Multiple sequence alignment - TraesCS5D01G340900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G340900 chr5D 100.000 4400 0 0 1 4400 429282756 429287155 0.000000e+00 8126.0
1 TraesCS5D01G340900 chr5D 85.185 189 27 1 4075 4263 429286222 429286035 4.490000e-45 193.0
2 TraesCS5D01G340900 chr5D 85.185 189 27 1 3280 3467 429287018 429286830 4.490000e-45 193.0
3 TraesCS5D01G340900 chr5B 88.909 1623 105 20 792 2381 518468243 518469823 0.000000e+00 1930.0
4 TraesCS5D01G340900 chr5B 87.056 479 32 17 2796 3259 518470418 518470881 8.440000e-142 514.0
5 TraesCS5D01G340900 chr5B 81.568 472 76 6 1 468 526550380 526550844 3.210000e-101 379.0
6 TraesCS5D01G340900 chr5B 83.568 426 25 15 2380 2795 518469985 518470375 1.500000e-94 357.0
7 TraesCS5D01G340900 chr5B 78.992 476 86 11 3 474 425177793 425177328 3.300000e-81 313.0
8 TraesCS5D01G340900 chr5B 78.926 484 82 11 3 474 54508158 54507683 1.190000e-80 311.0
9 TraesCS5D01G340900 chr5B 93.902 164 9 1 473 635 518467481 518467644 3.400000e-61 246.0
10 TraesCS5D01G340900 chr5B 94.872 117 5 1 456 572 518445588 518445703 9.720000e-42 182.0
11 TraesCS5D01G340900 chr5B 100.000 29 0 0 609 637 396438942 396438970 2.000000e-03 54.7
12 TraesCS5D01G340900 chr5A 89.652 1179 83 17 893 2057 545052318 545053471 0.000000e+00 1465.0
13 TraesCS5D01G340900 chr5A 92.368 1022 47 15 2490 3488 545053691 545054704 0.000000e+00 1426.0
14 TraesCS5D01G340900 chr5A 86.864 472 42 9 3948 4400 545055071 545055541 1.090000e-140 510.0
15 TraesCS5D01G340900 chr5A 94.690 226 10 2 3489 3714 545054853 545055076 2.520000e-92 350.0
16 TraesCS5D01G340900 chr5A 92.105 190 13 2 2153 2341 545053475 545053663 2.610000e-67 267.0
17 TraesCS5D01G340900 chr3B 83.816 760 74 24 1450 2192 5363832 5364559 0.000000e+00 676.0
18 TraesCS5D01G340900 chr3B 81.568 472 74 7 1 468 5602266 5601804 1.160000e-100 377.0
19 TraesCS5D01G340900 chr3B 92.308 39 2 1 753 791 43045610 43045647 2.000000e-03 54.7
20 TraesCS5D01G340900 chr7D 83.054 478 70 4 1 474 230998496 230998026 1.460000e-114 424.0
21 TraesCS5D01G340900 chr7D 81.996 461 70 5 3 459 630507507 630507958 3.210000e-101 379.0
22 TraesCS5D01G340900 chr7D 81.549 439 75 6 3 437 568232982 568232546 1.500000e-94 357.0
23 TraesCS5D01G340900 chr7D 82.759 406 58 6 71 472 226461385 226460988 7.000000e-93 351.0
24 TraesCS5D01G340900 chr3A 81.667 540 53 23 1680 2192 7595682 7596202 1.470000e-109 407.0
25 TraesCS5D01G340900 chr1A 82.009 428 69 6 1 428 438651466 438651885 1.500000e-94 357.0
26 TraesCS5D01G340900 chr2B 81.757 444 62 10 3839 4264 646965913 646965471 1.950000e-93 353.0
27 TraesCS5D01G340900 chr2B 87.302 189 23 1 3280 3467 646965472 646965660 9.580000e-52 215.0
28 TraesCS5D01G340900 chr7B 77.190 548 93 17 3750 4266 115246921 115247467 1.550000e-74 291.0
29 TraesCS5D01G340900 chr7B 79.470 151 31 0 4114 4264 595792498 595792648 1.670000e-19 108.0
30 TraesCS5D01G340900 chr2D 84.783 230 29 6 3274 3499 576842123 576841896 4.430000e-55 226.0
31 TraesCS5D01G340900 chr2D 81.481 189 32 3 3281 3467 206245158 206245345 7.620000e-33 152.0
32 TraesCS5D01G340900 chr2D 85.714 119 17 0 4146 4264 206246228 206246346 4.620000e-25 126.0
33 TraesCS5D01G340900 chrUn 80.321 249 45 4 4013 4260 98197437 98197192 7.520000e-43 185.0
34 TraesCS5D01G340900 chrUn 82.514 183 29 3 3284 3465 98197193 98197373 1.640000e-34 158.0
35 TraesCS5D01G340900 chr6B 81.771 192 33 2 3277 3467 506837263 506837453 4.550000e-35 159.0
36 TraesCS5D01G340900 chr6B 82.105 190 31 3 3280 3467 702355640 702355828 4.550000e-35 159.0
37 TraesCS5D01G340900 chr6B 82.353 187 30 3 3280 3465 715683438 715683622 4.550000e-35 159.0
38 TraesCS5D01G340900 chr4B 94.872 39 1 1 753 791 192539542 192539505 4.750000e-05 60.2
39 TraesCS5D01G340900 chr3D 92.308 39 2 1 753 791 25970355 25970392 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G340900 chr5D 429282756 429287155 4399 False 8126.00 8126 100.00000 1 4400 1 chr5D.!!$F1 4399
1 TraesCS5D01G340900 chr5B 518467481 518470881 3400 False 761.75 1930 88.35875 473 3259 4 chr5B.!!$F4 2786
2 TraesCS5D01G340900 chr5A 545052318 545055541 3223 False 803.60 1465 91.13580 893 4400 5 chr5A.!!$F1 3507
3 TraesCS5D01G340900 chr3B 5363832 5364559 727 False 676.00 676 83.81600 1450 2192 1 chr3B.!!$F1 742
4 TraesCS5D01G340900 chr3A 7595682 7596202 520 False 407.00 407 81.66700 1680 2192 1 chr3A.!!$F1 512
5 TraesCS5D01G340900 chr7B 115246921 115247467 546 False 291.00 291 77.19000 3750 4266 1 chr7B.!!$F1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.031414 ATACCCCTAAGGACCAGCGT 60.031 55.0 0.00 0.0 39.89 5.07 F
1796 2272 0.034337 TCCCCGTTCTCGTTTTCCAG 59.966 55.0 0.00 0.0 35.01 3.86 F
2720 3409 0.187361 AGCTTGGGGTGGCAACTAAA 59.813 50.0 0.97 0.0 37.61 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2491 0.036858 TGGGAACGCATCAACGATGA 60.037 50.0 8.14 0.0 42.09 2.92 R
3315 4075 0.033208 ATGTGGTGGCAATTCCGGAT 60.033 50.0 4.15 0.0 37.80 4.18 R
3857 4769 0.035056 CGGAAGAGAAAGGCATGGGT 60.035 55.0 0.00 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.788672 CTCCCATACTGGAGTTGGC 57.211 57.895 0.00 0.00 45.76 4.52
21 22 0.181350 CTCCCATACTGGAGTTGGCC 59.819 60.000 0.00 0.00 45.76 5.36
22 23 0.253160 TCCCATACTGGAGTTGGCCT 60.253 55.000 3.32 0.00 40.96 5.19
23 24 0.107017 CCCATACTGGAGTTGGCCTG 60.107 60.000 3.32 0.00 40.96 4.85
24 25 0.911769 CCATACTGGAGTTGGCCTGA 59.088 55.000 3.32 0.00 40.96 3.86
25 26 1.492176 CCATACTGGAGTTGGCCTGAT 59.508 52.381 3.32 0.00 40.96 2.90
26 27 2.486191 CCATACTGGAGTTGGCCTGATC 60.486 54.545 3.32 0.00 40.96 2.92
27 28 2.254152 TACTGGAGTTGGCCTGATCT 57.746 50.000 3.32 0.00 0.00 2.75
28 29 1.366319 ACTGGAGTTGGCCTGATCTT 58.634 50.000 3.32 0.00 0.00 2.40
29 30 1.004044 ACTGGAGTTGGCCTGATCTTG 59.996 52.381 3.32 0.00 0.00 3.02
30 31 1.004044 CTGGAGTTGGCCTGATCTTGT 59.996 52.381 3.32 0.00 0.00 3.16
31 32 1.003580 TGGAGTTGGCCTGATCTTGTC 59.996 52.381 3.32 0.00 0.00 3.18
32 33 1.363744 GAGTTGGCCTGATCTTGTCG 58.636 55.000 3.32 0.00 0.00 4.35
33 34 0.976641 AGTTGGCCTGATCTTGTCGA 59.023 50.000 3.32 0.00 0.00 4.20
34 35 1.556911 AGTTGGCCTGATCTTGTCGAT 59.443 47.619 3.32 0.00 34.25 3.59
35 36 2.026822 AGTTGGCCTGATCTTGTCGATT 60.027 45.455 3.32 0.00 30.84 3.34
36 37 3.197766 AGTTGGCCTGATCTTGTCGATTA 59.802 43.478 3.32 0.00 30.84 1.75
37 38 3.179443 TGGCCTGATCTTGTCGATTAC 57.821 47.619 3.32 0.00 30.84 1.89
38 39 2.499693 TGGCCTGATCTTGTCGATTACA 59.500 45.455 3.32 0.00 35.88 2.41
39 40 3.126831 GGCCTGATCTTGTCGATTACAG 58.873 50.000 0.00 0.00 39.87 2.74
40 41 2.541762 GCCTGATCTTGTCGATTACAGC 59.458 50.000 0.00 0.00 39.87 4.40
41 42 3.126831 CCTGATCTTGTCGATTACAGCC 58.873 50.000 0.00 0.00 39.87 4.85
42 43 3.181471 CCTGATCTTGTCGATTACAGCCT 60.181 47.826 0.00 0.00 39.87 4.58
43 44 3.785486 TGATCTTGTCGATTACAGCCTG 58.215 45.455 0.00 0.00 39.87 4.85
44 45 3.447229 TGATCTTGTCGATTACAGCCTGA 59.553 43.478 0.00 0.00 39.87 3.86
45 46 3.953712 TCTTGTCGATTACAGCCTGAA 57.046 42.857 0.00 0.00 39.87 3.02
46 47 4.265904 TCTTGTCGATTACAGCCTGAAA 57.734 40.909 0.00 0.00 39.87 2.69
47 48 4.245660 TCTTGTCGATTACAGCCTGAAAG 58.754 43.478 0.00 0.00 39.87 2.62
48 49 3.678056 TGTCGATTACAGCCTGAAAGT 57.322 42.857 0.00 0.00 33.01 2.66
49 50 3.585862 TGTCGATTACAGCCTGAAAGTC 58.414 45.455 0.00 0.00 33.01 3.01
50 51 3.258372 TGTCGATTACAGCCTGAAAGTCT 59.742 43.478 0.00 0.00 33.01 3.24
51 52 4.246458 GTCGATTACAGCCTGAAAGTCTT 58.754 43.478 0.00 0.00 0.00 3.01
52 53 4.691216 GTCGATTACAGCCTGAAAGTCTTT 59.309 41.667 0.00 0.00 0.00 2.52
53 54 4.690748 TCGATTACAGCCTGAAAGTCTTTG 59.309 41.667 1.60 0.00 0.00 2.77
54 55 4.452455 CGATTACAGCCTGAAAGTCTTTGT 59.548 41.667 1.60 0.00 0.00 2.83
55 56 5.615544 CGATTACAGCCTGAAAGTCTTTGTG 60.616 44.000 1.60 0.00 0.00 3.33
56 57 1.678101 ACAGCCTGAAAGTCTTTGTGC 59.322 47.619 1.60 2.66 0.00 4.57
57 58 1.677576 CAGCCTGAAAGTCTTTGTGCA 59.322 47.619 1.60 0.00 0.00 4.57
58 59 1.678101 AGCCTGAAAGTCTTTGTGCAC 59.322 47.619 10.75 10.75 0.00 4.57
59 60 1.405105 GCCTGAAAGTCTTTGTGCACA 59.595 47.619 17.42 17.42 0.00 4.57
60 61 2.035066 GCCTGAAAGTCTTTGTGCACAT 59.965 45.455 22.39 2.89 0.00 3.21
61 62 3.253188 GCCTGAAAGTCTTTGTGCACATA 59.747 43.478 22.39 15.50 0.00 2.29
62 63 4.787598 CCTGAAAGTCTTTGTGCACATAC 58.212 43.478 22.39 18.37 0.00 2.39
63 64 4.320494 CCTGAAAGTCTTTGTGCACATACC 60.320 45.833 22.39 9.17 0.00 2.73
64 65 3.568007 TGAAAGTCTTTGTGCACATACCC 59.432 43.478 22.39 9.54 0.00 3.69
65 66 2.200373 AGTCTTTGTGCACATACCCC 57.800 50.000 22.39 8.07 0.00 4.95
66 67 1.705186 AGTCTTTGTGCACATACCCCT 59.295 47.619 22.39 10.29 0.00 4.79
67 68 2.910319 AGTCTTTGTGCACATACCCCTA 59.090 45.455 22.39 0.00 0.00 3.53
68 69 3.329520 AGTCTTTGTGCACATACCCCTAA 59.670 43.478 22.39 9.05 0.00 2.69
69 70 3.689649 GTCTTTGTGCACATACCCCTAAG 59.310 47.826 22.39 18.39 0.00 2.18
70 71 2.799126 TTGTGCACATACCCCTAAGG 57.201 50.000 22.39 0.00 43.78 2.69
71 72 1.959710 TGTGCACATACCCCTAAGGA 58.040 50.000 17.42 0.00 39.89 3.36
72 73 1.557832 TGTGCACATACCCCTAAGGAC 59.442 52.381 17.42 0.00 39.89 3.85
73 74 1.134189 GTGCACATACCCCTAAGGACC 60.134 57.143 13.17 0.00 39.89 4.46
74 75 1.209621 GCACATACCCCTAAGGACCA 58.790 55.000 0.00 0.00 39.89 4.02
75 76 1.141053 GCACATACCCCTAAGGACCAG 59.859 57.143 0.00 0.00 39.89 4.00
76 77 1.141053 CACATACCCCTAAGGACCAGC 59.859 57.143 0.00 0.00 39.89 4.85
77 78 0.393077 CATACCCCTAAGGACCAGCG 59.607 60.000 0.00 0.00 39.89 5.18
78 79 0.031414 ATACCCCTAAGGACCAGCGT 60.031 55.000 0.00 0.00 39.89 5.07
79 80 0.252375 TACCCCTAAGGACCAGCGTT 60.252 55.000 0.00 0.00 39.89 4.84
80 81 1.221021 CCCCTAAGGACCAGCGTTC 59.779 63.158 0.00 0.00 38.24 3.95
