Multiple sequence alignment - TraesCS5D01G340800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G340800 chr5D 100.000 3892 0 0 1 3892 429152357 429148466 0.000000e+00 7188
1 TraesCS5D01G340800 chr5D 79.064 1261 183 39 1545 2762 440064546 440063324 0.000000e+00 791
2 TraesCS5D01G340800 chr5D 79.035 1264 182 40 1545 2762 439737210 439735984 0.000000e+00 789
3 TraesCS5D01G340800 chr5D 84.038 639 83 10 1544 2174 429059889 429059262 7.200000e-167 597
4 TraesCS5D01G340800 chr5D 84.223 431 58 9 118 542 428662601 428663027 1.010000e-110 411
5 TraesCS5D01G340800 chr5D 77.316 626 85 25 2174 2769 429059218 429058620 2.260000e-82 316
6 TraesCS5D01G340800 chr5B 92.256 2996 152 25 118 3086 518321115 518318173 0.000000e+00 4174
7 TraesCS5D01G340800 chr5B 89.919 248 10 5 3217 3463 518317983 518317750 4.890000e-79 305
8 TraesCS5D01G340800 chr5B 76.682 446 66 26 493 922 232855527 232855950 3.050000e-51 213
9 TraesCS5D01G340800 chr5A 92.861 1933 73 22 1161 3086 545049232 545047358 0.000000e+00 2745
10 TraesCS5D01G340800 chr5A 80.353 1247 187 38 1547 2769 544794157 544792945 0.000000e+00 893
11 TraesCS5D01G340800 chr5A 83.266 992 138 14 1547 2529 544728228 544727256 0.000000e+00 887
12 TraesCS5D01G340800 chr5A 83.266 992 138 14 1547 2529 544749819 544748847 0.000000e+00 887
13 TraesCS5D01G340800 chr5A 83.266 992 138 14 1547 2529 544771847 544770875 0.000000e+00 887
14 TraesCS5D01G340800 chr5A 85.630 682 72 15 482 1145 545050121 545049448 0.000000e+00 693
15 TraesCS5D01G340800 chr5A 80.000 815 105 33 118 916 287147801 287147029 2.040000e-152 549
16 TraesCS5D01G340800 chr5A 83.565 432 56 9 124 551 544439516 544439936 1.310000e-104 390
17 TraesCS5D01G340800 chr5A 86.124 209 6 4 3084 3291 545047331 545047145 1.830000e-48 204
18 TraesCS5D01G340800 chr5A 80.137 146 20 2 2628 2769 544727156 544727016 2.470000e-17 100
19 TraesCS5D01G340800 chr5A 80.137 146 20 2 2628 2769 544748747 544748607 2.470000e-17 100
20 TraesCS5D01G340800 chr5A 80.137 146 20 2 2628 2769 544770775 544770635 2.470000e-17 100
21 TraesCS5D01G340800 chr2A 78.745 701 125 23 132 823 621521977 621521292 7.670000e-122 448
22 TraesCS5D01G340800 chr2A 93.571 140 8 1 1 140 465586051 465585913 1.420000e-49 207
23 TraesCS5D01G340800 chr6B 77.388 827 114 44 118 922 604477576 604476801 1.290000e-114 424
24 TraesCS5D01G340800 chr4B 78.815 675 102 27 118 770 131437603 131438258 2.160000e-112 416
25 TraesCS5D01G340800 chr4B 75.661 756 128 39 124 854 375010408 375009684 3.750000e-85 326
26 TraesCS5D01G340800 chr3D 77.328 741 112 37 1545 2254 129006868 129007583 1.700000e-103 387
27 TraesCS5D01G340800 chr4D 81.301 492 54 7 353 833 380781847 380781383 7.950000e-97 364
28 TraesCS5D01G340800 chr4D 99.167 120 1 0 1 120 434671147 434671028 2.350000e-52 217
29 TraesCS5D01G340800 chr7D 80.684 497 69 18 118 599 240813612 240814096 1.030000e-95 361
30 TraesCS5D01G340800 chr3A 82.278 395 57 11 152 542 121337702 121338087 2.900000e-86 329
31 TraesCS5D01G340800 chr1D 81.795 390 56 12 118 503 413574322 413573944 2.920000e-81 313
32 TraesCS5D01G340800 chr1D 99.160 119 1 0 1 119 105555659 105555541 8.470000e-52 215
33 TraesCS5D01G340800 chr1D 99.160 119 1 0 1 119 312641861 312641743 8.470000e-52 215
34 TraesCS5D01G340800 chr1D 99.160 119 1 0 1 119 439077168 439077050 8.470000e-52 215
35 TraesCS5D01G340800 chr2D 85.113 309 30 14 124 427 122390997 122391294 6.320000e-78 302
36 TraesCS5D01G340800 chr2D 96.825 126 2 1 1 126 138582674 138582551 3.940000e-50 209
37 TraesCS5D01G340800 chr2D 77.019 322 54 17 608 922 367713333 367713641 2.410000e-37 167
38 TraesCS5D01G340800 chrUn 81.728 301 49 6 2228 2525 447561118 447560821 3.000000e-61 246
39 TraesCS5D01G340800 chrUn 99.160 119 1 0 1 119 97228362 97228244 8.470000e-52 215
40 TraesCS5D01G340800 chrUn 80.412 291 36 11 631 919 93875456 93875185 6.590000e-48 202
41 TraesCS5D01G340800 chr3B 84.120 233 29 7 1139 1367 193607519 193607291 6.550000e-53 219
42 TraesCS5D01G340800 chr6D 99.167 120 1 0 1 120 126809042 126809161 2.350000e-52 217
43 TraesCS5D01G340800 chr6D 99.160 119 1 0 1 119 75580982 75580864 8.470000e-52 215
44 TraesCS5D01G340800 chr7A 83.913 230 31 6 1139 1365 138511865 138511639 8.470000e-52 215
45 TraesCS5D01G340800 chr2B 76.642 411 65 16 433 828 418406364 418406758 8.530000e-47 198


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G340800 chr5D 429148466 429152357 3891 True 7188.0 7188 100.0000 1 3892 1 chr5D.!!$R1 3891
1 TraesCS5D01G340800 chr5D 440063324 440064546 1222 True 791.0 791 79.0640 1545 2762 1 chr5D.!!$R3 1217
2 TraesCS5D01G340800 chr5D 439735984 439737210 1226 True 789.0 789 79.0350 1545 2762 1 chr5D.!!$R2 1217
3 TraesCS5D01G340800 chr5D 429058620 429059889 1269 True 456.5 597 80.6770 1544 2769 2 chr5D.!!$R4 1225
4 TraesCS5D01G340800 chr5B 518317750 518321115 3365 True 2239.5 4174 91.0875 118 3463 2 chr5B.!!$R1 3345
5 TraesCS5D01G340800 chr5A 545047145 545050121 2976 True 1214.0 2745 88.2050 482 3291 3 chr5A.!!$R6 2809
6 TraesCS5D01G340800 chr5A 544792945 544794157 1212 True 893.0 893 80.3530 1547 2769 1 chr5A.!!$R2 1222
7 TraesCS5D01G340800 chr5A 287147029 287147801 772 True 549.0 549 80.0000 118 916 1 chr5A.!!$R1 798
8 TraesCS5D01G340800 chr5A 544727016 544728228 1212 True 493.5 887 81.7015 1547 2769 2 chr5A.!!$R3 1222
9 TraesCS5D01G340800 chr5A 544748607 544749819 1212 True 493.5 887 81.7015 1547 2769 2 chr5A.!!$R4 1222
10 TraesCS5D01G340800 chr5A 544770635 544771847 1212 True 493.5 887 81.7015 1547 2769 2 chr5A.!!$R5 1222
11 TraesCS5D01G340800 chr2A 621521292 621521977 685 True 448.0 448 78.7450 132 823 1 chr2A.!!$R2 691
12 TraesCS5D01G340800 chr6B 604476801 604477576 775 True 424.0 424 77.3880 118 922 1 chr6B.!!$R1 804
13 TraesCS5D01G340800 chr4B 131437603 131438258 655 False 416.0 416 78.8150 118 770 1 chr4B.!!$F1 652
14 TraesCS5D01G340800 chr4B 375009684 375010408 724 True 326.0 326 75.6610 124 854 1 chr4B.!!$R1 730
15 TraesCS5D01G340800 chr3D 129006868 129007583 715 False 387.0 387 77.3280 1545 2254 1 chr3D.!!$F1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.031178 ACGAAGGTACGTGGACACAC 59.969 55.0 0.00 0.0 44.84 3.82 F
114 115 0.034574 ATTGCATGCTACGTTCCCCA 60.035 50.0 20.33 0.0 0.00 4.96 F
1049 1140 0.036388 GTTCATCCTCCTGCCGTCAA 60.036 55.0 0.00 0.0 0.00 3.18 F
1134 1226 0.104855 GGCTGACATATGCACGGAGA 59.895 55.0 1.58 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2311 0.178909 AGGGGATCGCAGATGAGGAT 60.179 55.0 12.32 0.0 45.12 3.24 R
2125 2461 1.663695 CACGTCACCCTGAAGTTTGT 58.336 50.0 0.00 0.0 36.99 2.83 R
2557 2964 0.318441 ACAGACACACATGGTCCTCG 59.682 55.0 0.00 0.0 35.89 4.63 R
3015 3467 2.222678 GCATACATTCTGCGACCATCTG 59.777 50.0 0.00 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.183478 TCTACGAAGGTACGTGGACA 57.817 50.000 0.00 0.00 45.53 4.02
27 28 1.806542 TCTACGAAGGTACGTGGACAC 59.193 52.381 0.00 0.00 45.53 3.67
28 29 1.536766 CTACGAAGGTACGTGGACACA 59.463 52.381 0.00 0.00 44.98 3.72
29 30 0.031178 ACGAAGGTACGTGGACACAC 59.969 55.000 0.00 0.00 44.84 3.82
30 31 0.313043 CGAAGGTACGTGGACACACT 59.687 55.000 0.00 0.00 45.50 3.55
31 32 1.665161 CGAAGGTACGTGGACACACTC 60.665 57.143 0.00 0.00 45.50 3.51
32 33 1.612463 GAAGGTACGTGGACACACTCT 59.388 52.381 0.00 0.00 45.50 3.24
33 34 1.245732 AGGTACGTGGACACACTCTC 58.754 55.000 0.00 0.00 45.50 3.20
34 35 0.243095 GGTACGTGGACACACTCTCC 59.757 60.000 0.00 0.00 45.50 3.71
35 36 0.243095 GTACGTGGACACACTCTCCC 59.757 60.000 0.00 0.00 45.50 4.30
36 37 0.896940 TACGTGGACACACTCTCCCC 60.897 60.000 0.00 0.00 45.50 4.81
37 38 2.943978 CGTGGACACACTCTCCCCC 61.944 68.421 3.12 0.00 45.50 5.40
38 39 1.536662 GTGGACACACTCTCCCCCT 60.537 63.158 0.00 0.00 44.29 4.79
39 40 1.229209 TGGACACACTCTCCCCCTC 60.229 63.158 0.00 0.00 0.00 4.30
40 41 1.079438 GGACACACTCTCCCCCTCT 59.921 63.158 0.00 0.00 0.00 3.69
41 42 0.973496 GGACACACTCTCCCCCTCTC 60.973 65.000 0.00 0.00 0.00 3.20
42 43 1.304547 ACACACTCTCCCCCTCTCG 60.305 63.158 0.00 0.00 0.00 4.04
43 44 1.304547 CACACTCTCCCCCTCTCGT 60.305 63.158 0.00 0.00 0.00 4.18
44 45 0.900647 CACACTCTCCCCCTCTCGTT 60.901 60.000 0.00 0.00 0.00 3.85
45 46 0.900647 ACACTCTCCCCCTCTCGTTG 60.901 60.000 0.00 0.00 0.00 4.10
46 47 1.985116 ACTCTCCCCCTCTCGTTGC 60.985 63.158 0.00 0.00 0.00 4.17
47 48 1.684049 CTCTCCCCCTCTCGTTGCT 60.684 63.158 0.00 0.00 0.00 3.91
48 49 0.395862 CTCTCCCCCTCTCGTTGCTA 60.396 60.000 0.00 0.00 0.00 3.49
49 50 0.261991 TCTCCCCCTCTCGTTGCTAT 59.738 55.000 0.00 0.00 0.00 2.97
50 51 0.390860 CTCCCCCTCTCGTTGCTATG 59.609 60.000 0.00 0.00 0.00 2.23
51 52 1.227674 CCCCCTCTCGTTGCTATGC 60.228 63.158 0.00 0.00 0.00 3.14
52 53 1.522092 CCCCTCTCGTTGCTATGCA 59.478 57.895 0.00 0.00 36.47 3.96
53 54 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
54 55 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
55 56 1.069823 CCCTCTCGTTGCTATGCATCT 59.930 52.381 0.19 0.00 38.76 2.90
56 57 2.402305 CCTCTCGTTGCTATGCATCTC 58.598 52.381 0.19 0.00 38.76 2.75
