.00 0.00 3.91
1862 1951 2.737544 TGCATACACCATTGGAGCAAT 58.262 42.857 10.37 0.00 34.04 3.56
1863 1952 3.895998 TGCATACACCATTGGAGCAATA 58.104 40.909 10.37 0.00 32.35 1.90
1864 1953 4.472496 TGCATACACCATTGGAGCAATAT 58.528 39.130 10.37 0.00 32.35 1.28
1865 1954 4.520111 TGCATACACCATTGGAGCAATATC 59.480 41.667 10.37 0.00 32.35 1.63
1866 1955 4.520111 GCATACACCATTGGAGCAATATCA 59.480 41.667 10.37 0.00 32.35 2.15
1867 1956 5.335426 GCATACACCATTGGAGCAATATCAG 60.335 44.000 10.37 0.00 32.35 2.90
1868 1957 4.508551 ACACCATTGGAGCAATATCAGA 57.491 40.909 10.37 0.00 32.35 3.27
1869 1958 5.057843 ACACCATTGGAGCAATATCAGAT 57.942 39.130 10.37 0.00 32.35 2.90
1870 1959 4.825634 ACACCATTGGAGCAATATCAGATG 59.174 41.667 10.37 0.00 32.35 2.90
1871 1960 4.825634 CACCATTGGAGCAATATCAGATGT 59.174 41.667 10.37 0.00 32.35 3.06
1872 1961 5.301045 CACCATTGGAGCAATATCAGATGTT 59.699 40.000 10.37 0.00 32.35 2.71
1873 1962 5.301045 ACCATTGGAGCAATATCAGATGTTG 59.699 40.000 10.37 14.11 32.35 3.33
1874 1963 5.278808 CCATTGGAGCAATATCAGATGTTGG 60.279 44.000 18.61 3.45 32.35 3.77
1875 1964 4.776435 TGGAGCAATATCAGATGTTGGA 57.224 40.909 18.61 0.00 32.72 3.53
1876 1965 5.314718 TGGAGCAATATCAGATGTTGGAT 57.685 39.130 18.61 1.96 32.72 3.41
1877 1966 6.438186 TGGAGCAATATCAGATGTTGGATA 57.562 37.500 18.61 0.00 32.72 2.59
1878 1967 7.024345 TGGAGCAATATCAGATGTTGGATAT 57.976 36.000 18.61 0.00 38.12 1.63
1879 1968 8.149631 TGGAGCAATATCAGATGTTGGATATA 57.850 34.615 18.61 0.00 36.07 0.86
1880 1969 8.262933 TGGAGCAATATCAGATGTTGGATATAG 58.737 37.037 18.61 0.00 36.07 1.31
1881 1970 7.714377 GGAGCAATATCAGATGTTGGATATAGG 59.286 40.741 18.61 0.00 36.07 2.57
1882 1971 8.155620 AGCAATATCAGATGTTGGATATAGGT 57.844 34.615 18.61 0.00 36.07 3.08
1883 1972 9.271921 AGCAATATCAGATGTTGGATATAGGTA 57.728 33.333 18.61 0.00 36.07 3.08
1884 1973 9.890629 GCAATATCAGATGTTGGATATAGGTAA 57.109 33.333 18.61 0.00 36.07 2.85
1889 1978 8.504811 TCAGATGTTGGATATAGGTAATTGGA 57.495 34.615 0.00 0.00 0.00 3.53
1890 1979 9.116080 TCAGATGTTGGATATAGGTAATTGGAT 57.884 33.333 0.00 0.00 0.00 3.41
1891 1980 9.170734 CAGATGTTGGATATAGGTAATTGGATG 57.829 37.037 0.00 0.00 0.00 3.51
1892 1981 8.331740 AGATGTTGGATATAGGTAATTGGATGG 58.668 37.037 0.00 0.00 0.00 3.51
1893 1982 6.245408 TGTTGGATATAGGTAATTGGATGGC 58.755 40.000 0.00 0.00 0.00 4.40
1894 1983 5.450818 TGGATATAGGTAATTGGATGGCC 57.549 43.478 0.00 0.00 0.00 5.36
1895 1984 4.229582 TGGATATAGGTAATTGGATGGCCC 59.770 45.833 0.00 0.00 0.00 5.80
1896 1985 4.229582 GGATATAGGTAATTGGATGGCCCA 59.770 45.833 0.00 0.00 44.93 5.36
1905 1994 2.369983 TGGATGGCCCAGATCATTTC 57.630 50.000 0.00 0.00 40.82 2.17
1906 1995 1.242076 GGATGGCCCAGATCATTTCG 58.758 55.000 0.00 0.00 34.14 3.46
1907 1996 1.202806 GGATGGCCCAGATCATTTCGA 60.203 52.381 0.00 0.00 34.14 3.71
1908 1997 2.553904 GGATGGCCCAGATCATTTCGAT 60.554 50.000 0.00 0.00 33.68 3.59
1909 1998 2.734755 TGGCCCAGATCATTTCGATT 57.265 45.000 0.00 0.00 33.17 3.34
1910 1999 2.575532 TGGCCCAGATCATTTCGATTC 58.424 47.619 0.00 0.00 33.17 2.52
1911 2000 2.092484 TGGCCCAGATCATTTCGATTCA 60.092 45.455 0.00 0.00 33.17 2.57
1912 2001 3.152341 GGCCCAGATCATTTCGATTCAT 58.848 45.455 0.00 0.00 33.17 2.57
1913 2002 3.190118 GGCCCAGATCATTTCGATTCATC 59.810 47.826 0.00 0.00 33.17 2.92
1914 2003 3.817084 GCCCAGATCATTTCGATTCATCA 59.183 43.478 0.00 0.00 33.17 3.07
1915 2004 4.276678 GCCCAGATCATTTCGATTCATCAA 59.723 41.667 0.00 0.00 33.17 2.57
1916 2005 5.221106 GCCCAGATCATTTCGATTCATCAAA 60.221 40.000 0.00 0.00 33.17 2.69
1917 2006 6.204359 CCCAGATCATTTCGATTCATCAAAC 58.796 40.000 0.00 0.00 33.17 2.93
1918 2007 6.039047 CCCAGATCATTTCGATTCATCAAACT 59.961 38.462 0.00 0.00 33.17 2.66
1919 2008 7.130917 CCAGATCATTTCGATTCATCAAACTC 58.869 38.462 0.00 0.00 33.17 3.01
1920 2009 6.844779 CAGATCATTTCGATTCATCAAACTCG 59.155 38.462 0.00 0.00 33.17 4.18
1921 2010 6.536582 AGATCATTTCGATTCATCAAACTCGT 59.463 34.615 0.00 0.00 33.17 4.18
1922 2011 5.857394 TCATTTCGATTCATCAAACTCGTG 58.143 37.500 0.00 0.00 33.10 4.35
1923 2012 3.722555 TTCGATTCATCAAACTCGTGC 57.277 42.857 0.00 0.00 33.10 5.34
1924 2013 2.959516 TCGATTCATCAAACTCGTGCT 58.040 42.857 0.00 0.00 33.10 4.40
1925 2014 3.325870 TCGATTCATCAAACTCGTGCTT 58.674 40.909 0.00 0.00 33.10 3.91
1926 2015 3.745975 TCGATTCATCAAACTCGTGCTTT 59.254 39.130 0.00 0.00 33.10 3.51
1927 2016 4.213270 TCGATTCATCAAACTCGTGCTTTT 59.787 37.500 0.00 0.00 33.10 2.27
1928 2017 5.407084 TCGATTCATCAAACTCGTGCTTTTA 59.593 36.000 0.00 0.00 33.10 1.52
1929 2018 6.092122 TCGATTCATCAAACTCGTGCTTTTAT 59.908 34.615 0.00 0.00 33.10 1.40
1930 2019 7.276878 TCGATTCATCAAACTCGTGCTTTTATA 59.723 33.333 0.00 0.00 33.10 0.98
1931 2020 7.902917 CGATTCATCAAACTCGTGCTTTTATAA 59.097 33.333 0.00 0.00 0.00 0.98
1932 2021 9.214953 GATTCATCAAACTCGTGCTTTTATAAG 57.785 33.333 0.00 0.00 34.36 1.73
1933 2022 7.667043 TCATCAAACTCGTGCTTTTATAAGT 57.333 32.000 0.00 0.00 33.74 2.24
1934 2023 8.766000 TCATCAAACTCGTGCTTTTATAAGTA 57.234 30.769 0.00 0.00 33.74 2.24
1935 2024 8.869897 TCATCAAACTCGTGCTTTTATAAGTAG 58.130 33.333 0.00 0.00 33.74 2.57
1936 2025 8.656849 CATCAAACTCGTGCTTTTATAAGTAGT 58.343 33.333 0.00 0.00 33.74 2.73
1937 2026 8.014322 TCAAACTCGTGCTTTTATAAGTAGTG 57.986 34.615 0.00 0.00 33.74 2.74
1938 2027 6.963049 AACTCGTGCTTTTATAAGTAGTGG 57.037 37.500 0.00 0.00 33.74 4.00
1939 2028 6.034161 ACTCGTGCTTTTATAAGTAGTGGT 57.966 37.500 0.00 0.00 33.74 4.16
1940 2029 7.161773 ACTCGTGCTTTTATAAGTAGTGGTA 57.838 36.000 0.00 0.00 33.74 3.25
1941 2030 7.256286 ACTCGTGCTTTTATAAGTAGTGGTAG 58.744 38.462 0.00 0.00 33.74 3.18
1942 2031 7.121759 ACTCGTGCTTTTATAAGTAGTGGTAGA 59.878 37.037 0.00 0.00 33.74 2.59
1943 2032 8.004087 TCGTGCTTTTATAAGTAGTGGTAGAT 57.996 34.615 0.00 0.00 33.74 1.98
1944 2033 8.472413 TCGTGCTTTTATAAGTAGTGGTAGATT 58.528 33.333 0.00 0.00 33.74 2.40
1945 2034 8.540492 CGTGCTTTTATAAGTAGTGGTAGATTG 58.460 37.037 0.00 0.00 33.74 2.67
1946 2035 9.379791 GTGCTTTTATAAGTAGTGGTAGATTGT 57.620 33.333 0.00 0.00 33.74 2.71
1956 2045 9.708092 AAGTAGTGGTAGATTGTAGTTTTCTTC 57.292 33.333 0.00 0.00 0.00 2.87
1957 2046 9.091220 AGTAGTGGTAGATTGTAGTTTTCTTCT 57.909 33.333 0.00 0.00 0.00 2.85
1958 2047 9.708092 GTAGTGGTAGATTGTAGTTTTCTTCTT 57.292 33.333 0.00 0.00 0.00 2.52
1959 2048 8.608844 AGTGGTAGATTGTAGTTTTCTTCTTG 57.391 34.615 0.00 0.00 0.00 3.02