81 82 1.153628 CCCTAAGGACCAGCGTTCG 60.154 63.158 0.00 0.00 33.47 3.95
82 83 1.601419 CCCTAAGGACCAGCGTTCGA 61.601 60.000 0.00 0.00 33.47 3.71
83 84 0.179134 CCTAAGGACCAGCGTTCGAG 60.179 60.000 0.00 0.00 0.00 4.04
84 85 0.802607 CTAAGGACCAGCGTTCGAGC 60.803 60.000 0.00 0.00 37.41 5.03
85 86 2.537792 TAAGGACCAGCGTTCGAGCG 62.538 60.000 17.91 17.91 43.00 5.03
114 115 2.620251 TCGCCATCGAATCCTTGAAT 57.380 45.000 0.00 0.00 42.44 2.57
115 116 2.483876 TCGCCATCGAATCCTTGAATC 58.516 47.619 0.00 0.00 42.44 2.52
116 117 1.193203 CGCCATCGAATCCTTGAATCG 59.807 52.381 0.00 0.00 36.45 3.34
117 118 2.483876 GCCATCGAATCCTTGAATCGA 58.516 47.619 6.70 6.70 45.77 3.59
122 123 4.918810 TCGAATCCTTGAATCGATCTGA 57.081 40.909 0.00 0.00 38.75 3.27
123 124 5.262588 TCGAATCCTTGAATCGATCTGAA 57.737 39.130 0.00 0.00 38.75 3.02
124 125 5.284864 TCGAATCCTTGAATCGATCTGAAG 58.715 41.667 0.00 1.28 38.75 3.02
125 126 5.067805 TCGAATCCTTGAATCGATCTGAAGA 59.932 40.000 0.00 0.00 38.75 2.87
126 127 5.750547 CGAATCCTTGAATCGATCTGAAGAA 59.249 40.000 0.00 0.00 37.16 2.52
127 128 6.292061 CGAATCCTTGAATCGATCTGAAGAAC 60.292 42.308 0.00 0.00 37.16 3.01
128 129 4.759782 TCCTTGAATCGATCTGAAGAACC 58.240 43.478 0.00 0.00 0.00 3.62
129 130 4.467795 TCCTTGAATCGATCTGAAGAACCT 59.532 41.667 0.00 0.00 0.00 3.50
130 131 4.569966 CCTTGAATCGATCTGAAGAACCTG 59.430 45.833 0.00 0.00 0.00 4.00
131 132 5.405935 TTGAATCGATCTGAAGAACCTGA 57.594 39.130 0.00 0.00 0.00 3.86
132 133 4.748892 TGAATCGATCTGAAGAACCTGAC 58.251 43.478 0.00 0.00 0.00 3.51
133 134 4.220602 TGAATCGATCTGAAGAACCTGACA 59.779 41.667 0.00 0.00 0.00 3.58
134 135 3.577649 TCGATCTGAAGAACCTGACAC 57.422 47.619 0.00 0.00 0.00 3.67
135 136 2.231478 TCGATCTGAAGAACCTGACACC 59.769 50.000 0.00 0.00 0.00 4.16
136 137 2.029020 CGATCTGAAGAACCTGACACCA 60.029 50.000 0.00 0.00 0.00 4.17
137 138 3.554960 CGATCTGAAGAACCTGACACCAA 60.555 47.826 0.00 0.00 0.00 3.67
138 139 3.924114 TCTGAAGAACCTGACACCAAA 57.076 42.857 0.00 0.00 0.00 3.28
139 140 4.437682 TCTGAAGAACCTGACACCAAAT 57.562 40.909 0.00 0.00 0.00 2.32
140 141 4.389374 TCTGAAGAACCTGACACCAAATC 58.611 43.478 0.00 0.00 0.00 2.17
141 142 4.103153 TCTGAAGAACCTGACACCAAATCT 59.897 41.667 0.00 0.00 0.00 2.40
142 143 4.389374 TGAAGAACCTGACACCAAATCTC 58.611 43.478 0.00 0.00 0.00 2.75
143 144 3.045601 AGAACCTGACACCAAATCTCG 57.954 47.619 0.00 0.00 0.00 4.04
144 145 1.464997 GAACCTGACACCAAATCTCGC 59.535 52.381 0.00 0.00 0.00 5.03
145 146 0.687354 ACCTGACACCAAATCTCGCT 59.313 50.000 0.00 0.00 0.00 4.93
146 147 1.081892 CCTGACACCAAATCTCGCTG 58.918 55.000 0.00 0.00 0.00 5.18
147 148 1.609061 CCTGACACCAAATCTCGCTGT 60.609 52.381 0.00 0.00 0.00 4.40
148 149 2.146342 CTGACACCAAATCTCGCTGTT 58.854 47.619 0.00 0.00 0.00 3.16
149 150 1.872952 TGACACCAAATCTCGCTGTTG 59.127 47.619 0.00 0.00 0.00 3.33
150 151 0.593128 ACACCAAATCTCGCTGTTGC 59.407 50.000 0.00 0.00 0.00 4.17
173 174 3.502237 GCACGACGAGAAACCCTAA 57.498 52.632 0.00 0.00 0.00 2.69
174 175 2.005971 GCACGACGAGAAACCCTAAT 57.994 50.000 0.00 0.00 0.00 1.73
175 176 3.155093 GCACGACGAGAAACCCTAATA 57.845 47.619 0.00 0.00 0.00 0.98
176 177 3.514645 GCACGACGAGAAACCCTAATAA 58.485 45.455 0.00 0.00 0.00 1.40
177 178 3.305361 GCACGACGAGAAACCCTAATAAC 59.695 47.826 0.00 0.00 0.00 1.89
178 179 3.861689 CACGACGAGAAACCCTAATAACC 59.138 47.826 0.00 0.00 0.00 2.85
179 180 3.118992 ACGACGAGAAACCCTAATAACCC 60.119 47.826 0.00 0.00 0.00 4.11
180 181 3.739209 CGACGAGAAACCCTAATAACCCC 60.739 52.174 0.00 0.00 0.00 4.95
181 182 2.169144 ACGAGAAACCCTAATAACCCCG 59.831 50.000 0.00 0.00 0.00 5.73
182 183 2.431782 CGAGAAACCCTAATAACCCCGA 59.568 50.000 0.00 0.00 0.00 5.14
183 184 3.739209 CGAGAAACCCTAATAACCCCGAC 60.739 52.174 0.00 0.00 0.00 4.79
184 185 2.169144 AGAAACCCTAATAACCCCGACG 59.831 50.000 0.00 0.00 0.00 5.12
185 186 0.178767 AACCCTAATAACCCCGACGC 59.821 55.000 0.00 0.00 0.00 5.19
186 187 0.688749 ACCCTAATAACCCCGACGCT 60.689 55.000 0.00 0.00 0.00 5.07
187 188 0.466963 CCCTAATAACCCCGACGCTT 59.533 55.000 0.00 0.00 0.00 4.68
188 189 1.539712 CCCTAATAACCCCGACGCTTC 60.540 57.143 0.00 0.00 0.00 3.86
189 190 1.484356 CTAATAACCCCGACGCTTCG 58.516 55.000 5.49 5.49 45.44 3.79
194 195 4.194720 CCCCGACGCTTCGAGGAG 62.195 72.222 14.93 0.00 45.82 3.69
198 199 2.202676 GACGCTTCGAGGAGCTGG 60.203 66.667 7.47 0.00 40.52 4.85
199 200 4.443266 ACGCTTCGAGGAGCTGGC 62.443 66.667 7.47 0.00 40.52 4.85
200 201 4.441695 CGCTTCGAGGAGCTGGCA 62.442 66.667 7.47 0.00 40.52 4.92
201 202 2.511145 GCTTCGAGGAGCTGGCAG 60.511 66.667 10.94 10.94 39.57 4.85
202 203 3.011635 GCTTCGAGGAGCTGGCAGA 62.012 63.158 20.86 0.00 39.57 4.26
203 204 1.593787 CTTCGAGGAGCTGGCAGAA 59.406 57.895 20.86 0.32 0.00 3.02
204 205 0.036952 CTTCGAGGAGCTGGCAGAAA 60.037 55.000 20.86 0.00 0.00 2.52
205 206 0.615331 TTCGAGGAGCTGGCAGAAAT 59.385 50.000 20.86 2.34 0.00 2.17
206 207 0.176680 TCGAGGAGCTGGCAGAAATC 59.823 55.000 20.86 12.21 0.00 2.17
207 208 0.177604 CGAGGAGCTGGCAGAAATCT 59.822 55.000 20.86 5.22 0.00 2.40
208 209 1.666054 GAGGAGCTGGCAGAAATCTG 58.334 55.000 20.86 6.05 46.40 2.90
209 210 0.990374 AGGAGCTGGCAGAAATCTGT 59.010 50.000 20.86 2.04 45.45 3.41
210 211 1.093159 GGAGCTGGCAGAAATCTGTG 58.907 55.000 20.86 4.57 45.45 3.66
211 212 0.450983 GAGCTGGCAGAAATCTGTGC 59.549 55.000 20.86 12.67 45.45 4.57
215 216 4.301505 GCAGAAATCTGTGCCGGA 57.698 55.556 5.05 0.00 45.45 5.14
216 217 2.093216 GCAGAAATCTGTGCCGGAG 58.907 57.895 5.05 0.00 45.45 4.63
217 218 1.986575 GCAGAAATCTGTGCCGGAGC 61.987 60.000 5.05 0.00 45.45 4.70
218 219 0.392193 CAGAAATCTGTGCCGGAGCT 60.392 55.000 5.05 0.00 39.09 4.09
219 220 0.107945 AGAAATCTGTGCCGGAGCTC 60.108 55.000 5.05 4.71 40.80 4.09
220 221 1.078143 AAATCTGTGCCGGAGCTCC 60.078 57.895 23.79 23.79 40.80 4.70
230 231 3.550974 GGAGCTCCGCCTAATCCA 58.449 61.111 19.06 0.00 0.00 3.41
231 232 2.062070 GGAGCTCCGCCTAATCCAT 58.938 57.895 19.06 0.00 0.00 3.41
232 233 0.036858 GGAGCTCCGCCTAATCCATC 60.037 60.000 19.06 0.00 0.00 3.51
233 234 0.036858 GAGCTCCGCCTAATCCATCC 60.037 60.000 0.87 0.00 0.00 3.51
234 235 1.003233 GCTCCGCCTAATCCATCCC 60.003 63.158 0.00 0.00 0.00 3.85
235 236 1.293498 CTCCGCCTAATCCATCCCG 59.707 63.158 0.00 0.00 0.00 5.14
236 237 1.152419 TCCGCCTAATCCATCCCGA 60.152 57.895 0.00 0.00 0.00 5.14
237 238 1.004918 CCGCCTAATCCATCCCGAC 60.005 63.158 0.00 0.00 0.00 4.79
238 239 1.372997 CGCCTAATCCATCCCGACG 60.373 63.158 0.00 0.00 0.00 5.12
239 240 1.802337 CGCCTAATCCATCCCGACGA 61.802 60.000 0.00 0.00 0.00 4.20
240 241 0.391597 GCCTAATCCATCCCGACGAA 59.608 55.000 0.00 0.00 0.00 3.85
241 242 1.872653 GCCTAATCCATCCCGACGAAC 60.873 57.143 0.00 0.00 0.00 3.95
242 243 1.602165 CCTAATCCATCCCGACGAACG 60.602 57.143 0.00 0.00 42.18 3.95
243 244 1.335810 CTAATCCATCCCGACGAACGA 59.664 52.381 0.00 0.00 45.77 3.85
244 245 0.533491 AATCCATCCCGACGAACGAA 59.467 50.000 0.00 0.00 45.77 3.85
245 246 0.179119 ATCCATCCCGACGAACGAAC 60.179 55.000 0.00 0.00 45.77 3.95
246 247 2.156446 CCATCCCGACGAACGAACG 61.156 63.158 0.00 6.43 45.77 3.95
248 249 1.443194 ATCCCGACGAACGAACGTG 60.443 57.895 14.77 8.30 46.52 4.49
249 250 1.855213 ATCCCGACGAACGAACGTGA 61.855 55.000 14.77 7.85 46.52 4.35
250 251 2.078914 CCCGACGAACGAACGTGAG 61.079 63.158 14.77 9.28 46.52 3.51
251 252 1.082561 CCGACGAACGAACGTGAGA 60.083 57.895 14.77 0.00 46.52 3.27
252 253 0.658244 CCGACGAACGAACGTGAGAA 60.658 55.000 14.77 0.00 46.52 2.87
253 254 0.695943 CGACGAACGAACGTGAGAAG 59.304 55.000 14.77 0.00 46.52 2.85
254 255 1.050767 GACGAACGAACGTGAGAAGG 58.949 55.000 14.77 0.00 46.52 3.46
255 256 0.664761 ACGAACGAACGTGAGAAGGA 59.335 50.000 10.19 0.00 44.84 3.36
256 257 1.268899 ACGAACGAACGTGAGAAGGAT 59.731 47.619 10.19 0.00 44.84 3.24
257 258 1.912110 CGAACGAACGTGAGAAGGATC 59.088 52.381 0.00 0.00 0.00 3.36
258 259 1.912110 GAACGAACGTGAGAAGGATCG 59.088 52.381 0.00 0.00 36.45 3.69
259 260 0.170561 ACGAACGTGAGAAGGATCGG 59.829 55.000 6.92 0.00 34.81 4.18
260 261 0.450583 CGAACGTGAGAAGGATCGGA 59.549 55.000 0.00 0.00 0.00 4.55
261 262 1.532090 CGAACGTGAGAAGGATCGGAG 60.532 57.143 0.00 0.00 0.00 4.63
262 263 0.173708 AACGTGAGAAGGATCGGAGC 59.826 55.000 0.00 0.00 0.00 4.70
263 264 1.066587 CGTGAGAAGGATCGGAGCC 59.933 63.158 3.56 3.56 0.00 4.70
264 265 1.388065 CGTGAGAAGGATCGGAGCCT 61.388 60.000 9.45 9.45 37.35 4.58
265 266 0.103937 GTGAGAAGGATCGGAGCCTG 59.896 60.000 16.73 0.00 35.50 4.85
266 267 1.045350 TGAGAAGGATCGGAGCCTGG 61.045 60.000 16.73 0.00 35.50 4.45
267 268 0.757188 GAGAAGGATCGGAGCCTGGA 60.757 60.000 16.73 0.00 35.50 3.86
268 269 0.325671 AGAAGGATCGGAGCCTGGAA 60.326 55.000 16.73 0.00 35.50 3.53
269 270 0.105778 GAAGGATCGGAGCCTGGAAG 59.894 60.000 16.73 0.00 35.50 3.46
270 271 0.325671 AAGGATCGGAGCCTGGAAGA 60.326 55.000 16.73 0.00 35.50 2.87
271 272 1.045911 AGGATCGGAGCCTGGAAGAC 61.046 60.000 15.14 0.00 34.07 3.01
272 273 1.045911 GGATCGGAGCCTGGAAGACT 61.046 60.000 4.74 0.00 34.07 3.24
273 274 0.103937 GATCGGAGCCTGGAAGACTG 59.896 60.000 0.00 0.00 34.07 3.51
274 275 0.324738 ATCGGAGCCTGGAAGACTGA 60.325 55.000 0.00 0.00 34.07 3.41
275 276 0.324738 TCGGAGCCTGGAAGACTGAT 60.325 55.000 0.00 0.00 34.07 2.90
276 277 0.539051 CGGAGCCTGGAAGACTGATT 59.461 55.000 0.00 0.00 34.07 2.57
277 278 1.472376 CGGAGCCTGGAAGACTGATTC 60.472 57.143 0.00 0.00 34.07 2.52
278 279 1.556911 GGAGCCTGGAAGACTGATTCA 59.443 52.381 0.00 0.00 34.07 2.57
279 280 2.026822 GGAGCCTGGAAGACTGATTCAA 60.027 50.000 0.00 0.00 34.07 2.69
280 281 3.560025 GGAGCCTGGAAGACTGATTCAAA 60.560 47.826 0.00 0.00 34.07 2.69
281 282 3.683802 AGCCTGGAAGACTGATTCAAAG 58.316 45.455 0.00 0.00 34.07 2.77