57 58 2.402305 CTCTCGTTGCTATGCATCTCC 58.598 52.381 0.19 0.00 38.76 3.71
58 59 2.034878 TCTCGTTGCTATGCATCTCCT 58.965 47.619 0.19 0.00 38.76 3.69
59 60 3.222603 TCTCGTTGCTATGCATCTCCTA 58.777 45.455 0.19 0.00 38.76 2.94
60 61 3.254411 TCTCGTTGCTATGCATCTCCTAG 59.746 47.826 0.19 0.00 38.76 3.02
61 62 3.222603 TCGTTGCTATGCATCTCCTAGA 58.777 45.455 0.19 0.00 38.76 2.43
62 63 3.829026 TCGTTGCTATGCATCTCCTAGAT 59.171 43.478 0.19 0.00 38.76 1.98
63 64 5.010282 TCGTTGCTATGCATCTCCTAGATA 58.990 41.667 0.19 0.00 38.76 1.98
64 65 5.124617 TCGTTGCTATGCATCTCCTAGATAG 59.875 44.000 0.19 0.00 38.76 2.08
65 66 5.124617 CGTTGCTATGCATCTCCTAGATAGA 59.875 44.000 0.19 0.00 38.76 1.98
66 67 6.183360 CGTTGCTATGCATCTCCTAGATAGAT 60.183 42.308 0.19 0.00 38.76 1.98
67 68 6.957920 TGCTATGCATCTCCTAGATAGATC 57.042 41.667 0.19 0.00 32.12 2.75
68 69 6.671605 TGCTATGCATCTCCTAGATAGATCT 58.328 40.000 0.19 0.00 32.12 2.75
69 70 7.124721 TGCTATGCATCTCCTAGATAGATCTT 58.875 38.462 0.19 0.00 32.12 2.40
70 71 7.068470 TGCTATGCATCTCCTAGATAGATCTTG 59.932 40.741 0.19 0.00 32.12 3.02
71 72 5.657826 TGCATCTCCTAGATAGATCTTGC 57.342 43.478 0.00 0.69 38.32 4.01
72 73 4.157472 TGCATCTCCTAGATAGATCTTGCG 59.843 45.833 0.00 0.00 36.48 4.85
73 74 4.157656 GCATCTCCTAGATAGATCTTGCGT 59.842 45.833 0.00 0.00 38.32 5.24
74 75 5.639757 CATCTCCTAGATAGATCTTGCGTG 58.360 45.833 0.00 0.00 38.32 5.34
75 76 4.974399 TCTCCTAGATAGATCTTGCGTGA 58.026 43.478 0.00 0.00 38.32 4.35
76 77 5.565509 TCTCCTAGATAGATCTTGCGTGAT 58.434 41.667 0.00 0.00 38.32 3.06
77 78 5.645929 TCTCCTAGATAGATCTTGCGTGATC 59.354 44.000 0.00 9.82 42.18 2.92
78 79 4.393371 TCCTAGATAGATCTTGCGTGATCG 59.607 45.833 0.00 0.00 45.35 3.69
79 80 4.155099 CCTAGATAGATCTTGCGTGATCGT 59.845 45.833 0.00 6.35 45.35 3.73
80 81 5.351740 CCTAGATAGATCTTGCGTGATCGTA 59.648 44.000 0.00 6.70 45.35 3.43
81 82 5.289917 AGATAGATCTTGCGTGATCGTAG 57.710 43.478 0.00 0.00 45.35 3.51
82 83 2.783828 AGATCTTGCGTGATCGTAGG 57.216 50.000 11.44 0.00 45.35 3.18
83 84 2.298610 AGATCTTGCGTGATCGTAGGA 58.701 47.619 11.44 0.00 45.35 2.94
84 85 2.688446 AGATCTTGCGTGATCGTAGGAA 59.312 45.455 11.44 0.00 45.35 3.36
85 86 3.319405 AGATCTTGCGTGATCGTAGGAAT 59.681 43.478 11.44 0.00 45.35 3.01
86 87 3.520290 TCTTGCGTGATCGTAGGAATT 57.480 42.857 0.00 0.00 35.34 2.17
87 88 3.857052 TCTTGCGTGATCGTAGGAATTT 58.143 40.909 0.00 0.00 35.34 1.82
88 89 4.250464 TCTTGCGTGATCGTAGGAATTTT 58.750 39.130 0.00 0.00 35.34 1.82
89 90 4.693566 TCTTGCGTGATCGTAGGAATTTTT 59.306 37.500 0.00 0.00 35.34 1.94
110 111 5.820926 TTTTGAAATTGCATGCTACGTTC 57.179 34.783 20.33 17.52 0.00 3.95
111 112 3.485947 TGAAATTGCATGCTACGTTCC 57.514 42.857 20.33 2.94 0.00 3.62
112 113 2.163412 TGAAATTGCATGCTACGTTCCC 59.837 45.455 20.33 1.47 0.00 3.97
113 114 1.102978 AATTGCATGCTACGTTCCCC 58.897 50.000 20.33 0.00 0.00 4.81
114 115 0.034574 ATTGCATGCTACGTTCCCCA 60.035 50.000 20.33 0.00 0.00 4.96
115 116 0.250945 TTGCATGCTACGTTCCCCAA 60.251 50.000 20.33 0.00 0.00 4.12
116 117 0.958382 TGCATGCTACGTTCCCCAAC 60.958 55.000 20.33 0.00 0.00 3.77
257 260 6.872920 ACAAACACACCACAAGAATTACATT 58.127 32.000 0.00 0.00 0.00 2.71
295 298 8.369424 CAGAAGAGGACATGATATTGAAGATCT 58.631 37.037 0.00 0.00 0.00 2.75
298 301 7.898918 AGAGGACATGATATTGAAGATCTGAG 58.101 38.462 0.00 0.00 0.00 3.35
300 303 7.898918 AGGACATGATATTGAAGATCTGAGAG 58.101 38.462 0.00 0.00 0.00 3.20
303 306 8.709272 ACATGATATTGAAGATCTGAGAGAGA 57.291 34.615 0.00 0.00 34.25 3.10
304 307 8.799367 ACATGATATTGAAGATCTGAGAGAGAG 58.201 37.037 0.00 0.00 32.80 3.20
305 308 9.016438 CATGATATTGAAGATCTGAGAGAGAGA 57.984 37.037 0.00 0.00 32.80 3.10
306 309 8.625786 TGATATTGAAGATCTGAGAGAGAGAG 57.374 38.462 0.00 0.00 32.80 3.20
307 310 8.439172 TGATATTGAAGATCTGAGAGAGAGAGA 58.561 37.037 0.00 0.00 32.80 3.10
308 311 8.859236 ATATTGAAGATCTGAGAGAGAGAGAG 57.141 38.462 0.00 0.00 32.80 3.20
309 312 5.955961 TGAAGATCTGAGAGAGAGAGAGA 57.044 43.478 0.00 0.00 32.80 3.10
310 313 5.922053 TGAAGATCTGAGAGAGAGAGAGAG 58.078 45.833 0.00 0.00 32.80 3.20
311 314 5.662657 TGAAGATCTGAGAGAGAGAGAGAGA 59.337 44.000 0.00 0.00 32.80 3.10
312 315 5.804944 AGATCTGAGAGAGAGAGAGAGAG 57.195 47.826 0.00 0.00 32.80 3.20
313 316 5.462240 AGATCTGAGAGAGAGAGAGAGAGA 58.538 45.833 0.00 0.00 32.80 3.10
314 317 5.539574 AGATCTGAGAGAGAGAGAGAGAGAG 59.460 48.000 0.00 0.00 32.80 3.20
315 318 4.871822 TCTGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
316 319 4.892345 TCTGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
317 320 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
318 321 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
319 322 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
320 323 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
452 510 0.406361 ATGGTTTTCCCCTACGGCAA 59.594 50.000 0.00 0.00 39.73 4.52
477 535 0.947244 CGGAACAAGGCTCCATATGC 59.053 55.000 0.00 0.00 32.77 3.14
480 538 2.288666 GAACAAGGCTCCATATGCGAA 58.711 47.619 0.00 0.00 0.00 4.70
506 564 0.881118 GGAACAAAGGCTTGCATCGA 59.119 50.000 0.00 0.00 35.84 3.59
586 666 2.983879 AAATGGAGGCTCACGGGGG 61.984 63.158 17.69 0.00 0.00 5.40
679 763 1.139947 CGACTCCCGAAGCTTCCTC 59.860 63.158 20.62 6.75 41.76 3.71
724 809 2.402305 TGTCAAAAATTGGCATCGTGC 58.598 42.857 0.00 1.92 40.96 5.34
867 955 9.801873 ATGATAACAAAAGTATGTGGCAATAAC 57.198 29.630 0.00 0.00 32.81 1.89
921 1011 9.892130 ATAGATATATCAGAGACGTATCACACA 57.108 33.333 13.45 0.00 0.00 3.72
922 1012 8.035165 AGATATATCAGAGACGTATCACACAC 57.965 38.462 13.45 0.00 0.00 3.82
970 1061 1.663702 CCGGTCTTCGCGTCTGTTT 60.664 57.895 5.77 0.00 37.59 2.83
975 1066 3.001365 CGGTCTTCGCGTCTGTTTAATAC 60.001 47.826 5.77 0.00 0.00 1.89
1049 1140 0.036388 GTTCATCCTCCTGCCGTCAA 60.036 55.000 0.00 0.00 0.00 3.18
1061 1152 0.179200 GCCGTCAATAAACAGGCACG 60.179 55.000 0.00 0.00 46.48 5.34
1064 1155 0.878416 GTCAATAAACAGGCACGCCA 59.122 50.000 11.35 0.00 38.92 5.69
1089 1180 4.962836 ACCCACTCCGACGTCCGT 62.963 66.667 10.58 1.79 36.31 4.69
1118 1210 1.677966 CATGCTGCTTGGTCTGGCT 60.678 57.895 7.58 0.00 0.00 4.75
1134 1226 0.104855 GGCTGACATATGCACGGAGA 59.895 55.000 1.58 0.00 0.00 3.71
1137 1229 2.481969 GCTGACATATGCACGGAGAAGA 60.482 50.000 1.58 0.00 0.00 2.87
1158 1250 7.826744 AGAAGAAGGTCCATGAAATTAGAAGAC 59.173 37.037 0.00 0.00 0.00 3.01
1248 1540 1.412710 GTCAACACAGGTCAGAGGTCA 59.587 52.381 0.00 0.00 0.00 4.02
1268 1560 3.118408 TCAATAGGACCTCCAATGAACCG 60.118 47.826 0.00 0.00 38.89 4.44
1355 1647 5.118971 CGTAAAATAATTAGGACCGCGCATA 59.881 40.000 8.75 0.00 0.00 3.14
1474 1768 0.677288 AACGTGTTCGGAGTGATCCA 59.323 50.000 0.00 0.00 41.85 3.41
1476 1770 1.275291 ACGTGTTCGGAGTGATCCATT 59.725 47.619 0.00 0.00 41.85 3.16
1600 1894 2.057922 GGGAGGGAGATATTGAAGCCA 58.942 52.381 0.00 0.00 0.00 4.75
1858 2158 2.440430 CCTCCTCTTCCTCGCCGA 60.440 66.667 0.00 0.00 0.00 5.54
2024 2342 2.049627 GATCCCCTGAGGCGATGCTT 62.050 60.000 2.84 0.00 34.51 3.91
2412 2805 4.373116 GTGCTCCGGGACAAGCGA 62.373 66.667 0.00 0.00 39.30 4.93
2472 2867 1.344226 CGATCGAAGCTTGCGTGACA 61.344 55.000 10.26 0.00 0.00 3.58
2557 2964 2.731976 GCCGTTTATCGTGATGATCCTC 59.268 50.000 0.00 0.00 38.57 3.71
2887 3335 3.751175 TCTGTTGAAATTCCTAAGGCACG 59.249 43.478 0.00 0.00 0.00 5.34
2893 3341 4.764823 TGAAATTCCTAAGGCACGTTGAAT 59.235 37.500 0.00 0.00 0.00 2.57
2979 3427 2.289756 TGTGCTTAATTGGCCGTCTGTA 60.290 45.455 0.00 0.00 0.00 2.74
3010 3462 0.941963 ATAGGCAGGGTGTCCTAGGA 59.058 55.000 7.62 7.62 42.67 2.94
3011 3463 0.714180 TAGGCAGGGTGTCCTAGGAA 59.286 55.000 14.65 0.93 42.67 3.36
3015 3467 2.158798 GGCAGGGTGTCCTAGGAATTAC 60.159 54.545 14.65 12.80 42.67 1.89
3136 3617 6.352516 AGTTAGACCTGATCCATCACATTTC 58.647 40.000 0.00 0.00 32.50 2.17
3146 3627 8.817092 TGATCCATCACATTTCATGCATATAT 57.183 30.769 0.00 0.00 0.00 0.86
3293 3805 4.835615 ACCTGACTCTCAGTAGTGACATTT 59.164 41.667 0.00 0.00 42.80 2.32
3294 3806 6.010850 ACCTGACTCTCAGTAGTGACATTTA 58.989 40.000 0.00 0.00 42.80 1.40
3295 3807 6.071840 ACCTGACTCTCAGTAGTGACATTTAC 60.072 42.308 0.00 0.00 42.80 2.01
3296 3808 6.151985 CCTGACTCTCAGTAGTGACATTTACT 59.848 42.308 0.00 0.00 42.80 2.24
3297 3809 7.337184 CCTGACTCTCAGTAGTGACATTTACTA 59.663 40.741 0.00 0.00 42.80 1.82
3298 3810 8.270080 TGACTCTCAGTAGTGACATTTACTAG 57.730 38.462 0.00 0.00 31.72 2.57
3328 3840 8.739461 GTTTTAACAGTTTTCGATGTAGGTTTG 58.261 33.333 0.00 0.00 0.00 2.93
3345 3857 3.435026 GGTTTGGGGCAGAGCATTAGATA 60.435 47.826 0.00 0.00 0.00 1.98
3347 3859 5.514834 GGTTTGGGGCAGAGCATTAGATATA 60.515 44.000 0.00 0.00 0.00 0.86
3361 3873 6.423905 GCATTAGATATAGGCGAACAGTTTGA 59.576 38.462 4.52 0.00 0.00 2.69
3362 3874 7.118390 GCATTAGATATAGGCGAACAGTTTGAT 59.882 37.037 4.52 0.00 0.00 2.57
3363 3875 7.946655 TTAGATATAGGCGAACAGTTTGATG 57.053 36.000 4.52 0.00 0.00 3.07
3364 3876 5.918608 AGATATAGGCGAACAGTTTGATGT 58.081 37.500 4.52 0.00 33.96 3.06
3365 3877 5.755375 AGATATAGGCGAACAGTTTGATGTG 59.245 40.000 4.52 0.00 32.52 3.21
3366 3878 2.254546 AGGCGAACAGTTTGATGTGA 57.745 45.000 4.52 0.00 32.52 3.58