1960 2049 8.429641 AGTGGTAGATTGTAGTTTTCTTCTTGA 58.570 33.333 0.00 0.00 0.00 3.02
1961 2050 9.052759 GTGGTAGATTGTAGTTTTCTTCTTGAA 57.947 33.333 0.00 0.00 0.00 2.69
1962 2051 9.621629 TGGTAGATTGTAGTTTTCTTCTTGAAA 57.378 29.630 0.00 0.00 42.33 2.69
1984 2073 9.892130 TGAAAAAGAGATATAAGTTTCCTCTCC 57.108 33.333 0.00 0.00 34.26 3.71
1986 2075 9.898152 AAAAAGAGATATAAGTTTCCTCTCCTG 57.102 33.333 0.00 0.00 34.26 3.86
1987 2076 8.846423 AAAGAGATATAAGTTTCCTCTCCTGA 57.154 34.615 0.00 0.00 34.26 3.86
1988 2077 9.445973 AAAGAGATATAAGTTTCCTCTCCTGAT 57.554 33.333 0.00 0.00 34.26 2.90
1989 2078 8.421249 AGAGATATAAGTTTCCTCTCCTGATG 57.579 38.462 0.00 0.00 34.26 3.07
1990 2079 8.010105 AGAGATATAAGTTTCCTCTCCTGATGT 58.990 37.037 0.00 0.00 34.26 3.06
1991 2080 8.560124 AGATATAAGTTTCCTCTCCTGATGTT 57.440 34.615 0.00 0.00 0.00 2.71
1992 2081 9.661954 AGATATAAGTTTCCTCTCCTGATGTTA 57.338 33.333 0.00 0.00 0.00 2.41
1996 2085 7.929941 AAGTTTCCTCTCCTGATGTTATTTC 57.070 36.000 0.00 0.00 0.00 2.17
1997 2086 7.020827 AGTTTCCTCTCCTGATGTTATTTCA 57.979 36.000 0.00 0.00 0.00 2.69
1998 2087 7.461749 AGTTTCCTCTCCTGATGTTATTTCAA 58.538 34.615 0.00 0.00 0.00 2.69
1999 2088 7.944554 AGTTTCCTCTCCTGATGTTATTTCAAA 59.055 33.333 0.00 0.00 0.00 2.69
2000 2089 8.576442 GTTTCCTCTCCTGATGTTATTTCAAAA 58.424 33.333 0.00 0.00 0.00 2.44
2001 2090 8.704849 TTCCTCTCCTGATGTTATTTCAAAAA 57.295 30.769 0.00 0.00 0.00 1.94
2022 2111 6.751514 AAAATGTTCTTGTTTTTGGAACCC 57.248 33.333 0.00 0.00 38.68 4.11
2023 2112 5.428184 AATGTTCTTGTTTTTGGAACCCA 57.572 34.783 0.00 0.00 38.68 4.51
2024 2113 5.628797 ATGTTCTTGTTTTTGGAACCCAT 57.371 34.783 0.00 0.00 38.68 4.00
2025 2114 4.764172 TGTTCTTGTTTTTGGAACCCATG 58.236 39.130 0.00 0.00 38.68 3.66
2026 2115 3.467374 TCTTGTTTTTGGAACCCATGC 57.533 42.857 0.00 0.00 31.53 4.06
2027 2116 2.768527 TCTTGTTTTTGGAACCCATGCA 59.231 40.909 0.00 0.00 31.53 3.96
2028 2117 3.390639 TCTTGTTTTTGGAACCCATGCAT 59.609 39.130 0.00 0.00 31.53 3.96
2029 2118 3.123157 TGTTTTTGGAACCCATGCATG 57.877 42.857 20.19 20.19 31.53 4.06
2039 2128 2.965805 CCATGCATGGGTGTTGTCT 58.034 52.632 34.31 0.00 44.31 3.41
2040 2129 0.813184 CCATGCATGGGTGTTGTCTC 59.187 55.000 34.31 0.00 44.31 3.36
2041 2130 1.536940 CATGCATGGGTGTTGTCTCA 58.463 50.000 19.40 0.00 0.00 3.27
2042 2131 2.097036 CATGCATGGGTGTTGTCTCAT 58.903 47.619 19.40 0.00 0.00 2.90
2043 2132 2.291209 TGCATGGGTGTTGTCTCATT 57.709 45.000 0.00 0.00 0.00 2.57
2044 2133 1.887854 TGCATGGGTGTTGTCTCATTG 59.112 47.619 0.00 0.00 0.00 2.82
2045 2134 1.888512 GCATGGGTGTTGTCTCATTGT 59.111 47.619 0.00 0.00 0.00 2.71
2046 2135 2.352030 GCATGGGTGTTGTCTCATTGTG 60.352 50.000 0.00 0.00 0.00 3.33
2047 2136 3.148412 CATGGGTGTTGTCTCATTGTGA 58.852 45.455 0.00 0.00 0.00 3.58
2048 2137 3.507162 TGGGTGTTGTCTCATTGTGAT 57.493 42.857 0.00 0.00 0.00 3.06
2049 2138 3.831323 TGGGTGTTGTCTCATTGTGATT 58.169 40.909 0.00 0.00 0.00 2.57
2050 2139 4.214310 TGGGTGTTGTCTCATTGTGATTT 58.786 39.130 0.00 0.00 0.00 2.17
2051 2140 5.380900 TGGGTGTTGTCTCATTGTGATTTA 58.619 37.500 0.00 0.00 0.00 1.40
2052 2141 6.009589 TGGGTGTTGTCTCATTGTGATTTAT 58.990 36.000 0.00 0.00 0.00 1.40
2053 2142 6.150976 TGGGTGTTGTCTCATTGTGATTTATC 59.849 38.462 0.00 0.00 0.00 1.75
2054 2143 6.375455 GGGTGTTGTCTCATTGTGATTTATCT 59.625 38.462 0.00 0.00 0.00 1.98
2055 2144 7.552687 GGGTGTTGTCTCATTGTGATTTATCTA 59.447 37.037 0.00 0.00 0.00 1.98
2056 2145 9.113838 GGTGTTGTCTCATTGTGATTTATCTAT 57.886 33.333 0.00 0.00 0.00 1.98
2060 2149 8.599055 TGTCTCATTGTGATTTATCTATCTGC 57.401 34.615 0.00 0.00 0.00 4.26
2061 2150 7.658982 TGTCTCATTGTGATTTATCTATCTGCC 59.341 37.037 0.00 0.00 0.00 4.85
2062 2151 7.877097 GTCTCATTGTGATTTATCTATCTGCCT 59.123 37.037 0.00 0.00 0.00 4.75
2063 2152 8.093307 TCTCATTGTGATTTATCTATCTGCCTC 58.907 37.037 0.00 0.00 0.00 4.70
2064 2153 7.164122 TCATTGTGATTTATCTATCTGCCTCC 58.836 38.462 0.00 0.00 0.00 4.30
2065 2154 5.489792 TGTGATTTATCTATCTGCCTCCC 57.510 43.478 0.00 0.00 0.00 4.30
2066 2155 4.287067 TGTGATTTATCTATCTGCCTCCCC 59.713 45.833 0.00 0.00 0.00 4.81
2067 2156 3.846588 TGATTTATCTATCTGCCTCCCCC 59.153 47.826 0.00 0.00 0.00 5.40
2068 2157 3.360740 TTTATCTATCTGCCTCCCCCA 57.639 47.619 0.00 0.00 0.00 4.96
2069 2158 3.360740 TTATCTATCTGCCTCCCCCAA 57.639 47.619 0.00 0.00 0.00 4.12
2070 2159 1.439543 ATCTATCTGCCTCCCCCAAC 58.560 55.000 0.00 0.00 0.00 3.77
2071 2160 0.343372 TCTATCTGCCTCCCCCAACT 59.657 55.000 0.00 0.00 0.00 3.16
2072 2161 0.761802 CTATCTGCCTCCCCCAACTC 59.238 60.000 0.00 0.00 0.00 3.01
2073 2162 1.048724 TATCTGCCTCCCCCAACTCG 61.049 60.000 0.00 0.00 0.00 4.18
2074 2163 2.822643 ATCTGCCTCCCCCAACTCGA 62.823 60.000 0.00 0.00 0.00 4.04
2075 2164 3.003173 TGCCTCCCCCAACTCGAG 61.003 66.667 11.84 11.84 0.00 4.04
2076 2165 3.003763 GCCTCCCCCAACTCGAGT 61.004 66.667 13.58 13.58 0.00 4.18
2077 2166 1.684734 GCCTCCCCCAACTCGAGTA 60.685 63.158 20.39 0.14 0.00 2.59
2078 2167 1.262640 GCCTCCCCCAACTCGAGTAA 61.263 60.000 20.39 0.00 0.00 2.24
2079 2168 1.497161 CCTCCCCCAACTCGAGTAAT 58.503 55.000 20.39 0.04 0.00 1.89
2080 2169 1.413077 CCTCCCCCAACTCGAGTAATC 59.587 57.143 20.39 0.00 0.00 1.75
2081 2170 2.389715 CTCCCCCAACTCGAGTAATCT 58.610 52.381 20.39 0.00 0.00 2.40
2082 2171 2.766828 CTCCCCCAACTCGAGTAATCTT 59.233 50.000 20.39 0.00 0.00 2.40
2083 2172 3.178865 TCCCCCAACTCGAGTAATCTTT 58.821 45.455 20.39 0.00 0.00 2.52
2084 2173 3.055385 TCCCCCAACTCGAGTAATCTTTG 60.055 47.826 20.39 12.05 0.00 2.77
2085 2174 3.055385 CCCCCAACTCGAGTAATCTTTGA 60.055 47.826 20.39 0.00 0.00 2.69
2086 2175 4.184629 CCCCAACTCGAGTAATCTTTGAG 58.815 47.826 20.39 2.68 34.69 3.02
2087 2176 3.619038 CCCAACTCGAGTAATCTTTGAGC 59.381 47.826 20.39 0.00 33.03 4.26
2088 2177 3.619038 CCAACTCGAGTAATCTTTGAGCC 59.381 47.826 20.39 0.00 33.03 4.70
2089 2178 4.499183 CAACTCGAGTAATCTTTGAGCCT 58.501 43.478 20.39 0.00 33.03 4.58
2090 2179 4.810191 ACTCGAGTAATCTTTGAGCCTT 57.190 40.909 18.46 0.00 33.03 4.35
2091 2180 5.916661 ACTCGAGTAATCTTTGAGCCTTA 57.083 39.130 18.46 0.00 33.03 2.69
2092 2181 5.652518 ACTCGAGTAATCTTTGAGCCTTAC 58.347 41.667 18.46 0.00 33.03 2.34
2093 2182 4.669318 TCGAGTAATCTTTGAGCCTTACG 58.331 43.478 0.00 0.00 31.08 3.18
2094 2183 3.797256 CGAGTAATCTTTGAGCCTTACGG 59.203 47.826 0.00 0.00 31.08 4.02
2095 2184 4.120589 GAGTAATCTTTGAGCCTTACGGG 58.879 47.826 0.00 0.00 38.36 5.28