282 283 3.328931 AGCCTGGAAGACTGATTCAAAGA 59.671 43.478 0.00 0.00 34.07 2.52
283 284 3.438434 GCCTGGAAGACTGATTCAAAGAC 59.562 47.826 0.00 0.00 34.07 3.01
284 285 3.681897 CCTGGAAGACTGATTCAAAGACG 59.318 47.826 0.00 0.00 34.07 4.18
285 286 4.560128 CTGGAAGACTGATTCAAAGACGA 58.440 43.478 0.00 0.00 34.07 4.20
286 287 4.956085 TGGAAGACTGATTCAAAGACGAA 58.044 39.130 0.00 0.00 0.00 3.85
287 288 4.991056 TGGAAGACTGATTCAAAGACGAAG 59.009 41.667 0.00 0.00 0.00 3.79
288 289 4.143009 GGAAGACTGATTCAAAGACGAAGC 60.143 45.833 0.00 0.00 0.00 3.86
289 290 2.989840 AGACTGATTCAAAGACGAAGCG 59.010 45.455 0.00 0.00 34.00 4.68
290 291 1.461127 ACTGATTCAAAGACGAAGCGC 59.539 47.619 0.00 0.00 34.00 5.92
291 292 0.796312 TGATTCAAAGACGAAGCGCC 59.204 50.000 2.29 0.00 34.00 6.53
292 293 0.247301 GATTCAAAGACGAAGCGCCG 60.247 55.000 2.29 3.59 0.00 6.46
293 294 2.240612 ATTCAAAGACGAAGCGCCGC 62.241 55.000 2.29 0.00 0.00 6.53
294 295 4.445545 CAAAGACGAAGCGCCGCC 62.446 66.667 4.98 0.00 0.00 6.13
295 296 4.980805 AAAGACGAAGCGCCGCCA 62.981 61.111 4.98 0.00 0.00 5.69
296 297 4.760047 AAGACGAAGCGCCGCCAT 62.760 61.111 4.98 0.00 0.00 4.40
301 302 3.654020 GAAGCGCCGCCATCCATC 61.654 66.667 4.98 0.00 0.00 3.51
302 303 4.181010 AAGCGCCGCCATCCATCT 62.181 61.111 4.98 0.00 0.00 2.90
303 304 4.923942 AGCGCCGCCATCCATCTG 62.924 66.667 4.98 0.00 0.00 2.90
304 305 4.916293 GCGCCGCCATCCATCTGA 62.916 66.667 0.00 0.00 0.00 3.27
305 306 2.664185 CGCCGCCATCCATCTGAG 60.664 66.667 0.00 0.00 0.00 3.35
306 307 2.976903 GCCGCCATCCATCTGAGC 60.977 66.667 0.00 0.00 0.00 4.26
307 308 2.664185 CCGCCATCCATCTGAGCG 60.664 66.667 0.00 0.00 46.04 5.03
308 309 3.344215 CGCCATCCATCTGAGCGC 61.344 66.667 0.00 0.00 40.35 5.92
309 310 2.976903 GCCATCCATCTGAGCGCC 60.977 66.667 2.29 0.00 0.00 6.53
310 311 2.664185 CCATCCATCTGAGCGCCG 60.664 66.667 2.29 0.00 0.00 6.46
311 312 3.344215 CATCCATCTGAGCGCCGC 61.344 66.667 2.29 0.00 0.00 6.53
312 313 4.615815 ATCCATCTGAGCGCCGCC 62.616 66.667 4.98 0.00 0.00 6.13
315 316 4.845580 CATCTGAGCGCCGCCCTT 62.846 66.667 4.98 0.00 0.00 3.95
316 317 4.845580 ATCTGAGCGCCGCCCTTG 62.846 66.667 4.98 0.00 0.00 3.61
327 328 3.758172 GCCCTTGCGAGAACCAAA 58.242 55.556 1.22 0.00 0.00 3.28
328 329 2.037871 GCCCTTGCGAGAACCAAAA 58.962 52.632 1.22 0.00 0.00 2.44
329 330 0.387565 GCCCTTGCGAGAACCAAAAA 59.612 50.000 1.22 0.00 0.00 1.94
330 331 1.868109 GCCCTTGCGAGAACCAAAAAC 60.868 52.381 1.22 0.00 0.00 2.43
331 332 1.269569 CCCTTGCGAGAACCAAAAACC 60.270 52.381 1.22 0.00 0.00 3.27
332 333 1.681264 CCTTGCGAGAACCAAAAACCT 59.319 47.619 1.22 0.00 0.00 3.50
333 334 2.882137 CCTTGCGAGAACCAAAAACCTA 59.118 45.455 1.22 0.00 0.00 3.08
334 335 3.304458 CCTTGCGAGAACCAAAAACCTAC 60.304 47.826 1.22 0.00 0.00 3.18
335 336 2.223745 TGCGAGAACCAAAAACCTACC 58.776 47.619 0.00 0.00 0.00 3.18
336 337 1.538512 GCGAGAACCAAAAACCTACCC 59.461 52.381 0.00 0.00 0.00 3.69
337 338 2.812983 GCGAGAACCAAAAACCTACCCT 60.813 50.000 0.00 0.00 0.00 4.34
338 339 3.557686 GCGAGAACCAAAAACCTACCCTA 60.558 47.826 0.00 0.00 0.00 3.53
339 340 4.840271 CGAGAACCAAAAACCTACCCTAT 58.160 43.478 0.00 0.00 0.00 2.57
340 341 4.874396 CGAGAACCAAAAACCTACCCTATC 59.126 45.833 0.00 0.00 0.00 2.08
341 342 5.338137 CGAGAACCAAAAACCTACCCTATCT 60.338 44.000 0.00 0.00 0.00 1.98
342 343 6.127253 CGAGAACCAAAAACCTACCCTATCTA 60.127 42.308 0.00 0.00 0.00 1.98
343 344 7.578458 AGAACCAAAAACCTACCCTATCTAA 57.422 36.000 0.00 0.00 0.00 2.10
344 345 7.631007 AGAACCAAAAACCTACCCTATCTAAG 58.369 38.462 0.00 0.00 0.00 2.18
345 346 5.752650 ACCAAAAACCTACCCTATCTAAGC 58.247 41.667 0.00 0.00 0.00 3.09
346 347 5.131067 CCAAAAACCTACCCTATCTAAGCC 58.869 45.833 0.00 0.00 0.00 4.35
347 348 4.684484 AAAACCTACCCTATCTAAGCCG 57.316 45.455 0.00 0.00 0.00 5.52
348 349 3.607490 AACCTACCCTATCTAAGCCGA 57.393 47.619 0.00 0.00 0.00 5.54
349 350 3.157750 ACCTACCCTATCTAAGCCGAG 57.842 52.381 0.00 0.00 0.00 4.63
350 351 2.225066 ACCTACCCTATCTAAGCCGAGG 60.225 54.545 0.00 0.00 0.00 4.63
351 352 1.819903 CTACCCTATCTAAGCCGAGGC 59.180 57.143 5.89 5.89 42.33 4.70
352 353 0.105658 ACCCTATCTAAGCCGAGGCA 60.106 55.000 17.18 0.00 44.88 4.75
353 354 0.318762 CCCTATCTAAGCCGAGGCAC 59.681 60.000 17.18 0.00 44.88 5.01
354 355 0.318762 CCTATCTAAGCCGAGGCACC 59.681 60.000 17.18 0.00 44.88 5.01
355 356 1.040646 CTATCTAAGCCGAGGCACCA 58.959 55.000 17.18 0.00 44.88 4.17
356 357 1.412710 CTATCTAAGCCGAGGCACCAA 59.587 52.381 17.18 0.00 44.88 3.67
357 358 0.618458 ATCTAAGCCGAGGCACCAAA 59.382 50.000 17.18 0.00 44.88 3.28
358 359 0.398696 TCTAAGCCGAGGCACCAAAA 59.601 50.000 17.18 0.00 44.88 2.44
359 360 1.202830 TCTAAGCCGAGGCACCAAAAA 60.203 47.619 17.18 0.00 44.88 1.94
360 361 1.818674 CTAAGCCGAGGCACCAAAAAT 59.181 47.619 17.18 0.00 44.88 1.82
361 362 1.917872 AAGCCGAGGCACCAAAAATA 58.082 45.000 17.18 0.00 44.88 1.40
362 363 1.173913 AGCCGAGGCACCAAAAATAC 58.826 50.000 17.18 0.00 44.88 1.89
363 364 0.172578 GCCGAGGCACCAAAAATACC 59.827 55.000 9.58 0.00 41.49 2.73
364 365 0.815095 CCGAGGCACCAAAAATACCC 59.185 55.000 0.00 0.00 0.00 3.69
365 366 0.815095 CGAGGCACCAAAAATACCCC 59.185 55.000 0.00 0.00 0.00 4.95
366 367 0.815095 GAGGCACCAAAAATACCCCG 59.185 55.000 0.00 0.00 0.00 5.73
367 368 1.216977 GGCACCAAAAATACCCCGC 59.783 57.895 0.00 0.00 0.00 6.13
368 369 1.216977 GCACCAAAAATACCCCGCC 59.783 57.895 0.00 0.00 0.00 6.13
369 370 1.536943 GCACCAAAAATACCCCGCCA 61.537 55.000 0.00 0.00 0.00 5.69
370 371 0.245266 CACCAAAAATACCCCGCCAC 59.755 55.000 0.00 0.00 0.00 5.01
371 372 0.178958 ACCAAAAATACCCCGCCACA 60.179 50.000 0.00 0.00 0.00 4.17
372 373 0.530288 CCAAAAATACCCCGCCACAG 59.470 55.000 0.00 0.00 0.00 3.66
373 374 0.530288 CAAAAATACCCCGCCACAGG 59.470 55.000 0.00 0.00 0.00 4.00
374 375 1.254975 AAAAATACCCCGCCACAGGC 61.255 55.000 0.00 0.00 46.75 4.85
396 397 4.410400 GGAACGGCAGGTGGAGGG 62.410 72.222 0.00 0.00 0.00 4.30
397 398 4.410400 GAACGGCAGGTGGAGGGG 62.410 72.222 0.00 0.00 0.00 4.79
398 399 4.974438 AACGGCAGGTGGAGGGGA 62.974 66.667 0.00 0.00 0.00 4.81
404 405 4.332543 AGGTGGAGGGGAGGCGAA 62.333 66.667 0.00 0.00 0.00 4.70
405 406 3.090532 GGTGGAGGGGAGGCGAAT 61.091 66.667 0.00 0.00 0.00 3.34
406 407 2.680370 GGTGGAGGGGAGGCGAATT 61.680 63.158 0.00 0.00 0.00 2.17
407 408 1.153147 GTGGAGGGGAGGCGAATTC 60.153 63.158 0.00 0.00 0.00 2.17
408 409 1.615124 TGGAGGGGAGGCGAATTCA 60.615 57.895 6.22 0.00 0.00 2.57
409 410 1.153147 GGAGGGGAGGCGAATTCAC 60.153 63.158 6.22 0.00 0.00 3.18
410 411 1.521681 GAGGGGAGGCGAATTCACG 60.522 63.158 6.22 0.00 0.00 4.35
411 412 2.513897 GGGGAGGCGAATTCACGG 60.514 66.667 6.22 0.00 0.00 4.94
412 413 2.513897 GGGAGGCGAATTCACGGG 60.514 66.667 6.22 0.00 0.00 5.28
413 414 3.202706 GGAGGCGAATTCACGGGC 61.203 66.667 6.22 1.76 0.00 6.13
414 415 2.125106 GAGGCGAATTCACGGGCT 60.125 61.111 6.22 6.93 39.50 5.19
415 416 2.125106 AGGCGAATTCACGGGCTC 60.125 61.111 6.22 0.00 29.71 4.70
416 417 3.564027 GGCGAATTCACGGGCTCG 61.564 66.667 3.27 3.27 43.02 5.03
418 419 3.564027 CGAATTCACGGGCTCGCC 61.564 66.667 5.51 0.00 40.63 5.54
419 420 3.564027 GAATTCACGGGCTCGCCG 61.564 66.667 5.51 0.92 40.63 6.46
427 428 4.162690 GGGCTCGCCGGTGAAGAT 62.163 66.667 20.06 0.00 36.85 2.40
428 429 2.586357 GGCTCGCCGGTGAAGATC 60.586 66.667 20.06 8.27 0.00 2.75
429 430 2.956964 GCTCGCCGGTGAAGATCG 60.957 66.667 20.06 8.03 0.00 3.69
430 431 2.798689 CTCGCCGGTGAAGATCGA 59.201 61.111 20.06 8.54 0.00 3.59
431 432 1.138883 CTCGCCGGTGAAGATCGAA 59.861 57.895 20.06 0.00 0.00 3.71
432 433 0.867753 CTCGCCGGTGAAGATCGAAG 60.868 60.000 20.06 0.25 0.00 3.79
433 434 1.878522 CGCCGGTGAAGATCGAAGG 60.879 63.158 10.20 0.00 0.00 3.46
434 435 1.515954 GCCGGTGAAGATCGAAGGA 59.484 57.895 1.90 0.00 0.00 3.36
435 436 0.108329 GCCGGTGAAGATCGAAGGAA 60.108 55.000 1.90 0.00 0.00 3.36
436 437 1.674817 GCCGGTGAAGATCGAAGGAAA 60.675 52.381 1.90 0.00 0.00 3.13
437 438 2.695359 CCGGTGAAGATCGAAGGAAAA 58.305 47.619 0.00 0.00 0.00 2.29
438 439 3.071479 CCGGTGAAGATCGAAGGAAAAA 58.929 45.455 0.00 0.00 0.00 1.94
458 459 1.822506 AAAAGGCTTTCCCTAGTCGC 58.177 50.000 13.76 0.00 45.62 5.19
459 460 0.035343 AAAGGCTTTCCCTAGTCGCC 60.035 55.000 6.68 0.00 45.62 5.54
460 461 1.306226 AGGCTTTCCCTAGTCGCCT 60.306 57.895 0.00 0.00 44.08 5.52
461 462 1.153349 GGCTTTCCCTAGTCGCCTG 60.153 63.158 0.00 0.00 37.76 4.85
462 463 1.153349 GCTTTCCCTAGTCGCCTGG 60.153 63.158 0.00 0.00 0.00 4.45
463 464 1.153349 CTTTCCCTAGTCGCCTGGC 60.153 63.158 9.11 9.11 0.00 4.85
464 465 1.899437 CTTTCCCTAGTCGCCTGGCA 61.899 60.000 20.29 2.90 0.00 4.92
465 466 1.485294 TTTCCCTAGTCGCCTGGCAA 61.485 55.000 20.29 0.00 0.00 4.52
466 467 1.899437 TTCCCTAGTCGCCTGGCAAG 61.899 60.000 20.29 9.66 0.00 4.01
467 468 2.359169 CCCTAGTCGCCTGGCAAGA 61.359 63.158 20.29 5.78 0.00 3.02
468 469 1.596934 CCTAGTCGCCTGGCAAGAA 59.403 57.895 20.29 0.00 0.00 2.52
469 470 0.460987 CCTAGTCGCCTGGCAAGAAG 60.461 60.000 20.29 10.01 0.00 2.85
470 471 0.247736 CTAGTCGCCTGGCAAGAAGT 59.752 55.000 20.29 6.24 0.00 3.01
471 472 0.037326 TAGTCGCCTGGCAAGAAGTG 60.037 55.000 20.29 0.00 0.00 3.16
528 529 6.575244 TGTGGGAATGATGGAGTAATTAGT 57.425 37.500 0.00 0.00 0.00 2.24
626 628 8.857694 AAGAAAATATTACTTCCTCCGTTTCA 57.142 30.769 0.00 0.00 0.00 2.69
703 1049 5.906113 TGAGATACTCCTCAGTCAAACTC 57.094 43.478 0.00 0.00 38.18 3.01
705 1051 4.337145 AGATACTCCTCAGTCAAACTCGT 58.663 43.478 0.00 0.00 33.62 4.18
706 1052 2.802787 ACTCCTCAGTCAAACTCGTG 57.197 50.000 0.00 0.00 0.00 4.35
707 1053 1.269831 ACTCCTCAGTCAAACTCGTGC 60.270 52.381 0.00 0.00 0.00 5.34
708 1054 0.750249 TCCTCAGTCAAACTCGTGCA 59.250 50.000 0.00 0.00 0.00 4.57
709 1055 1.138069 TCCTCAGTCAAACTCGTGCAA 59.862 47.619 0.00 0.00 0.00 4.08