3367 3879 2.571212 AGGCGAACAGTTTGATGTGAA 58.429 42.857 4.52 0.00 32.52 3.18
3368 3880 2.948979 AGGCGAACAGTTTGATGTGAAA 59.051 40.909 4.52 0.00 32.52 2.69
3369 3881 3.042887 GGCGAACAGTTTGATGTGAAAC 58.957 45.455 4.52 0.00 36.28 2.78
3370 3882 3.042887 GCGAACAGTTTGATGTGAAACC 58.957 45.455 4.52 0.00 36.63 3.27
3371 3883 3.288242 CGAACAGTTTGATGTGAAACCG 58.712 45.455 0.00 0.00 36.63 4.44
3397 3909 1.878088 GTGATGATATGTGGCAGCAGG 59.122 52.381 0.00 0.00 30.28 4.85
3417 3929 1.543802 GTCCAGTCTCCACTCTCTGTG 59.456 57.143 0.00 0.00 45.80 3.66
3429 3941 2.020720 CTCTCTGTGTAGCGAGGTCAT 58.979 52.381 0.00 0.00 33.19 3.06
3430 3942 2.425312 CTCTCTGTGTAGCGAGGTCATT 59.575 50.000 0.00 0.00 33.19 2.57
3437 3949 0.107703 TAGCGAGGTCATTTGGCCAG 60.108 55.000 5.11 0.00 43.78 4.85
3463 3975 4.080356 CCCAGAGGAGAATGGTAAATGTCA 60.080 45.833 0.00 0.00 34.58 3.58
3464 3976 5.500234 CCAGAGGAGAATGGTAAATGTCAA 58.500 41.667 0.00 0.00 0.00 3.18
3465 3977 6.125029 CCAGAGGAGAATGGTAAATGTCAAT 58.875 40.000 0.00 0.00 0.00 2.57
3466 3978 6.039047 CCAGAGGAGAATGGTAAATGTCAATG 59.961 42.308 0.00 0.00 0.00 2.82
3467 3979 6.039047 CAGAGGAGAATGGTAAATGTCAATGG 59.961 42.308 0.00 0.00 0.00 3.16
3468 3980 5.831103 AGGAGAATGGTAAATGTCAATGGT 58.169 37.500 0.00 0.00 0.00 3.55
3469 3981 5.653769 AGGAGAATGGTAAATGTCAATGGTG 59.346 40.000 0.00 0.00 0.00 4.17
3470 3982 5.163519 GGAGAATGGTAAATGTCAATGGTGG 60.164 44.000 0.00 0.00 0.00 4.61
3471 3983 4.160252 AGAATGGTAAATGTCAATGGTGGC 59.840 41.667 0.00 0.00 0.00 5.01
3472 3984 3.168035 TGGTAAATGTCAATGGTGGCT 57.832 42.857 0.00 0.00 0.00 4.75
3473 3985 4.308526 TGGTAAATGTCAATGGTGGCTA 57.691 40.909 0.00 0.00 0.00 3.93
3474 3986 4.269183 TGGTAAATGTCAATGGTGGCTAG 58.731 43.478 0.00 0.00 0.00 3.42
3475 3987 3.632145 GGTAAATGTCAATGGTGGCTAGG 59.368 47.826 0.00 0.00 0.00 3.02
3476 3988 1.767759 AATGTCAATGGTGGCTAGGC 58.232 50.000 9.85 9.85 0.00 3.93
3477 3989 0.625316 ATGTCAATGGTGGCTAGGCA 59.375 50.000 16.16 16.16 0.00 4.75
3478 3990 0.403655 TGTCAATGGTGGCTAGGCAA 59.596 50.000 22.04 6.88 0.00 4.52
3479 3991 1.098050 GTCAATGGTGGCTAGGCAAG 58.902 55.000 22.04 8.85 0.00 4.01
3480 3992 0.698238 TCAATGGTGGCTAGGCAAGT 59.302 50.000 22.04 2.38 0.00 3.16
3481 3993 1.098050 CAATGGTGGCTAGGCAAGTC 58.902 55.000 22.04 13.73 0.00 3.01
3482 3994 0.995024 AATGGTGGCTAGGCAAGTCT 59.005 50.000 22.04 3.44 0.00 3.24
3483 3995 0.995024 ATGGTGGCTAGGCAAGTCTT 59.005 50.000 22.04 8.99 0.00 3.01
3484 3996 0.036732 TGGTGGCTAGGCAAGTCTTG 59.963 55.000 22.04 8.31 0.00 3.02
3485 3997 0.036875 GGTGGCTAGGCAAGTCTTGT 59.963 55.000 22.04 0.00 0.00 3.16
3486 3998 1.160137 GTGGCTAGGCAAGTCTTGTG 58.840 55.000 22.04 4.08 0.00 3.33
3487 3999 0.764890 TGGCTAGGCAAGTCTTGTGT 59.235 50.000 17.92 4.52 0.00 3.72
3488 4000 1.160137 GGCTAGGCAAGTCTTGTGTG 58.840 55.000 12.16 4.08 0.00 3.82
3489 4001 1.543429 GGCTAGGCAAGTCTTGTGTGT 60.543 52.381 12.16 0.00 0.00 3.72
3490 4002 1.532868 GCTAGGCAAGTCTTGTGTGTG 59.467 52.381 14.03 3.15 0.00 3.82
3491 4003 1.532868 CTAGGCAAGTCTTGTGTGTGC 59.467 52.381 14.03 0.00 34.42 4.57
3492 4004 1.009675 GGCAAGTCTTGTGTGTGCG 60.010 57.895 14.03 0.00 36.04 5.34
3493 4005 1.436195 GGCAAGTCTTGTGTGTGCGA 61.436 55.000 14.03 0.00 36.04 5.10
3494 4006 0.041839 GCAAGTCTTGTGTGTGCGAG 60.042 55.000 14.03 0.00 0.00 5.03
3495 4007 1.290203 CAAGTCTTGTGTGTGCGAGT 58.710 50.000 4.27 0.00 0.00 4.18
3496 4008 1.665679 CAAGTCTTGTGTGTGCGAGTT 59.334 47.619 4.27 0.00 0.00 3.01
3497 4009 2.024176 AGTCTTGTGTGTGCGAGTTT 57.976 45.000 0.00 0.00 0.00 2.66
3498 4010 2.356135 AGTCTTGTGTGTGCGAGTTTT 58.644 42.857 0.00 0.00 0.00 2.43
3499 4011 2.747446 AGTCTTGTGTGTGCGAGTTTTT 59.253 40.909 0.00 0.00 0.00 1.94
3500 4012 3.098636 GTCTTGTGTGTGCGAGTTTTTC 58.901 45.455 0.00 0.00 0.00 2.29
3501 4013 3.006940 TCTTGTGTGTGCGAGTTTTTCT 58.993 40.909 0.00 0.00 0.00 2.52
3502 4014 2.823196 TGTGTGTGCGAGTTTTTCTG 57.177 45.000 0.00 0.00 0.00 3.02
3503 4015 2.080693 TGTGTGTGCGAGTTTTTCTGT 58.919 42.857 0.00 0.00 0.00 3.41
3504 4016 3.263261 TGTGTGTGCGAGTTTTTCTGTA 58.737 40.909 0.00 0.00 0.00 2.74
3505 4017 3.874543 TGTGTGTGCGAGTTTTTCTGTAT 59.125 39.130 0.00 0.00 0.00 2.29
3506 4018 5.051153 TGTGTGTGCGAGTTTTTCTGTATA 58.949 37.500 0.00 0.00 0.00 1.47
3507 4019 5.699001 TGTGTGTGCGAGTTTTTCTGTATAT 59.301 36.000 0.00 0.00 0.00 0.86
3508 4020 6.203915 TGTGTGTGCGAGTTTTTCTGTATATT 59.796 34.615 0.00 0.00 0.00 1.28
3509 4021 6.519761 GTGTGTGCGAGTTTTTCTGTATATTG 59.480 38.462 0.00 0.00 0.00 1.90
3510 4022 6.425417 TGTGTGCGAGTTTTTCTGTATATTGA 59.575 34.615 0.00 0.00 0.00 2.57
3511 4023 7.119116 TGTGTGCGAGTTTTTCTGTATATTGAT 59.881 33.333 0.00 0.00 0.00 2.57
3512 4024 7.426456 GTGTGCGAGTTTTTCTGTATATTGATG 59.574 37.037 0.00 0.00 0.00 3.07
3513 4025 6.412072 GTGCGAGTTTTTCTGTATATTGATGC 59.588 38.462 0.00 0.00 0.00 3.91
3514 4026 6.093357 TGCGAGTTTTTCTGTATATTGATGCA 59.907 34.615 0.00 0.00 0.00 3.96
3515 4027 7.134815 GCGAGTTTTTCTGTATATTGATGCAT 58.865 34.615 0.00 0.00 0.00 3.96
3516 4028 7.112565 GCGAGTTTTTCTGTATATTGATGCATG 59.887 37.037 2.46 0.00 0.00 4.06
3517 4029 7.588854 CGAGTTTTTCTGTATATTGATGCATGG 59.411 37.037 2.46 0.00 0.00 3.66
3518 4030 8.297470 AGTTTTTCTGTATATTGATGCATGGT 57.703 30.769 2.46 0.00 0.00 3.55
3519 4031 9.407380 AGTTTTTCTGTATATTGATGCATGGTA 57.593 29.630 2.46 0.00 0.00 3.25
3520 4032 9.450807 GTTTTTCTGTATATTGATGCATGGTAC 57.549 33.333 2.46 0.45 0.00 3.34
3521 4033 8.978874 TTTTCTGTATATTGATGCATGGTACT 57.021 30.769 2.46 0.00 0.00 2.73
3522 4034 8.607441 TTTCTGTATATTGATGCATGGTACTC 57.393 34.615 2.46 0.00 0.00 2.59
3523 4035 7.544804 TCTGTATATTGATGCATGGTACTCT 57.455 36.000 2.46 0.00 0.00 3.24
3524 4036 7.381323 TCTGTATATTGATGCATGGTACTCTG 58.619 38.462 2.46 0.00 0.00 3.35
3525 4037 7.233348 TCTGTATATTGATGCATGGTACTCTGA 59.767 37.037 2.46 0.00 0.00 3.27
3526 4038 7.381323 TGTATATTGATGCATGGTACTCTGAG 58.619 38.462 2.46 2.45 0.00 3.35
3527 4039 6.676990 ATATTGATGCATGGTACTCTGAGA 57.323 37.500 12.44 0.00 0.00 3.27
3528 4040 4.397481 TTGATGCATGGTACTCTGAGAG 57.603 45.455 12.44 8.15 35.52 3.20
3529 4041 2.102084 TGATGCATGGTACTCTGAGAGC 59.898 50.000 12.44 5.62 32.04 4.09
3530 4042 1.560505 TGCATGGTACTCTGAGAGCA 58.439 50.000 12.44 10.95 32.04 4.26
3531 4043 1.479730 TGCATGGTACTCTGAGAGCAG 59.520 52.381 12.44 6.56 43.67 4.24
3532 4044 1.805871 GCATGGTACTCTGAGAGCAGC 60.806 57.143 12.44 7.20 42.01 5.25
3533 4045 1.479730 CATGGTACTCTGAGAGCAGCA 59.520 52.381 16.05 16.05 42.01 4.41
3534 4046 1.180907 TGGTACTCTGAGAGCAGCAG 58.819 55.000 10.33 0.00 42.01 4.24
3535 4047 0.179113 GGTACTCTGAGAGCAGCAGC 60.179 60.000 12.44 0.00 42.01 5.25
3536 4048 0.529833 GTACTCTGAGAGCAGCAGCA 59.470 55.000 12.44 0.00 45.49 4.41
3537 4049 0.529833 TACTCTGAGAGCAGCAGCAC 59.470 55.000 12.44 0.00 45.49 4.40
3538 4050 1.292541 CTCTGAGAGCAGCAGCACA 59.707 57.895 3.17 0.00 45.49 4.57
3539 4051 0.738063 CTCTGAGAGCAGCAGCACAG 60.738 60.000 3.17 9.85 45.49 3.66
3540 4052 1.742140 CTGAGAGCAGCAGCACAGG 60.742 63.158 3.17 0.00 45.49 4.00
3541 4053 2.346739 GAGAGCAGCAGCACAGGT 59.653 61.111 3.17 0.00 45.49 4.00
3542 4054 1.302351 GAGAGCAGCAGCACAGGTT 60.302 57.895 3.17 0.00 45.49 3.50
3543 4055 0.036952 GAGAGCAGCAGCACAGGTTA 60.037 55.000 3.17 0.00 45.49 2.85
3544 4056 0.036577 AGAGCAGCAGCACAGGTTAG 60.037 55.000 3.17 0.00 45.49 2.34
3545 4057 0.036952 GAGCAGCAGCACAGGTTAGA 60.037 55.000 3.17 0.00 45.49 2.10
3546 4058 0.617413 AGCAGCAGCACAGGTTAGAT 59.383 50.000 3.17 0.00 45.49 1.98
3547 4059 0.731417 GCAGCAGCACAGGTTAGATG 59.269 55.000 0.00 0.00 41.58 2.90
3548 4060 0.731417 CAGCAGCACAGGTTAGATGC 59.269 55.000 0.00 0.00 39.74 3.91
3552 4064 3.165606 GCACAGGTTAGATGCTGCT 57.834 52.632 0.00 0.00 36.40 4.24
3553 4065 0.731417 GCACAGGTTAGATGCTGCTG 59.269 55.000 0.00 0.00 36.40 4.41
3554 4066 1.676916 GCACAGGTTAGATGCTGCTGA 60.677 52.381 0.00 0.00 36.40 4.26
3555 4067 2.703416 CACAGGTTAGATGCTGCTGAA 58.297 47.619 0.00 0.00 0.00 3.02
3556 4068 3.076621 CACAGGTTAGATGCTGCTGAAA 58.923 45.455 0.00 0.00 0.00 2.69
3557 4069 3.503363 CACAGGTTAGATGCTGCTGAAAA 59.497 43.478 0.00 0.00 0.00 2.29
3558 4070 4.157289 CACAGGTTAGATGCTGCTGAAAAT 59.843 41.667 0.00 0.00 0.00 1.82
3559 4071 4.768968 ACAGGTTAGATGCTGCTGAAAATT 59.231 37.500 0.00 0.00 0.00 1.82
3560 4072 5.244626 ACAGGTTAGATGCTGCTGAAAATTT 59.755 36.000 0.00 0.00 0.00 1.82
3561 4073 6.161381 CAGGTTAGATGCTGCTGAAAATTTT 58.839 36.000 2.28 2.28 0.00 1.82
3562 4074 6.090358 CAGGTTAGATGCTGCTGAAAATTTTG 59.910 38.462 8.47 0.00 0.00 2.44
3563 4075 5.928264 GGTTAGATGCTGCTGAAAATTTTGT 59.072 36.000 8.47 0.00 0.00 2.83
3564 4076 6.128742 GGTTAGATGCTGCTGAAAATTTTGTG 60.129 38.462 8.47 1.94 0.00 3.33
3565 4077 3.744426 AGATGCTGCTGAAAATTTTGTGC 59.256 39.130 8.47 12.19 0.00 4.57
3566 4078 2.902523 TGCTGCTGAAAATTTTGTGCA 58.097 38.095 19.68 19.68 0.00 4.57
3567 4079 3.268330 TGCTGCTGAAAATTTTGTGCAA 58.732 36.364 20.63 10.14 0.00 4.08
3568 4080 3.310227 TGCTGCTGAAAATTTTGTGCAAG 59.690 39.130 20.63 16.67 0.00 4.01
3569 4081 3.556775 GCTGCTGAAAATTTTGTGCAAGA 59.443 39.130 20.63 6.19 0.00 3.02
