Multiple sequence alignment - TraesCS5D01G338000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G338000 chr5D 100.000 3145 0 0 1 3145 426459108 426455964 0.000000e+00 5808.0
1 TraesCS5D01G338000 chr5D 92.466 292 20 2 2855 3145 170529760 170530050 1.740000e-112 416.0
2 TraesCS5D01G338000 chr5D 92.440 291 21 1 2856 3145 370460107 370460397 6.280000e-112 414.0
3 TraesCS5D01G338000 chr5D 92.414 290 20 2 2857 3145 291353905 291354193 2.260000e-111 412.0
4 TraesCS5D01G338000 chr5B 86.741 2338 125 79 170 2446 516465252 516463039 0.000000e+00 2429.0
5 TraesCS5D01G338000 chr5B 87.847 288 14 10 2499 2765 516462885 516462598 5.060000e-83 318.0
6 TraesCS5D01G338000 chr5B 94.340 53 3 0 58 110 43156591 43156539 7.230000e-12 82.4
7 TraesCS5D01G338000 chr5B 94.340 53 3 0 55 107 458398243 458398295 7.230000e-12 82.4
8 TraesCS5D01G338000 chr5A 87.436 1568 92 49 925 2444 540594903 540593393 0.000000e+00 1707.0
9 TraesCS5D01G338000 chr5A 86.158 708 55 24 107 783 540596020 540595325 0.000000e+00 725.0
10 TraesCS5D01G338000 chr5A 85.816 282 20 11 2501 2768 540593155 540592880 6.640000e-72 281.0
11 TraesCS5D01G338000 chr7D 93.403 288 17 2 2859 3145 125724379 125724665 2.900000e-115 425.0
12 TraesCS5D01G338000 chr7D 92.708 288 20 1 2859 3145 435523782 435524069 6.280000e-112 414.0
13 TraesCS5D01G338000 chr2D 93.080 289 17 3 2858 3145 398457748 398458034 1.350000e-113 420.0
14 TraesCS5D01G338000 chr2D 91.753 291 23 1 2856 3145 502523402 502523692 1.360000e-108 403.0
15 TraesCS5D01G338000 chr2D 96.296 54 2 0 55 108 28324927 28324980 4.320000e-14 89.8
16 TraesCS5D01G338000 chr2D 98.000 50 1 0 55 104 441833860 441833909 1.550000e-13 87.9
17 TraesCS5D01G338000 chr2D 96.078 51 2 0 57 107 600068628 600068678 2.010000e-12 84.2
18 TraesCS5D01G338000 chr3A 91.919 297 22 2 2850 3145 621336331 621336036 6.280000e-112 414.0
19 TraesCS5D01G338000 chr6A 92.414 290 21 1 2857 3145 60082388 60082677 2.260000e-111 412.0
20 TraesCS5D01G338000 chr7B 86.667 105 11 3 1 103 1096819 1096716 2.560000e-21 113.0
21 TraesCS5D01G338000 chr1D 96.226 53 2 0 55 107 10415162 10415214 1.550000e-13 87.9
22 TraesCS5D01G338000 chr1D 96.000 50 2 0 55 104 375980860 375980909 7.230000e-12 82.4
23 TraesCS5D01G338000 chr7A 94.444 54 3 0 55 108 488161949 488162002 2.010000e-12 84.2
24 TraesCS5D01G338000 chr1A 91.111 45 4 0 1390 1434 466897345 466897389 9.420000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G338000 chr5D 426455964 426459108 3144 True 5808.000000 5808 100.000 1 3145 1 chr5D.!!$R1 3144
1 TraesCS5D01G338000 chr5B 516462598 516465252 2654 True 1373.500000 2429 87.294 170 2765 2 chr5B.!!$R2 2595