2096 2185 3.518303 AGTAATCTTTGAGCCTTACGGGT 59.482 43.478 0.00 0.00 45.53 5.28
2097 2186 3.434940 AATCTTTGAGCCTTACGGGTT 57.565 42.857 0.00 0.00 42.17 4.11
2098 2187 2.178912 TCTTTGAGCCTTACGGGTTG 57.821 50.000 0.00 0.00 42.17 3.77
2099 2188 0.521735 CTTTGAGCCTTACGGGTTGC 59.478 55.000 0.00 0.00 42.17 4.17
2100 2189 0.891904 TTTGAGCCTTACGGGTTGCC 60.892 55.000 0.00 0.00 42.17 4.52
2101 2190 2.437895 GAGCCTTACGGGTTGCCC 60.438 66.667 0.00 0.00 42.17 5.36
2115 2204 4.551702 GGTTGCCCCAATCAAATAAAGT 57.448 40.909 0.00 0.00 0.00 2.66
2116 2205 5.669164 GGTTGCCCCAATCAAATAAAGTA 57.331 39.130 0.00 0.00 0.00 2.24
2117 2206 6.043854 GGTTGCCCCAATCAAATAAAGTAA 57.956 37.500 0.00 0.00 0.00 2.24
2118 2207 6.649155 GGTTGCCCCAATCAAATAAAGTAAT 58.351 36.000 0.00 0.00 0.00 1.89
2119 2208 7.109501 GGTTGCCCCAATCAAATAAAGTAATT 58.890 34.615 0.00 0.00 0.00 1.40
2120 2209 7.279981 GGTTGCCCCAATCAAATAAAGTAATTC 59.720 37.037 0.00 0.00 0.00 2.17
2121 2210 7.487822 TGCCCCAATCAAATAAAGTAATTCA 57.512 32.000 0.00 0.00 0.00 2.57
2122 2211 7.911651 TGCCCCAATCAAATAAAGTAATTCAA 58.088 30.769 0.00 0.00 0.00 2.69
2123 2212 8.378565 TGCCCCAATCAAATAAAGTAATTCAAA 58.621 29.630 0.00 0.00 0.00 2.69
2124 2213 8.664798 GCCCCAATCAAATAAAGTAATTCAAAC 58.335 33.333 0.00 0.00 0.00 2.93
2125 2214 9.942850 CCCCAATCAAATAAAGTAATTCAAACT 57.057 29.630 0.00 0.00 0.00 2.66
2175 2264 9.280456 AGACCTTATATTATTCCCGGATTATGT 57.720 33.333 0.73 0.00 0.00 2.29
2176 2265 9.543783 GACCTTATATTATTCCCGGATTATGTC 57.456 37.037 0.73 0.00 0.00 3.06
2177 2266 9.053472 ACCTTATATTATTCCCGGATTATGTCA 57.947 33.333 0.73 0.00 0.00 3.58
2212 2301 7.948278 AAACTACAGATGTAACAAGAGACAC 57.052 36.000 0.00 0.00 0.00 3.67
2213 2302 6.902771 ACTACAGATGTAACAAGAGACACT 57.097 37.500 0.00 0.00 0.00 3.55
2214 2303 7.997773 ACTACAGATGTAACAAGAGACACTA 57.002 36.000 0.00 0.00 0.00 2.74
2215 2304 7.818642 ACTACAGATGTAACAAGAGACACTAC 58.181 38.462 0.00 0.00 0.00 2.73
2216 2305 6.650427 ACAGATGTAACAAGAGACACTACA 57.350 37.500 0.00 0.00 0.00 2.74
2217 2306 7.050970 ACAGATGTAACAAGAGACACTACAA 57.949 36.000 0.00 0.00 0.00 2.41
2218 2307 7.497595 ACAGATGTAACAAGAGACACTACAAA 58.502 34.615 0.00 0.00 0.00 2.83
2219 2308 7.985184 ACAGATGTAACAAGAGACACTACAAAA 59.015 33.333 0.00 0.00 0.00 2.44
2220 2309 8.826710 CAGATGTAACAAGAGACACTACAAAAA 58.173 33.333 0.00 0.00 0.00 1.94
2221 2310 9.561069 AGATGTAACAAGAGACACTACAAAAAT 57.439 29.630 0.00 0.00 0.00 1.82
2224 2313 9.168451 TGTAACAAGAGACACTACAAAAATTCA 57.832 29.630 0.00 0.00 0.00 2.57
2225 2314 9.997482 GTAACAAGAGACACTACAAAAATTCAA 57.003 29.630 0.00 0.00 0.00 2.69
2227 2316 8.911247 ACAAGAGACACTACAAAAATTCAAAC 57.089 30.769 0.00 0.00 0.00 2.93
2228 2317 7.696453 ACAAGAGACACTACAAAAATTCAAACG 59.304 33.333 0.00 0.00 0.00 3.60
2229 2318 7.548196 AGAGACACTACAAAAATTCAAACGA 57.452 32.000 0.00 0.00 0.00 3.85
2230 2319 8.154649 AGAGACACTACAAAAATTCAAACGAT 57.845 30.769 0.00 0.00 0.00 3.73
2231 2320 8.283291 AGAGACACTACAAAAATTCAAACGATC 58.717 33.333 0.00 0.00 0.00 3.69
2232 2321 7.360361 AGACACTACAAAAATTCAAACGATCC 58.640 34.615 0.00 0.00 0.00 3.36
2233 2322 7.012894 AGACACTACAAAAATTCAAACGATCCA 59.987 33.333 0.00 0.00 0.00 3.41
2234 2323 7.657336 ACACTACAAAAATTCAAACGATCCAT 58.343 30.769 0.00 0.00 0.00 3.41
2235 2324 7.807907 ACACTACAAAAATTCAAACGATCCATC 59.192 33.333 0.00 0.00 0.00 3.51
2236 2325 7.807433 CACTACAAAAATTCAAACGATCCATCA 59.193 33.333 0.00 0.00 0.00 3.07
2237 2326 8.522830 ACTACAAAAATTCAAACGATCCATCAT 58.477 29.630 0.00 0.00 0.00 2.45
2238 2327 7.585286 ACAAAAATTCAAACGATCCATCATG 57.415 32.000 0.00 0.00 0.00 3.07
2239 2328 6.591062 ACAAAAATTCAAACGATCCATCATGG 59.409 34.615 0.00 0.00 39.43 3.66
2252 2341 3.884693 TCCATCATGGAATTTGGATGACG 59.115 43.478 2.95 0.00 45.00 4.35
2253 2342 3.884693 CCATCATGGAATTTGGATGACGA 59.115 43.478 0.00 0.00 40.96 4.20
2254 2343 4.521639 CCATCATGGAATTTGGATGACGAT 59.478 41.667 0.00 0.00 40.96 3.73
2255 2344 5.335426 CCATCATGGAATTTGGATGACGATC 60.335 44.000 0.00 0.00 40.96 3.69
2256 2345 5.039920 TCATGGAATTTGGATGACGATCT 57.960 39.130 0.00 0.00 0.00 2.75
2257 2346 5.059161 TCATGGAATTTGGATGACGATCTC 58.941 41.667 0.00 0.00 0.00 2.75
2258 2347 4.486125 TGGAATTTGGATGACGATCTCA 57.514 40.909 0.00 0.00 0.00 3.27
2259 2348 4.445453 TGGAATTTGGATGACGATCTCAG 58.555 43.478 0.00 0.00 30.20 3.35
2260 2349 3.812053 GGAATTTGGATGACGATCTCAGG 59.188 47.826 0.00 0.00 30.20 3.86
2261 2350 4.443457 GGAATTTGGATGACGATCTCAGGA 60.443 45.833 0.00 0.00 30.20 3.86
2262 2351 4.760530 ATTTGGATGACGATCTCAGGAA 57.239 40.909 0.00 0.00 30.20 3.36
2263 2352 3.526931 TTGGATGACGATCTCAGGAAC 57.473 47.619 0.00 0.00 30.20 3.62
2264 2353 1.405463 TGGATGACGATCTCAGGAACG 59.595 52.381 0.00 0.00 42.21 3.95
2269 2358 0.168348 ACGATCTCAGGAACGTCACG 59.832 55.000 0.00 0.00 45.33 4.35
2270 2359 0.523546 CGATCTCAGGAACGTCACGG 60.524 60.000 0.35 0.00 33.94 4.94
2271 2360 0.809385 GATCTCAGGAACGTCACGGA 59.191 55.000 0.35 0.00 0.00 4.69
2272 2361 1.405821 GATCTCAGGAACGTCACGGAT 59.594 52.381 0.35 0.00 0.00 4.18
2273 2362 2.118313 TCTCAGGAACGTCACGGATA 57.882 50.000 0.35 0.00 0.00 2.59
2274 2363 2.651455 TCTCAGGAACGTCACGGATAT 58.349 47.619 0.35 0.00 0.00 1.63
2275 2364 2.357952 TCTCAGGAACGTCACGGATATG 59.642 50.000 0.35 0.00 0.00 1.78
2276 2365 1.407618 TCAGGAACGTCACGGATATGG 59.592 52.381 0.35 0.00 0.00 2.74
2277 2366 1.136305 CAGGAACGTCACGGATATGGT 59.864 52.381 0.35 0.00 0.00 3.55
2278 2367 1.829222 AGGAACGTCACGGATATGGTT 59.171 47.619 0.35 0.00 0.00 3.67
2279 2368 2.159142 AGGAACGTCACGGATATGGTTC 60.159 50.000 0.35 0.00 34.54 3.62
2280 2369 1.850441 GAACGTCACGGATATGGTTCG 59.150 52.381 0.35 0.00 0.00 3.95
2281 2370 0.813184 ACGTCACGGATATGGTTCGT 59.187 50.000 0.35 0.00 37.64 3.85
2282 2371 1.202222 ACGTCACGGATATGGTTCGTC 60.202 52.381 0.35 0.00 34.73 4.20
2283 2372 1.849097 GTCACGGATATGGTTCGTCC 58.151 55.000 0.00 0.00 34.73 4.79
2284 2373 1.407979 GTCACGGATATGGTTCGTCCT 59.592 52.381 0.00 0.00 34.73 3.85
2285 2374 2.620115 GTCACGGATATGGTTCGTCCTA 59.380 50.000 0.00 0.00 34.73 2.94
2286 2375 3.255149 GTCACGGATATGGTTCGTCCTAT 59.745 47.826 0.00 0.00 34.73 2.57
2287 2376 4.456911 GTCACGGATATGGTTCGTCCTATA 59.543 45.833 0.00 0.00 34.73 1.31
2288 2377 5.125097 GTCACGGATATGGTTCGTCCTATAT 59.875 44.000 0.00 0.00 34.73 0.86