3570 4082 4.034279 GCTGCTGAAAATTTTGTGCAAGAA 59.966 37.500 20.63 5.94 0.00 2.52
3571 4083 5.277634 GCTGCTGAAAATTTTGTGCAAGAAT 60.278 36.000 20.63 0.00 0.00 2.40
3572 4084 6.073657 GCTGCTGAAAATTTTGTGCAAGAATA 60.074 34.615 20.63 5.18 0.00 1.75
3573 4085 7.360607 GCTGCTGAAAATTTTGTGCAAGAATAT 60.361 33.333 20.63 0.00 0.00 1.28
3574 4086 8.380743 TGCTGAAAATTTTGTGCAAGAATATT 57.619 26.923 19.02 0.00 0.00 1.28
3575 4087 8.283992 TGCTGAAAATTTTGTGCAAGAATATTG 58.716 29.630 19.02 0.00 0.00 1.90
3576 4088 7.747357 GCTGAAAATTTTGTGCAAGAATATTGG 59.253 33.333 8.47 0.00 0.00 3.16
3577 4089 8.097078 TGAAAATTTTGTGCAAGAATATTGGG 57.903 30.769 8.47 0.00 0.00 4.12
3578 4090 7.718753 TGAAAATTTTGTGCAAGAATATTGGGT 59.281 29.630 8.47 0.00 0.00 4.51
3579 4091 7.437793 AAATTTTGTGCAAGAATATTGGGTG 57.562 32.000 0.00 0.00 0.00 4.61
3580 4092 5.543507 TTTTGTGCAAGAATATTGGGTGT 57.456 34.783 0.00 0.00 0.00 4.16
3581 4093 4.517952 TTGTGCAAGAATATTGGGTGTG 57.482 40.909 0.00 0.00 0.00 3.82
3582 4094 2.824936 TGTGCAAGAATATTGGGTGTGG 59.175 45.455 0.00 0.00 0.00 4.17
3583 4095 3.088532 GTGCAAGAATATTGGGTGTGGA 58.911 45.455 0.00 0.00 0.00 4.02
3584 4096 3.701040 GTGCAAGAATATTGGGTGTGGAT 59.299 43.478 0.00 0.00 0.00 3.41
3585 4097 4.160252 GTGCAAGAATATTGGGTGTGGATT 59.840 41.667 0.00 0.00 0.00 3.01
3586 4098 4.160065 TGCAAGAATATTGGGTGTGGATTG 59.840 41.667 0.00 0.00 0.00 2.67
3587 4099 4.685924 CAAGAATATTGGGTGTGGATTGC 58.314 43.478 0.00 0.00 0.00 3.56
3588 4100 3.979911 AGAATATTGGGTGTGGATTGCA 58.020 40.909 0.00 0.00 0.00 4.08
3589 4101 4.549668 AGAATATTGGGTGTGGATTGCAT 58.450 39.130 0.00 0.00 0.00 3.96
3590 4102 5.704354 AGAATATTGGGTGTGGATTGCATA 58.296 37.500 0.00 0.00 0.00 3.14
3591 4103 5.536161 AGAATATTGGGTGTGGATTGCATAC 59.464 40.000 0.00 0.00 0.00 2.39
3592 4104 1.846007 TTGGGTGTGGATTGCATACC 58.154 50.000 14.51 14.51 33.74 2.73
3593 4105 0.998928 TGGGTGTGGATTGCATACCT 59.001 50.000 20.47 0.00 34.73 3.08
3594 4106 1.357420 TGGGTGTGGATTGCATACCTT 59.643 47.619 20.47 0.00 34.73 3.50
3595 4107 2.225242 TGGGTGTGGATTGCATACCTTT 60.225 45.455 20.47 0.00 34.73 3.11
3596 4108 2.166254 GGGTGTGGATTGCATACCTTTG 59.834 50.000 20.47 0.00 34.73 2.77
3597 4109 3.088532 GGTGTGGATTGCATACCTTTGA 58.911 45.455 15.38 0.00 32.09 2.69
3598 4110 3.509575 GGTGTGGATTGCATACCTTTGAA 59.490 43.478 15.38 0.00 32.09 2.69
3599 4111 4.485163 GTGTGGATTGCATACCTTTGAAC 58.515 43.478 10.32 2.07 0.00 3.18
3600 4112 4.218417 GTGTGGATTGCATACCTTTGAACT 59.782 41.667 10.32 0.00 0.00 3.01
3601 4113 5.414454 GTGTGGATTGCATACCTTTGAACTA 59.586 40.000 10.32 0.00 0.00 2.24
3602 4114 6.007076 TGTGGATTGCATACCTTTGAACTAA 58.993 36.000 10.32 0.00 0.00 2.24
3603 4115 6.150976 TGTGGATTGCATACCTTTGAACTAAG 59.849 38.462 10.32 0.00 0.00 2.18
3604 4116 5.125417 TGGATTGCATACCTTTGAACTAAGC 59.875 40.000 10.32 0.00 0.00 3.09
3605 4117 5.358160 GGATTGCATACCTTTGAACTAAGCT 59.642 40.000 0.00 0.00 0.00 3.74
3606 4118 6.127619 GGATTGCATACCTTTGAACTAAGCTT 60.128 38.462 3.48 3.48 0.00 3.74
3607 4119 7.067008 GGATTGCATACCTTTGAACTAAGCTTA 59.933 37.037 5.94 5.94 0.00 3.09
3608 4120 6.985188 TGCATACCTTTGAACTAAGCTTAG 57.015 37.500 28.16 28.16 36.82 2.18
3609 4121 5.354234 TGCATACCTTTGAACTAAGCTTAGC 59.646 40.000 29.39 16.72 34.09 3.09
3610 4122 5.586643 GCATACCTTTGAACTAAGCTTAGCT 59.413 40.000 29.39 20.16 42.56 3.32
3624 4136 5.037383 AGCTTAGCTTTGTCCCCTAATAC 57.963 43.478 0.00 0.00 33.89 1.89
3625 4137 4.473559 AGCTTAGCTTTGTCCCCTAATACA 59.526 41.667 0.00 0.00 33.89 2.29
3626 4138 5.045140 AGCTTAGCTTTGTCCCCTAATACAA 60.045 40.000 0.00 0.00 33.89 2.41
3627 4139 5.066117 GCTTAGCTTTGTCCCCTAATACAAC 59.934 44.000 0.00 0.00 35.43 3.32
3628 4140 3.606687 AGCTTTGTCCCCTAATACAACG 58.393 45.455 0.00 0.00 35.43 4.10
3629 4141 2.681344 GCTTTGTCCCCTAATACAACGG 59.319 50.000 0.00 0.00 35.43 4.44
3630 4142 2.406596 TTGTCCCCTAATACAACGGC 57.593 50.000 0.00 0.00 30.88 5.68
3631 4143 1.277579 TGTCCCCTAATACAACGGCA 58.722 50.000 0.00 0.00 0.00 5.69
3632 4144 1.065998 TGTCCCCTAATACAACGGCAC 60.066 52.381 0.00 0.00 0.00 5.01
3633 4145 0.542805 TCCCCTAATACAACGGCACC 59.457 55.000 0.00 0.00 0.00 5.01
3634 4146 0.812412 CCCCTAATACAACGGCACCG 60.812 60.000 7.71 7.71 46.03 4.94
3635 4147 0.176219 CCCTAATACAACGGCACCGA 59.824 55.000 17.40 0.00 42.83 4.69
3636 4148 1.567504 CCTAATACAACGGCACCGAG 58.432 55.000 17.40 10.23 42.83 4.63
3637 4149 1.134907 CCTAATACAACGGCACCGAGT 60.135 52.381 17.40 15.45 42.83 4.18
3638 4150 1.924524 CTAATACAACGGCACCGAGTG 59.075 52.381 17.40 14.99 42.83 3.51
3639 4151 0.319083 AATACAACGGCACCGAGTGA 59.681 50.000 17.40 4.54 42.83 3.41
3640 4152 0.319083 ATACAACGGCACCGAGTGAA 59.681 50.000 17.40 0.61 42.83 3.18
3641 4153 0.319083 TACAACGGCACCGAGTGAAT 59.681 50.000 17.40 1.59 42.83 2.57
3642 4154 1.227999 ACAACGGCACCGAGTGAATG 61.228 55.000 17.40 7.06 42.83 2.67
3643 4155 1.070786 AACGGCACCGAGTGAATGT 59.929 52.632 17.40 0.84 42.83 2.71
3644 4156 0.949105 AACGGCACCGAGTGAATGTC 60.949 55.000 17.40 0.00 42.83 3.06
3645 4157 2.100631 CGGCACCGAGTGAATGTCC 61.101 63.158 2.01 0.00 42.83 4.02
3646 4158 1.296715 GGCACCGAGTGAATGTCCT 59.703 57.895 8.04 0.00 35.23 3.85
3647 4159 1.021390 GGCACCGAGTGAATGTCCTG 61.021 60.000 8.04 0.00 35.23 3.86
3648 4160 1.639298 GCACCGAGTGAATGTCCTGC 61.639 60.000 8.04 0.00 35.23 4.85
3649 4161 1.021390 CACCGAGTGAATGTCCTGCC 61.021 60.000 0.00 0.00 35.23 4.85
3650 4162 1.194781 ACCGAGTGAATGTCCTGCCT 61.195 55.000 0.00 0.00 0.00 4.75
3651 4163 0.460987 CCGAGTGAATGTCCTGCCTC 60.461 60.000 0.00 0.00 0.00 4.70
3652 4164 0.534412 CGAGTGAATGTCCTGCCTCT 59.466 55.000 0.00 0.00 0.00 3.69
3653 4165 1.738365 CGAGTGAATGTCCTGCCTCTG 60.738 57.143 0.00 0.00 0.00 3.35
3654 4166 0.035630 AGTGAATGTCCTGCCTCTGC 60.036 55.000 0.00 0.00 38.26 4.26
3678 4190 7.583860 CATAACATGATGCAAACAATGAACA 57.416 32.000 0.00 0.00 0.00 3.18
3679 4191 5.910637 AACATGATGCAAACAATGAACAC 57.089 34.783 0.00 0.00 0.00 3.32
3680 4192 3.982701 ACATGATGCAAACAATGAACACG 59.017 39.130 0.00 0.00 0.00 4.49
3681 4193 3.706802 TGATGCAAACAATGAACACGT 57.293 38.095 0.00 0.00 0.00 4.49
3682 4194 4.039151 TGATGCAAACAATGAACACGTT 57.961 36.364 0.00 0.00 0.00 3.99
3683 4195 4.041049 TGATGCAAACAATGAACACGTTC 58.959 39.130 2.89 2.89 39.91 3.95
3684 4196 2.803451 TGCAAACAATGAACACGTTCC 58.197 42.857 7.43 0.00 38.77 3.62
3685 4197 2.164422 TGCAAACAATGAACACGTTCCA 59.836 40.909 7.43 0.00 38.77 3.53
3686 4198 2.533942 GCAAACAATGAACACGTTCCAC 59.466 45.455 7.43 0.00 38.77 4.02
3687 4199 3.763902 CAAACAATGAACACGTTCCACA 58.236 40.909 7.43 0.00 38.77 4.17
3688 4200 3.414549 AACAATGAACACGTTCCACAC 57.585 42.857 7.43 0.00 38.77 3.82
3700 4212 2.557317 GTTCCACACGACCAAAAGAGA 58.443 47.619 0.00 0.00 0.00 3.10
3701 4213 2.940410 GTTCCACACGACCAAAAGAGAA 59.060 45.455 0.00 0.00 0.00 2.87
3702 4214 3.269538 TCCACACGACCAAAAGAGAAA 57.730 42.857 0.00 0.00 0.00 2.52
3703 4215 3.815809 TCCACACGACCAAAAGAGAAAT 58.184 40.909 0.00 0.00 0.00 2.17
3704 4216 4.963373 TCCACACGACCAAAAGAGAAATA 58.037 39.130 0.00 0.00 0.00 1.40
3705 4217 5.556915 TCCACACGACCAAAAGAGAAATAT 58.443 37.500 0.00 0.00 0.00 1.28
3706 4218 6.001460 TCCACACGACCAAAAGAGAAATATT 58.999 36.000 0.00 0.00 0.00 1.28
3707 4219 7.162761 TCCACACGACCAAAAGAGAAATATTA 58.837 34.615 0.00 0.00 0.00 0.98
3708 4220 7.827236 TCCACACGACCAAAAGAGAAATATTAT 59.173 33.333 0.00 0.00 0.00 1.28
3709 4221 8.458843 CCACACGACCAAAAGAGAAATATTATT 58.541 33.333 0.00 0.00 0.00 1.40
3710 4222 9.840427 CACACGACCAAAAGAGAAATATTATTT 57.160 29.630 1.25 1.25 0.00 1.40
3740 4252 9.449719 AGTAATTACTTCTACAAAGGATGTTGG 57.550 33.333 12.50 0.00 37.00 3.77
3741 4253 9.444600 GTAATTACTTCTACAAAGGATGTTGGA 57.555 33.333 8.41 0.00 43.63 3.53
3742 4254 8.567285 AATTACTTCTACAAAGGATGTTGGAG 57.433 34.615 0.00 0.00 43.58 3.86
3743 4255 5.568620 ACTTCTACAAAGGATGTTGGAGT 57.431 39.130 0.00 0.00 45.28 3.85
3745 4257 6.969828 CTTCTACAAAGGATGTTGGAGTAC 57.030 41.667 0.00 0.00 43.63 2.73
3746 4258 5.416271 TCTACAAAGGATGTTGGAGTACC 57.584 43.478 0.00 0.00 43.63 3.34
3747 4259 4.841813 TCTACAAAGGATGTTGGAGTACCA 59.158 41.667 0.00 0.00 43.63 3.25
3757 4269 1.908483 GGAGTACCAGCCTCCTTGG 59.092 63.158 0.00 0.00 44.29 3.61
3761 4273 3.971702 ACCAGCCTCCTTGGTGCC 61.972 66.667 0.00 0.00 46.85 5.01
3762 4274 3.655211 CCAGCCTCCTTGGTGCCT 61.655 66.667 0.00 0.00 38.35 4.75
3763 4275 2.045536 CAGCCTCCTTGGTGCCTC 60.046 66.667 0.00 0.00 38.35 4.70
3764 4276 3.334054 AGCCTCCTTGGTGCCTCC 61.334 66.667 0.00 0.00 38.35 4.30
3765 4277 4.785453 GCCTCCTTGGTGCCTCCG 62.785 72.222 0.00 0.00 39.52 4.63
3766 4278 4.785453 CCTCCTTGGTGCCTCCGC 62.785 72.222 0.00 0.00 39.52 5.54
3789 4301 2.681778 AGGAGGTCCTCTGCACCG 60.682 66.667 18.58 0.00 44.77 4.94
3790 4302 2.997897 GGAGGTCCTCTGCACCGT 60.998 66.667 18.58 0.00 39.13 4.83
3791 4303 2.584391 GGAGGTCCTCTGCACCGTT 61.584 63.158 18.58 0.00 39.13 4.44
3792 4304 1.079750 GAGGTCCTCTGCACCGTTC 60.080 63.158 12.02 0.00 39.13 3.95
3793 4305 2.432628 GGTCCTCTGCACCGTTCG 60.433 66.667 0.00 0.00 0.00 3.95
3794 4306 2.338984 GTCCTCTGCACCGTTCGT 59.661 61.111 0.00 0.00 0.00 3.85