711 1057 2.286418 CCTCAGTCAAACTCGTGCAAAC 60.286 50.000 0.00 0.00 0.00 2.93
712 1058 2.609459 CTCAGTCAAACTCGTGCAAACT 59.391 45.455 0.00 0.00 0.00 2.66
713 1059 2.607635 TCAGTCAAACTCGTGCAAACTC 59.392 45.455 0.00 0.00 0.00 3.01
715 1061 2.866762 AGTCAAACTCGTGCAAACTCTC 59.133 45.455 0.00 0.00 0.00 3.20
716 1062 1.858458 TCAAACTCGTGCAAACTCTCG 59.142 47.619 0.00 0.00 0.00 4.04
717 1063 1.593006 CAAACTCGTGCAAACTCTCGT 59.407 47.619 0.00 0.00 0.00 4.18
718 1064 1.935933 AACTCGTGCAAACTCTCGTT 58.064 45.000 0.00 0.00 34.03 3.85
719 1065 1.488527 ACTCGTGCAAACTCTCGTTC 58.511 50.000 0.00 0.00 31.66 3.95
720 1066 0.784778 CTCGTGCAAACTCTCGTTCC 59.215 55.000 0.00 0.00 31.66 3.62
721 1067 0.599204 TCGTGCAAACTCTCGTTCCC 60.599 55.000 0.00 0.00 31.66 3.97
722 1068 1.566018 CGTGCAAACTCTCGTTCCCC 61.566 60.000 0.00 0.00 31.66 4.81
723 1069 0.250338 GTGCAAACTCTCGTTCCCCT 60.250 55.000 0.00 0.00 31.66 4.79
724 1070 0.250295 TGCAAACTCTCGTTCCCCTG 60.250 55.000 0.00 0.00 31.66 4.45
725 1071 1.578206 GCAAACTCTCGTTCCCCTGC 61.578 60.000 0.00 0.00 31.66 4.85
726 1072 0.955919 CAAACTCTCGTTCCCCTGCC 60.956 60.000 0.00 0.00 31.66 4.85
727 1073 2.125766 AAACTCTCGTTCCCCTGCCC 62.126 60.000 0.00 0.00 31.66 5.36
728 1074 3.003173 CTCTCGTTCCCCTGCCCA 61.003 66.667 0.00 0.00 0.00 5.36
729 1075 2.528127 TCTCGTTCCCCTGCCCAA 60.528 61.111 0.00 0.00 0.00 4.12
730 1076 2.359975 CTCGTTCCCCTGCCCAAC 60.360 66.667 0.00 0.00 0.00 3.77
732 1078 2.672996 CGTTCCCCTGCCCAACTG 60.673 66.667 0.00 0.00 0.00 3.16
737 1083 1.080638 TCCCCTGCCCAACTGTTTAT 58.919 50.000 0.00 0.00 0.00 1.40
738 1084 1.005450 TCCCCTGCCCAACTGTTTATC 59.995 52.381 0.00 0.00 0.00 1.75
739 1085 1.272425 CCCCTGCCCAACTGTTTATCA 60.272 52.381 0.00 0.00 0.00 2.15
740 1086 2.524306 CCCTGCCCAACTGTTTATCAA 58.476 47.619 0.00 0.00 0.00 2.57
741 1087 2.896685 CCCTGCCCAACTGTTTATCAAA 59.103 45.455 0.00 0.00 0.00 2.69
760 1200 9.787435 TTATCAAACAGGTTGTTGTAGTAATCT 57.213 29.630 0.00 0.00 40.14 2.40
763 1203 9.616156 TCAAACAGGTTGTTGTAGTAATCTAAA 57.384 29.630 0.00 0.00 40.14 1.85
764 1204 9.659830 CAAACAGGTTGTTGTAGTAATCTAAAC 57.340 33.333 0.00 0.00 40.14 2.01
767 1207 6.647895 CAGGTTGTTGTAGTAATCTAAACGGT 59.352 38.462 0.00 0.00 0.00 4.83
821 1267 4.555348 AAACGCGTCCTAATTTGTTCAA 57.445 36.364 14.44 0.00 0.00 2.69
866 1312 3.893753 TCCAAAGGAAAATCACCCTGA 57.106 42.857 0.00 0.00 32.12 3.86
960 1406 2.579738 GTCTCCTTCTCCACGCCC 59.420 66.667 0.00 0.00 0.00 6.13
966 1415 1.369091 CCTTCTCCACGCCCAATTCG 61.369 60.000 0.00 0.00 0.00 3.34
979 1428 4.095185 CGCCCAATTCGTCACCTATAAAAA 59.905 41.667 0.00 0.00 0.00 1.94
982 1431 5.067283 CCCAATTCGTCACCTATAAAAAGGG 59.933 44.000 0.00 0.00 41.32 3.95
1048 1497 2.023223 GCGTGCGGGACTTCGTTTA 61.023 57.895 0.00 0.00 0.00 2.01
1139 1591 2.366167 AGCCTCCGGAGCAGGAAT 60.366 61.111 26.87 3.27 40.25 3.01
1292 1753 4.699522 GAAGGAACCGCGTGGCCT 62.700 66.667 16.69 11.94 39.70 5.19
1537 2013 2.103934 CCTGAGCGAGAAGGCGAG 59.896 66.667 0.00 0.00 38.18 5.03
1781 2257 2.158740 GGAGGTGAGCTTTCTTATCCCC 60.159 54.545 0.00 0.00 0.00 4.81
1796 2272 0.034337 TCCCCGTTCTCGTTTTCCAG 59.966 55.000 0.00 0.00 35.01 3.86
1907 2393 0.459899 TTATCCATCTCGCGTGTGCT 59.540 50.000 5.77 0.00 39.65 4.40
1931 2418 3.280295 TCACTTTTGCCCACGAAACTAA 58.720 40.909 0.00 0.00 0.00 2.24
1933 2420 3.066203 CACTTTTGCCCACGAAACTAACT 59.934 43.478 0.00 0.00 0.00 2.24
1946 2434 9.030301 CCACGAAACTAACTGAAAAATGATTTT 57.970 29.630 0.00 0.00 41.37 1.82
2060 2558 4.912173 GCACGTCGACATGCAAAA 57.088 50.000 29.76 0.00 41.65 2.44
2061 2559 3.156401 GCACGTCGACATGCAAAAA 57.844 47.368 29.76 0.00 41.65 1.94
2084 2587 2.825086 ACAAATTAATCTCCACGCGC 57.175 45.000 5.73 0.00 0.00 6.86
2088 2591 2.989055 ATTAATCTCCACGCGCCCGG 62.989 60.000 5.73 4.40 39.22 5.73
2161 2676 7.220741 TCGTACGAGTACTAGTGGTAGATAT 57.779 40.000 15.28 0.00 34.04 1.63
2206 2722 4.202010 TGCTTTGCAAGACAAGTACCTTTC 60.202 41.667 0.00 0.00 40.06 2.62
2222 2738 2.072874 TTTCCCTGGCTCTGCTTGCT 62.073 55.000 0.00 0.00 0.00 3.91
2228 2744 2.111582 GGCTCTGCTTGCTGTAGGC 61.112 63.158 0.00 0.00 42.22 3.93
2236 2752 0.385974 CTTGCTGTAGGCGTTGTTGC 60.386 55.000 0.00 0.00 45.43 4.17
2334 2850 1.813513 CTGCCAGTCCTTTCGTTCAT 58.186 50.000 0.00 0.00 0.00 2.57
2370 2887 8.006298 ACTCCAATCAAGATCAACTCTACTAG 57.994 38.462 0.00 0.00 32.41 2.57
2420 3098 7.876582 ACAAATCCACTAGTAGTAACTGTTTCC 59.123 37.037 1.57 0.00 36.36 3.13
2422 3100 6.585695 TCCACTAGTAGTAACTGTTTCCTG 57.414 41.667 1.57 0.00 36.36 3.86
2423 3101 6.073314 TCCACTAGTAGTAACTGTTTCCTGT 58.927 40.000 1.57 0.00 36.36 4.00
2424 3102 6.208204 TCCACTAGTAGTAACTGTTTCCTGTC 59.792 42.308 1.57 0.00 36.36 3.51
2425 3103 6.015688 CCACTAGTAGTAACTGTTTCCTGTCA 60.016 42.308 1.57 0.00 36.36 3.58
2573 3259 2.176546 CGTTGCGTGCATCTTGGG 59.823 61.111 0.00 0.00 0.00 4.12
2624 3313 3.719173 TGGAGCTAAAAACCGTTTTGG 57.281 42.857 9.98 7.59 46.41 3.28
2713 3402 2.597510 AACGAAGCTTGGGGTGGC 60.598 61.111 13.38 0.00 0.00 5.01
2720 3409 0.187361 AGCTTGGGGTGGCAACTAAA 59.813 50.000 0.97 0.00 37.61 1.85
2800 3531 8.706936 GTCTGCTCTCATGTGTACATATAATTG 58.293 37.037 4.64 0.00 34.26 2.32
2940 3671 7.970614 GGATATTGTTTGTCATTCAGAAAGTCC 59.029 37.037 0.00 0.00 0.00 3.85
2997 3728 1.320259 GCACAACAAAACACAACGCTC 59.680 47.619 0.00 0.00 0.00 5.03
3003 3734 4.829064 ACAAAACACAACGCTCATGTAT 57.171 36.364 0.00 0.00 0.00 2.29
3043 3774 1.067060 TGCGAGTTGGATATGTCTCCG 59.933 52.381 0.00 0.00 38.21 4.63
3044 3775 1.337071 GCGAGTTGGATATGTCTCCGA 59.663 52.381 0.00 0.00 38.21 4.55
3144 3888 5.953183 TGAACAATCACTGCCATTTATCAC 58.047 37.500 0.00 0.00 0.00 3.06
3282 4041 5.764686 ACAATGTCACTTCTGAAATGCAGTA 59.235 36.000 0.00 0.00 45.14 2.74
3287 4046 8.389779 TGTCACTTCTGAAATGCAGTAAATTA 57.610 30.769 0.00 0.00 45.14 1.40
3344 4104 1.659233 CCACCACATTTCTTGCGCA 59.341 52.632 5.66 5.66 0.00 6.09
3352 4112 0.318120 ATTTCTTGCGCACCCCAAAG 59.682 50.000 11.12 3.27 0.00 2.77
3353 4113 1.040339 TTTCTTGCGCACCCCAAAGT 61.040 50.000 11.12 0.00 0.00 2.66
3354 4114 1.452145 TTCTTGCGCACCCCAAAGTC 61.452 55.000 11.12 0.00 0.00 3.01
3355 4115 1.898574 CTTGCGCACCCCAAAGTCT 60.899 57.895 11.12 0.00 0.00 3.24
3356 4116 0.605319 CTTGCGCACCCCAAAGTCTA 60.605 55.000 11.12 0.00 0.00 2.59
3357 4117 0.037590 TTGCGCACCCCAAAGTCTAT 59.962 50.000 11.12 0.00 0.00 1.98
3361 4122 0.463833 GCACCCCAAAGTCTATCGGG 60.464 60.000 0.00 0.00 39.85 5.14
3398 4159 5.400066 TCTCAATAAACACTGATGACCGA 57.600 39.130 0.00 0.00 0.00 4.69
3405 4166 4.749245 AACACTGATGACCGATTTGAAC 57.251 40.909 0.00 0.00 0.00 3.18
3411 4173 5.299279 ACTGATGACCGATTTGAACTGTTTT 59.701 36.000 0.00 0.00 0.00 2.43
3445 4207 0.611200 CATGTCGGGTCCACCTGTAA 59.389 55.000 4.43 0.00 43.01 2.41
3446 4208 0.902531 ATGTCGGGTCCACCTGTAAG 59.097 55.000 4.43 0.00 43.01 2.34
3448 4210 2.125673 CGGGTCCACCTGTAAGCG 60.126 66.667 0.00 0.00 37.62 4.68
3467 4229 2.010670 CTGACGTGGCACAAAACGA 58.989 52.632 19.09 0.00 44.16 3.85
3471 4233 1.010125 CGTGGCACAAAACGACCAG 60.010 57.895 19.09 0.00 44.16 4.00
3479 4241 2.094575 CACAAAACGACCAGACAAACGA 59.905 45.455 0.00 0.00 0.00 3.85
3519 4429 2.753043 GTGGGGTCGGAGTCGCTA 60.753 66.667 0.00 0.00 36.13 4.26
3523 4433 3.217743 GGTCGGAGTCGCTAGGGG 61.218 72.222 6.99 0.00 36.13 4.79
3525 4435 2.050934 GTCGGAGTCGCTAGGGGTT 61.051 63.158 6.99 0.00 36.13 4.11
3526 4436 2.050350 TCGGAGTCGCTAGGGGTTG 61.050 63.158 6.99 0.00 36.13 3.77
3528 4438 1.601419 CGGAGTCGCTAGGGGTTGAA 61.601 60.000 6.99 0.00 0.00 2.69
3529 4439 0.108281 GGAGTCGCTAGGGGTTGAAC 60.108 60.000 6.99 0.00 0.00 3.18
3532 4442 1.607178 TCGCTAGGGGTTGAACGGA 60.607 57.895 6.99 0.00 0.00 4.69
3533 4443 1.153628 CGCTAGGGGTTGAACGGAG 60.154 63.158 0.00 0.00 0.00 4.63
3534 4444 1.449778 GCTAGGGGTTGAACGGAGC 60.450 63.158 0.00 0.00 0.00 4.70
3579 4489 3.414193 CTCCTGCCATGGCCTCCA 61.414 66.667 33.44 14.41 41.09 3.86
3608 4518 3.329889 ATGCCTCCACCGCCTCAA 61.330 61.111 0.00 0.00 0.00 3.02
3615 4525 3.414700 CACCGCCTCAACGTGAGC 61.415 66.667 8.85 0.41 42.98 4.26
3713 4623 2.033757 AGGCTTGTCCTGCTGCTG 59.966 61.111 0.00 0.00 45.54 4.41
3714 4624 3.745803 GGCTTGTCCTGCTGCTGC 61.746 66.667 8.89 8.89 40.20 5.25
3715 4625 2.672307 GCTTGTCCTGCTGCTGCT 60.672 61.111 17.00 0.00 40.48 4.24
3716 4626 1.376424 GCTTGTCCTGCTGCTGCTA 60.376 57.895 17.00 2.62 40.48 3.49
3717 4627 1.642952 GCTTGTCCTGCTGCTGCTAC 61.643 60.000 17.00 12.11 40.48 3.58
3718 4628 1.003355 TTGTCCTGCTGCTGCTACC 60.003 57.895 17.00 3.09 40.48 3.18
3719 4629 2.510238 GTCCTGCTGCTGCTACCG 60.510 66.667 17.00 2.93 40.48 4.02
3720 4630 4.457496 TCCTGCTGCTGCTACCGC 62.457 66.667 17.00 0.00 40.48 5.68
3721 4631 4.463879 CCTGCTGCTGCTACCGCT 62.464 66.667 17.00 0.00 40.48 5.52
3722 4632 3.193614 CTGCTGCTGCTACCGCTG 61.194 66.667 17.00 0.00 40.48 5.18
3762 4672 1.069090 TGGCTCCACACGACACTTC 59.931 57.895 0.00 0.00 0.00 3.01
3766 4676 0.600255 CTCCACACGACACTTCCCAC 60.600 60.000 0.00 0.00 0.00 4.61
3768 4678 2.279918 ACACGACACTTCCCACGC 60.280 61.111 0.00 0.00 0.00 5.34
3769 4679 2.279851 CACGACACTTCCCACGCA 60.280 61.111 0.00 0.00 0.00 5.24
3776 4686 2.361610 CTTCCCACGCATGGCCTT 60.362 61.111 3.32 0.00 45.76 4.35
3779 4689 2.361610 CCCACGCATGGCCTTCTT 60.362 61.111 3.32 0.00 45.76 2.52
3782 4692 1.372087 CCACGCATGGCCTTCTTCTC 61.372 60.000 3.32 0.00 39.82 2.87
3787 4697 1.211456 CATGGCCTTCTTCTCCTCCT 58.789 55.000 3.32 0.00 0.00 3.69
3795 4707 0.251386 TCTTCTCCTCCTGACGTGCT 60.251 55.000 0.00 0.00 0.00 4.40
3799 4711 1.533033 TCCTCCTGACGTGCTGGAA 60.533 57.895 0.00 0.00 43.13 3.53
3812 4724 3.626996 CTGGAAGCCATGGCCGACA 62.627 63.158 33.14 25.39 43.17 4.35