2289 2378 6.317140 GTCACGGATATGGTTCGTCCTATATA 59.683 42.308 0.00 0.00 34.73 0.86
2290 2379 7.013083 GTCACGGATATGGTTCGTCCTATATAT 59.987 40.741 0.00 0.00 34.73 0.86
2291 2380 7.012989 TCACGGATATGGTTCGTCCTATATATG 59.987 40.741 0.00 0.00 34.73 1.78
2292 2381 7.012989 CACGGATATGGTTCGTCCTATATATGA 59.987 40.741 0.00 0.00 34.73 2.15
2293 2382 7.724506 ACGGATATGGTTCGTCCTATATATGAT 59.275 37.037 0.00 0.00 37.07 2.45
2294 2383 8.023706 CGGATATGGTTCGTCCTATATATGATG 58.976 40.741 0.00 1.82 37.07 3.07
2295 2384 9.078990 GGATATGGTTCGTCCTATATATGATGA 57.921 37.037 5.98 5.98 37.07 2.92
2298 2387 7.348080 TGGTTCGTCCTATATATGATGATCC 57.652 40.000 20.17 20.17 37.10 3.36
2299 2388 6.323996 TGGTTCGTCCTATATATGATGATCCC 59.676 42.308 22.18 17.97 36.31 3.85
2300 2389 6.323996 GGTTCGTCCTATATATGATGATCCCA 59.676 42.308 18.06 2.52 33.27 4.37
2301 2390 7.147724 GGTTCGTCCTATATATGATGATCCCAA 60.148 40.741 18.06 2.26 33.27 4.12
2302 2391 8.424918 GTTCGTCCTATATATGATGATCCCAAT 58.575 37.037 9.83 0.00 0.00 3.16
2303 2392 7.955918 TCGTCCTATATATGATGATCCCAATG 58.044 38.462 5.98 0.00 0.00 2.82
2304 2393 7.565029 TCGTCCTATATATGATGATCCCAATGT 59.435 37.037 5.98 0.00 0.00 2.71
2305 2394 7.869937 CGTCCTATATATGATGATCCCAATGTC 59.130 40.741 2.01 0.00 0.00 3.06
2306 2395 8.708378 GTCCTATATATGATGATCCCAATGTCA 58.292 37.037 0.00 0.00 0.00 3.58
2307 2396 9.456459 TCCTATATATGATGATCCCAATGTCAT 57.544 33.333 0.00 0.00 37.76 3.06
2308 2397 9.722184 CCTATATATGATGATCCCAATGTCATC 57.278 37.037 8.09 8.09 46.86 2.92
2313 2402 4.659115 GATGATCCCAATGTCATCATGGA 58.341 43.478 8.39 3.34 46.27 3.41
2314 2403 4.734843 TGATCCCAATGTCATCATGGAT 57.265 40.909 5.26 7.54 38.63 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 3.542712 AAGCAACTACGTGAGCAATTG 57.457 42.857 0.00 0.00 0.00 2.32
129 130 6.126478 ACCTAGTGTTCCCTGCATAATTGTAT 60.126 38.462 0.00 0.00 0.00 2.29
263 264 2.612972 CGCCACAACATCCAAGTAGTCT 60.613 50.000 0.00 0.00 0.00 3.24
561 580 3.776969 TGGGTTTCATCTCTGCATCTAGT 59.223 43.478 0.00 0.00 0.00 2.57
643 662 4.850822 TGTTCCGGCAACACGTTA 57.149 50.000 13.34 0.00 40.29 3.18
653 672 9.455847 GTTGTATAGTTACTTACTATGTTCCGG 57.544 37.037 0.00 0.00 46.95 5.14
806 838 4.770795 ACACACCAAAGCTATAGATGTCC 58.229 43.478 3.21 0.00 0.00 4.02
1146 1209 5.337578 TCATAACTGATGACATCAACGGA 57.662 39.130 18.49 9.46 39.78 4.69
1343 1406 1.591158 CCACCGAACGCACACATATAC 59.409 52.381 0.00 0.00 0.00 1.47
1354 1417 0.596600 CCATCCGTATCCACCGAACG 60.597 60.000 0.00 0.00 36.42 3.95
1413 1476 1.225855 TGATGCACGACCACTTTGTC 58.774 50.000 0.00 0.00 0.00 3.18
1436 1499 9.308000 AGACCAATACAATGACTTCCAAATAAA 57.692 29.630 0.00 0.00 0.00 1.40
1493 1556 8.225603 TGCAATAACTGGATCCTAAGATTTTC 57.774 34.615 14.23 3.54 30.90 2.29
1509 1572 7.807907 GCATGTAGTGTTTAAGTTGCAATAACT 59.192 33.333 0.59 0.00 0.00 2.24
1510 1573 7.807907 AGCATGTAGTGTTTAAGTTGCAATAAC 59.192 33.333 0.59 6.12 0.00 1.89
1512 1575 7.304735 CAGCATGTAGTGTTTAAGTTGCAATA 58.695 34.615 0.59 0.00 0.00 1.90
1513 1576 6.151691 CAGCATGTAGTGTTTAAGTTGCAAT 58.848 36.000 0.59 0.00 0.00 3.56
1514 1577 5.518812 CAGCATGTAGTGTTTAAGTTGCAA 58.481 37.500 0.00 0.00 0.00 4.08
1531 1594 0.813184 GTGAATGGGGTCACAGCATG 59.187 55.000 0.55 0.00 46.00 4.06
1532 1595 3.271250 GTGAATGGGGTCACAGCAT 57.729 52.632 0.55 0.00 46.00 3.79
1533 1596 4.819783 GTGAATGGGGTCACAGCA 57.180 55.556 0.55 0.00 46.00 4.41
1548 1637 6.454795 AGTGTTTAAGTTGCAATAATGGGTG 58.545 36.000 0.59 0.00 0.00 4.61
1577 1666 1.868469 TGCCACTGCAATTTTTCAGC 58.132 45.000 0.00 0.00 46.66 4.26
1588 1677 2.753043 CTCCCACCATGCCACTGC 60.753 66.667 0.00 0.00 38.26 4.40
1589 1678 0.251297 TTTCTCCCACCATGCCACTG 60.251 55.000 0.00 0.00 0.00 3.66
1590 1679 0.482446 TTTTCTCCCACCATGCCACT 59.518 50.000 0.00 0.00 0.00 4.00
1591 1680 1.560505 ATTTTCTCCCACCATGCCAC 58.439 50.000 0.00 0.00 0.00 5.01
1592 1681 2.042297 TGTATTTTCTCCCACCATGCCA 59.958 45.455 0.00 0.00 0.00 4.92
1593 1682 2.427095 GTGTATTTTCTCCCACCATGCC 59.573 50.000 0.00 0.00 0.00 4.40
1594 1683 3.088532 TGTGTATTTTCTCCCACCATGC 58.911 45.455 0.00 0.00 0.00 4.06
1595 1684 4.440525 GCATGTGTATTTTCTCCCACCATG 60.441 45.833 0.00 0.00 0.00 3.66
1596 1685 3.701040 GCATGTGTATTTTCTCCCACCAT 59.299 43.478 0.00 0.00 0.00 3.55
1597 1686 3.088532 GCATGTGTATTTTCTCCCACCA 58.911 45.455 0.00 0.00 0.00 4.17
1598 1687 3.088532 TGCATGTGTATTTTCTCCCACC 58.911 45.455 0.00 0.00 0.00 4.61
1599 1688 4.496341 CGATGCATGTGTATTTTCTCCCAC 60.496 45.833 2.46 0.00 0.00 4.61
1600 1689 3.627123 CGATGCATGTGTATTTTCTCCCA 59.373 43.478 2.46 0.00 0.00 4.37
1601 1690 3.876914 TCGATGCATGTGTATTTTCTCCC 59.123 43.478 2.46 0.00 0.00 4.30
1602 1691 5.008019 ACATCGATGCATGTGTATTTTCTCC 59.992 40.000 25.11 0.00 35.57 3.71
1603 1692 6.052840 ACATCGATGCATGTGTATTTTCTC 57.947 37.500 25.11 0.00 35.57 2.87
1604 1693 6.260377 CAACATCGATGCATGTGTATTTTCT 58.740 36.000 25.11 0.00 37.07 2.52
1605 1694 5.456497 CCAACATCGATGCATGTGTATTTTC 59.544 40.000 25.11 0.00 37.07 2.29
1606 1695 5.105797 ACCAACATCGATGCATGTGTATTTT 60.106 36.000 25.11 5.09 37.07 1.82
1607 1696 4.398988 ACCAACATCGATGCATGTGTATTT 59.601 37.500 25.11 5.83 37.07 1.40
1608 1697 3.947196 ACCAACATCGATGCATGTGTATT 59.053 39.130 25.11 6.56 37.07 1.89
1609 1698 3.313249 CACCAACATCGATGCATGTGTAT 59.687 43.478 25.11 0.00 37.07 2.29
1610 1699 2.677337 CACCAACATCGATGCATGTGTA 59.323 45.455 25.11 0.00 37.07 2.90
1611 1700 1.469703 CACCAACATCGATGCATGTGT 59.530 47.619 25.11 18.43 37.07 3.72
1612 1701 1.469703 ACACCAACATCGATGCATGTG 59.530 47.619 26.89 26.89 37.07 3.21
1613 1702 1.825090 ACACCAACATCGATGCATGT 58.175 45.000 25.11 19.16 38.74 3.21
1614 1703 3.560896 TGATACACCAACATCGATGCATG 59.439 43.478 25.11 21.93 0.00 4.06
1615 1704 3.807553 TGATACACCAACATCGATGCAT 58.192 40.909 25.11 11.78 0.00 3.96
1616 1705 3.197265 CTGATACACCAACATCGATGCA 58.803 45.455 25.11 10.39 0.00 3.96
1617 1706 3.198068 ACTGATACACCAACATCGATGC 58.802 45.455 25.11 6.15 0.00 3.91
1618 1707 5.592054 ACTACTGATACACCAACATCGATG 58.408 41.667 23.68 23.68 0.00 3.84
1619 1708 5.854010 ACTACTGATACACCAACATCGAT 57.146 39.130 0.00 0.00 0.00 3.59
1620 1709 5.654603 AACTACTGATACACCAACATCGA 57.345 39.130 0.00 0.00 0.00 3.59
1621 1710 6.590292 AGAAAACTACTGATACACCAACATCG 59.410 38.462 0.00 0.00 0.00 3.84
1622 1711 7.064728 GGAGAAAACTACTGATACACCAACATC 59.935 40.741 0.00 0.00 0.00 3.06