3795 4307 1.300697 GTCCTCTGCACCGTTCGTT 60.301 57.895 0.00 0.00 0.00 3.85
3796 4308 0.038892 GTCCTCTGCACCGTTCGTTA 60.039 55.000 0.00 0.00 0.00 3.18
3797 4309 0.242825 TCCTCTGCACCGTTCGTTAG 59.757 55.000 0.00 0.00 0.00 2.34
3798 4310 0.736325 CCTCTGCACCGTTCGTTAGG 60.736 60.000 0.00 0.00 0.00 2.69
3799 4311 1.352156 CTCTGCACCGTTCGTTAGGC 61.352 60.000 0.00 0.00 0.00 3.93
3800 4312 2.726691 CTGCACCGTTCGTTAGGCG 61.727 63.158 0.00 0.00 43.01 5.52
3801 4313 2.735857 GCACCGTTCGTTAGGCGT 60.736 61.111 0.00 0.00 42.13 5.68
3802 4314 2.312436 GCACCGTTCGTTAGGCGTT 61.312 57.895 0.00 0.00 42.13 4.84
3803 4315 1.489824 CACCGTTCGTTAGGCGTTG 59.510 57.895 0.00 0.00 42.13 4.10
3804 4316 1.665599 ACCGTTCGTTAGGCGTTGG 60.666 57.895 0.00 0.00 42.13 3.77
3805 4317 2.472934 CGTTCGTTAGGCGTTGGC 59.527 61.111 0.00 0.00 42.13 4.52
3806 4318 2.311701 CGTTCGTTAGGCGTTGGCA 61.312 57.895 0.00 0.00 42.47 4.92
3807 4319 1.495951 GTTCGTTAGGCGTTGGCAG 59.504 57.895 0.00 0.00 42.47 4.85
3808 4320 2.322081 TTCGTTAGGCGTTGGCAGC 61.322 57.895 0.00 0.00 42.47 5.25
3809 4321 4.147322 CGTTAGGCGTTGGCAGCG 62.147 66.667 19.78 19.78 42.47 5.18
3831 4343 2.677848 GGTTCTTCCCTGGGGCTC 59.322 66.667 14.00 0.00 34.68 4.70
3832 4344 1.925972 GGTTCTTCCCTGGGGCTCT 60.926 63.158 14.00 0.00 34.68 4.09
3833 4345 0.620700 GGTTCTTCCCTGGGGCTCTA 60.621 60.000 14.00 0.00 34.68 2.43
3834 4346 1.512735 GTTCTTCCCTGGGGCTCTAT 58.487 55.000 14.00 0.00 34.68 1.98
3835 4347 1.141858 GTTCTTCCCTGGGGCTCTATG 59.858 57.143 14.00 0.00 34.68 2.23
3836 4348 1.056700 TCTTCCCTGGGGCTCTATGC 61.057 60.000 14.00 0.00 41.94 3.14
3837 4349 2.388890 CTTCCCTGGGGCTCTATGCG 62.389 65.000 14.00 0.00 44.05 4.73
3838 4350 3.164269 CCCTGGGGCTCTATGCGT 61.164 66.667 4.27 0.00 44.05 5.24
3839 4351 2.746375 CCCTGGGGCTCTATGCGTT 61.746 63.158 4.27 0.00 44.05 4.84
3840 4352 1.524621 CCTGGGGCTCTATGCGTTG 60.525 63.158 0.00 0.00 44.05 4.10
3841 4353 1.221840 CTGGGGCTCTATGCGTTGT 59.778 57.895 0.00 0.00 44.05 3.32
3842 4354 0.392998 CTGGGGCTCTATGCGTTGTT 60.393 55.000 0.00 0.00 44.05 2.83
3843 4355 0.392461 TGGGGCTCTATGCGTTGTTC 60.392 55.000 0.00 0.00 44.05 3.18
3844 4356 1.429148 GGGGCTCTATGCGTTGTTCG 61.429 60.000 0.00 0.00 44.05 3.95
3845 4357 0.459585 GGGCTCTATGCGTTGTTCGA 60.460 55.000 0.00 0.00 44.05 3.71
3846 4358 1.571919 GGCTCTATGCGTTGTTCGAT 58.428 50.000 0.00 0.00 44.05 3.59
3847 4359 1.523095 GGCTCTATGCGTTGTTCGATC 59.477 52.381 0.00 0.00 44.05 3.69
3848 4360 2.464865 GCTCTATGCGTTGTTCGATCT 58.535 47.619 0.00 0.00 42.86 2.75
3849 4361 3.550233 GGCTCTATGCGTTGTTCGATCTA 60.550 47.826 0.00 0.00 44.05 1.98
3850 4362 3.422546 GCTCTATGCGTTGTTCGATCTAC 59.577 47.826 0.00 0.00 42.86 2.59
3851 4363 3.961182 TCTATGCGTTGTTCGATCTACC 58.039 45.455 3.08 0.00 42.86 3.18
3852 4364 1.935933 ATGCGTTGTTCGATCTACCC 58.064 50.000 3.08 0.00 42.86 3.69
3853 4365 0.457166 TGCGTTGTTCGATCTACCCG 60.457 55.000 3.08 0.00 42.86 5.28
3854 4366 1.143969 GCGTTGTTCGATCTACCCGG 61.144 60.000 0.00 0.00 42.86 5.73
3855 4367 0.452987 CGTTGTTCGATCTACCCGGA 59.547 55.000 0.73 0.00 42.86 5.14
3856 4368 1.796617 CGTTGTTCGATCTACCCGGAC 60.797 57.143 0.73 0.00 42.86 4.79
3857 4369 0.452987 TTGTTCGATCTACCCGGACG 59.547 55.000 0.73 0.00 38.31 4.79
3858 4370 1.358046 GTTCGATCTACCCGGACGG 59.642 63.158 0.73 3.25 37.81 4.79
3859 4371 2.484062 TTCGATCTACCCGGACGGC 61.484 63.158 0.73 0.00 33.26 5.68
3860 4372 2.898920 TTCGATCTACCCGGACGGCT 62.899 60.000 0.73 0.00 33.26 5.52
3861 4373 2.905807 CGATCTACCCGGACGGCTC 61.906 68.421 0.73 0.00 33.26 4.70
3862 4374 2.905807 GATCTACCCGGACGGCTCG 61.906 68.421 0.73 0.00 33.26 5.03
3870 4382 4.899239 GGACGGCTCGCATCCAGG 62.899 72.222 6.57 0.00 32.35 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.078709 CACGTACCTTCGTAGACCGA 58.921 55.000 0.00 0.00 45.66 4.69
4 5 0.097674 CCACGTACCTTCGTAGACCG 59.902 60.000 0.00 0.00 42.27 4.79
5 6 1.131315 GTCCACGTACCTTCGTAGACC 59.869 57.143 6.55 0.00 42.92 3.85
6 7 1.806542 TGTCCACGTACCTTCGTAGAC 59.193 52.381 9.85 9.85 46.47 2.59
7 8 1.806542 GTGTCCACGTACCTTCGTAGA 59.193 52.381 0.00 0.00 42.27 2.59
8 9 1.536766 TGTGTCCACGTACCTTCGTAG 59.463 52.381 0.00 0.00 42.27 3.51
9 10 1.266718 GTGTGTCCACGTACCTTCGTA 59.733 52.381 0.00 0.00 42.27 3.43
10 11 0.031178 GTGTGTCCACGTACCTTCGT 59.969 55.000 0.00 0.00 45.10 3.85
11 12 0.313043 AGTGTGTCCACGTACCTTCG 59.687 55.000 0.00 0.00 46.56 3.79
12 13 1.612463 AGAGTGTGTCCACGTACCTTC 59.388 52.381 0.00 0.00 46.56 3.46
13 14 1.612463 GAGAGTGTGTCCACGTACCTT 59.388 52.381 0.00 0.00 46.56 3.50
14 15 1.245732 GAGAGTGTGTCCACGTACCT 58.754 55.000 0.00 0.00 46.56 3.08
15 16 0.243095 GGAGAGTGTGTCCACGTACC 59.757 60.000 0.00 0.00 46.56 3.34
16 17 0.243095 GGGAGAGTGTGTCCACGTAC 59.757 60.000 0.00 0.00 46.56 3.67
17 18 0.896940 GGGGAGAGTGTGTCCACGTA 60.897 60.000 0.00 0.00 46.56 3.57
18 19 2.207924 GGGGAGAGTGTGTCCACGT 61.208 63.158 0.00 0.00 46.56 4.49
19 20 2.657237 GGGGAGAGTGTGTCCACG 59.343 66.667 0.00 0.00 46.56 4.94
20 21 1.536662 AGGGGGAGAGTGTGTCCAC 60.537 63.158 0.00 0.00 42.17 4.02
21 22 1.229209 GAGGGGGAGAGTGTGTCCA 60.229 63.158 0.00 0.00 35.57 4.02
22 23 0.973496 GAGAGGGGGAGAGTGTGTCC 60.973 65.000 0.00 0.00 0.00 4.02
23 24 1.316706 CGAGAGGGGGAGAGTGTGTC 61.317 65.000 0.00 0.00 0.00 3.67
24 25 1.304547 CGAGAGGGGGAGAGTGTGT 60.305 63.158 0.00 0.00 0.00 3.72
25 26 0.900647 AACGAGAGGGGGAGAGTGTG 60.901 60.000 0.00 0.00 0.00 3.82
26 27 0.900647 CAACGAGAGGGGGAGAGTGT 60.901 60.000 0.00 0.00 0.00 3.55
27 28 1.893786 CAACGAGAGGGGGAGAGTG 59.106 63.158 0.00 0.00 0.00 3.51
28 29 1.985116 GCAACGAGAGGGGGAGAGT 60.985 63.158 0.00 0.00 0.00 3.24
29 30 0.395862 TAGCAACGAGAGGGGGAGAG 60.396 60.000 0.00 0.00 0.00 3.20
30 31 0.261991 ATAGCAACGAGAGGGGGAGA 59.738 55.000 0.00 0.00 0.00 3.71
31 32 0.390860 CATAGCAACGAGAGGGGGAG 59.609 60.000 0.00 0.00 0.00 4.30
32 33 1.686325 GCATAGCAACGAGAGGGGGA 61.686 60.000 0.00 0.00 0.00 4.81
33 34 1.227674 GCATAGCAACGAGAGGGGG 60.228 63.158 0.00 0.00 0.00 5.40
34 35 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
35 36 1.069823 AGATGCATAGCAACGAGAGGG 59.930 52.381 0.00 0.00 43.62 4.30
36 37 2.402305 GAGATGCATAGCAACGAGAGG 58.598 52.381 0.00 0.00 43.62 3.69
37 38 2.035704 AGGAGATGCATAGCAACGAGAG 59.964 50.000 0.00 0.00 43.62 3.20
38 39 2.034878 AGGAGATGCATAGCAACGAGA 58.965 47.619 0.00 0.00 43.62 4.04
39 40 2.522836 AGGAGATGCATAGCAACGAG 57.477 50.000 0.00 0.00 43.62 4.18
40 41 3.222603 TCTAGGAGATGCATAGCAACGA 58.777 45.455 0.00 0.00 43.62 3.85
41 42 3.650070 TCTAGGAGATGCATAGCAACG 57.350 47.619 0.00 0.00 43.62 4.10
42 43 6.522625 TCTATCTAGGAGATGCATAGCAAC 57.477 41.667 0.00 0.00 43.62 4.17
43 44 7.124721 AGATCTATCTAGGAGATGCATAGCAA 58.875 38.462 0.00 0.00 37.47 3.91
44 45 6.671605 AGATCTATCTAGGAGATGCATAGCA 58.328 40.000 0.00 0.00 38.03 3.49
45 46 7.428020 CAAGATCTATCTAGGAGATGCATAGC 58.572 42.308 0.00 0.00 35.37 2.97
46 47 7.428020 GCAAGATCTATCTAGGAGATGCATAG 58.572 42.308 0.00 0.00 35.37 2.23
47 48 6.039159 CGCAAGATCTATCTAGGAGATGCATA 59.961 42.308 0.00 0.00 35.65 3.14
48 49 5.163530 CGCAAGATCTATCTAGGAGATGCAT 60.164 44.000 0.00 0.00 35.65 3.96
49 50 4.157472 CGCAAGATCTATCTAGGAGATGCA 59.843 45.833 11.48 0.00 35.65 3.96
50 51 4.157656 ACGCAAGATCTATCTAGGAGATGC 59.842 45.833 11.48 9.81 36.70 3.91
51 52 5.414144 TCACGCAAGATCTATCTAGGAGATG 59.586 44.000 11.48 2.82 36.70 2.90
52 53 5.565509 TCACGCAAGATCTATCTAGGAGAT 58.434 41.667 0.00 7.55 38.77 2.75
53 54 4.974399 TCACGCAAGATCTATCTAGGAGA 58.026 43.478 0.00 0.00 43.62 3.71
54 55 5.447144 CGATCACGCAAGATCTATCTAGGAG 60.447 48.000 12.06 0.00 41.74 3.69
55 56 4.393371 CGATCACGCAAGATCTATCTAGGA 59.607 45.833 12.06 0.00 41.74 2.94
56 57 4.155099 ACGATCACGCAAGATCTATCTAGG 59.845 45.833 12.06 0.32 41.74 3.02
57 58 5.289917 ACGATCACGCAAGATCTATCTAG 57.710 43.478 12.06 0.00 41.74 2.43
58 59 5.351740 CCTACGATCACGCAAGATCTATCTA 59.648 44.000 12.06 0.00 41.74 1.98
59 60 4.155099 CCTACGATCACGCAAGATCTATCT 59.845 45.833 12.06 0.00 41.74 1.98
60 61 4.154375 TCCTACGATCACGCAAGATCTATC 59.846 45.833 12.06 0.00 41.74 2.08
61 62 4.072839 TCCTACGATCACGCAAGATCTAT 58.927 43.478 12.06 4.73 41.74 1.98
62 63 3.473625 TCCTACGATCACGCAAGATCTA 58.526 45.455 12.06 4.90 41.74 1.98
63 64 2.298610 TCCTACGATCACGCAAGATCT 58.701 47.619 12.06 0.00 41.74 2.75
64 65 2.776312 TCCTACGATCACGCAAGATC 57.224 50.000 5.52 5.52 43.96 2.75
65 66 3.735237 ATTCCTACGATCACGCAAGAT 57.265 42.857 0.00 0.00 43.96 2.40
66 67 3.520290 AATTCCTACGATCACGCAAGA 57.480 42.857 0.00 0.00 43.96 3.02
67 68 4.600012 AAAATTCCTACGATCACGCAAG 57.400 40.909 0.00 0.00 43.96 4.01
87 88 5.176590 GGAACGTAGCATGCAATTTCAAAAA 59.823 36.000 21.98 0.00 0.00 1.94
88 89 4.683781 GGAACGTAGCATGCAATTTCAAAA 59.316 37.500 21.98 0.00 0.00 2.44
89 90 4.233789 GGAACGTAGCATGCAATTTCAAA 58.766 39.130 21.98 0.00 0.00 2.69
90 91 3.366883 GGGAACGTAGCATGCAATTTCAA 60.367 43.478 21.98 0.00 0.00 2.69
91 92 2.163412 GGGAACGTAGCATGCAATTTCA 59.837 45.455 21.98 0.00 0.00 2.69
92 93 2.479560 GGGGAACGTAGCATGCAATTTC 60.480 50.000 21.98 15.31 0.00 2.17