3813 4725 2.124151 GGAAGCCATGGCCGACAT 60.124 61.111 33.14 11.80 43.17 3.06
3821 4733 2.811514 ATGGCCGACATCTCCGCAT 61.812 57.895 0.00 0.00 33.53 4.73
3831 4743 1.118356 ATCTCCGCATGACTCCTCCC 61.118 60.000 0.00 0.00 0.00 4.30
3832 4744 2.038813 TCCGCATGACTCCTCCCA 59.961 61.111 0.00 0.00 0.00 4.37
3836 4748 2.503061 CATGACTCCTCCCAGGCG 59.497 66.667 0.00 0.00 34.61 5.52
3837 4749 3.474570 ATGACTCCTCCCAGGCGC 61.475 66.667 0.00 0.00 34.61 6.53
3856 4768 2.185867 GCCTCGCCCGACAATACA 59.814 61.111 0.00 0.00 0.00 2.29
3857 4769 1.448893 GCCTCGCCCGACAATACAA 60.449 57.895 0.00 0.00 0.00 2.41
3861 4773 1.376166 CGCCCGACAATACAACCCA 60.376 57.895 0.00 0.00 0.00 4.51
3876 4789 0.035056 ACCCATGCCTTTCTCTTCCG 60.035 55.000 0.00 0.00 0.00 4.30
3886 4799 2.217510 TTCTCTTCCGCTAGTGAGGT 57.782 50.000 4.44 0.00 34.59 3.85
3923 4845 3.441290 ACCCTCCGACGAGCTTCG 61.441 66.667 0.00 0.66 46.93 3.79
3927 4849 3.417275 CTCCGACGAGCTTCGCCAT 62.417 63.158 2.17 0.00 45.12 4.40
3930 4852 1.805539 CGACGAGCTTCGCCATGAA 60.806 57.895 0.00 0.00 45.12 2.57
3933 4855 2.464459 CGAGCTTCGCCATGAACCC 61.464 63.158 0.00 0.00 31.14 4.11
3934 4856 1.377202 GAGCTTCGCCATGAACCCA 60.377 57.895 0.00 0.00 31.87 4.51
3937 4859 1.675310 CTTCGCCATGAACCCAGCA 60.675 57.895 0.00 0.00 31.87 4.41
3939 4861 3.818787 CGCCATGAACCCAGCAGC 61.819 66.667 0.00 0.00 0.00 5.25
3973 4895 2.434185 GCTCGCCAATGACCACGA 60.434 61.111 0.00 0.00 0.00 4.35
4080 5017 1.395608 ACAAACGGTGTTGACGTCTTG 59.604 47.619 17.92 12.17 44.83 3.02
4081 5018 1.395608 CAAACGGTGTTGACGTCTTGT 59.604 47.619 17.92 3.33 44.83 3.16
4082 5019 1.283736 AACGGTGTTGACGTCTTGTC 58.716 50.000 17.92 5.10 44.83 3.18
4089 5026 2.260743 GACGTCTTGTCCCCCGTC 59.739 66.667 8.70 0.00 42.04 4.79
4090 5027 2.522436 ACGTCTTGTCCCCCGTCA 60.522 61.111 0.00 0.00 0.00 4.35
4091 5028 2.261671 CGTCTTGTCCCCCGTCAG 59.738 66.667 0.00 0.00 0.00 3.51
4092 5029 2.047179 GTCTTGTCCCCCGTCAGC 60.047 66.667 0.00 0.00 0.00 4.26
4154 5092 5.479716 ACGGTTCAAATCGGTCATTAATC 57.520 39.130 0.00 0.00 36.70 1.75
4198 5136 3.825908 AAAGGGTAGATTTTGGAGGCA 57.174 42.857 0.00 0.00 0.00 4.75
4200 5138 1.992557 AGGGTAGATTTTGGAGGCACA 59.007 47.619 0.00 0.00 0.00 4.57
4233 5171 1.004161 TGGCAATTCCGGATGAGAACA 59.996 47.619 4.15 0.00 37.80 3.18
4321 5267 9.849166 CCTCTCTACAAAAACTTGTAAAACAAA 57.151 29.630 0.00 0.00 37.69 2.83
4343 5289 6.407475 AAAATATGCAAGAAAAATGCGACC 57.593 33.333 0.00 0.00 46.76 4.79
4345 5291 0.947960 TGCAAGAAAAATGCGACCGA 59.052 45.000 0.00 0.00 46.76 4.69
4350 5296 4.671766 GCAAGAAAAATGCGACCGATTAGT 60.672 41.667 0.00 0.00 33.57 2.24
4367 5313 9.530633 ACCGATTAGTTCTAGTTTTAGCATTAG 57.469 33.333 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.437281 AGATCAGGCCAACTCCAGTATG 59.563 50.000 5.01 0.00 0.00 2.39
8 9 2.237143 CAAGATCAGGCCAACTCCAGTA 59.763 50.000 5.01 0.00 0.00 2.74
9 10 1.004044 CAAGATCAGGCCAACTCCAGT 59.996 52.381 5.01 0.00 0.00 4.00
10 11 1.004044 ACAAGATCAGGCCAACTCCAG 59.996 52.381 5.01 0.00 0.00 3.86
11 12 1.003580 GACAAGATCAGGCCAACTCCA 59.996 52.381 5.01 0.00 0.00 3.86
12 13 1.743996 GACAAGATCAGGCCAACTCC 58.256 55.000 5.01 0.00 0.00 3.85
13 14 1.066858 TCGACAAGATCAGGCCAACTC 60.067 52.381 5.01 0.00 0.00 3.01
14 15 0.976641 TCGACAAGATCAGGCCAACT 59.023 50.000 5.01 0.00 0.00 3.16
15 16 2.029838 ATCGACAAGATCAGGCCAAC 57.970 50.000 5.01 0.00 33.45 3.77
16 17 2.787473 AATCGACAAGATCAGGCCAA 57.213 45.000 5.01 0.00 38.98 4.52
17 18 2.499693 TGTAATCGACAAGATCAGGCCA 59.500 45.455 5.01 0.00 38.98 5.36
18 19 3.126831 CTGTAATCGACAAGATCAGGCC 58.873 50.000 0.00 0.00 38.98 5.19
19 20 2.541762 GCTGTAATCGACAAGATCAGGC 59.458 50.000 0.00 0.00 38.98 4.85
20 21 3.126831 GGCTGTAATCGACAAGATCAGG 58.873 50.000 0.00 0.00 38.98 3.86
21 22 3.801050 CAGGCTGTAATCGACAAGATCAG 59.199 47.826 6.28 0.00 38.98 2.90
22 23 3.447229 TCAGGCTGTAATCGACAAGATCA 59.553 43.478 15.27 0.00 38.98 2.92
23 24 4.046938 TCAGGCTGTAATCGACAAGATC 57.953 45.455 15.27 0.00 38.98 2.75
24 25 4.471904 TTCAGGCTGTAATCGACAAGAT 57.528 40.909 15.27 0.00 42.43 2.40
25 26 3.953712 TTCAGGCTGTAATCGACAAGA 57.046 42.857 15.27 0.00 37.70 3.02
26 27 3.997021 ACTTTCAGGCTGTAATCGACAAG 59.003 43.478 15.27 7.44 37.70 3.16
27 28 3.994392 GACTTTCAGGCTGTAATCGACAA 59.006 43.478 15.27 0.00 37.70 3.18
28 29 3.258372 AGACTTTCAGGCTGTAATCGACA 59.742 43.478 15.27 0.00 27.71 4.35
29 30 3.851098 AGACTTTCAGGCTGTAATCGAC 58.149 45.455 15.27 1.36 27.71 4.20
30 31 4.537135 AAGACTTTCAGGCTGTAATCGA 57.463 40.909 15.27 0.00 30.77 3.59
31 32 4.452455 ACAAAGACTTTCAGGCTGTAATCG 59.548 41.667 15.27 3.07 30.77 3.34
32 33 5.693814 CACAAAGACTTTCAGGCTGTAATC 58.306 41.667 15.27 10.44 30.77 1.75
33 34 4.022849 GCACAAAGACTTTCAGGCTGTAAT 60.023 41.667 15.27 1.74 30.77 1.89
34 35 3.315191 GCACAAAGACTTTCAGGCTGTAA 59.685 43.478 15.27 10.53 30.77 2.41
35 36 2.878406 GCACAAAGACTTTCAGGCTGTA 59.122 45.455 15.27 1.01 30.77 2.74
36 37 1.678101 GCACAAAGACTTTCAGGCTGT 59.322 47.619 15.27 0.00 30.77 4.40
37 38 1.677576 TGCACAAAGACTTTCAGGCTG 59.322 47.619 8.58 8.58 30.77 4.85
38 39 1.678101 GTGCACAAAGACTTTCAGGCT 59.322 47.619 13.17 0.00 32.54 4.58
39 40 1.405105 TGTGCACAAAGACTTTCAGGC 59.595 47.619 19.28 3.05 0.00 4.85
40 41 3.996150 ATGTGCACAAAGACTTTCAGG 57.004 42.857 25.72 0.00 0.00 3.86
41 42 4.320494 GGGTATGTGCACAAAGACTTTCAG 60.320 45.833 25.72 0.00 0.00 3.02
42 43 3.568007 GGGTATGTGCACAAAGACTTTCA 59.432 43.478 25.72 0.00 0.00 2.69
43 44 3.057526 GGGGTATGTGCACAAAGACTTTC 60.058 47.826 25.72 14.15 0.00 2.62
44 45 2.890945 GGGGTATGTGCACAAAGACTTT 59.109 45.455 25.72 7.95 0.00 2.66
45 46 2.108250 AGGGGTATGTGCACAAAGACTT 59.892 45.455 25.72 8.77 0.00 3.01
46 47 1.705186 AGGGGTATGTGCACAAAGACT 59.295 47.619 25.72 15.25 0.00 3.24
47 48 2.200373 AGGGGTATGTGCACAAAGAC 57.800 50.000 25.72 20.54 0.00 3.01
48 49 3.308117 CCTTAGGGGTATGTGCACAAAGA 60.308 47.826 25.72 9.59 0.00 2.52
49 50 3.016736 CCTTAGGGGTATGTGCACAAAG 58.983 50.000 25.72 19.39 0.00 2.77
50 51 2.645297 TCCTTAGGGGTATGTGCACAAA 59.355 45.455 25.72 10.66 36.25 2.83
51 52 2.026636 GTCCTTAGGGGTATGTGCACAA 60.027 50.000 25.72 10.60 36.25 3.33
52 53 1.557832 GTCCTTAGGGGTATGTGCACA 59.442 52.381 24.08 24.08 36.25 4.57
53 54 1.134189 GGTCCTTAGGGGTATGTGCAC 60.134 57.143 10.75 10.75 36.25 4.57
54 55 1.209621 GGTCCTTAGGGGTATGTGCA 58.790 55.000 0.00 0.00 36.25 4.57
55 56 1.141053 CTGGTCCTTAGGGGTATGTGC 59.859 57.143 0.00 0.00 36.25 4.57
56 57 1.141053 GCTGGTCCTTAGGGGTATGTG 59.859 57.143 0.00 0.00 36.25 3.21
57 58 1.508256 GCTGGTCCTTAGGGGTATGT 58.492 55.000 0.00 0.00 36.25 2.29
58 59 0.393077 CGCTGGTCCTTAGGGGTATG 59.607 60.000 0.00 0.00 36.25 2.39
59 60 0.031414 ACGCTGGTCCTTAGGGGTAT 60.031 55.000 0.00 0.00 36.25 2.73
60 61 0.252375 AACGCTGGTCCTTAGGGGTA 60.252 55.000 0.00 0.00 36.25 3.69
61 62 1.538135 AACGCTGGTCCTTAGGGGT 60.538 57.895 0.00 0.00 36.25 4.95
62 63 1.221021 GAACGCTGGTCCTTAGGGG 59.779 63.158 0.00 0.00 32.91 4.79
63 64 1.153628 CGAACGCTGGTCCTTAGGG 60.154 63.158 0.00 0.00 0.00 3.53
64 65 0.179134 CTCGAACGCTGGTCCTTAGG 60.179 60.000 0.00 0.00 0.00 2.69
65 66 0.802607 GCTCGAACGCTGGTCCTTAG 60.803 60.000 0.00 0.00 0.00 2.18
66 67 1.214589 GCTCGAACGCTGGTCCTTA 59.785 57.895 0.00 0.00 0.00 2.69
67 68 2.048127 GCTCGAACGCTGGTCCTT 60.048 61.111 0.00 0.00 0.00 3.36
68 69 4.421479 CGCTCGAACGCTGGTCCT 62.421 66.667 0.00 0.00 0.00 3.85
95 96 2.483876 GATTCAAGGATTCGATGGCGA 58.516 47.619 0.00 0.00 46.33 5.54
96 97 1.193203 CGATTCAAGGATTCGATGGCG 59.807 52.381 4.96 0.00 37.54 5.69
97 98 2.483876 TCGATTCAAGGATTCGATGGC 58.516 47.619 8.59 0.00 38.77 4.40
101 102 4.918810 TCAGATCGATTCAAGGATTCGA 57.081 40.909 13.41 13.41 44.44 3.71
102 103 5.284864 TCTTCAGATCGATTCAAGGATTCG 58.715 41.667 0.00 4.63 36.96 3.34
103 104 6.018343 GGTTCTTCAGATCGATTCAAGGATTC 60.018 42.308 0.00 0.00 0.00 2.52
104 105 5.819901 GGTTCTTCAGATCGATTCAAGGATT 59.180 40.000 0.00 0.00 0.00 3.01
105 106 5.130145 AGGTTCTTCAGATCGATTCAAGGAT 59.870 40.000 0.00 0.00 0.00 3.24
106 107 4.467795 AGGTTCTTCAGATCGATTCAAGGA 59.532 41.667 0.00 0.00 0.00 3.36
107 108 4.569966 CAGGTTCTTCAGATCGATTCAAGG 59.430 45.833 0.00 0.00 0.00 3.61
108 109 5.290643 GTCAGGTTCTTCAGATCGATTCAAG 59.709 44.000 0.00 2.58 0.00 3.02
109 110 5.171476 GTCAGGTTCTTCAGATCGATTCAA 58.829 41.667 0.00 0.00 0.00 2.69
110 111 4.220602 TGTCAGGTTCTTCAGATCGATTCA 59.779 41.667 0.00 0.00 0.00 2.57
111 112 4.564769 GTGTCAGGTTCTTCAGATCGATTC 59.435 45.833 0.00 0.00 0.00 2.52
112 113 4.499183 GTGTCAGGTTCTTCAGATCGATT 58.501 43.478 0.00 0.00 0.00 3.34
113 114 3.118956 GGTGTCAGGTTCTTCAGATCGAT 60.119 47.826 0.00 0.00 0.00 3.59
114 115 2.231478 GGTGTCAGGTTCTTCAGATCGA 59.769 50.000 0.00 0.00 0.00 3.59
115 116 2.029020 TGGTGTCAGGTTCTTCAGATCG 60.029 50.000 0.00 0.00 0.00 3.69
116 117 3.685139 TGGTGTCAGGTTCTTCAGATC 57.315 47.619 0.00 0.00 0.00 2.75
117 118 4.437682 TTTGGTGTCAGGTTCTTCAGAT 57.562 40.909 0.00 0.00 0.00 2.90
118 119 3.924114 TTTGGTGTCAGGTTCTTCAGA 57.076 42.857 0.00 0.00 0.00 3.27
119 120 4.392940 AGATTTGGTGTCAGGTTCTTCAG 58.607 43.478 0.00 0.00 0.00 3.02
120 121 4.389374 GAGATTTGGTGTCAGGTTCTTCA 58.611 43.478 0.00 0.00 0.00 3.02
121 122 3.433615 CGAGATTTGGTGTCAGGTTCTTC 59.566 47.826 0.00 0.00 0.00 2.87
122 123 3.403038 CGAGATTTGGTGTCAGGTTCTT 58.597 45.455 0.00 0.00 0.00 2.52
123 124 2.872038 GCGAGATTTGGTGTCAGGTTCT 60.872 50.000 0.00 0.00 0.00 3.01
124 125 1.464997 GCGAGATTTGGTGTCAGGTTC 59.535 52.381 0.00 0.00 0.00 3.62
125 126 1.072331 AGCGAGATTTGGTGTCAGGTT 59.928 47.619 0.00 0.00 0.00 3.50
126 127 0.687354 AGCGAGATTTGGTGTCAGGT 59.313 50.000 0.00 0.00 0.00 4.00
127 128 1.081892 CAGCGAGATTTGGTGTCAGG 58.918 55.000 0.00 0.00 0.00 3.86