1623 1712 6.879458 GGAGAAAACTACTGATACACCAACAT 59.121 38.462 0.00 0.00 0.00 2.71
1624 1713 6.042781 AGGAGAAAACTACTGATACACCAACA 59.957 38.462 0.00 0.00 0.00 3.33
1625 1714 6.465084 AGGAGAAAACTACTGATACACCAAC 58.535 40.000 0.00 0.00 0.00 3.77
1626 1715 6.681729 AGGAGAAAACTACTGATACACCAA 57.318 37.500 0.00 0.00 0.00 3.67
1627 1716 6.681729 AAGGAGAAAACTACTGATACACCA 57.318 37.500 0.00 0.00 0.00 4.17
1628 1717 9.498176 TTTAAAGGAGAAAACTACTGATACACC 57.502 33.333 0.00 0.00 0.00 4.16
1652 1741 9.674824 GCACATACGTGACTACTAGTATAATTT 57.325 33.333 2.33 0.00 46.80 1.82
1653 1742 8.843262 TGCACATACGTGACTACTAGTATAATT 58.157 33.333 2.33 0.00 46.80 1.40
1654 1743 8.288208 GTGCACATACGTGACTACTAGTATAAT 58.712 37.037 13.17 0.00 46.80 1.28
1655 1744 7.517259 CGTGCACATACGTGACTACTAGTATAA 60.517 40.741 18.64 0.00 46.80 0.98
1656 1745 6.074142 CGTGCACATACGTGACTACTAGTATA 60.074 42.308 18.64 0.00 46.80 1.47
1657 1746 5.277202 CGTGCACATACGTGACTACTAGTAT 60.277 44.000 18.64 0.00 46.80 2.12
1658 1747 4.033243 CGTGCACATACGTGACTACTAGTA 59.967 45.833 18.64 1.89 46.80 1.82
1659 1748 3.181513 CGTGCACATACGTGACTACTAGT 60.182 47.826 18.64 0.00 46.80 2.57
1660 1749 3.063045 TCGTGCACATACGTGACTACTAG 59.937 47.826 18.64 0.00 46.80 2.57
1661 1750 3.002102 TCGTGCACATACGTGACTACTA 58.998 45.455 18.64 0.00 46.80 1.82
1662 1751 1.808343 TCGTGCACATACGTGACTACT 59.192 47.619 18.64 0.00 46.80 2.57
1663 1752 2.251869 TCGTGCACATACGTGACTAC 57.748 50.000 18.64 0.00 46.80 2.73
1664 1753 2.993449 TTCGTGCACATACGTGACTA 57.007 45.000 18.64 0.00 46.80 2.59
1665 1754 2.143008 TTTCGTGCACATACGTGACT 57.857 45.000 18.64 0.00 46.80 3.41
1666 1755 2.156891 ACATTTCGTGCACATACGTGAC 59.843 45.455 18.64 0.00 46.80 3.67
1667 1756 2.409012 ACATTTCGTGCACATACGTGA 58.591 42.857 18.64 1.26 46.80 4.35
1668 1757 2.473868 GGACATTTCGTGCACATACGTG 60.474 50.000 18.64 10.73 46.56 4.49
1669 1758 1.730064 GGACATTTCGTGCACATACGT 59.270 47.619 18.64 6.64 44.06 3.57
1670 1759 1.729517 TGGACATTTCGTGCACATACG 59.270 47.619 18.64 2.38 41.63 3.06
1671 1760 2.742053 ACTGGACATTTCGTGCACATAC 59.258 45.455 18.64 1.21 41.63 2.39
1672 1761 3.052455 ACTGGACATTTCGTGCACATA 57.948 42.857 18.64 0.42 41.63 2.29
1673 1762 1.896220 ACTGGACATTTCGTGCACAT 58.104 45.000 18.64 0.00 41.63 3.21
1674 1763 1.674359 AACTGGACATTTCGTGCACA 58.326 45.000 18.64 0.81 41.63 4.57
1675 1764 2.384382 CAAACTGGACATTTCGTGCAC 58.616 47.619 6.82 6.82 41.63 4.57
1676 1765 1.336440 CCAAACTGGACATTTCGTGCA 59.664 47.619 0.00 0.00 44.70 4.57
1677 1766 1.930371 GCCAAACTGGACATTTCGTGC 60.930 52.381 0.00 0.00 40.96 5.34
1678 1767 1.336440 TGCCAAACTGGACATTTCGTG 59.664 47.619 0.00 0.00 40.96 4.35
1679 1768 1.608590 CTGCCAAACTGGACATTTCGT 59.391 47.619 0.00 0.00 40.96 3.85
1680 1769 1.608590 ACTGCCAAACTGGACATTTCG 59.391 47.619 0.00 0.00 40.96 3.46
1681 1770 4.846779 TTACTGCCAAACTGGACATTTC 57.153 40.909 0.00 0.00 40.96 2.17
1682 1771 7.480760 AATATTACTGCCAAACTGGACATTT 57.519 32.000 0.00 0.00 40.96 2.32
1683 1772 8.766994 ATAATATTACTGCCAAACTGGACATT 57.233 30.769 0.00 0.00 40.96 2.71
1684 1773 8.766994 AATAATATTACTGCCAAACTGGACAT 57.233 30.769 0.00 0.00 40.96 3.06
1685 1774 8.588290 AAATAATATTACTGCCAAACTGGACA 57.412 30.769 0.00 0.00 40.96 4.02
1686 1775 7.855904 CGAAATAATATTACTGCCAAACTGGAC 59.144 37.037 0.00 0.00 40.96 4.02
1687 1776 7.771361 TCGAAATAATATTACTGCCAAACTGGA 59.229 33.333 0.00 0.00 40.96 3.86
1688 1777 7.925993 TCGAAATAATATTACTGCCAAACTGG 58.074 34.615 0.00 0.00 41.55 4.00
1689 1778 9.438291 CTTCGAAATAATATTACTGCCAAACTG 57.562 33.333 0.00 0.00 0.00 3.16
1690 1779 9.391006 TCTTCGAAATAATATTACTGCCAAACT 57.609 29.630 0.00 0.00 0.00 2.66
1798 1887 9.887629 TCAAAATATGTTGATTGCATAAACCAT 57.112 25.926 4.07 0.00 32.56 3.55
1799 1888 9.716531 TTCAAAATATGTTGATTGCATAAACCA 57.283 25.926 9.17 0.00 37.36 3.67
1819 1908 9.654663 TGCATCACATCATCAATAATTTCAAAA 57.345 25.926 0.00 0.00 0.00 2.44
1820 1909 9.825109 ATGCATCACATCATCAATAATTTCAAA 57.175 25.926 0.00 0.00 31.52 2.69
1822 1911 9.902196 GTATGCATCACATCATCAATAATTTCA 57.098 29.630 0.19 0.00 40.38 2.69
1823 1912 9.902196 TGTATGCATCACATCATCAATAATTTC 57.098 29.630 0.19 0.00 40.38 2.17
1824 1913 9.687210 GTGTATGCATCACATCATCAATAATTT 57.313 29.630 18.50 0.00 40.38 1.82
1825 1914 8.301720 GGTGTATGCATCACATCATCAATAATT 58.698 33.333 22.34 0.00 40.38 1.40
1826 1915 7.449086 TGGTGTATGCATCACATCATCAATAAT 59.551 33.333 22.34 0.00 40.38 1.28
1827 1916 6.771749 TGGTGTATGCATCACATCATCAATAA 59.228 34.615 22.34 2.42 40.38 1.40
1828 1917 6.297582 TGGTGTATGCATCACATCATCAATA 58.702 36.000 22.34 2.93 40.38 1.90
1829 1918 5.134661 TGGTGTATGCATCACATCATCAAT 58.865 37.500 22.34 0.00 40.38 2.57
1830 1919 4.525024 TGGTGTATGCATCACATCATCAA 58.475 39.130 22.34 3.71 40.38 2.57
1831 1920 4.153673 TGGTGTATGCATCACATCATCA 57.846 40.909 22.34 12.00 40.38 3.07
1832 1921 5.458015 CAATGGTGTATGCATCACATCATC 58.542 41.667 23.47 11.29 44.91 2.92
1834 1923 3.633065 CCAATGGTGTATGCATCACATCA 59.367 43.478 22.34 20.38 41.07 3.07
1835 1924 3.884693 TCCAATGGTGTATGCATCACATC 59.115 43.478 22.34 16.80 38.73 3.06
1836 1925 3.887110 CTCCAATGGTGTATGCATCACAT 59.113 43.478 22.34 12.87 38.73 3.21
1837 1926 3.281158 CTCCAATGGTGTATGCATCACA 58.719 45.455 22.34 14.70 38.73 3.58
1838 1927 2.033801 GCTCCAATGGTGTATGCATCAC 59.966 50.000 0.19 11.38 38.73 3.06
1839 1928 2.300433 GCTCCAATGGTGTATGCATCA 58.700 47.619 0.19 0.00 40.42 3.07
1840 1929 2.300433 TGCTCCAATGGTGTATGCATC 58.700 47.619 0.19 0.00 0.00 3.91
1841 1930 2.440517 TGCTCCAATGGTGTATGCAT 57.559 45.000 3.79 3.79 0.00 3.96
1842 1931 2.212812 TTGCTCCAATGGTGTATGCA 57.787 45.000 0.00 0.00 0.00 3.96
1843 1932 4.520111 TGATATTGCTCCAATGGTGTATGC 59.480 41.667 0.00 0.00 35.54 3.14
1844 1933 5.999600 TCTGATATTGCTCCAATGGTGTATG 59.000 40.000 0.00 0.00 35.54 2.39
1845 1934 6.191657 TCTGATATTGCTCCAATGGTGTAT 57.808 37.500 0.00 0.00 35.54 2.29
1846 1935 5.628797 TCTGATATTGCTCCAATGGTGTA 57.371 39.130 0.00 0.00 35.54 2.90
1847 1936 4.508551 TCTGATATTGCTCCAATGGTGT 57.491 40.909 0.00 0.00 35.54 4.16
1848 1937 4.825634 ACATCTGATATTGCTCCAATGGTG 59.174 41.667 0.00 0.00 35.54 4.17
1849 1938 5.057843 ACATCTGATATTGCTCCAATGGT 57.942 39.130 0.00 0.00 35.54 3.55
1850 1939 5.278808 CCAACATCTGATATTGCTCCAATGG 60.279 44.000 3.14 0.00 35.54 3.16
1851 1940 5.533528 TCCAACATCTGATATTGCTCCAATG 59.466 40.000 3.14 0.00 35.54 2.82