93 94 1.476488 GGGGAACGTAGCATGCAATTT 59.524 47.619 21.98 7.02 0.00 1.82
94 95 1.102978 GGGGAACGTAGCATGCAATT 58.897 50.000 21.98 7.96 0.00 2.32
95 96 0.034574 TGGGGAACGTAGCATGCAAT 60.035 50.000 21.98 1.90 0.00 3.56
96 97 0.250945 TTGGGGAACGTAGCATGCAA 60.251 50.000 21.98 0.00 0.00 4.08
97 98 0.958382 GTTGGGGAACGTAGCATGCA 60.958 55.000 21.98 2.77 0.00 3.96
98 99 0.958382 TGTTGGGGAACGTAGCATGC 60.958 55.000 10.51 10.51 0.00 4.06
99 100 1.086696 CTGTTGGGGAACGTAGCATG 58.913 55.000 0.00 0.00 0.00 4.06
100 101 0.981183 TCTGTTGGGGAACGTAGCAT 59.019 50.000 0.00 0.00 0.00 3.79
101 102 0.034337 GTCTGTTGGGGAACGTAGCA 59.966 55.000 0.00 0.00 0.00 3.49
102 103 0.034337 TGTCTGTTGGGGAACGTAGC 59.966 55.000 0.00 0.00 0.00 3.58
103 104 2.536761 TTGTCTGTTGGGGAACGTAG 57.463 50.000 0.00 0.00 0.00 3.51
104 105 3.495434 ATTTGTCTGTTGGGGAACGTA 57.505 42.857 0.00 0.00 0.00 3.57
105 106 2.358322 ATTTGTCTGTTGGGGAACGT 57.642 45.000 0.00 0.00 0.00 3.99
106 107 3.670625 TCTATTTGTCTGTTGGGGAACG 58.329 45.455 0.00 0.00 0.00 3.95
107 108 4.332819 CGATCTATTTGTCTGTTGGGGAAC 59.667 45.833 0.00 0.00 0.00 3.62
108 109 4.513442 CGATCTATTTGTCTGTTGGGGAA 58.487 43.478 0.00 0.00 0.00 3.97
109 110 3.118408 CCGATCTATTTGTCTGTTGGGGA 60.118 47.826 0.00 0.00 0.00 4.81
110 111 3.118408 TCCGATCTATTTGTCTGTTGGGG 60.118 47.826 0.00 0.00 0.00 4.96
111 112 4.137116 TCCGATCTATTTGTCTGTTGGG 57.863 45.455 0.00 0.00 0.00 4.12
112 113 5.447818 GCTTTCCGATCTATTTGTCTGTTGG 60.448 44.000 0.00 0.00 0.00 3.77
113 114 5.122239 TGCTTTCCGATCTATTTGTCTGTTG 59.878 40.000 0.00 0.00 0.00 3.33
114 115 5.245531 TGCTTTCCGATCTATTTGTCTGTT 58.754 37.500 0.00 0.00 0.00 3.16
115 116 4.832248 TGCTTTCCGATCTATTTGTCTGT 58.168 39.130 0.00 0.00 0.00 3.41
116 117 5.998454 ATGCTTTCCGATCTATTTGTCTG 57.002 39.130 0.00 0.00 0.00 3.51
257 260 3.634448 GTCCTCTTCTGAGATCATTCCGA 59.366 47.826 0.00 0.00 42.73 4.55
295 298 4.871822 TCTCTCTCTCTCTCTCTCTCTCA 58.128 47.826 0.00 0.00 0.00 3.27
298 301 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
300 303 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
303 306 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
304 307 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
305 308 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
306 309 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
307 310 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
308 311 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
309 312 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
310 313 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
311 314 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
312 315 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
313 316 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
314 317 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
315 318 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
316 319 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
317 320 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
318 321 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
319 322 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
320 323 3.244044 GGCTCTCTCTCTCTCTCTCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
375 422 3.258372 TGATGGTGTGTGAGTAGTTCCTC 59.742 47.826 0.00 0.00 0.00 3.71
452 510 0.250770 GGAGCCTTGTTCCGGAGTTT 60.251 55.000 3.34 0.00 0.00 2.66
480 538 0.818040 AAGCCTTTGTTCCGAAGCGT 60.818 50.000 0.00 0.00 0.00 5.07
506 564 5.695818 CGAGACCCGAAACAATTTTATTGT 58.304 37.500 0.00 0.00 41.76 2.71
769 854 4.035558 TCAGTGTCAGTTGATGTTTTCTGC 59.964 41.667 0.00 0.00 0.00 4.26
902 992 4.095932 GGTGTGTGTGATACGTCTCTGATA 59.904 45.833 0.00 0.00 0.00 2.15
970 1061 0.378257 GTCACGTCGCTCCGGTATTA 59.622 55.000 0.00 0.00 0.00 0.98
975 1066 4.778415 CCAGTCACGTCGCTCCGG 62.778 72.222 0.00 0.00 0.00 5.14
1049 1140 3.590824 GCTGGCGTGCCTGTTTAT 58.409 55.556 17.50 0.00 37.37 1.40
1061 1152 3.959991 GAGTGGGTTCTCGGCTGGC 62.960 68.421 0.00 0.00 0.00 4.85
1064 1155 3.382832 CGGAGTGGGTTCTCGGCT 61.383 66.667 0.00 0.00 35.52 5.52
1118 1210 3.430790 CCTTCTTCTCCGTGCATATGTCA 60.431 47.826 4.29 0.11 0.00 3.58
1134 1226 7.391833 GTGTCTTCTAATTTCATGGACCTTCTT 59.608 37.037 0.00 0.00 0.00 2.52
1137 1229 6.542821 TGTGTCTTCTAATTTCATGGACCTT 58.457 36.000 0.00 0.00 0.00 3.50
1158 1250 2.238144 AGATCCCCTGTGTGAAGATGTG 59.762 50.000 0.00 0.00 0.00 3.21
1170 1462 4.738541 GCATTATTTTGCACAGATCCCCTG 60.739 45.833 0.00 0.00 42.31 4.45
1248 1540 2.844348 ACGGTTCATTGGAGGTCCTATT 59.156 45.455 0.00 0.00 36.82 1.73
1355 1647 5.183140 CCCGGAACAAATGAGAGTAAAATGT 59.817 40.000 0.73 0.00 0.00 2.71
1600 1894 2.501610 GAGAAGCTCGCCCGGAAT 59.498 61.111 0.73 0.00 0.00 3.01
1993 2311 0.178909 AGGGGATCGCAGATGAGGAT 60.179 55.000 12.32 0.00 45.12 3.24
2125 2461 1.663695 CACGTCACCCTGAAGTTTGT 58.336 50.000 0.00 0.00 36.99 2.83
2371 2764 2.286477 CGTACTCTATGTCGTCCAGCAG 60.286 54.545 0.00 0.00 0.00 4.24
2383 2776 1.783031 CGGAGCACGGCGTACTCTAT 61.783 60.000 32.22 4.85 39.42 1.98
2384 2777 2.466982 CGGAGCACGGCGTACTCTA 61.467 63.158 32.22 0.00 39.42 2.43
2412 2805 2.125673 GCGTACTCCGTGGCATGT 60.126 61.111 5.89 0.00 39.32 3.21
2430 2823 2.196776 GGCCATGGCAGCTGGTAT 59.803 61.111 36.56 0.00 44.11 2.73
2472 2867 0.754217 CAGCCCACCAATGCAGCTAT 60.754 55.000 0.00 0.00 33.48 2.97
2507 2907 2.092914 GGAATTGAGAACCTGGGACGAT 60.093 50.000 0.00 0.00 0.00 3.73
2557 2964 0.318441 ACAGACACACATGGTCCTCG 59.682 55.000 0.00 0.00 35.89 4.63
2762 3209 3.399440 AGTCAAACTGAGCTTCTCCAG 57.601 47.619 0.00 0.00 0.00 3.86
3010 3462 4.517285 ACATTCTGCGACCATCTGTAATT 58.483 39.130 0.00 0.00 0.00 1.40
3011 3463 4.142609 ACATTCTGCGACCATCTGTAAT 57.857 40.909 0.00 0.00 0.00 1.89
3015 3467 2.222678 GCATACATTCTGCGACCATCTG 59.777 50.000 0.00 0.00 0.00 2.90
3294 3806 8.985805 CATCGAAAACTGTTAAAACCTACTAGT 58.014 33.333 0.00 0.00 0.00 2.57
3295 3807 8.985805 ACATCGAAAACTGTTAAAACCTACTAG 58.014 33.333 0.00 0.00 0.00 2.57
3296 3808 8.891671 ACATCGAAAACTGTTAAAACCTACTA 57.108 30.769 0.00 0.00 0.00 1.82
3297 3809 7.797038 ACATCGAAAACTGTTAAAACCTACT 57.203 32.000 0.00 0.00 0.00 2.57
3298 3810 8.225777 CCTACATCGAAAACTGTTAAAACCTAC 58.774 37.037 0.00 0.00 0.00 3.18
3328 3840 3.432890 GCCTATATCTAATGCTCTGCCCC 60.433 52.174 0.00 0.00 0.00 5.80
3345 3857 3.937814 TCACATCAAACTGTTCGCCTAT 58.062 40.909 0.00 0.00 0.00 2.57
3347 3859 2.254546 TCACATCAAACTGTTCGCCT 57.745 45.000 0.00 0.00 0.00 5.52
3361 3873 4.133820 TCATCACTTTCACGGTTTCACAT 58.866 39.130 0.00 0.00 0.00 3.21
3362 3874 3.536570 TCATCACTTTCACGGTTTCACA 58.463 40.909 0.00 0.00 0.00 3.58
3363 3875 4.749245 ATCATCACTTTCACGGTTTCAC 57.251 40.909 0.00 0.00 0.00 3.18
3364 3876 5.937540 ACATATCATCACTTTCACGGTTTCA 59.062 36.000 0.00 0.00 0.00 2.69
3365 3877 6.250819 CACATATCATCACTTTCACGGTTTC 58.749 40.000 0.00 0.00 0.00 2.78
3366 3878 5.123820 CCACATATCATCACTTTCACGGTTT 59.876 40.000 0.00 0.00 0.00 3.27
3367 3879 4.635765 CCACATATCATCACTTTCACGGTT 59.364 41.667 0.00 0.00 0.00 4.44
3368 3880 4.191544 CCACATATCATCACTTTCACGGT 58.808 43.478 0.00 0.00 0.00 4.83
3369 3881 3.002656 GCCACATATCATCACTTTCACGG 59.997 47.826 0.00 0.00 0.00 4.94
3370 3882 3.622612 TGCCACATATCATCACTTTCACG 59.377 43.478 0.00 0.00 0.00 4.35
3371 3883 4.497006 GCTGCCACATATCATCACTTTCAC 60.497 45.833 0.00 0.00 0.00 3.18
3397 3909 1.543802 CACAGAGAGTGGAGACTGGAC 59.456 57.143 0.00 0.00 44.69 4.02
3417 3929 0.392461 TGGCCAAATGACCTCGCTAC 60.392 55.000 0.61 0.00 0.00 3.58
3437 3949 1.794714 TACCATTCTCCTCTGGGCTC 58.205 55.000 0.00 0.00 36.82 4.70
3463 3975 0.995024 AGACTTGCCTAGCCACCATT 59.005 50.000 0.00 0.00 0.00 3.16
3464 3976 0.995024 AAGACTTGCCTAGCCACCAT 59.005 50.000 0.00 0.00 0.00 3.55
3465 3977 0.036732 CAAGACTTGCCTAGCCACCA 59.963 55.000 1.43 0.00 0.00 4.17
3466 3978 0.036875 ACAAGACTTGCCTAGCCACC 59.963 55.000 15.24 0.00 0.00 4.61
3467 3979 1.160137 CACAAGACTTGCCTAGCCAC 58.840 55.000 15.24 0.00 0.00 5.01
3468 3980 0.764890 ACACAAGACTTGCCTAGCCA 59.235 50.000 15.24 0.00 0.00 4.75
3469 3981 1.160137 CACACAAGACTTGCCTAGCC 58.840 55.000 15.24 0.00 0.00 3.93
3470 3982 1.532868 CACACACAAGACTTGCCTAGC 59.467 52.381 15.24 0.00 0.00 3.42
3471 3983 1.532868 GCACACACAAGACTTGCCTAG 59.467 52.381 15.24 5.67 0.00 3.02
3472 3984 1.593196 GCACACACAAGACTTGCCTA 58.407 50.000 15.24 0.00 0.00 3.93
3473 3985 1.439353 CGCACACACAAGACTTGCCT 61.439 55.000 15.24 0.00 0.00 4.75
3474 3986 1.009675 CGCACACACAAGACTTGCC 60.010 57.895 15.24 0.00 0.00 4.52
3475 3987 0.041839 CTCGCACACACAAGACTTGC 60.042 55.000 15.24 0.00 0.00 4.01
3476 3988 1.290203 ACTCGCACACACAAGACTTG 58.710 50.000 13.77 13.77 0.00 3.16
3477 3989 2.024176 AACTCGCACACACAAGACTT 57.976 45.000 0.00 0.00 0.00 3.01
3478 3990 2.024176 AAACTCGCACACACAAGACT 57.976 45.000 0.00 0.00 0.00 3.24
3479 3991 2.825086 AAAACTCGCACACACAAGAC 57.175 45.000 0.00 0.00 0.00 3.01
3480 3992 3.006940 AGAAAAACTCGCACACACAAGA 58.993 40.909 0.00 0.00 0.00 3.02
3481 3993 3.100817 CAGAAAAACTCGCACACACAAG 58.899 45.455 0.00 0.00 0.00 3.16