128 129 1.800805 ACAGCGAGATTTGGTGTCAG 58.199 50.000 0.00 0.00 44.06 3.51
129 130 1.872952 CAACAGCGAGATTTGGTGTCA 59.127 47.619 1.97 0.00 46.43 3.58
130 131 1.400242 GCAACAGCGAGATTTGGTGTC 60.400 52.381 1.97 0.00 46.43 3.67
132 133 3.389741 GCAACAGCGAGATTTGGTG 57.610 52.632 0.00 0.00 40.53 4.17
151 152 2.167918 GTTTCTCGTCGTGCGCAC 59.832 61.111 30.42 30.42 41.07 5.34
152 153 3.033764 GGTTTCTCGTCGTGCGCA 61.034 61.111 5.66 5.66 41.07 6.09
153 154 2.807631 TAGGGTTTCTCGTCGTGCGC 62.808 60.000 0.00 0.00 41.07 6.09
154 155 0.387622 TTAGGGTTTCTCGTCGTGCG 60.388 55.000 0.00 0.00 43.01 5.34
155 156 2.005971 ATTAGGGTTTCTCGTCGTGC 57.994 50.000 0.00 0.00 0.00 5.34
156 157 3.861689 GGTTATTAGGGTTTCTCGTCGTG 59.138 47.826 0.00 0.00 0.00 4.35
157 158 3.118992 GGGTTATTAGGGTTTCTCGTCGT 60.119 47.826 0.00 0.00 0.00 4.34
158 159 3.451526 GGGTTATTAGGGTTTCTCGTCG 58.548 50.000 0.00 0.00 0.00 5.12
159 160 3.739209 CGGGGTTATTAGGGTTTCTCGTC 60.739 52.174 0.00 0.00 0.00 4.20
160 161 2.169144 CGGGGTTATTAGGGTTTCTCGT 59.831 50.000 0.00 0.00 0.00 4.18
161 162 2.431782 TCGGGGTTATTAGGGTTTCTCG 59.568 50.000 0.00 0.00 0.00 4.04
162 163 3.739209 CGTCGGGGTTATTAGGGTTTCTC 60.739 52.174 0.00 0.00 0.00 2.87
163 164 2.169144 CGTCGGGGTTATTAGGGTTTCT 59.831 50.000 0.00 0.00 0.00 2.52
164 165 2.554142 CGTCGGGGTTATTAGGGTTTC 58.446 52.381 0.00 0.00 0.00 2.78
165 166 1.407299 GCGTCGGGGTTATTAGGGTTT 60.407 52.381 0.00 0.00 0.00 3.27
166 167 0.178767 GCGTCGGGGTTATTAGGGTT 59.821 55.000 0.00 0.00 0.00 4.11
167 168 0.688749 AGCGTCGGGGTTATTAGGGT 60.689 55.000 0.00 0.00 0.00 4.34
168 169 0.466963 AAGCGTCGGGGTTATTAGGG 59.533 55.000 0.00 0.00 33.83 3.53
169 170 1.861971 GAAGCGTCGGGGTTATTAGG 58.138 55.000 0.00 0.00 36.25 2.69
170 171 1.484356 CGAAGCGTCGGGGTTATTAG 58.516 55.000 14.59 0.00 43.81 1.73
171 172 1.066002 CTCGAAGCGTCGGGGTTATTA 59.934 52.381 21.64 0.00 44.47 0.98
172 173 0.179119 CTCGAAGCGTCGGGGTTATT 60.179 55.000 21.64 0.00 44.47 1.40
173 174 1.436336 CTCGAAGCGTCGGGGTTAT 59.564 57.895 21.64 0.00 44.47 1.89
174 175 2.879907 CTCGAAGCGTCGGGGTTA 59.120 61.111 21.64 1.14 44.47 2.85
184 185 2.511145 CTGCCAGCTCCTCGAAGC 60.511 66.667 0.62 0.62 42.82 3.86
185 186 0.036952 TTTCTGCCAGCTCCTCGAAG 60.037 55.000 0.00 0.00 0.00 3.79
186 187 0.615331 ATTTCTGCCAGCTCCTCGAA 59.385 50.000 0.00 0.00 0.00 3.71
187 188 0.176680 GATTTCTGCCAGCTCCTCGA 59.823 55.000 0.00 0.00 0.00 4.04
188 189 0.177604 AGATTTCTGCCAGCTCCTCG 59.822 55.000 0.00 0.00 0.00 4.63
189 190 1.666054 CAGATTTCTGCCAGCTCCTC 58.334 55.000 0.00 0.00 37.15 3.71
190 191 3.877951 CAGATTTCTGCCAGCTCCT 57.122 52.632 0.00 0.00 37.15 3.69
199 200 0.392193 AGCTCCGGCACAGATTTCTG 60.392 55.000 6.03 6.03 41.94 3.02
200 201 0.107945 GAGCTCCGGCACAGATTTCT 60.108 55.000 0.87 0.00 41.70 2.52
201 202 1.092345 GGAGCTCCGGCACAGATTTC 61.092 60.000 19.06 0.00 41.70 2.17
202 203 1.078143 GGAGCTCCGGCACAGATTT 60.078 57.895 19.06 0.00 41.70 2.17
203 204 2.586792 GGAGCTCCGGCACAGATT 59.413 61.111 19.06 0.00 41.70 2.40
217 218 1.185618 TCGGGATGGATTAGGCGGAG 61.186 60.000 0.00 0.00 0.00 4.63
218 219 1.152419 TCGGGATGGATTAGGCGGA 60.152 57.895 0.00 0.00 0.00 5.54
219 220 1.004918 GTCGGGATGGATTAGGCGG 60.005 63.158 0.00 0.00 0.00 6.13
220 221 1.372997 CGTCGGGATGGATTAGGCG 60.373 63.158 0.00 0.00 0.00 5.52
221 222 0.391597 TTCGTCGGGATGGATTAGGC 59.608 55.000 0.00 0.00 0.00 3.93
222 223 1.602165 CGTTCGTCGGGATGGATTAGG 60.602 57.143 0.00 0.00 35.71 2.69
223 224 1.335810 TCGTTCGTCGGGATGGATTAG 59.664 52.381 0.00 0.00 40.32 1.73
224 225 1.391577 TCGTTCGTCGGGATGGATTA 58.608 50.000 0.00 0.00 40.32 1.75
225 226 0.533491 TTCGTTCGTCGGGATGGATT 59.467 50.000 0.00 0.00 40.32 3.01
226 227 0.179119 GTTCGTTCGTCGGGATGGAT 60.179 55.000 0.00 0.00 40.32 3.41
227 228 1.213537 GTTCGTTCGTCGGGATGGA 59.786 57.895 0.00 0.00 40.32 3.41
228 229 2.156446 CGTTCGTTCGTCGGGATGG 61.156 63.158 0.00 0.00 40.32 3.51
229 230 1.443194 ACGTTCGTTCGTCGGGATG 60.443 57.895 13.50 0.00 40.04 3.51
230 231 1.443194 CACGTTCGTTCGTCGGGAT 60.443 57.895 4.91 0.00 42.27 3.85
231 232 2.051076 CACGTTCGTTCGTCGGGA 60.051 61.111 4.91 0.00 42.27 5.14
232 233 2.051076 TCACGTTCGTTCGTCGGG 60.051 61.111 4.91 10.84 42.27 5.14
233 234 0.658244 TTCTCACGTTCGTTCGTCGG 60.658 55.000 4.91 2.53 42.27 4.79
234 235 0.695943 CTTCTCACGTTCGTTCGTCG 59.304 55.000 4.91 9.57 42.27 5.12
235 236 1.050767 CCTTCTCACGTTCGTTCGTC 58.949 55.000 4.91 0.00 42.27 4.20
236 237 0.664761 TCCTTCTCACGTTCGTTCGT 59.335 50.000 0.00 2.38 45.10 3.85
237 238 1.912110 GATCCTTCTCACGTTCGTTCG 59.088 52.381 0.00 1.21 0.00 3.95
238 239 1.912110 CGATCCTTCTCACGTTCGTTC 59.088 52.381 0.00 0.00 0.00 3.95
239 240 1.402456 CCGATCCTTCTCACGTTCGTT 60.402 52.381 0.00 0.00 0.00 3.85
240 241 0.170561 CCGATCCTTCTCACGTTCGT 59.829 55.000 1.89 0.00 0.00 3.85
241 242 0.450583 TCCGATCCTTCTCACGTTCG 59.549 55.000 0.00 0.00 0.00 3.95
242 243 1.799548 GCTCCGATCCTTCTCACGTTC 60.800 57.143 0.00 0.00 0.00 3.95
243 244 0.173708 GCTCCGATCCTTCTCACGTT 59.826 55.000 0.00 0.00 0.00 3.99
244 245 1.668101 GGCTCCGATCCTTCTCACGT 61.668 60.000 0.00 0.00 0.00 4.49
245 246 1.066587 GGCTCCGATCCTTCTCACG 59.933 63.158 0.00 0.00 0.00 4.35
246 247 0.103937 CAGGCTCCGATCCTTCTCAC 59.896 60.000 0.00 0.00 0.00 3.51
247 248 1.045350 CCAGGCTCCGATCCTTCTCA 61.045 60.000 0.00 0.00 0.00 3.27
248 249 0.757188 TCCAGGCTCCGATCCTTCTC 60.757 60.000 0.00 0.00 0.00 2.87
249 250 0.325671 TTCCAGGCTCCGATCCTTCT 60.326 55.000 0.00 0.00 0.00 2.85
250 251 0.105778 CTTCCAGGCTCCGATCCTTC 59.894 60.000 0.00 0.00 0.00 3.46
251 252 0.325671 TCTTCCAGGCTCCGATCCTT 60.326 55.000 0.00 0.00 0.00 3.36
252 253 1.045911 GTCTTCCAGGCTCCGATCCT 61.046 60.000 0.00 0.00 0.00 3.24
253 254 1.045911 AGTCTTCCAGGCTCCGATCC 61.046 60.000 0.00 0.00 0.00 3.36
254 255 0.103937 CAGTCTTCCAGGCTCCGATC 59.896 60.000 0.00 0.00 0.00 3.69
255 256 0.324738 TCAGTCTTCCAGGCTCCGAT 60.325 55.000 0.00 0.00 0.00 4.18
256 257 0.324738 ATCAGTCTTCCAGGCTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
257 258 0.539051 AATCAGTCTTCCAGGCTCCG 59.461 55.000 0.00 0.00 0.00 4.63
258 259 1.556911 TGAATCAGTCTTCCAGGCTCC 59.443 52.381 0.00 0.00 0.00 4.70
259 260 3.340814 TTGAATCAGTCTTCCAGGCTC 57.659 47.619 0.00 0.00 0.00 4.70
260 261 3.328931 TCTTTGAATCAGTCTTCCAGGCT 59.671 43.478 0.00 0.00 0.00 4.58
261 262 3.438434 GTCTTTGAATCAGTCTTCCAGGC 59.562 47.826 0.00 0.00 0.00 4.85
262 263 3.681897 CGTCTTTGAATCAGTCTTCCAGG 59.318 47.826 0.00 0.00 0.00 4.45
263 264 4.560128 TCGTCTTTGAATCAGTCTTCCAG 58.440 43.478 0.00 0.00 0.00 3.86
264 265 4.600692 TCGTCTTTGAATCAGTCTTCCA 57.399 40.909 0.00 0.00 0.00 3.53
265 266 4.143009 GCTTCGTCTTTGAATCAGTCTTCC 60.143 45.833 0.00 0.00 0.00 3.46
266 267 4.433544 CGCTTCGTCTTTGAATCAGTCTTC 60.434 45.833 0.00 0.00 0.00 2.87
267 268 3.430218 CGCTTCGTCTTTGAATCAGTCTT 59.570 43.478 0.00 0.00 0.00 3.01
268 269 2.989840 CGCTTCGTCTTTGAATCAGTCT 59.010 45.455 0.00 0.00 0.00 3.24
269 270 2.473049 GCGCTTCGTCTTTGAATCAGTC 60.473 50.000 0.00 0.00 0.00 3.51
270 271 1.461127 GCGCTTCGTCTTTGAATCAGT 59.539 47.619 0.00 0.00 0.00 3.41
271 272 1.201965 GGCGCTTCGTCTTTGAATCAG 60.202 52.381 7.64 0.00 0.00 2.90
272 273 0.796312 GGCGCTTCGTCTTTGAATCA 59.204 50.000 7.64 0.00 0.00 2.57
273 274 0.247301 CGGCGCTTCGTCTTTGAATC 60.247 55.000 7.64 0.00 0.00 2.52
274 275 1.787847 CGGCGCTTCGTCTTTGAAT 59.212 52.632 7.64 0.00 0.00 2.57
275 276 2.950172 GCGGCGCTTCGTCTTTGAA 61.950 57.895 26.86 0.00 0.00 2.69
276 277 3.411351 GCGGCGCTTCGTCTTTGA 61.411 61.111 26.86 0.00 0.00 2.69
277 278 4.445545 GGCGGCGCTTCGTCTTTG 62.446 66.667 32.30 0.00 0.00 2.77
278 279 4.980805 TGGCGGCGCTTCGTCTTT 62.981 61.111 32.30 0.00 35.57 2.52
279 280 4.760047 ATGGCGGCGCTTCGTCTT 62.760 61.111 32.30 9.72 35.57 3.01
284 285 3.654020 GATGGATGGCGGCGCTTC 61.654 66.667 32.30 25.98 0.00 3.86
285 286 4.181010 AGATGGATGGCGGCGCTT 62.181 61.111 32.30 19.61 0.00 4.68
286 287 4.923942 CAGATGGATGGCGGCGCT 62.924 66.667 32.30 13.54 0.00 5.92
287 288 4.916293 TCAGATGGATGGCGGCGC 62.916 66.667 26.17 26.17 0.00 6.53
288 289 2.664185 CTCAGATGGATGGCGGCG 60.664 66.667 0.51 0.51 0.00 6.46
289 290 2.976903 GCTCAGATGGATGGCGGC 60.977 66.667 0.00 0.00 0.00 6.53
290 291 2.664185 CGCTCAGATGGATGGCGG 60.664 66.667 0.00 0.00 41.77 6.13
292 293 2.976903 GGCGCTCAGATGGATGGC 60.977 66.667 7.64 0.00 0.00 4.40
293 294 2.664185 CGGCGCTCAGATGGATGG 60.664 66.667 7.64 0.00 0.00 3.51
294 295 3.344215 GCGGCGCTCAGATGGATG 61.344 66.667 26.86 0.00 0.00 3.51
295 296 4.615815 GGCGGCGCTCAGATGGAT 62.616 66.667 32.30 0.00 0.00 3.41
298 299 4.845580 AAGGGCGGCGCTCAGATG 62.846 66.667 35.32 0.00 0.00 2.90
299 300 4.845580 CAAGGGCGGCGCTCAGAT 62.846 66.667 35.32 17.03 0.00 2.90
310 311 0.387565 TTTTTGGTTCTCGCAAGGGC 59.612 50.000 0.00 0.00 38.17 5.19
311 312 1.269569 GGTTTTTGGTTCTCGCAAGGG 60.270 52.381 0.00 0.00 41.48 3.95
312 313 1.681264 AGGTTTTTGGTTCTCGCAAGG 59.319 47.619 0.00 0.00 38.47 3.61
313 314 3.304458 GGTAGGTTTTTGGTTCTCGCAAG 60.304 47.826 0.00 0.00 0.00 4.01
314 315 2.619646 GGTAGGTTTTTGGTTCTCGCAA 59.380 45.455 0.00 0.00 0.00 4.85
315 316 2.223745 GGTAGGTTTTTGGTTCTCGCA 58.776 47.619 0.00 0.00 0.00 5.10
316 317 1.538512 GGGTAGGTTTTTGGTTCTCGC 59.461 52.381 0.00 0.00 0.00 5.03
317 318 3.136009 AGGGTAGGTTTTTGGTTCTCG 57.864 47.619 0.00 0.00 0.00 4.04
318 319 6.063496 AGATAGGGTAGGTTTTTGGTTCTC 57.937 41.667 0.00 0.00 0.00 2.87
319 320 7.578458 TTAGATAGGGTAGGTTTTTGGTTCT 57.422 36.000 0.00 0.00 0.00 3.01
320 321 6.318144 GCTTAGATAGGGTAGGTTTTTGGTTC 59.682 42.308 0.00 0.00 0.00 3.62
321 322 6.185511 GCTTAGATAGGGTAGGTTTTTGGTT 58.814 40.000 0.00 0.00 0.00 3.67