1852 1941 5.698104 TCCAACATCTGATATTGCTCCAAT 58.302 37.500 3.14 0.00 37.80 3.16
1853 1942 5.114764 TCCAACATCTGATATTGCTCCAA 57.885 39.130 3.14 0.00 0.00 3.53
1854 1943 4.776435 TCCAACATCTGATATTGCTCCA 57.224 40.909 3.14 0.00 0.00 3.86
1855 1944 7.714377 CCTATATCCAACATCTGATATTGCTCC 59.286 40.741 3.14 0.00 36.06 4.70
1856 1945 8.263640 ACCTATATCCAACATCTGATATTGCTC 58.736 37.037 3.14 0.00 36.06 4.26
1857 1946 8.155620 ACCTATATCCAACATCTGATATTGCT 57.844 34.615 3.14 0.00 36.06 3.91
1858 1947 9.890629 TTACCTATATCCAACATCTGATATTGC 57.109 33.333 3.14 0.00 36.06 3.56
1863 1952 9.116080 TCCAATTACCTATATCCAACATCTGAT 57.884 33.333 0.00 0.00 0.00 2.90
1864 1953 8.504811 TCCAATTACCTATATCCAACATCTGA 57.495 34.615 0.00 0.00 0.00 3.27
1865 1954 9.170734 CATCCAATTACCTATATCCAACATCTG 57.829 37.037 0.00 0.00 0.00 2.90
1866 1955 8.331740 CCATCCAATTACCTATATCCAACATCT 58.668 37.037 0.00 0.00 0.00 2.90
1867 1956 7.067494 GCCATCCAATTACCTATATCCAACATC 59.933 40.741 0.00 0.00 0.00 3.06
1868 1957 6.891908 GCCATCCAATTACCTATATCCAACAT 59.108 38.462 0.00 0.00 0.00 2.71
1869 1958 6.245408 GCCATCCAATTACCTATATCCAACA 58.755 40.000 0.00 0.00 0.00 3.33
1870 1959 5.652452 GGCCATCCAATTACCTATATCCAAC 59.348 44.000 0.00 0.00 0.00 3.77
1871 1960 5.281506 GGGCCATCCAATTACCTATATCCAA 60.282 44.000 4.39 0.00 35.00 3.53
1872 1961 4.229582 GGGCCATCCAATTACCTATATCCA 59.770 45.833 4.39 0.00 35.00 3.41
1873 1962 4.229582 TGGGCCATCCAATTACCTATATCC 59.770 45.833 0.00 0.00 43.84 2.59
1874 1963 5.191722 TCTGGGCCATCCAATTACCTATATC 59.808 44.000 6.72 0.00 46.51 1.63
1875 1964 5.108026 TCTGGGCCATCCAATTACCTATAT 58.892 41.667 6.72 0.00 46.51 0.86
1876 1965 4.508331 TCTGGGCCATCCAATTACCTATA 58.492 43.478 6.72 0.00 46.51 1.31
1877 1966 3.335748 TCTGGGCCATCCAATTACCTAT 58.664 45.455 6.72 0.00 46.51 2.57
1878 1967 2.782922 TCTGGGCCATCCAATTACCTA 58.217 47.619 6.72 0.00 46.51 3.08
1879 1968 1.607225 TCTGGGCCATCCAATTACCT 58.393 50.000 6.72 0.00 46.51 3.08
1880 1969 2.158475 TGATCTGGGCCATCCAATTACC 60.158 50.000 6.72 0.00 46.51 2.85
1881 1970 3.228188 TGATCTGGGCCATCCAATTAC 57.772 47.619 6.72 0.00 46.51 1.89
1882 1971 4.474303 AATGATCTGGGCCATCCAATTA 57.526 40.909 6.72 0.00 46.51 1.40
1883 1972 3.339713 AATGATCTGGGCCATCCAATT 57.660 42.857 6.72 2.60 46.51 2.32
1884 1973 3.236896 GAAATGATCTGGGCCATCCAAT 58.763 45.455 6.72 0.00 46.51 3.16
1885 1974 2.669781 GAAATGATCTGGGCCATCCAA 58.330 47.619 6.72 0.00 46.51 3.53
1886 1975 1.477377 CGAAATGATCTGGGCCATCCA 60.477 52.381 6.72 5.84 44.79 3.41
1887 1976 1.202806 TCGAAATGATCTGGGCCATCC 60.203 52.381 6.72 0.00 0.00 3.51
1888 1977 2.260844 TCGAAATGATCTGGGCCATC 57.739 50.000 6.72 2.75 0.00 3.51
1889 1978 2.965671 ATCGAAATGATCTGGGCCAT 57.034 45.000 6.72 0.00 28.49 4.40
1890 1979 2.092484 TGAATCGAAATGATCTGGGCCA 60.092 45.455 5.85 5.85 35.84 5.36
1891 1980 2.575532 TGAATCGAAATGATCTGGGCC 58.424 47.619 0.00 0.00 35.84 5.80
1892 1981 3.817084 TGATGAATCGAAATGATCTGGGC 59.183 43.478 0.00 0.00 35.84 5.36
1893 1982 6.039047 AGTTTGATGAATCGAAATGATCTGGG 59.961 38.462 0.00 0.00 35.84 4.45
1894 1983 7.024340 AGTTTGATGAATCGAAATGATCTGG 57.976 36.000 0.00 0.00 35.84 3.86
1895 1984 6.844779 CGAGTTTGATGAATCGAAATGATCTG 59.155 38.462 0.00 0.00 35.84 2.90
1896 1985 6.536582 ACGAGTTTGATGAATCGAAATGATCT 59.463 34.615 1.67 0.00 35.84 2.75
1897 1986 6.626488 CACGAGTTTGATGAATCGAAATGATC 59.374 38.462 1.67 0.00 35.84 2.92
1898 1987 6.481134 CACGAGTTTGATGAATCGAAATGAT 58.519 36.000 1.67 0.00 39.67 2.45
1899 1988 5.671082 GCACGAGTTTGATGAATCGAAATGA 60.671 40.000 1.67 0.00 38.50 2.57
1900 1989 4.493350 GCACGAGTTTGATGAATCGAAATG 59.507 41.667 1.67 0.00 38.50 2.32
1901 1990 4.393062 AGCACGAGTTTGATGAATCGAAAT 59.607 37.500 1.67 0.00 38.50 2.17
1902 1991 3.745975 AGCACGAGTTTGATGAATCGAAA 59.254 39.130 1.67 0.00 38.50 3.46
1903 1992 3.325870 AGCACGAGTTTGATGAATCGAA 58.674 40.909 1.67 0.00 38.50 3.71
1904 1993 2.959516 AGCACGAGTTTGATGAATCGA 58.040 42.857 1.67 0.00 38.50 3.59
1905 1994 3.729526 AAGCACGAGTTTGATGAATCG 57.270 42.857 0.00 0.00 40.86 3.34
1906 1995 9.214953 CTTATAAAAGCACGAGTTTGATGAATC 57.785 33.333 0.00 0.00 0.00 2.52
1907 1996 8.730680 ACTTATAAAAGCACGAGTTTGATGAAT 58.269 29.630 0.00 0.00 36.05 2.57
1908 1997 8.094798 ACTTATAAAAGCACGAGTTTGATGAA 57.905 30.769 0.00 0.00 36.05 2.57
1909 1998 7.667043 ACTTATAAAAGCACGAGTTTGATGA 57.333 32.000 0.00 0.00 36.05 2.92
1910 1999 8.656849 ACTACTTATAAAAGCACGAGTTTGATG 58.343 33.333 0.00 0.00 36.05 3.07
1911 2000 8.656849 CACTACTTATAAAAGCACGAGTTTGAT 58.343 33.333 0.00 0.00 36.05 2.57
1912 2001 7.117236 CCACTACTTATAAAAGCACGAGTTTGA 59.883 37.037 0.00 0.00 36.05 2.69
1913 2002 7.095355 ACCACTACTTATAAAAGCACGAGTTTG 60.095 37.037 0.00 0.00 36.05 2.93
1914 2003 6.932960 ACCACTACTTATAAAAGCACGAGTTT 59.067 34.615 0.00 0.00 36.05 2.66
1915 2004 6.461640 ACCACTACTTATAAAAGCACGAGTT 58.538 36.000 0.00 0.00 36.05 3.01
1916 2005 6.034161 ACCACTACTTATAAAAGCACGAGT 57.966 37.500 0.00 0.00 36.05 4.18
1917 2006 7.478322 TCTACCACTACTTATAAAAGCACGAG 58.522 38.462 0.00 0.00 36.05 4.18
1918 2007 7.395190 TCTACCACTACTTATAAAAGCACGA 57.605 36.000 0.00 0.00 36.05 4.35
1919 2008 8.540492 CAATCTACCACTACTTATAAAAGCACG 58.460 37.037 0.00 0.00 36.05 5.34
1920 2009 9.379791 ACAATCTACCACTACTTATAAAAGCAC 57.620 33.333 0.00 0.00 36.05 4.40
1930 2019 9.708092 GAAGAAAACTACAATCTACCACTACTT 57.292 33.333 0.00 0.00 0.00 2.24
1931 2020 9.091220 AGAAGAAAACTACAATCTACCACTACT 57.909 33.333 0.00 0.00 0.00 2.57
1932 2021 9.708092 AAGAAGAAAACTACAATCTACCACTAC 57.292 33.333 0.00 0.00 0.00 2.73
1933 2022 9.706691 CAAGAAGAAAACTACAATCTACCACTA 57.293 33.333 0.00 0.00 0.00 2.74
1934 2023 8.429641 TCAAGAAGAAAACTACAATCTACCACT 58.570 33.333 0.00 0.00 0.00 4.00
1935 2024 8.603242 TCAAGAAGAAAACTACAATCTACCAC 57.397 34.615 0.00 0.00 0.00 4.16
1936 2025 9.621629 TTTCAAGAAGAAAACTACAATCTACCA 57.378 29.630 0.00 0.00 43.00 3.25
1958 2047 9.892130 GGAGAGGAAACTTATATCTCTTTTTCA 57.108 33.333 0.00 0.00 44.43 2.69
1960 2049 9.898152 CAGGAGAGGAAACTTATATCTCTTTTT 57.102 33.333 0.00 0.00 44.43 1.94
1961 2050 9.273137 TCAGGAGAGGAAACTTATATCTCTTTT 57.727 33.333 0.00 0.00 44.43 2.27
1962 2051 8.846423 TCAGGAGAGGAAACTTATATCTCTTT 57.154 34.615 0.00 0.00 44.43 2.52
1963 2052 8.869109 CATCAGGAGAGGAAACTTATATCTCTT 58.131 37.037 0.00 0.00 44.43 2.85