2 TraesCS5D01G338000 chr5A 540592880 540596020 3140 True 904.333333 1707 86.470 107 2768 3 chr5A.!!$R1 2661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 279 0.032403 TATCGCGAATAACCCACGGG 59.968 55.0 15.24 0.0 40.33 5.28 F
769 805 0.177604 CTGATGAGTGAGGAGGGTGC 59.822 60.0 0.00 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 2187 0.249238 ATCGTAGTAGCAGCAGCAGC 60.249 55.0 3.17 0.46 45.49 5.25 R
2494 3060 0.108329 CGGGATCGTTGGTTGTAGCT 60.108 55.0 0.00 0.00 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.821991 CCTTCGGGCTCAATACCTAG 57.178 55.000 0.00 0.00 0.00 3.02
31 32 1.344763 CCTTCGGGCTCAATACCTAGG 59.655 57.143 7.41 7.41 0.00 3.02
32 33 0.756903 TTCGGGCTCAATACCTAGGC 59.243 55.000 9.30 0.00 37.55 3.93
34 35 1.371558 GGGCTCAATACCTAGGCCG 59.628 63.158 9.30 0.00 46.95 6.13
35 36 1.119574 GGGCTCAATACCTAGGCCGA 61.120 60.000 9.30 0.00 46.95 5.54
36 37 0.318762 GGCTCAATACCTAGGCCGAG 59.681 60.000 9.30 5.78 33.30 4.63
37 38 0.318762 GCTCAATACCTAGGCCGAGG 59.681 60.000 28.76 28.76 42.89 4.63
38 39 0.318762 CTCAATACCTAGGCCGAGGC 59.681 60.000 30.10 5.37 40.65 4.70
49 50 4.559063 CCGAGGCCTGCCATGAGG 62.559 72.222 12.00 4.06 38.92 3.86
50 51 3.473647 CGAGGCCTGCCATGAGGA 61.474 66.667 12.00 0.00 38.92 3.71
51 52 2.509916 GAGGCCTGCCATGAGGAG 59.490 66.667 12.00 0.62 38.92 3.69
52 53 3.771110 GAGGCCTGCCATGAGGAGC 62.771 68.421 12.00 0.00 38.92 4.70
53 54 4.119363 GGCCTGCCATGAGGAGCA 62.119 66.667 2.58 0.00 34.69 4.26
54 55 2.195139 GCCTGCCATGAGGAGCAT 59.805 61.111 4.64 0.00 38.56 3.79
55 56 1.897615 GCCTGCCATGAGGAGCATC 60.898 63.158 4.64 0.00 38.56 3.91
56 57 1.597302 CCTGCCATGAGGAGCATCG 60.597 63.158 0.00 0.00 38.56 3.84
57 58 1.597302 CTGCCATGAGGAGCATCGG 60.597 63.158 0.00 0.00 38.56 4.18
58 59 2.281345 GCCATGAGGAGCATCGGG 60.281 66.667 0.00 0.00 34.15 5.14
59 60 2.281345 CCATGAGGAGCATCGGGC 60.281 66.667 0.00 0.00 45.30 6.13
60 61 2.281345 CATGAGGAGCATCGGGCC 60.281 66.667 0.00 0.00 46.50 5.80
61 62 3.933722 ATGAGGAGCATCGGGCCG 61.934 66.667 22.51 22.51 46.50 6.13
102 103 4.828296 GGGCTGCCCATGACCAGG 62.828 72.222 32.46 0.00 44.65 4.45
103 104 4.052518 GGCTGCCCATGACCAGGT 62.053 66.667 7.66 0.00 0.00 4.00
104 105 2.679342 GGCTGCCCATGACCAGGTA 61.679 63.158 7.66 0.00 0.00 3.08
105 106 1.533711 GCTGCCCATGACCAGGTAT 59.466 57.895 12.52 0.00 0.00 2.73
119 120 1.200252 CAGGTATATCTGGACGGCTCG 59.800 57.143 4.97 0.00 0.00 5.03
142 143 1.454847 TGACCGGCCAAAGCTTTGT 60.455 52.632 31.67 17.05 39.73 2.83
189 190 1.003476 GGCGTTTTCCTTACCCGGA 60.003 57.895 0.73 0.00 0.00 5.14
239 240 1.524849 TGCACTGCCACGCACTTAA 60.525 52.632 0.00 0.00 33.79 1.85
260 261 8.800332 ACTTAAGATCCGTTTACAGAAGAAGTA 58.200 33.333 10.09 0.00 0.00 2.24
278 279 0.032403 TATCGCGAATAACCCACGGG 59.968 55.000 15.24 0.00 40.33 5.28