322 323 5.339778 GGCTTAGATAGGGTAGGTTTTTGGT 60.340 44.000 0.00 0.00 0.00 3.67
323 324 5.131067 GGCTTAGATAGGGTAGGTTTTTGG 58.869 45.833 0.00 0.00 0.00 3.28
324 325 4.814771 CGGCTTAGATAGGGTAGGTTTTTG 59.185 45.833 0.00 0.00 0.00 2.44
325 326 4.718276 TCGGCTTAGATAGGGTAGGTTTTT 59.282 41.667 0.00 0.00 0.00 1.94
326 327 4.292643 TCGGCTTAGATAGGGTAGGTTTT 58.707 43.478 0.00 0.00 0.00 2.43
327 328 3.896272 CTCGGCTTAGATAGGGTAGGTTT 59.104 47.826 0.00 0.00 0.00 3.27
328 329 3.498334 CTCGGCTTAGATAGGGTAGGTT 58.502 50.000 0.00 0.00 0.00 3.50
329 330 2.225066 CCTCGGCTTAGATAGGGTAGGT 60.225 54.545 0.00 0.00 0.00 3.08
330 331 2.448453 CCTCGGCTTAGATAGGGTAGG 58.552 57.143 0.00 0.00 0.00 3.18
331 332 1.819903 GCCTCGGCTTAGATAGGGTAG 59.180 57.143 0.00 0.00 38.26 3.18
332 333 1.146359 TGCCTCGGCTTAGATAGGGTA 59.854 52.381 9.65 0.00 42.51 3.69
333 334 0.105658 TGCCTCGGCTTAGATAGGGT 60.106 55.000 9.65 0.00 42.51 4.34
334 335 0.318762 GTGCCTCGGCTTAGATAGGG 59.681 60.000 9.65 0.00 42.51 3.53
335 336 0.318762 GGTGCCTCGGCTTAGATAGG 59.681 60.000 9.65 0.00 42.51 2.57
336 337 1.040646 TGGTGCCTCGGCTTAGATAG 58.959 55.000 9.65 0.00 42.51 2.08
337 338 1.491668 TTGGTGCCTCGGCTTAGATA 58.508 50.000 9.65 0.00 42.51 1.98
338 339 0.618458 TTTGGTGCCTCGGCTTAGAT 59.382 50.000 9.65 0.00 42.51 1.98
339 340 0.398696 TTTTGGTGCCTCGGCTTAGA 59.601 50.000 9.65 0.00 42.51 2.10
340 341 1.243902 TTTTTGGTGCCTCGGCTTAG 58.756 50.000 9.65 0.00 42.51 2.18
341 342 1.917872 ATTTTTGGTGCCTCGGCTTA 58.082 45.000 9.65 0.00 42.51 3.09
342 343 1.544246 GTATTTTTGGTGCCTCGGCTT 59.456 47.619 9.65 0.00 42.51 4.35
343 344 1.173913 GTATTTTTGGTGCCTCGGCT 58.826 50.000 9.65 0.00 42.51 5.52
344 345 0.172578 GGTATTTTTGGTGCCTCGGC 59.827 55.000 0.00 0.00 42.35 5.54
345 346 0.815095 GGGTATTTTTGGTGCCTCGG 59.185 55.000 0.00 0.00 0.00 4.63
346 347 0.815095 GGGGTATTTTTGGTGCCTCG 59.185 55.000 0.00 0.00 0.00 4.63
347 348 0.815095 CGGGGTATTTTTGGTGCCTC 59.185 55.000 0.00 0.00 0.00 4.70
348 349 1.254975 GCGGGGTATTTTTGGTGCCT 61.255 55.000 0.00 0.00 0.00 4.75
349 350 1.216977 GCGGGGTATTTTTGGTGCC 59.783 57.895 0.00 0.00 0.00 5.01
350 351 1.216977 GGCGGGGTATTTTTGGTGC 59.783 57.895 0.00 0.00 0.00 5.01
351 352 0.245266 GTGGCGGGGTATTTTTGGTG 59.755 55.000 0.00 0.00 0.00 4.17
352 353 0.178958 TGTGGCGGGGTATTTTTGGT 60.179 50.000 0.00 0.00 0.00 3.67
353 354 0.530288 CTGTGGCGGGGTATTTTTGG 59.470 55.000 0.00 0.00 0.00 3.28
354 355 0.530288 CCTGTGGCGGGGTATTTTTG 59.470 55.000 0.00 0.00 0.00 2.44
355 356 1.254975 GCCTGTGGCGGGGTATTTTT 61.255 55.000 0.00 0.00 39.62 1.94
356 357 1.680989 GCCTGTGGCGGGGTATTTT 60.681 57.895 0.00 0.00 39.62 1.82
357 358 2.044352 GCCTGTGGCGGGGTATTT 60.044 61.111 0.00 0.00 39.62 1.40
378 379 4.760047 CCTCCACCTGCCGTTCCG 62.760 72.222 0.00 0.00 0.00 4.30
379 380 4.410400 CCCTCCACCTGCCGTTCC 62.410 72.222 0.00 0.00 0.00 3.62
380 381 4.410400 CCCCTCCACCTGCCGTTC 62.410 72.222 0.00 0.00 0.00 3.95
381 382 4.974438 TCCCCTCCACCTGCCGTT 62.974 66.667 0.00 0.00 0.00 4.44
387 388 3.642741 ATTCGCCTCCCCTCCACCT 62.643 63.158 0.00 0.00 0.00 4.00
388 389 2.610532 GAATTCGCCTCCCCTCCACC 62.611 65.000 0.00 0.00 0.00 4.61
389 390 1.153147 GAATTCGCCTCCCCTCCAC 60.153 63.158 0.00 0.00 0.00 4.02
390 391 1.615124 TGAATTCGCCTCCCCTCCA 60.615 57.895 0.04 0.00 0.00 3.86
391 392 1.153147 GTGAATTCGCCTCCCCTCC 60.153 63.158 7.83 0.00 0.00 4.30
392 393 1.521681 CGTGAATTCGCCTCCCCTC 60.522 63.158 13.25 0.00 0.00 4.30
393 394 2.584608 CGTGAATTCGCCTCCCCT 59.415 61.111 13.25 0.00 0.00 4.79
394 395 2.513897 CCGTGAATTCGCCTCCCC 60.514 66.667 13.25 0.00 0.00 4.81
395 396 2.513897 CCCGTGAATTCGCCTCCC 60.514 66.667 13.25 0.00 0.00 4.30
396 397 3.202706 GCCCGTGAATTCGCCTCC 61.203 66.667 13.25 0.00 0.00 4.30
397 398 2.125106 AGCCCGTGAATTCGCCTC 60.125 61.111 13.25 3.02 0.00 4.70
398 399 2.125106 GAGCCCGTGAATTCGCCT 60.125 61.111 13.25 4.80 0.00 5.52
399 400 3.564027 CGAGCCCGTGAATTCGCC 61.564 66.667 13.25 0.00 0.00 5.54
401 402 3.564027 GGCGAGCCCGTGAATTCG 61.564 66.667 1.97 0.00 38.24 3.34
410 411 4.162690 ATCTTCACCGGCGAGCCC 62.163 66.667 9.30 0.00 0.00 5.19
411 412 2.586357 GATCTTCACCGGCGAGCC 60.586 66.667 9.30 3.59 0.00 4.70
412 413 2.884087 TTCGATCTTCACCGGCGAGC 62.884 60.000 9.30 0.00 32.22 5.03
413 414 0.867753 CTTCGATCTTCACCGGCGAG 60.868 60.000 9.30 0.06 32.22 5.03
414 415 1.138883 CTTCGATCTTCACCGGCGA 59.861 57.895 9.30 0.00 0.00 5.54
415 416 1.878522 CCTTCGATCTTCACCGGCG 60.879 63.158 0.00 0.00 0.00 6.46
416 417 0.108329 TTCCTTCGATCTTCACCGGC 60.108 55.000 0.00 0.00 0.00 6.13
417 418 2.380084 TTTCCTTCGATCTTCACCGG 57.620 50.000 0.00 0.00 0.00 5.28
438 439 2.160205 GCGACTAGGGAAAGCCTTTTT 58.840 47.619 0.00 0.00 0.00 1.94
439 440 1.613520 GGCGACTAGGGAAAGCCTTTT 60.614 52.381 0.00 0.00 44.06 2.27
440 441 0.035343 GGCGACTAGGGAAAGCCTTT 60.035 55.000 0.00 0.00 44.06 3.11
441 442 1.602771 GGCGACTAGGGAAAGCCTT 59.397 57.895 0.00 0.00 44.06 4.35
442 443 3.310652 GGCGACTAGGGAAAGCCT 58.689 61.111 0.00 0.00 44.06 4.58
444 445 1.153349 CCAGGCGACTAGGGAAAGC 60.153 63.158 0.00 0.00 40.21 3.51
445 446 1.153349 GCCAGGCGACTAGGGAAAG 60.153 63.158 0.00 0.00 40.21 2.62
446 447 1.485294 TTGCCAGGCGACTAGGGAAA 61.485 55.000 7.03 0.00 40.21 3.13
447 448 1.899437 CTTGCCAGGCGACTAGGGAA 61.899 60.000 7.03 11.92 40.21 3.97
448 449 2.284331 TTGCCAGGCGACTAGGGA 60.284 61.111 7.03 0.00 40.21 4.20
449 450 1.899437 TTCTTGCCAGGCGACTAGGG 61.899 60.000 7.03 0.00 40.21 3.53
450 451 0.460987 CTTCTTGCCAGGCGACTAGG 60.461 60.000 7.03 0.00 40.21 3.02
451 452 0.247736 ACTTCTTGCCAGGCGACTAG 59.752 55.000 7.03 5.39 40.21 2.57
452 453 0.037326 CACTTCTTGCCAGGCGACTA 60.037 55.000 7.03 0.00 40.21 2.59
453 454 1.302033 CACTTCTTGCCAGGCGACT 60.302 57.895 7.03 0.00 46.44 4.18
454 455 0.884704 TTCACTTCTTGCCAGGCGAC 60.885 55.000 7.03 0.00 0.00 5.19
455 456 0.884704 GTTCACTTCTTGCCAGGCGA 60.885 55.000 7.03 3.46 0.00 5.54
456 457 1.165907 TGTTCACTTCTTGCCAGGCG 61.166 55.000 7.03 0.00 0.00 5.52
457 458 1.251251 ATGTTCACTTCTTGCCAGGC 58.749 50.000 3.66 3.66 0.00 4.85
458 459 6.757897 TTATAATGTTCACTTCTTGCCAGG 57.242 37.500 0.00 0.00 0.00 4.45
528 529 2.028839 CCAATCATTTGGCTTGCAGACA 60.029 45.455 0.00 0.00 45.71 3.41
595 596 8.947115 CGGAGGAAGTAATATTTTCTTTGTCTT 58.053 33.333 0.00 0.00 0.00 3.01
599 601 9.556030 GAAACGGAGGAAGTAATATTTTCTTTG 57.444 33.333 0.00 0.00 0.00 2.77
684 1021 4.416620 CACGAGTTTGACTGAGGAGTATC 58.583 47.826 0.00 0.00 30.16 2.24
698 1044 1.935933 ACGAGAGTTTGCACGAGTTT 58.064 45.000 0.00 0.00 46.40 2.66
699 1045 3.661745 ACGAGAGTTTGCACGAGTT 57.338 47.368 0.00 0.00 46.40 3.01
711 1057 2.592993 TTGGGCAGGGGAACGAGAG 61.593 63.158 0.00 0.00 0.00 3.20
712 1058 2.528127 TTGGGCAGGGGAACGAGA 60.528 61.111 0.00 0.00 0.00 4.04
713 1059 2.359975 GTTGGGCAGGGGAACGAG 60.360 66.667 0.00 0.00 0.00 4.18
715 1061 2.672996 CAGTTGGGCAGGGGAACG 60.673 66.667 0.00 0.00 0.00 3.95
716 1062 0.759060 AAACAGTTGGGCAGGGGAAC 60.759 55.000 0.00 0.00 0.00 3.62
717 1063 0.854218 TAAACAGTTGGGCAGGGGAA 59.146 50.000 0.00 0.00 0.00 3.97
718 1064 1.005450 GATAAACAGTTGGGCAGGGGA 59.995 52.381 0.00 0.00 0.00 4.81
719 1065 1.272425 TGATAAACAGTTGGGCAGGGG 60.272 52.381 0.00 0.00 0.00 4.79
720 1066 2.214376 TGATAAACAGTTGGGCAGGG 57.786 50.000 0.00 0.00 0.00 4.45
721 1067 3.320541 TGTTTGATAAACAGTTGGGCAGG 59.679 43.478 3.20 0.00 45.79 4.85
722 1068 4.582701 TGTTTGATAAACAGTTGGGCAG 57.417 40.909 3.20 0.00 45.79 4.85
737 1083 9.616156 TTTAGATTACTACAACAACCTGTTTGA 57.384 29.630 0.00 0.00 38.77 2.69
738 1084 9.659830 GTTTAGATTACTACAACAACCTGTTTG 57.340 33.333 0.00 0.00 38.77 2.93
739 1085 8.553696 CGTTTAGATTACTACAACAACCTGTTT 58.446 33.333 0.00 0.00 38.77 2.83
740 1086 7.172019 CCGTTTAGATTACTACAACAACCTGTT 59.828 37.037 0.00 0.00 42.08 3.16
741 1087 6.647895 CCGTTTAGATTACTACAACAACCTGT 59.352 38.462 0.00 0.00 0.00 4.00
743 1089 6.762333 ACCGTTTAGATTACTACAACAACCT 58.238 36.000 0.00 0.00 0.00 3.50
744 1090 6.870439 AGACCGTTTAGATTACTACAACAACC 59.130 38.462 0.00 0.00 0.00 3.77
758 1198 9.374838 GGTGAAAGAAATATAAGACCGTTTAGA 57.625 33.333 0.00 0.00 0.00 2.10
760 1200 8.034215 TCGGTGAAAGAAATATAAGACCGTTTA 58.966 33.333 0.00 0.00 44.28 2.01
763 1203 5.969423 TCGGTGAAAGAAATATAAGACCGT 58.031 37.500 0.00 0.00 44.28 4.83
764 1204 5.462398 CCTCGGTGAAAGAAATATAAGACCG 59.538 44.000 0.00 0.00 45.08 4.79
767 1207 6.407752 GGTCCCTCGGTGAAAGAAATATAAGA 60.408 42.308 0.00 0.00 0.00 2.10
774 1214 1.346722 GAGGTCCCTCGGTGAAAGAAA 59.653 52.381 0.00 0.00 33.06 2.52
776 1216 2.667348 GAGGTCCCTCGGTGAAAGA 58.333 57.895 0.00 0.00 33.06 2.52
861 1307 2.359900 GTGTAGCTTTGTCCATCAGGG 58.640 52.381 0.00 0.00 34.83 4.45
866 1312 3.247006 CGTAGGTGTAGCTTTGTCCAT 57.753 47.619 0.00 0.00 0.00 3.41
960 1406 5.124776 TGCCCTTTTTATAGGTGACGAATTG 59.875 40.000 0.00 0.00 33.17 2.32
966 1415 3.442625 GTGGTGCCCTTTTTATAGGTGAC 59.557 47.826 0.00 0.00 33.17 3.67
1004 1453 0.463116 TCCGCGGAAATAAAGAGGGC 60.463 55.000 28.99 0.00 0.00 5.19
1048 1497 1.257750 GGGGAAAGGAAAGGCGCAAT 61.258 55.000 10.83 0.00 0.00 3.56
1521 1997 1.515952 CACTCGCCTTCTCGCTCAG 60.516 63.158 0.00 0.00 0.00 3.35
1550 2026 2.971452 GTCTCCGGGCTCGACTTT 59.029 61.111 8.08 0.00 39.00 2.66
1551 2027 3.441290 CGTCTCCGGGCTCGACTT 61.441 66.667 8.08 0.00 39.00 3.01
1781 2257 2.475487 GAGGAACTGGAAAACGAGAACG 59.525 50.000 0.00 0.00 41.55 3.95
1832 2316 4.457603 CGTCAAAGGATCGGAGAGAGATAT 59.542 45.833 0.00 0.00 43.63 1.63
1907 2393 0.749818 TTCGTGGGCAAAAGTGAGCA 60.750 50.000 0.00 0.00 0.00 4.26
1931 2418 4.370917 ACGCAGCAAAATCATTTTTCAGT 58.629 34.783 0.00 0.00 32.72 3.41
1933 2420 5.731599 AAACGCAGCAAAATCATTTTTCA 57.268 30.435 0.00 0.00 32.72 2.69