1964 2053 8.010105 ACATCAGGAGAGGAAACTTATATCTCT 58.990 37.037 0.00 0.00 44.43 3.10
1965 2054 8.189119 ACATCAGGAGAGGAAACTTATATCTC 57.811 38.462 0.00 0.00 44.43 2.75
1966 2055 8.560124 AACATCAGGAGAGGAAACTTATATCT 57.440 34.615 0.00 0.00 44.43 1.98
1970 2059 9.620259 GAAATAACATCAGGAGAGGAAACTTAT 57.380 33.333 0.00 0.00 44.43 1.73
1971 2060 8.602424 TGAAATAACATCAGGAGAGGAAACTTA 58.398 33.333 0.00 0.00 44.43 2.24
1972 2061 7.461749 TGAAATAACATCAGGAGAGGAAACTT 58.538 34.615 0.00 0.00 44.43 2.66
1974 2063 7.687941 TTGAAATAACATCAGGAGAGGAAAC 57.312 36.000 0.00 0.00 0.00 2.78
1975 2064 8.704849 TTTTGAAATAACATCAGGAGAGGAAA 57.295 30.769 0.00 0.00 0.00 3.13
1976 2065 8.704849 TTTTTGAAATAACATCAGGAGAGGAA 57.295 30.769 0.00 0.00 0.00 3.36
1998 2087 6.717084 TGGGTTCCAAAAACAAGAACATTTTT 59.283 30.769 4.69 0.00 41.32 1.94
1999 2088 6.241645 TGGGTTCCAAAAACAAGAACATTTT 58.758 32.000 4.69 0.00 41.32 1.82
2000 2089 5.810095 TGGGTTCCAAAAACAAGAACATTT 58.190 33.333 4.69 0.00 41.32 2.32
2001 2090 5.428184 TGGGTTCCAAAAACAAGAACATT 57.572 34.783 4.69 0.00 41.32 2.71
2002 2091 5.367302 CATGGGTTCCAAAAACAAGAACAT 58.633 37.500 4.69 0.00 41.32 2.71
2003 2092 4.764172 CATGGGTTCCAAAAACAAGAACA 58.236 39.130 4.69 0.00 41.32 3.18
2004 2093 3.559655 GCATGGGTTCCAAAAACAAGAAC 59.440 43.478 0.00 0.00 36.95 3.01
2005 2094 3.198635 TGCATGGGTTCCAAAAACAAGAA 59.801 39.130 0.00 0.00 36.95 2.52
2006 2095 2.768527 TGCATGGGTTCCAAAAACAAGA 59.231 40.909 0.00 0.00 36.95 3.02
2007 2096 3.191078 TGCATGGGTTCCAAAAACAAG 57.809 42.857 0.00 0.00 36.95 3.16
2008 2097 3.474600 CATGCATGGGTTCCAAAAACAA 58.525 40.909 19.40 0.00 36.95 2.83
2009 2098 2.224475 CCATGCATGGGTTCCAAAAACA 60.224 45.455 34.31 0.00 44.31 2.83
2010 2099 2.425539 CCATGCATGGGTTCCAAAAAC 58.574 47.619 34.31 0.00 44.31 2.43
2011 2100 2.855209 CCATGCATGGGTTCCAAAAA 57.145 45.000 34.31 0.00 44.31 1.94
2022 2111 1.536940 TGAGACAACACCCATGCATG 58.463 50.000 20.19 20.19 0.00 4.06
2023 2112 2.494471 CAATGAGACAACACCCATGCAT 59.506 45.455 0.00 0.00 0.00 3.96
2024 2113 1.887854 CAATGAGACAACACCCATGCA 59.112 47.619 0.00 0.00 0.00 3.96
2025 2114 1.888512 ACAATGAGACAACACCCATGC 59.111 47.619 0.00 0.00 0.00 4.06
2026 2115 3.148412 TCACAATGAGACAACACCCATG 58.852 45.455 0.00 0.00 0.00 3.66
2027 2116 3.507162 TCACAATGAGACAACACCCAT 57.493 42.857 0.00 0.00 0.00 4.00
2028 2117 3.507162 ATCACAATGAGACAACACCCA 57.493 42.857 0.00 0.00 0.00 4.51
2029 2118 4.853924 AAATCACAATGAGACAACACCC 57.146 40.909 0.00 0.00 0.00 4.61
2030 2119 7.383102 AGATAAATCACAATGAGACAACACC 57.617 36.000 0.00 0.00 0.00 4.16
2034 2123 9.049523 GCAGATAGATAAATCACAATGAGACAA 57.950 33.333 0.00 0.00 0.00 3.18
2035 2124 7.658982 GGCAGATAGATAAATCACAATGAGACA 59.341 37.037 0.00 0.00 0.00 3.41
2036 2125 7.877097 AGGCAGATAGATAAATCACAATGAGAC 59.123 37.037 0.00 0.00 0.00 3.36
2037 2126 7.971201 AGGCAGATAGATAAATCACAATGAGA 58.029 34.615 0.00 0.00 0.00 3.27
2038 2127 7.333921 GGAGGCAGATAGATAAATCACAATGAG 59.666 40.741 0.00 0.00 0.00 2.90
2039 2128 7.164122 GGAGGCAGATAGATAAATCACAATGA 58.836 38.462 0.00 0.00 0.00 2.57
2040 2129 6.373774 GGGAGGCAGATAGATAAATCACAATG 59.626 42.308 0.00 0.00 0.00 2.82
2041 2130 6.479884 GGGAGGCAGATAGATAAATCACAAT 58.520 40.000 0.00 0.00 0.00 2.71
2042 2131 5.221925 GGGGAGGCAGATAGATAAATCACAA 60.222 44.000 0.00 0.00 0.00 3.33
2043 2132 4.287067 GGGGAGGCAGATAGATAAATCACA 59.713 45.833 0.00 0.00 0.00 3.58
2044 2133 4.323868 GGGGGAGGCAGATAGATAAATCAC 60.324 50.000 0.00 0.00 0.00 3.06
2045 2134 3.846588 GGGGGAGGCAGATAGATAAATCA 59.153 47.826 0.00 0.00 0.00 2.57
2046 2135 3.846588 TGGGGGAGGCAGATAGATAAATC 59.153 47.826 0.00 0.00 0.00 2.17
2047 2136 3.886938 TGGGGGAGGCAGATAGATAAAT 58.113 45.455 0.00 0.00 0.00 1.40
2048 2137 3.360740 TGGGGGAGGCAGATAGATAAA 57.639 47.619 0.00 0.00 0.00 1.40
2049 2138 2.979678 GTTGGGGGAGGCAGATAGATAA 59.020 50.000 0.00 0.00 0.00 1.75
2050 2139 2.182312 AGTTGGGGGAGGCAGATAGATA 59.818 50.000 0.00 0.00 0.00 1.98
2051 2140 1.061033 AGTTGGGGGAGGCAGATAGAT 60.061 52.381 0.00 0.00 0.00 1.98
2052 2141 0.343372 AGTTGGGGGAGGCAGATAGA 59.657 55.000 0.00 0.00 0.00 1.98
2053 2142 0.761802 GAGTTGGGGGAGGCAGATAG 59.238 60.000 0.00 0.00 0.00 2.08
2054 2143 1.048724 CGAGTTGGGGGAGGCAGATA 61.049 60.000 0.00 0.00 0.00 1.98
2055 2144 2.370445 CGAGTTGGGGGAGGCAGAT 61.370 63.158 0.00 0.00 0.00 2.90
2056 2145 3.003173 CGAGTTGGGGGAGGCAGA 61.003 66.667 0.00 0.00 0.00 4.26
2057 2146 3.003173 TCGAGTTGGGGGAGGCAG 61.003 66.667 0.00 0.00 0.00 4.85
2058 2147 2.449967 TACTCGAGTTGGGGGAGGCA 62.450 60.000 25.44 0.00 32.11 4.75
2059 2148 1.262640 TTACTCGAGTTGGGGGAGGC 61.263 60.000 25.44 0.00 32.11 4.70
2060 2149 1.413077 GATTACTCGAGTTGGGGGAGG 59.587 57.143 25.44 0.00 32.11 4.30
2061 2150 2.389715 AGATTACTCGAGTTGGGGGAG 58.610 52.381 25.44 0.00 0.00 4.30
2062 2151 2.544844 AGATTACTCGAGTTGGGGGA 57.455 50.000 25.44 0.40 0.00 4.81
2063 2152 3.055385 TCAAAGATTACTCGAGTTGGGGG 60.055 47.826 25.44 8.07 0.00 5.40
2064 2153 4.184629 CTCAAAGATTACTCGAGTTGGGG 58.815 47.826 25.44 0.00 0.00 4.96
2065 2154 3.619038 GCTCAAAGATTACTCGAGTTGGG 59.381 47.826 25.44 15.58 0.00 4.12
2066 2155 3.619038 GGCTCAAAGATTACTCGAGTTGG 59.381 47.826 25.44 2.38 0.00 3.77
2067 2156 4.499183 AGGCTCAAAGATTACTCGAGTTG 58.501 43.478 25.44 14.73 0.00 3.16
2068 2157 4.810191 AGGCTCAAAGATTACTCGAGTT 57.190 40.909 25.44 6.39 0.00 3.01
2069 2158 4.810191 AAGGCTCAAAGATTACTCGAGT 57.190 40.909 23.66 23.66 0.00 4.18
2070 2159 4.735822 CGTAAGGCTCAAAGATTACTCGAG 59.264 45.833 11.84 11.84 0.00 4.04
2071 2160 4.669318 CGTAAGGCTCAAAGATTACTCGA 58.331 43.478 0.00 0.00 0.00 4.04
2095 2184 7.821846 TGAATTACTTTATTTGATTGGGGCAAC 59.178 33.333 0.00 0.00 0.00 4.17
2096 2185 7.911651 TGAATTACTTTATTTGATTGGGGCAA 58.088 30.769 0.00 0.00 0.00 4.52
2097 2186 7.487822 TGAATTACTTTATTTGATTGGGGCA 57.512 32.000 0.00 0.00 0.00 5.36
2098 2187 8.664798 GTTTGAATTACTTTATTTGATTGGGGC 58.335 33.333 0.00 0.00 0.00 5.80
2099 2188 9.942850 AGTTTGAATTACTTTATTTGATTGGGG 57.057 29.630 0.00 0.00 0.00 4.96
2149 2238 9.280456 ACATAATCCGGGAATAATATAAGGTCT 57.720 33.333 0.00 0.00 0.00 3.85
2150 2239 9.543783 GACATAATCCGGGAATAATATAAGGTC 57.456 37.037 0.00 0.00 0.00 3.85
2151 2240 9.053472 TGACATAATCCGGGAATAATATAAGGT 57.947 33.333 0.00 0.00 0.00 3.50
2186 2275 9.472361 GTGTCTCTTGTTACATCTGTAGTTTTA 57.528 33.333 0.00 0.00 0.00 1.52