331 340 3.129871 GTGAATCTAGGTGATGAGCAGC 58.870 50.000 0.00 0.00 45.24 5.25
336 345 2.124403 GGTGATGAGCAGCAGGGG 60.124 66.667 0.00 0.00 44.31 4.79
337 346 2.673200 GGTGATGAGCAGCAGGGGA 61.673 63.158 0.00 0.00 44.31 4.81
338 347 1.153208 GTGATGAGCAGCAGGGGAG 60.153 63.158 0.00 0.00 0.00 4.30
339 348 1.306397 TGATGAGCAGCAGGGGAGA 60.306 57.895 0.00 0.00 0.00 3.71
340 349 1.335882 TGATGAGCAGCAGGGGAGAG 61.336 60.000 0.00 0.00 0.00 3.20
341 350 1.002662 ATGAGCAGCAGGGGAGAGA 59.997 57.895 0.00 0.00 0.00 3.10
463 473 4.943591 GCACACACGCACGCACAG 62.944 66.667 0.00 0.00 0.00 3.66
763 799 0.813821 CGCTGTCTGATGAGTGAGGA 59.186 55.000 0.00 0.00 0.00 3.71
767 803 1.077828 TGTCTGATGAGTGAGGAGGGT 59.922 52.381 0.00 0.00 0.00 4.34
769 805 0.177604 CTGATGAGTGAGGAGGGTGC 59.822 60.000 0.00 0.00 0.00 5.01
771 807 2.303549 GATGAGTGAGGAGGGTGCGG 62.304 65.000 0.00 0.00 0.00 5.69
919 973 1.410882 GAGCGATAGATAGGGGCCATC 59.589 57.143 4.39 0.00 39.76 3.51
920 974 0.466124 GCGATAGATAGGGGCCATCC 59.534 60.000 4.39 0.00 39.76 3.51
921 975 1.967274 GCGATAGATAGGGGCCATCCT 60.967 57.143 4.39 5.23 38.69 3.24
922 976 2.690026 GCGATAGATAGGGGCCATCCTA 60.690 54.545 4.39 7.78 42.91 2.94
967 1286 2.794910 CCAAGCAAGATACATACGGACG 59.205 50.000 0.00 0.00 0.00 4.79
1125 1447 4.335647 AGCCTCAACACCCGCCTG 62.336 66.667 0.00 0.00 0.00 4.85
1260 1585 1.435515 CTCCTTCTTCTCCTCCGCG 59.564 63.158 0.00 0.00 0.00 6.46
1531 1874 1.134560 GCCTCAAGTACGACCAGGTAG 59.865 57.143 0.00 0.00 0.00 3.18
1535 1878 0.893447 AAGTACGACCAGGTAGGCAC 59.107 55.000 4.53 2.00 43.14 5.01
1536 1879 0.969409 AGTACGACCAGGTAGGCACC 60.969 60.000 4.53 0.00 46.19 5.01
1556 1899 2.439156 GCCGCCAGCATCCTCTTT 60.439 61.111 0.00 0.00 42.97 2.52
1557 1900 2.476320 GCCGCCAGCATCCTCTTTC 61.476 63.158 0.00 0.00 42.97 2.62
1558 1901 1.222936 CCGCCAGCATCCTCTTTCT 59.777 57.895 0.00 0.00 0.00 2.52
1560 1903 1.457346 CGCCAGCATCCTCTTTCTTT 58.543 50.000 0.00 0.00 0.00 2.52
1561 1904 1.815003 CGCCAGCATCCTCTTTCTTTT 59.185 47.619 0.00 0.00 0.00 2.27
1562 1905 2.159462 CGCCAGCATCCTCTTTCTTTTC 60.159 50.000 0.00 0.00 0.00 2.29
1563 1906 3.087781 GCCAGCATCCTCTTTCTTTTCT 58.912 45.455 0.00 0.00 0.00 2.52
1564 1907 3.509184 GCCAGCATCCTCTTTCTTTTCTT 59.491 43.478 0.00 0.00 0.00 2.52
1565 1908 4.021632 GCCAGCATCCTCTTTCTTTTCTTT 60.022 41.667 0.00 0.00 0.00 2.52
1566 1909 5.510349 GCCAGCATCCTCTTTCTTTTCTTTT 60.510 40.000 0.00 0.00 0.00 2.27
1567 1910 6.155136 CCAGCATCCTCTTTCTTTTCTTTTC 58.845 40.000 0.00 0.00 0.00 2.29
1570 1913 7.924947 CAGCATCCTCTTTCTTTTCTTTTCTTT 59.075 33.333 0.00 0.00 0.00 2.52
1571 1914 8.481314 AGCATCCTCTTTCTTTTCTTTTCTTTT 58.519 29.630 0.00 0.00 0.00 2.27
1572 1915 8.759641 GCATCCTCTTTCTTTTCTTTTCTTTTC 58.240 33.333 0.00 0.00 0.00 2.29