3482 3994 2.486203 ACAGAAAAACTCGCACACACAA 59.514 40.909 0.00 0.00 0.00 3.33
3483 3995 2.080693 ACAGAAAAACTCGCACACACA 58.919 42.857 0.00 0.00 0.00 3.72
3484 3996 2.825086 ACAGAAAAACTCGCACACAC 57.175 45.000 0.00 0.00 0.00 3.82
3485 3997 6.425417 TCAATATACAGAAAAACTCGCACACA 59.575 34.615 0.00 0.00 0.00 3.72
3486 3998 6.827641 TCAATATACAGAAAAACTCGCACAC 58.172 36.000 0.00 0.00 0.00 3.82
3487 3999 7.463544 CATCAATATACAGAAAAACTCGCACA 58.536 34.615 0.00 0.00 0.00 4.57
3488 4000 6.412072 GCATCAATATACAGAAAAACTCGCAC 59.588 38.462 0.00 0.00 0.00 5.34
3489 4001 6.093357 TGCATCAATATACAGAAAAACTCGCA 59.907 34.615 0.00 0.00 0.00 5.10
3490 4002 6.486248 TGCATCAATATACAGAAAAACTCGC 58.514 36.000 0.00 0.00 0.00 5.03
3491 4003 7.588854 CCATGCATCAATATACAGAAAAACTCG 59.411 37.037 0.00 0.00 0.00 4.18
3492 4004 8.408601 ACCATGCATCAATATACAGAAAAACTC 58.591 33.333 0.00 0.00 0.00 3.01
3493 4005 8.297470 ACCATGCATCAATATACAGAAAAACT 57.703 30.769 0.00 0.00 0.00 2.66
3494 4006 9.450807 GTACCATGCATCAATATACAGAAAAAC 57.549 33.333 0.00 0.00 0.00 2.43
3495 4007 9.407380 AGTACCATGCATCAATATACAGAAAAA 57.593 29.630 0.00 0.00 0.00 1.94
3496 4008 8.978874 AGTACCATGCATCAATATACAGAAAA 57.021 30.769 0.00 0.00 0.00 2.29
3497 4009 8.432013 AGAGTACCATGCATCAATATACAGAAA 58.568 33.333 0.00 0.00 0.00 2.52
3498 4010 7.874528 CAGAGTACCATGCATCAATATACAGAA 59.125 37.037 0.00 0.00 0.00 3.02
3499 4011 7.233348 TCAGAGTACCATGCATCAATATACAGA 59.767 37.037 0.00 0.00 0.00 3.41
3500 4012 7.381323 TCAGAGTACCATGCATCAATATACAG 58.619 38.462 0.00 0.00 0.00 2.74
3501 4013 7.233348 TCTCAGAGTACCATGCATCAATATACA 59.767 37.037 0.00 0.00 0.00 2.29
3502 4014 7.606349 TCTCAGAGTACCATGCATCAATATAC 58.394 38.462 0.00 0.00 0.00 1.47
3503 4015 7.578380 GCTCTCAGAGTACCATGCATCAATATA 60.578 40.741 2.93 0.00 31.39 0.86
3504 4016 6.676990 TCTCAGAGTACCATGCATCAATAT 57.323 37.500 0.00 0.00 0.00 1.28
3505 4017 5.510349 GCTCTCAGAGTACCATGCATCAATA 60.510 44.000 2.93 0.00 31.39 1.90
3506 4018 4.743045 GCTCTCAGAGTACCATGCATCAAT 60.743 45.833 2.93 0.00 31.39 2.57
3507 4019 3.431346 GCTCTCAGAGTACCATGCATCAA 60.431 47.826 2.93 0.00 31.39 2.57
3508 4020 2.102084 GCTCTCAGAGTACCATGCATCA 59.898 50.000 2.93 0.00 31.39 3.07
3509 4021 2.102084 TGCTCTCAGAGTACCATGCATC 59.898 50.000 2.93 0.00 31.39 3.91
3510 4022 2.102757 CTGCTCTCAGAGTACCATGCAT 59.897 50.000 2.93 0.00 42.95 3.96
3511 4023 1.479730 CTGCTCTCAGAGTACCATGCA 59.520 52.381 2.93 0.00 42.95 3.96
3512 4024 1.805871 GCTGCTCTCAGAGTACCATGC 60.806 57.143 2.93 0.00 42.95 4.06
3513 4025 1.479730 TGCTGCTCTCAGAGTACCATG 59.520 52.381 2.93 0.00 42.95 3.66
3514 4026 1.755959 CTGCTGCTCTCAGAGTACCAT 59.244 52.381 2.93 0.00 42.95 3.55
3515 4027 1.180907 CTGCTGCTCTCAGAGTACCA 58.819 55.000 2.93 0.00 42.95 3.25
3516 4028 0.179113 GCTGCTGCTCTCAGAGTACC 60.179 60.000 8.53 0.00 42.95 3.34
3517 4029 0.529833 TGCTGCTGCTCTCAGAGTAC 59.470 55.000 17.00 0.00 42.95 2.73
3518 4030 0.529833 GTGCTGCTGCTCTCAGAGTA 59.470 55.000 17.00 0.00 42.95 2.59
3519 4031 1.292860 GTGCTGCTGCTCTCAGAGT 59.707 57.895 17.00 0.00 42.95 3.24
3520 4032 0.738063 CTGTGCTGCTGCTCTCAGAG 60.738 60.000 17.00 0.00 42.95 3.35
3521 4033 1.292541 CTGTGCTGCTGCTCTCAGA 59.707 57.895 17.00 0.00 42.95 3.27
3522 4034 1.742140 CCTGTGCTGCTGCTCTCAG 60.742 63.158 17.00 18.74 43.16 3.35
3523 4035 2.048419 AACCTGTGCTGCTGCTCTCA 62.048 55.000 17.00 11.63 40.48 3.27
3524 4036 0.036952 TAACCTGTGCTGCTGCTCTC 60.037 55.000 17.00 7.87 40.48 3.20
3525 4037 0.036577 CTAACCTGTGCTGCTGCTCT 60.037 55.000 17.00 0.19 40.48 4.09
3526 4038 0.036952 TCTAACCTGTGCTGCTGCTC 60.037 55.000 17.00 13.53 40.48 4.26
3527 4039 0.617413 ATCTAACCTGTGCTGCTGCT 59.383 50.000 17.00 0.00 40.48 4.24
3528 4040 0.731417 CATCTAACCTGTGCTGCTGC 59.269 55.000 8.89 8.89 40.20 5.25
3529 4041 0.731417 GCATCTAACCTGTGCTGCTG 59.269 55.000 0.00 0.00 36.02 4.41
3530 4042 0.617413 AGCATCTAACCTGTGCTGCT 59.383 50.000 0.00 0.00 46.60 4.24
3531 4043 3.165606 AGCATCTAACCTGTGCTGC 57.834 52.632 0.00 0.00 46.60 5.25
3534 4046 0.731417 CAGCAGCATCTAACCTGTGC 59.269 55.000 0.00 0.00 39.10 4.57
3535 4047 2.391616 TCAGCAGCATCTAACCTGTG 57.608 50.000 0.00 0.00 0.00 3.66
3536 4048 3.423539 TTTCAGCAGCATCTAACCTGT 57.576 42.857 0.00 0.00 0.00 4.00
3537 4049 4.978083 ATTTTCAGCAGCATCTAACCTG 57.022 40.909 0.00 0.00 0.00 4.00
3538 4050 5.990120 AAATTTTCAGCAGCATCTAACCT 57.010 34.783 0.00 0.00 0.00 3.50
3539 4051 5.928264 ACAAAATTTTCAGCAGCATCTAACC 59.072 36.000 0.00 0.00 0.00 2.85
3540 4052 6.617105 GCACAAAATTTTCAGCAGCATCTAAC 60.617 38.462 15.59 0.00 0.00 2.34
3541 4053 5.406175 GCACAAAATTTTCAGCAGCATCTAA 59.594 36.000 15.59 0.00 0.00 2.10
3542 4054 4.925054 GCACAAAATTTTCAGCAGCATCTA 59.075 37.500 15.59 0.00 0.00 1.98
3543 4055 3.744426 GCACAAAATTTTCAGCAGCATCT 59.256 39.130 15.59 0.00 0.00 2.90
3544 4056 3.495377 TGCACAAAATTTTCAGCAGCATC 59.505 39.130 18.06 0.00 0.00 3.91
3545 4057 3.468770 TGCACAAAATTTTCAGCAGCAT 58.531 36.364 18.06 0.00 0.00 3.79
3546 4058 2.902523 TGCACAAAATTTTCAGCAGCA 58.097 38.095 18.06 12.78 0.00 4.41
3547 4059 3.556775 TCTTGCACAAAATTTTCAGCAGC 59.443 39.130 19.96 12.13 31.41 5.25
3548 4060 5.721876 TTCTTGCACAAAATTTTCAGCAG 57.278 34.783 19.96 15.78 31.41 4.24
3549 4061 7.966246 ATATTCTTGCACAAAATTTTCAGCA 57.034 28.000 18.06 18.06 0.00 4.41
3550 4062 7.747357 CCAATATTCTTGCACAAAATTTTCAGC 59.253 33.333 14.24 14.24 0.00 4.26
3551 4063 8.231837 CCCAATATTCTTGCACAAAATTTTCAG 58.768 33.333 0.00 0.00 0.00 3.02
3552 4064 7.718753 ACCCAATATTCTTGCACAAAATTTTCA 59.281 29.630 0.00 0.00 0.00 2.69
3553 4065 8.016801 CACCCAATATTCTTGCACAAAATTTTC 58.983 33.333 0.00 0.00 0.00 2.29
3554 4066 7.501892 ACACCCAATATTCTTGCACAAAATTTT 59.498 29.630 0.00 0.00 0.00 1.82
3555 4067 6.997476 ACACCCAATATTCTTGCACAAAATTT 59.003 30.769 0.00 0.00 0.00 1.82
3556 4068 6.427547 CACACCCAATATTCTTGCACAAAATT 59.572 34.615 0.00 0.00 0.00 1.82
3557 4069 5.933463 CACACCCAATATTCTTGCACAAAAT 59.067 36.000 0.00 0.00 0.00 1.82
3558 4070 5.295950 CACACCCAATATTCTTGCACAAAA 58.704 37.500 0.00 0.00 0.00 2.44
3559 4071 4.262377 CCACACCCAATATTCTTGCACAAA 60.262 41.667 0.00 0.00 0.00 2.83
3560 4072 3.257873 CCACACCCAATATTCTTGCACAA 59.742 43.478 0.00 0.00 0.00 3.33
3561 4073 2.824936 CCACACCCAATATTCTTGCACA 59.175 45.455 0.00 0.00 0.00 4.57
3562 4074 3.088532 TCCACACCCAATATTCTTGCAC 58.911 45.455 0.00 0.00 0.00 4.57
3563 4075 3.448093 TCCACACCCAATATTCTTGCA 57.552 42.857 0.00 0.00 0.00 4.08
3564 4076 4.685924 CAATCCACACCCAATATTCTTGC 58.314 43.478 0.00 0.00 0.00 4.01
3565 4077 4.160065 TGCAATCCACACCCAATATTCTTG 59.840 41.667 0.00 0.00 0.00 3.02
3566 4078 4.352009 TGCAATCCACACCCAATATTCTT 58.648 39.130 0.00 0.00 0.00 2.52
3567 4079 3.979911 TGCAATCCACACCCAATATTCT 58.020 40.909 0.00 0.00 0.00 2.40
3568 4080 4.942761 ATGCAATCCACACCCAATATTC 57.057 40.909 0.00 0.00 0.00 1.75
3569 4081 4.588528 GGTATGCAATCCACACCCAATATT 59.411 41.667 0.00 0.00 0.00 1.28
3570 4082 4.140947 AGGTATGCAATCCACACCCAATAT 60.141 41.667 12.05 0.00 0.00 1.28
3571 4083 3.204158 AGGTATGCAATCCACACCCAATA 59.796 43.478 12.05 0.00 0.00 1.90
3572 4084 2.024080 AGGTATGCAATCCACACCCAAT 60.024 45.455 12.05 0.00 0.00 3.16
3573 4085 1.357420 AGGTATGCAATCCACACCCAA 59.643 47.619 12.05 0.00 0.00 4.12
3574 4086 0.998928 AGGTATGCAATCCACACCCA 59.001 50.000 12.05 0.00 0.00 4.51
3575 4087 2.143876 AAGGTATGCAATCCACACCC 57.856 50.000 12.05 0.00 0.00 4.61
3576 4088 3.088532 TCAAAGGTATGCAATCCACACC 58.911 45.455 12.05 3.73 0.00 4.16
3577 4089 4.218417 AGTTCAAAGGTATGCAATCCACAC 59.782 41.667 12.05 2.84 0.00 3.82
3578 4090 4.406456 AGTTCAAAGGTATGCAATCCACA 58.594 39.130 12.05 0.00 0.00 4.17
3579 4091 6.509418 TTAGTTCAAAGGTATGCAATCCAC 57.491 37.500 12.05 2.66 0.00 4.02
3580 4092 5.125417 GCTTAGTTCAAAGGTATGCAATCCA 59.875 40.000 12.05 0.00 0.00 3.41
3581 4093 5.358160 AGCTTAGTTCAAAGGTATGCAATCC 59.642 40.000 0.00 0.00 35.51 3.01
3582 4094 6.442513 AGCTTAGTTCAAAGGTATGCAATC 57.557 37.500 0.00 0.00 35.51 2.67
3583 4095 6.840780 AAGCTTAGTTCAAAGGTATGCAAT 57.159 33.333 0.00 0.00 36.22 3.56
3584 4096 6.128007 GCTAAGCTTAGTTCAAAGGTATGCAA 60.128 38.462 29.42 0.00 36.22 4.08
3585 4097 5.354234 GCTAAGCTTAGTTCAAAGGTATGCA 59.646 40.000 29.42 0.00 36.22 3.96
3586 4098 5.586643 AGCTAAGCTTAGTTCAAAGGTATGC 59.413 40.000 29.42 14.50 33.89 3.14
3602 4114 4.473559 TGTATTAGGGGACAAAGCTAAGCT 59.526 41.667 0.00 0.00 42.56 3.74
3603 4115 4.777463 TGTATTAGGGGACAAAGCTAAGC 58.223 43.478 0.00 0.00 0.00 3.09
3604 4116 5.293569 CGTTGTATTAGGGGACAAAGCTAAG 59.706 44.000 0.00 0.00 37.31 2.18
3605 4117 5.180271 CGTTGTATTAGGGGACAAAGCTAA 58.820 41.667 0.00 0.00 37.31 3.09
3606 4118 4.383335 CCGTTGTATTAGGGGACAAAGCTA 60.383 45.833 0.00 0.00 37.31 3.32
3607 4119 3.606687 CGTTGTATTAGGGGACAAAGCT 58.393 45.455 0.00 0.00 37.31 3.74
3608 4120 2.681344 CCGTTGTATTAGGGGACAAAGC 59.319 50.000 0.00 0.00 37.31 3.51
3609 4121 2.681344 GCCGTTGTATTAGGGGACAAAG 59.319 50.000 0.00 0.00 37.31 2.77
3610 4122 2.040012 TGCCGTTGTATTAGGGGACAAA 59.960 45.455 0.00 0.00 37.31 2.83