2187 2276 8.204836 AGTGTCTCTTGTTACATCTGTAGTTTT 58.795 33.333 0.00 0.00 0.00 2.43
2188 2277 7.727181 AGTGTCTCTTGTTACATCTGTAGTTT 58.273 34.615 0.00 0.00 0.00 2.66
2189 2278 7.291411 AGTGTCTCTTGTTACATCTGTAGTT 57.709 36.000 0.00 0.00 0.00 2.24
2190 2279 6.902771 AGTGTCTCTTGTTACATCTGTAGT 57.097 37.500 0.00 0.00 0.00 2.73
2191 2280 7.817641 TGTAGTGTCTCTTGTTACATCTGTAG 58.182 38.462 0.00 0.00 0.00 2.74
2192 2281 7.754851 TGTAGTGTCTCTTGTTACATCTGTA 57.245 36.000 0.00 0.00 0.00 2.74
2193 2282 6.650427 TGTAGTGTCTCTTGTTACATCTGT 57.350 37.500 0.00 0.00 0.00 3.41
2194 2283 7.946655 TTTGTAGTGTCTCTTGTTACATCTG 57.053 36.000 0.00 0.00 0.00 2.90
2195 2284 8.958119 TTTTTGTAGTGTCTCTTGTTACATCT 57.042 30.769 0.00 0.00 0.00 2.90
2198 2287 9.168451 TGAATTTTTGTAGTGTCTCTTGTTACA 57.832 29.630 0.00 0.00 0.00 2.41
2199 2288 9.997482 TTGAATTTTTGTAGTGTCTCTTGTTAC 57.003 29.630 0.00 0.00 0.00 2.50
2201 2290 9.353999 GTTTGAATTTTTGTAGTGTCTCTTGTT 57.646 29.630 0.00 0.00 0.00 2.83
2202 2291 7.696453 CGTTTGAATTTTTGTAGTGTCTCTTGT 59.304 33.333 0.00 0.00 0.00 3.16
2203 2292 7.908082 TCGTTTGAATTTTTGTAGTGTCTCTTG 59.092 33.333 0.00 0.00 0.00 3.02
2204 2293 7.981142 TCGTTTGAATTTTTGTAGTGTCTCTT 58.019 30.769 0.00 0.00 0.00 2.85
2205 2294 7.548196 TCGTTTGAATTTTTGTAGTGTCTCT 57.452 32.000 0.00 0.00 0.00 3.10
2206 2295 7.534239 GGATCGTTTGAATTTTTGTAGTGTCTC 59.466 37.037 0.00 0.00 0.00 3.36
2207 2296 7.012894 TGGATCGTTTGAATTTTTGTAGTGTCT 59.987 33.333 0.00 0.00 0.00 3.41
2208 2297 7.136119 TGGATCGTTTGAATTTTTGTAGTGTC 58.864 34.615 0.00 0.00 0.00 3.67
2209 2298 7.033530 TGGATCGTTTGAATTTTTGTAGTGT 57.966 32.000 0.00 0.00 0.00 3.55
2210 2299 7.807433 TGATGGATCGTTTGAATTTTTGTAGTG 59.193 33.333 0.00 0.00 0.00 2.74
2211 2300 7.881142 TGATGGATCGTTTGAATTTTTGTAGT 58.119 30.769 0.00 0.00 0.00 2.73
2212 2301 8.800972 CATGATGGATCGTTTGAATTTTTGTAG 58.199 33.333 0.00 0.00 0.00 2.74
2213 2302 7.758980 CCATGATGGATCGTTTGAATTTTTGTA 59.241 33.333 5.27 0.00 40.96 2.41
2214 2303 6.591062 CCATGATGGATCGTTTGAATTTTTGT 59.409 34.615 5.27 0.00 40.96 2.83
2215 2304 6.812656 TCCATGATGGATCGTTTGAATTTTTG 59.187 34.615 10.75 0.00 42.67 2.44
2216 2305 6.934056 TCCATGATGGATCGTTTGAATTTTT 58.066 32.000 10.75 0.00 42.67 1.94
2217 2306 6.528537 TCCATGATGGATCGTTTGAATTTT 57.471 33.333 10.75 0.00 42.67 1.82
2230 2319 3.884693 CGTCATCCAAATTCCATGATGGA 59.115 43.478 10.75 10.75 46.61 3.41
2231 2320 3.884693 TCGTCATCCAAATTCCATGATGG 59.115 43.478 4.74 4.74 39.43 3.51
2232 2321 5.472478 AGATCGTCATCCAAATTCCATGATG 59.528 40.000 0.00 6.94 35.63 3.07
2233 2322 5.628130 AGATCGTCATCCAAATTCCATGAT 58.372 37.500 0.00 0.00 0.00 2.45
2234 2323 5.039920 AGATCGTCATCCAAATTCCATGA 57.960 39.130 0.00 0.00 0.00 3.07
2235 2324 4.818005 TGAGATCGTCATCCAAATTCCATG 59.182 41.667 0.00 0.00 0.00 3.66
2236 2325 5.039920 TGAGATCGTCATCCAAATTCCAT 57.960 39.130 0.00 0.00 0.00 3.41
2237 2326 4.445453 CTGAGATCGTCATCCAAATTCCA 58.555 43.478 0.00 0.00 33.51 3.53
2238 2327 3.812053 CCTGAGATCGTCATCCAAATTCC 59.188 47.826 0.00 0.00 33.51 3.01
2239 2328 4.697514 TCCTGAGATCGTCATCCAAATTC 58.302 43.478 0.00 0.00 33.51 2.17
2240 2329 4.760530 TCCTGAGATCGTCATCCAAATT 57.239 40.909 0.00 0.00 33.51 1.82
2241 2330 4.446371 GTTCCTGAGATCGTCATCCAAAT 58.554 43.478 0.00 0.00 33.51 2.32
2242 2331 3.676049 CGTTCCTGAGATCGTCATCCAAA 60.676 47.826 0.00 0.00 33.51 3.28
2243 2332 2.159240 CGTTCCTGAGATCGTCATCCAA 60.159 50.000 0.00 0.00 33.51 3.53
2244 2333 1.405463 CGTTCCTGAGATCGTCATCCA 59.595 52.381 0.00 0.00 33.51 3.41
2245 2334 1.405821 ACGTTCCTGAGATCGTCATCC 59.594 52.381 0.00 0.00 43.20 3.51
2246 2335 2.853731 ACGTTCCTGAGATCGTCATC 57.146 50.000 0.00 0.00 43.20 2.92
2251 2340 0.523546 CCGTGACGTTCCTGAGATCG 60.524 60.000 3.64 0.00 40.33 3.69
2252 2341 0.809385 TCCGTGACGTTCCTGAGATC 59.191 55.000 3.64 0.00 0.00 2.75
2253 2342 1.475403 ATCCGTGACGTTCCTGAGAT 58.525 50.000 3.64 0.00 0.00 2.75
2254 2343 2.118313 TATCCGTGACGTTCCTGAGA 57.882 50.000 3.64 0.00 0.00 3.27
2255 2344 2.543861 CCATATCCGTGACGTTCCTGAG 60.544 54.545 3.64 0.00 0.00 3.35
2256 2345 1.407618 CCATATCCGTGACGTTCCTGA 59.592 52.381 3.64 0.00 0.00 3.86
2257 2346 1.136305 ACCATATCCGTGACGTTCCTG 59.864 52.381 3.64 0.00 0.00 3.86
2258 2347 1.481871 ACCATATCCGTGACGTTCCT 58.518 50.000 3.64 0.00 0.00 3.36
2259 2348 2.199236 GAACCATATCCGTGACGTTCC 58.801 52.381 3.64 0.00 0.00 3.62
2260 2349 1.850441 CGAACCATATCCGTGACGTTC 59.150 52.381 3.64 0.00 0.00 3.95
2261 2350 1.203052 ACGAACCATATCCGTGACGTT 59.797 47.619 3.64 0.00 35.02 3.99
2262 2351 0.813184 ACGAACCATATCCGTGACGT 59.187 50.000 3.64 0.00 35.02 4.34
2263 2352 1.474017 GACGAACCATATCCGTGACG 58.526 55.000 0.00 0.00 36.60 4.35
2264 2353 1.407979 AGGACGAACCATATCCGTGAC 59.592 52.381 0.00 0.00 42.04 3.67
2265 2354 1.771565 AGGACGAACCATATCCGTGA 58.228 50.000 0.00 0.00 42.04 4.35
2266 2355 3.936372 ATAGGACGAACCATATCCGTG 57.064 47.619 0.00 0.00 42.04 4.94
2267 2356 7.058525 TCATATATAGGACGAACCATATCCGT 58.941 38.462 0.00 0.00 42.04 4.69
2268 2357 7.506328 TCATATATAGGACGAACCATATCCG 57.494 40.000 0.00 0.00 42.04 4.18
2269 2358 9.078990 TCATCATATATAGGACGAACCATATCC 57.921 37.037 0.00 0.00 42.04 2.59
2272 2361 9.078990 GGATCATCATATATAGGACGAACCATA 57.921 37.037 12.96 0.00 42.04 2.74
2273 2362 7.015682 GGGATCATCATATATAGGACGAACCAT 59.984 40.741 17.69 0.00 42.04 3.55
2274 2363 6.323996 GGGATCATCATATATAGGACGAACCA 59.676 42.308 17.69 0.00 42.04 3.67
2275 2364 6.323996 TGGGATCATCATATATAGGACGAACC 59.676 42.308 10.28 10.28 39.35 3.62
2276 2365 7.348080 TGGGATCATCATATATAGGACGAAC 57.652 40.000 0.00 0.00 0.00 3.95
2277 2366 7.971368 TTGGGATCATCATATATAGGACGAA 57.029 36.000 0.00 0.00 0.00 3.85
2278 2367 7.565029 ACATTGGGATCATCATATATAGGACGA 59.435 37.037 0.00 0.00 0.00 4.20
2279 2368 7.730084 ACATTGGGATCATCATATATAGGACG 58.270 38.462 0.00 0.00 0.00 4.79
2280 2369 8.708378 TGACATTGGGATCATCATATATAGGAC 58.292 37.037 0.00 0.00 0.00 3.85
2281 2370 8.858944 TGACATTGGGATCATCATATATAGGA 57.141 34.615 0.00 0.00 0.00 2.94
2282 2371 9.722184 GATGACATTGGGATCATCATATATAGG 57.278 37.037 8.91 0.00 46.98 2.57
2292 2381 4.734843 TCCATGATGACATTGGGATCAT 57.265 40.909 6.36 6.78 37.31 2.45
2293 2382 4.734843 ATCCATGATGACATTGGGATCA 57.265 40.909 6.36 3.23 35.66 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.