1575 1918 9.860898 TCCTCTTTCTTTTCTTTTCTTTTCTTG 57.139 29.630 0.00 0.00 0.00 3.02
1576 1919 9.091784 CCTCTTTCTTTTCTTTTCTTTTCTTGG 57.908 33.333 0.00 0.00 0.00 3.61
1578 1921 8.811994 TCTTTCTTTTCTTTTCTTTTCTTGGGA 58.188 29.630 0.00 0.00 0.00 4.37
1579 1922 9.091784 CTTTCTTTTCTTTTCTTTTCTTGGGAG 57.908 33.333 0.00 0.00 0.00 4.30
1581 1924 5.930837 TTTCTTTTCTTTTCTTGGGAGCA 57.069 34.783 0.00 0.00 0.00 4.26
1582 1925 5.930837 TTCTTTTCTTTTCTTGGGAGCAA 57.069 34.783 0.00 0.00 0.00 3.91
1583 1926 5.520376 TCTTTTCTTTTCTTGGGAGCAAG 57.480 39.130 0.00 0.00 0.00 4.01
1584 1927 3.733443 TTTCTTTTCTTGGGAGCAAGC 57.267 42.857 0.00 0.00 32.52 4.01
1585 1928 2.664402 TCTTTTCTTGGGAGCAAGCT 57.336 45.000 0.00 0.00 32.52 3.74
1586 1929 2.233271 TCTTTTCTTGGGAGCAAGCTG 58.767 47.619 0.00 0.00 32.52 4.24
1587 1930 2.158623 TCTTTTCTTGGGAGCAAGCTGA 60.159 45.455 0.00 0.00 32.52 4.26
1588 1931 1.609208 TTTCTTGGGAGCAAGCTGAC 58.391 50.000 0.00 0.00 32.52 3.51
1591 1934 1.004560 TTGGGAGCAAGCTGACTCG 60.005 57.895 0.00 0.00 33.55 4.18
1592 1935 1.758440 TTGGGAGCAAGCTGACTCGT 61.758 55.000 0.00 0.00 33.55 4.18
1593 1936 1.446966 GGGAGCAAGCTGACTCGTC 60.447 63.158 0.00 2.56 33.55 4.20
1595 1938 1.290324 GAGCAAGCTGACTCGTCCA 59.710 57.895 0.00 0.00 0.00 4.02
1597 1940 1.005630 GCAAGCTGACTCGTCCACT 60.006 57.895 0.00 0.00 0.00 4.00
1599 1942 1.423395 CAAGCTGACTCGTCCACTTC 58.577 55.000 0.00 0.00 0.00 3.01
1600 1943 1.000283 CAAGCTGACTCGTCCACTTCT 60.000 52.381 0.00 0.00 0.00 2.85
1601 1944 0.885196 AGCTGACTCGTCCACTTCTC 59.115 55.000 0.00 0.00 0.00 2.87
1602 1945 0.885196 GCTGACTCGTCCACTTCTCT 59.115 55.000 0.00 0.00 0.00 3.10
1603 1946 1.135517 GCTGACTCGTCCACTTCTCTC 60.136 57.143 0.00 0.00 0.00 3.20
1604 1947 1.470890 CTGACTCGTCCACTTCTCTCC 59.529 57.143 0.00 0.00 0.00 3.71
1605 1948 1.074084 TGACTCGTCCACTTCTCTCCT 59.926 52.381 0.00 0.00 0.00 3.69
1606 1949 1.741145 GACTCGTCCACTTCTCTCCTC 59.259 57.143 0.00 0.00 0.00 3.71
1607 1950 1.099689 CTCGTCCACTTCTCTCCTCC 58.900 60.000 0.00 0.00 0.00 4.30
1608 1951 0.404426 TCGTCCACTTCTCTCCTCCA 59.596 55.000 0.00 0.00 0.00 3.86
1609 1952 0.528470 CGTCCACTTCTCTCCTCCAC 59.472 60.000 0.00 0.00 0.00 4.02
1712 2061 2.759973 TCGGCGCCCTTCTGATCT 60.760 61.111 23.46 0.00 0.00 2.75
1763 2116 3.065306 CTCCTACAACCACCGCCA 58.935 61.111 0.00 0.00 0.00 5.69
1764 2117 1.079127 CTCCTACAACCACCGCCAG 60.079 63.158 0.00 0.00 0.00 4.85
1801 2160 2.175202 AGAGTGTTGCAGTAGCTAGCT 58.825 47.619 23.12 23.12 42.74 3.32
1821 2180 9.223099 GCTAGCTCTTACTAGTAACTATTAGCT 57.777 37.037 22.27 22.27 41.49 3.32
1825 2184 7.806014 GCTCTTACTAGTAACTATTAGCTGCTG 59.194 40.741 13.43 0.00 0.00 4.41
1826 2185 7.649973 TCTTACTAGTAACTATTAGCTGCTGC 58.350 38.462 13.43 7.62 40.05 5.25