3611 4123 1.629353 TGCCGTTGTATTAGGGGACAA 59.371 47.619 0.00 0.00 33.23 3.18
3612 4124 1.065998 GTGCCGTTGTATTAGGGGACA 60.066 52.381 0.00 0.00 42.02 4.02
3613 4125 1.660167 GTGCCGTTGTATTAGGGGAC 58.340 55.000 0.00 0.00 37.27 4.46
3614 4126 0.542805 GGTGCCGTTGTATTAGGGGA 59.457 55.000 0.00 0.00 0.00 4.81
3615 4127 0.812412 CGGTGCCGTTGTATTAGGGG 60.812 60.000 1.93 0.00 34.35 4.79
3616 4128 0.176219 TCGGTGCCGTTGTATTAGGG 59.824 55.000 10.60 0.00 40.74 3.53
3617 4129 1.134907 ACTCGGTGCCGTTGTATTAGG 60.135 52.381 10.60 0.00 40.74 2.69
3618 4130 1.924524 CACTCGGTGCCGTTGTATTAG 59.075 52.381 10.60 1.45 40.74 1.73
3619 4131 1.545136 TCACTCGGTGCCGTTGTATTA 59.455 47.619 10.60 0.00 40.74 0.98
3620 4132 0.319083 TCACTCGGTGCCGTTGTATT 59.681 50.000 10.60 0.00 40.74 1.89
3621 4133 0.319083 TTCACTCGGTGCCGTTGTAT 59.681 50.000 10.60 0.00 40.74 2.29
3622 4134 0.319083 ATTCACTCGGTGCCGTTGTA 59.681 50.000 10.60 4.08 40.74 2.41
3623 4135 1.070786 ATTCACTCGGTGCCGTTGT 59.929 52.632 10.60 8.12 40.74 3.32
3624 4136 1.227999 ACATTCACTCGGTGCCGTTG 61.228 55.000 10.60 9.15 40.74 4.10
3625 4137 0.949105 GACATTCACTCGGTGCCGTT 60.949 55.000 10.60 0.00 40.74 4.44
3626 4138 1.374252 GACATTCACTCGGTGCCGT 60.374 57.895 10.60 0.00 40.74 5.68
3627 4139 2.100631 GGACATTCACTCGGTGCCG 61.101 63.158 3.94 3.94 41.35 5.69
3628 4140 1.021390 CAGGACATTCACTCGGTGCC 61.021 60.000 0.00 0.00 32.98 5.01
3629 4141 1.639298 GCAGGACATTCACTCGGTGC 61.639 60.000 0.00 0.00 32.98 5.01
3630 4142 1.021390 GGCAGGACATTCACTCGGTG 61.021 60.000 0.00 0.00 34.45 4.94
3631 4143 1.194781 AGGCAGGACATTCACTCGGT 61.195 55.000 0.00 0.00 0.00 4.69
3632 4144 0.460987 GAGGCAGGACATTCACTCGG 60.461 60.000 0.00 0.00 0.00 4.63
3633 4145 0.534412 AGAGGCAGGACATTCACTCG 59.466 55.000 0.00 0.00 0.00 4.18
3634 4146 2.011046 GCAGAGGCAGGACATTCACTC 61.011 57.143 0.00 0.00 40.72 3.51
3635 4147 0.035630 GCAGAGGCAGGACATTCACT 60.036 55.000 0.00 0.00 40.72 3.41
3636 4148 2.475666 GCAGAGGCAGGACATTCAC 58.524 57.895 0.00 0.00 40.72 3.18
3654 4166 7.449827 GTGTTCATTGTTTGCATCATGTTATG 58.550 34.615 0.00 0.00 0.00 1.90
3655 4167 6.308524 CGTGTTCATTGTTTGCATCATGTTAT 59.691 34.615 0.00 0.00 0.00 1.89
3656 4168 5.628606 CGTGTTCATTGTTTGCATCATGTTA 59.371 36.000 0.00 0.00 0.00 2.41
3657 4169 4.445052 CGTGTTCATTGTTTGCATCATGTT 59.555 37.500 0.00 0.00 0.00 2.71
3658 4170 3.982701 CGTGTTCATTGTTTGCATCATGT 59.017 39.130 0.00 0.00 0.00 3.21
3659 4171 3.982701 ACGTGTTCATTGTTTGCATCATG 59.017 39.130 0.00 0.00 0.00 3.07
3660 4172 4.241590 ACGTGTTCATTGTTTGCATCAT 57.758 36.364 0.00 0.00 0.00 2.45
3661 4173 3.706802 ACGTGTTCATTGTTTGCATCA 57.293 38.095 0.00 0.00 0.00 3.07
3662 4174 3.425193 GGAACGTGTTCATTGTTTGCATC 59.575 43.478 14.16 0.00 41.20 3.91
3663 4175 3.181482 TGGAACGTGTTCATTGTTTGCAT 60.181 39.130 14.16 0.00 41.20 3.96
3664 4176 2.164422 TGGAACGTGTTCATTGTTTGCA 59.836 40.909 14.16 0.00 41.20 4.08
3665 4177 2.533942 GTGGAACGTGTTCATTGTTTGC 59.466 45.455 14.16 0.00 41.20 3.68
3666 4178 3.545873 GTGTGGAACGTGTTCATTGTTTG 59.454 43.478 14.16 0.00 42.39 2.93
3667 4179 3.765026 GTGTGGAACGTGTTCATTGTTT 58.235 40.909 14.16 0.00 42.39 2.83
3668 4180 3.414549 GTGTGGAACGTGTTCATTGTT 57.585 42.857 14.16 0.00 42.39 2.83
3680 4192 2.557317 TCTCTTTTGGTCGTGTGGAAC 58.443 47.619 0.00 0.00 37.35 3.62
3681 4193 2.992124 TCTCTTTTGGTCGTGTGGAA 57.008 45.000 0.00 0.00 0.00 3.53
3682 4194 2.992124 TTCTCTTTTGGTCGTGTGGA 57.008 45.000 0.00 0.00 0.00 4.02
3683 4195 5.880054 ATATTTCTCTTTTGGTCGTGTGG 57.120 39.130 0.00 0.00 0.00 4.17
3684 4196 9.840427 AAATAATATTTCTCTTTTGGTCGTGTG 57.160 29.630 0.00 0.00 0.00 3.82
3714 4226 9.449719 CCAACATCCTTTGTAGAAGTAATTACT 57.550 33.333 12.50 12.50 37.68 2.24
3715 4227 9.444600 TCCAACATCCTTTGTAGAAGTAATTAC 57.555 33.333 7.57 7.57 37.68 1.89
3716 4228 9.667107 CTCCAACATCCTTTGTAGAAGTAATTA 57.333 33.333 0.00 0.00 37.68 1.40
3717 4229 8.164070 ACTCCAACATCCTTTGTAGAAGTAATT 58.836 33.333 0.00 0.00 37.68 1.40
3718 4230 7.690256 ACTCCAACATCCTTTGTAGAAGTAAT 58.310 34.615 0.00 0.00 37.68 1.89
3719 4231 7.074653 ACTCCAACATCCTTTGTAGAAGTAA 57.925 36.000 0.00 0.00 37.68 2.24
3720 4232 6.681729 ACTCCAACATCCTTTGTAGAAGTA 57.318 37.500 0.00 0.00 37.68 2.24
3721 4233 5.568620 ACTCCAACATCCTTTGTAGAAGT 57.431 39.130 0.00 0.00 37.68 3.01
3722 4234 5.875359 GGTACTCCAACATCCTTTGTAGAAG 59.125 44.000 0.00 0.00 37.68 2.85
3723 4235 5.308497 TGGTACTCCAACATCCTTTGTAGAA 59.692 40.000 0.00 0.00 41.25 2.10
3724 4236 4.841813 TGGTACTCCAACATCCTTTGTAGA 59.158 41.667 0.00 0.00 41.25 2.59
3725 4237 5.160607 TGGTACTCCAACATCCTTTGTAG 57.839 43.478 0.00 0.00 41.25 2.74
3726 4238 4.564821 GCTGGTACTCCAACATCCTTTGTA 60.565 45.833 0.00 0.00 43.81 2.41
3727 4239 3.810743 GCTGGTACTCCAACATCCTTTGT 60.811 47.826 0.00 0.00 43.81 2.83
3728 4240 2.749621 GCTGGTACTCCAACATCCTTTG 59.250 50.000 0.00 0.00 43.81 2.77
3729 4241 2.290960 GGCTGGTACTCCAACATCCTTT 60.291 50.000 0.00 0.00 43.81 3.11
3730 4242 1.282157 GGCTGGTACTCCAACATCCTT 59.718 52.381 0.00 0.00 43.81 3.36
3731 4243 0.912486 GGCTGGTACTCCAACATCCT 59.088 55.000 0.00 0.00 43.81 3.24
3732 4244 0.912486 AGGCTGGTACTCCAACATCC 59.088 55.000 0.00 0.00 43.81 3.51
3733 4245 2.317530 GAGGCTGGTACTCCAACATC 57.682 55.000 0.00 0.00 43.81 3.06
3740 4252 0.250513 CACCAAGGAGGCTGGTACTC 59.749 60.000 0.00 0.00 45.67 2.59
3741 4253 1.842381 GCACCAAGGAGGCTGGTACT 61.842 60.000 0.00 0.00 45.67 2.73
3742 4254 1.377333 GCACCAAGGAGGCTGGTAC 60.377 63.158 0.00 0.00 45.67 3.34
3743 4255 2.602676 GGCACCAAGGAGGCTGGTA 61.603 63.158 0.00 0.00 45.67 3.25
3745 4257 3.635268 GAGGCACCAAGGAGGCTGG 62.635 68.421 16.72 0.00 41.09 4.85
3746 4258 2.045536 GAGGCACCAAGGAGGCTG 60.046 66.667 16.72 0.00 41.09 4.85
3747 4259 3.334054 GGAGGCACCAAGGAGGCT 61.334 66.667 12.15 12.15 43.34 4.58
3748 4260 4.785453 CGGAGGCACCAAGGAGGC 62.785 72.222 0.94 1.88 43.14 4.70
3749 4261 4.785453 GCGGAGGCACCAAGGAGG 62.785 72.222 0.94 0.00 45.67 4.30
3773 4285 2.508586 GAACGGTGCAGAGGACCTCC 62.509 65.000 18.32 4.32 0.00 4.30
3774 4286 1.079750 GAACGGTGCAGAGGACCTC 60.080 63.158 14.15 14.15 0.00 3.85
3775 4287 2.932234 CGAACGGTGCAGAGGACCT 61.932 63.158 6.15 0.00 0.00 3.85
3776 4288 2.432628 CGAACGGTGCAGAGGACC 60.433 66.667 0.00 0.00 0.00 4.46
3777 4289 0.038892 TAACGAACGGTGCAGAGGAC 60.039 55.000 0.00 0.00 0.00 3.85
3778 4290 0.242825 CTAACGAACGGTGCAGAGGA 59.757 55.000 0.00 0.00 0.00 3.71
3779 4291 0.736325 CCTAACGAACGGTGCAGAGG 60.736 60.000 0.00 0.00 0.00 3.69
3780 4292 1.352156 GCCTAACGAACGGTGCAGAG 61.352 60.000 0.00 0.00 0.00 3.35
3781 4293 1.373748 GCCTAACGAACGGTGCAGA 60.374 57.895 0.00 0.00 0.00 4.26
3782 4294 3.165498 GCCTAACGAACGGTGCAG 58.835 61.111 0.00 0.00 0.00 4.41
3814 4326 0.620700 TAGAGCCCCAGGGAAGAACC 60.621 60.000 7.25 0.00 37.50 3.62
3815 4327 1.141858 CATAGAGCCCCAGGGAAGAAC 59.858 57.143 7.25 0.00 37.50 3.01
3816 4328 1.511613 CATAGAGCCCCAGGGAAGAA 58.488 55.000 7.25 0.00 37.50 2.52
3817 4329 1.056700 GCATAGAGCCCCAGGGAAGA 61.057 60.000 7.25 0.00 37.50 2.87
3818 4330 1.453669 GCATAGAGCCCCAGGGAAG 59.546 63.158 7.25 0.00 37.50 3.46
3819 4331 2.443394 CGCATAGAGCCCCAGGGAA 61.443 63.158 7.25 0.00 41.38 3.97
3820 4332 2.844362 CGCATAGAGCCCCAGGGA 60.844 66.667 7.25 0.00 41.38 4.20
3821 4333 2.746375 AACGCATAGAGCCCCAGGG 61.746 63.158 0.00 0.00 41.38 4.45
3822 4334 1.524621 CAACGCATAGAGCCCCAGG 60.525 63.158 0.00 0.00 41.38 4.45
3823 4335 0.392998 AACAACGCATAGAGCCCCAG 60.393 55.000 0.00 0.00 41.38 4.45
3824 4336 0.392461 GAACAACGCATAGAGCCCCA 60.392 55.000 0.00 0.00 41.38 4.96
3825 4337 1.429148 CGAACAACGCATAGAGCCCC 61.429 60.000 0.00 0.00 41.38 5.80
3826 4338 0.459585 TCGAACAACGCATAGAGCCC 60.460 55.000 0.00 0.00 41.38 5.19
3827 4339 1.523095 GATCGAACAACGCATAGAGCC 59.477 52.381 0.00 0.00 41.38 4.70
3828 4340 2.464865 AGATCGAACAACGCATAGAGC 58.535 47.619 0.00 0.00 42.26 4.09
3829 4341 3.975670 GGTAGATCGAACAACGCATAGAG 59.024 47.826 0.00 0.00 42.26 2.43
3830 4342 3.243301 GGGTAGATCGAACAACGCATAGA 60.243 47.826 0.00 0.00 42.26 1.98
3831 4343 3.050619 GGGTAGATCGAACAACGCATAG 58.949 50.000 0.00 0.00 42.26 2.23
3832 4344 2.542205 CGGGTAGATCGAACAACGCATA 60.542 50.000 0.00 0.00 42.26 3.14
3833 4345 1.801395 CGGGTAGATCGAACAACGCAT 60.801 52.381 0.00 0.00 42.26 4.73
3834 4346 0.457166 CGGGTAGATCGAACAACGCA 60.457 55.000 0.00 0.00 42.26 5.24
3835 4347 1.143969 CCGGGTAGATCGAACAACGC 61.144 60.000 0.00 0.00 42.26 4.84
3836 4348 0.452987 TCCGGGTAGATCGAACAACG 59.547 55.000 0.00 2.63 44.09 4.10
3837 4349 1.796617 CGTCCGGGTAGATCGAACAAC 60.797 57.143 0.00 0.00 0.00 3.32
3838 4350 0.452987 CGTCCGGGTAGATCGAACAA 59.547 55.000 0.00 0.00 0.00 2.83
3839 4351 1.378882 CCGTCCGGGTAGATCGAACA 61.379 60.000 0.00 0.00 0.00 3.18
3840 4352 1.358046 CCGTCCGGGTAGATCGAAC 59.642 63.158 0.00 0.00 0.00 3.95
3841 4353 2.484062 GCCGTCCGGGTAGATCGAA 61.484 63.158 7.97 0.00 38.44 3.71
3842 4354 2.903855 GCCGTCCGGGTAGATCGA 60.904 66.667 7.97 0.00 38.44 3.59
3843 4355 2.905880 AGCCGTCCGGGTAGATCG 60.906 66.667 8.93 0.00 45.11 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.