1946 2434 3.784701 TTTTCCAGTAAAAACGCAGCA 57.215 38.095 0.00 0.00 34.11 4.41
1993 2491 0.036858 TGGGAACGCATCAACGATGA 60.037 50.000 8.14 0.00 42.09 2.92
2061 2559 4.384547 GCGCGTGGAGATTAATTTGTTTTT 59.615 37.500 8.43 0.00 0.00 1.94
2062 2560 3.917985 GCGCGTGGAGATTAATTTGTTTT 59.082 39.130 8.43 0.00 0.00 2.43
2063 2561 3.498082 GCGCGTGGAGATTAATTTGTTT 58.502 40.909 8.43 0.00 0.00 2.83
2064 2562 2.159435 GGCGCGTGGAGATTAATTTGTT 60.159 45.455 8.43 0.00 0.00 2.83
2065 2563 1.400494 GGCGCGTGGAGATTAATTTGT 59.600 47.619 8.43 0.00 0.00 2.83
2066 2564 1.268539 GGGCGCGTGGAGATTAATTTG 60.269 52.381 8.43 0.00 0.00 2.32
2067 2565 1.021968 GGGCGCGTGGAGATTAATTT 58.978 50.000 8.43 0.00 0.00 1.82
2068 2566 1.157870 CGGGCGCGTGGAGATTAATT 61.158 55.000 15.94 0.00 0.00 1.40
2069 2567 1.594293 CGGGCGCGTGGAGATTAAT 60.594 57.895 15.94 0.00 0.00 1.40
2111 2614 1.433199 TCTCTGGGACTGGGAAGAAGA 59.567 52.381 0.00 0.00 32.57 2.87
2112 2615 1.830477 CTCTCTGGGACTGGGAAGAAG 59.170 57.143 0.00 0.00 36.03 2.85
2113 2616 1.150135 ACTCTCTGGGACTGGGAAGAA 59.850 52.381 0.00 0.00 36.03 2.52
2114 2617 0.787084 ACTCTCTGGGACTGGGAAGA 59.213 55.000 0.00 0.00 36.03 2.87
2206 2722 2.189191 TACAGCAAGCAGAGCCAGGG 62.189 60.000 0.00 0.00 0.00 4.45
2222 2738 0.105964 AGTCTGCAACAACGCCTACA 59.894 50.000 0.00 0.00 0.00 2.74
2228 2744 0.439985 CCGATGAGTCTGCAACAACG 59.560 55.000 0.00 0.00 0.00 4.10
2236 2752 0.879400 GCAGGCATCCGATGAGTCTG 60.879 60.000 12.79 14.91 0.00 3.51
2395 3073 8.095169 AGGAAACAGTTACTACTAGTGGATTTG 58.905 37.037 13.86 7.97 31.96 2.32
2396 3074 8.095169 CAGGAAACAGTTACTACTAGTGGATTT 58.905 37.037 13.86 3.72 31.96 2.17
2485 3171 2.069273 AGCAAACAAGACGGAATCGAG 58.931 47.619 0.00 0.00 40.11 4.04
2486 3172 1.798223 CAGCAAACAAGACGGAATCGA 59.202 47.619 0.00 0.00 40.11 3.59
2487 3173 1.531149 ACAGCAAACAAGACGGAATCG 59.469 47.619 0.00 0.00 43.02 3.34
2488 3174 2.548057 TGACAGCAAACAAGACGGAATC 59.452 45.455 0.00 0.00 0.00 2.52
2573 3259 2.825205 ACATTGCAAAACTCAACTGGC 58.175 42.857 1.71 0.00 0.00 4.85
2624 3313 2.762234 GCTCCTGCACAGCATCAGC 61.762 63.158 7.86 6.57 38.13 4.26
2713 3402 3.000322 CGATCGCCTGCTACTTTTAGTTG 60.000 47.826 0.26 0.00 0.00 3.16
2720 3409 1.066587 GCTCGATCGCCTGCTACTT 59.933 57.895 11.09 0.00 0.00 2.24
2800 3531 2.828661 AATCCCCCTTTGTCTAAGCC 57.171 50.000 0.00 0.00 32.19 4.35
2997 3728 6.644248 ATCATCCACAATTCCACATACATG 57.356 37.500 0.00 0.00 0.00 3.21
3003 3734 4.567971 GCAAAATCATCCACAATTCCACA 58.432 39.130 0.00 0.00 0.00 4.17
3043 3774 8.506437 TGCTAAAATCATTCATGGACGATTATC 58.494 33.333 0.00 0.00 0.00 1.75
3044 3775 8.394971 TGCTAAAATCATTCATGGACGATTAT 57.605 30.769 0.00 0.00 0.00 1.28
3144 3888 2.091277 GTCAGTTCATTTCGACAGAGCG 59.909 50.000 0.00 0.00 0.00 5.03
3237 3987 9.734620 CATTGTAGTTTTTGAGAAAGATTGACA 57.265 29.630 0.00 0.00 0.00 3.58
3239 3989 9.950680 GACATTGTAGTTTTTGAGAAAGATTGA 57.049 29.630 0.00 0.00 0.00 2.57
3312 4072 0.679640 TGGTGGCAATTCCGGATGAC 60.680 55.000 4.15 3.92 37.80 3.06
3315 4075 0.033208 ATGTGGTGGCAATTCCGGAT 60.033 50.000 4.15 0.00 37.80 4.18
3344 4104 3.411875 ACCCGATAGACTTTGGGGT 57.588 52.632 12.02 12.02 46.18 4.95
3352 4112 9.597170 AGAAAATTAGTAAGAAACCCGATAGAC 57.403 33.333 0.00 0.00 39.76 2.59
3353 4113 9.813446 GAGAAAATTAGTAAGAAACCCGATAGA 57.187 33.333 0.00 0.00 39.76 1.98
3354 4114 9.595823 TGAGAAAATTAGTAAGAAACCCGATAG 57.404 33.333 0.00 0.00 0.00 2.08
3355 4115 9.947433 TTGAGAAAATTAGTAAGAAACCCGATA 57.053 29.630 0.00 0.00 0.00 2.92
3356 4116 8.857694 TTGAGAAAATTAGTAAGAAACCCGAT 57.142 30.769 0.00 0.00 0.00 4.18
3357 4117 8.857694 ATTGAGAAAATTAGTAAGAAACCCGA 57.142 30.769 0.00 0.00 0.00 5.14
3398 4159 9.410556 CAGAAATCGGATTAAAACAGTTCAAAT 57.589 29.630 3.22 0.00 0.00 2.32
3405 4166 7.530010 ACATGTCAGAAATCGGATTAAAACAG 58.470 34.615 3.22 4.42 0.00 3.16
3445 4207 4.908687 TTGTGCCACGTCAGCGCT 62.909 61.111 18.43 2.64 41.34 5.92
3446 4208 3.462333 TTTTGTGCCACGTCAGCGC 62.462 57.895 12.56 12.56 42.83 5.92
3448 4210 1.654137 CGTTTTGTGCCACGTCAGC 60.654 57.895 0.04 0.04 0.00 4.26
3467 4229 2.218603 GGTCAATGTCGTTTGTCTGGT 58.781 47.619 0.00 0.00 0.00 4.00
3471 4233 2.032030 CACCTGGTCAATGTCGTTTGTC 60.032 50.000 0.00 0.00 0.00 3.18
3479 4241 0.401738 CCACCTCACCTGGTCAATGT 59.598 55.000 0.00 0.00 38.45 2.71
3519 4429 2.529389 AGGCTCCGTTCAACCCCT 60.529 61.111 0.00 0.00 0.00 4.79
3523 4433 3.119096 GGCGAGGCTCCGTTCAAC 61.119 66.667 9.32 0.00 0.00 3.18
3687 4597 2.435059 GACAAGCCTGGACGGAGC 60.435 66.667 0.00 0.00 33.16 4.70
3700 4610 1.003355 GGTAGCAGCAGCAGGACAA 60.003 57.895 3.17 0.00 45.49 3.18
3741 4651 4.293648 TGTCGTGTGGAGCCACCG 62.294 66.667 16.50 17.56 45.63 4.94
3742 4652 2.660258 AAGTGTCGTGTGGAGCCACC 62.660 60.000 16.50 7.48 45.63 4.61
3743 4653 1.222115 GAAGTGTCGTGTGGAGCCAC 61.222 60.000 12.66 12.66 46.33 5.01
3744 4654 1.069090 GAAGTGTCGTGTGGAGCCA 59.931 57.895 0.00 0.00 0.00 4.75
3745 4655 1.668151 GGAAGTGTCGTGTGGAGCC 60.668 63.158 0.00 0.00 0.00 4.70
3746 4656 1.668151 GGGAAGTGTCGTGTGGAGC 60.668 63.158 0.00 0.00 0.00 4.70
3747 4657 0.600255 GTGGGAAGTGTCGTGTGGAG 60.600 60.000 0.00 0.00 0.00 3.86
3748 4658 1.444250 GTGGGAAGTGTCGTGTGGA 59.556 57.895 0.00 0.00 0.00 4.02
3749 4659 1.954146 CGTGGGAAGTGTCGTGTGG 60.954 63.158 0.00 0.00 0.00 4.17
3750 4660 2.594962 GCGTGGGAAGTGTCGTGTG 61.595 63.158 0.00 0.00 0.00 3.82
3751 4661 2.279918 GCGTGGGAAGTGTCGTGT 60.280 61.111 0.00 0.00 0.00 4.49
3752 4662 1.667830 ATGCGTGGGAAGTGTCGTG 60.668 57.895 0.00 0.00 0.00 4.35
3753 4663 1.667830 CATGCGTGGGAAGTGTCGT 60.668 57.895 0.00 0.00 0.00 4.34
3754 4664 2.390599 CCATGCGTGGGAAGTGTCG 61.391 63.158 17.90 0.00 42.11 4.35
3755 4665 2.690778 GCCATGCGTGGGAAGTGTC 61.691 63.158 26.22 3.88 46.14 3.67
3756 4666 2.672996 GCCATGCGTGGGAAGTGT 60.673 61.111 26.22 0.00 46.14 3.55
3758 4668 3.210012 AAGGCCATGCGTGGGAAGT 62.210 57.895 26.22 0.00 46.14 3.01
3762 4672 2.361610 AAGAAGGCCATGCGTGGG 60.362 61.111 26.22 8.46 46.14 4.61
3766 4676 0.813210 GAGGAGAAGAAGGCCATGCG 60.813 60.000 5.01 0.00 0.00 4.73
3768 4678 1.134159 CAGGAGGAGAAGAAGGCCATG 60.134 57.143 5.01 0.00 0.00 3.66
3769 4679 1.211456 CAGGAGGAGAAGAAGGCCAT 58.789 55.000 5.01 0.00 0.00 4.40
3776 4686 0.251386 AGCACGTCAGGAGGAGAAGA 60.251 55.000 0.00 0.00 0.00 2.87
3779 4689 1.979155 CCAGCACGTCAGGAGGAGA 60.979 63.158 0.00 0.00 0.00 3.71
3782 4692 1.079543 CTTCCAGCACGTCAGGAGG 60.080 63.158 0.00 0.00 31.55 4.30
3787 4697 1.672030 CATGGCTTCCAGCACGTCA 60.672 57.895 0.00 0.00 44.75 4.35
3795 4707 2.891941 GATGTCGGCCATGGCTTCCA 62.892 60.000 34.70 26.27 41.60 3.53
3799 4711 2.507944 GAGATGTCGGCCATGGCT 59.492 61.111 34.70 16.32 41.60 4.75
3803 4715 2.811514 ATGCGGAGATGTCGGCCAT 61.812 57.895 17.98 9.79 46.01 4.40
3810 4722 0.749649 GAGGAGTCATGCGGAGATGT 59.250 55.000 0.00 0.00 0.00 3.06
3812 4724 1.118356 GGGAGGAGTCATGCGGAGAT 61.118 60.000 0.00 0.00 0.00 2.75
3813 4725 1.758514 GGGAGGAGTCATGCGGAGA 60.759 63.158 0.00 0.00 0.00 3.71
3844 4756 0.738389 CATGGGTTGTATTGTCGGGC 59.262 55.000 0.00 0.00 0.00 6.13
3847 4759 1.750193 AGGCATGGGTTGTATTGTCG 58.250 50.000 0.00 0.00 0.00 4.35
3852 4764 4.273318 GAAGAGAAAGGCATGGGTTGTAT 58.727 43.478 0.00 0.00 0.00 2.29
3856 4768 1.614317 CGGAAGAGAAAGGCATGGGTT 60.614 52.381 0.00 0.00 0.00 4.11
3857 4769 0.035056 CGGAAGAGAAAGGCATGGGT 60.035 55.000 0.00 0.00 0.00 4.51
3861 4773 1.834263 ACTAGCGGAAGAGAAAGGCAT 59.166 47.619 0.00 0.00 0.00 4.40
3893 4806 3.352338 GAGGGTGTACTGTCGGGCG 62.352 68.421 0.00 0.00 0.00 6.13
3897 4810 1.505353 GTCGGAGGGTGTACTGTCG 59.495 63.158 0.00 0.00 0.00 4.35
3923 4845 2.362120 AGCTGCTGGGTTCATGGC 60.362 61.111 0.00 0.00 0.00 4.40
3937 4859 2.753029 GGTCACAGGGAAGCAGCT 59.247 61.111 0.00 0.00 0.00 4.24
3939 4861 2.046892 CGGGTCACAGGGAAGCAG 60.047 66.667 0.00 0.00 0.00 4.24
3963 4885 0.036732 ACAGGTGCATCGTGGTCATT 59.963 50.000 11.70 0.00 36.39 2.57
3973 4895 2.019249 CATTCCATCGAACAGGTGCAT 58.981 47.619 0.00 0.00 0.00 3.96
4040 4973 7.464444 CGTTTGTTTACTCTTAAGTTGGACGAA 60.464 37.037 1.63 0.95 36.92 3.85
4042 4975 6.124759 CGTTTGTTTACTCTTAAGTTGGACG 58.875 40.000 1.63 0.00 36.92 4.79
4080 5017 3.766691 TAAGCGCTGACGGGGGAC 61.767 66.667 12.58 0.00 40.57 4.46
4081 5018 3.766691 GTAAGCGCTGACGGGGGA 61.767 66.667 12.58 0.00 40.57 4.81
4082 5019 4.077184 TGTAAGCGCTGACGGGGG 62.077 66.667 20.03 0.00 40.57 5.40
4083 5020 2.509336 CTGTAAGCGCTGACGGGG 60.509 66.667 24.23 11.26 40.57 5.73
4086 5023 2.094659 CCACCTGTAAGCGCTGACG 61.095 63.158 20.03 13.97 44.07 4.35
4087 5024 1.014564 GTCCACCTGTAAGCGCTGAC 61.015 60.000 18.67 18.67 0.00 3.51
4088 5025 1.292223 GTCCACCTGTAAGCGCTGA 59.708 57.895 12.58 0.00 0.00 4.26
4089 5026 1.741770 GGTCCACCTGTAAGCGCTG 60.742 63.158 12.58 0.00 0.00 5.18
4090 5027 2.663196 GGTCCACCTGTAAGCGCT 59.337 61.111 2.64 2.64 0.00 5.92
4091 5028 2.436115 GGGTCCACCTGTAAGCGC 60.436 66.667 0.00 0.00 35.85 5.92
4092 5029 2.125673 CGGGTCCACCTGTAAGCG 60.126 66.667 0.00 0.00 37.62 4.68
4181 5119 2.092323 GTGTGCCTCCAAAATCTACCC 58.908 52.381 0.00 0.00 0.00 3.69
4198 5136 7.701328 GGAATTGCCACCACATTTCTTGTGT 62.701 44.000 5.14 0.00 44.60 3.72
4200 5138 3.244181 GGAATTGCCACCACATTTCTTGT 60.244 43.478 0.00 0.00 36.18 3.16
4315 5261 8.341173 TCGCATTTTTCTTGCATATTTTTGTTT 58.659 25.926 0.00 0.00 40.14 2.83
4317 5263 7.290118 GTCGCATTTTTCTTGCATATTTTTGT 58.710 30.769 0.00 0.00 40.14 2.83
4318 5264 6.737750 GGTCGCATTTTTCTTGCATATTTTTG 59.262 34.615 0.00 0.00 40.14 2.44
4321 5267 4.562394 CGGTCGCATTTTTCTTGCATATTT 59.438 37.500 0.00 0.00 40.14 1.40
4339 5285 6.032094 TGCTAAAACTAGAACTAATCGGTCG 58.968 40.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.