1849 2208 0.528466 TGCTGCTGCTACTACGATGC 60.528 55.000 17.00 0.00 40.48 3.91
1903 2262 8.697507 ATGGATGGTATTATGTTCTCCTTTTC 57.302 34.615 0.00 0.00 0.00 2.29
1905 2264 7.091993 TGGATGGTATTATGTTCTCCTTTTCCT 60.092 37.037 0.00 0.00 0.00 3.36
1907 2266 7.938140 TGGTATTATGTTCTCCTTTTCCTTG 57.062 36.000 0.00 0.00 0.00 3.61
1908 2267 7.695055 TGGTATTATGTTCTCCTTTTCCTTGA 58.305 34.615 0.00 0.00 0.00 3.02
1944 2303 1.344763 CCGGGGCTATCTCGATCTTTT 59.655 52.381 0.00 0.00 0.00 2.27
2116 2475 2.860136 GTTCTTGTTTTGCTGACTTGGC 59.140 45.455 0.00 0.00 0.00 4.52
2141 2500 8.543774 GCGATTAATGATATTATGGTGCTACTC 58.456 37.037 0.00 0.00 0.00 2.59
2142 2501 9.035607 CGATTAATGATATTATGGTGCTACTCC 57.964 37.037 0.00 0.00 0.00 3.85
2147 2506 8.671987 ATGATATTATGGTGCTACTCCTACTT 57.328 34.615 0.00 0.00 0.00 2.24
2148 2507 9.769677 ATGATATTATGGTGCTACTCCTACTTA 57.230 33.333 0.00 0.00 0.00 2.24
2160 2521 8.712103 TGCTACTCCTACTTATCAGTTCTAGTA 58.288 37.037 0.00 0.00 34.06 1.82
2161 2522 9.211485 GCTACTCCTACTTATCAGTTCTAGTAG 57.789 40.741 13.09 13.09 38.57 2.57
2202 2563 9.740239 TTACTGTTATTAGTTACCGTGATGATC 57.260 33.333 0.00 0.00 32.19 2.92
2207 2568 8.916654 GTTATTAGTTACCGTGATGATCTGATG 58.083 37.037 0.00 0.00 0.00 3.07
2243 2614 2.131709 CGCGTGGGAGGGATTAGGA 61.132 63.158 0.00 0.00 0.00 2.94
2244 2615 1.472662 CGCGTGGGAGGGATTAGGAT 61.473 60.000 0.00 0.00 0.00 3.24
2245 2616 0.765510 GCGTGGGAGGGATTAGGATT 59.234 55.000 0.00 0.00 0.00 3.01
2246 2617 1.975680 GCGTGGGAGGGATTAGGATTA 59.024 52.381 0.00 0.00 0.00 1.75
2247 2618 2.028020 GCGTGGGAGGGATTAGGATTAG 60.028 54.545 0.00 0.00 0.00 1.73
2248 2619 2.567615 CGTGGGAGGGATTAGGATTAGG 59.432 54.545 0.00 0.00 0.00 2.69
2249 2620 2.306219 GTGGGAGGGATTAGGATTAGGC 59.694 54.545 0.00 0.00 0.00 3.93
2250 2621 1.555533 GGGAGGGATTAGGATTAGGCG 59.444 57.143 0.00 0.00 0.00 5.52
2251 2622 1.555533 GGAGGGATTAGGATTAGGCGG 59.444 57.143 0.00 0.00 0.00 6.13
2252 2623 1.555533 GAGGGATTAGGATTAGGCGGG 59.444 57.143 0.00 0.00 0.00 6.13
2271 2642 2.970639 CAGAAAGGGAGGCGACGA 59.029 61.111 0.00 0.00 0.00 4.20
2273 2644 1.906824 AGAAAGGGAGGCGACGACA 60.907 57.895 2.19 0.00 0.00 4.35
2284 2655 3.515286 GACGACATCGGCGAGGGA 61.515 66.667 25.96 0.00 44.95 4.20
2319 2690 3.306225 CCTGCACAAATGTGGCAACTATT 60.306 43.478 14.85 0.00 45.72 1.73
2387 2758 3.399181 GCCGACCTCATCCCCACA 61.399 66.667 0.00 0.00 0.00 4.17
2452 2873 2.155665 CGACGGCGTGGTACAAATT 58.844 52.632 21.19 0.00 44.16 1.82
2457 2878 1.399215 CGGCGTGGTACAAATTGACAC 60.399 52.381 0.00 5.20 44.16 3.67
2463 2884 4.748102 CGTGGTACAAATTGACACTGTAGT 59.252 41.667 0.00 0.00 44.16 2.73
2465 2886 6.129009 CGTGGTACAAATTGACACTGTAGTAC 60.129 42.308 0.00 0.00 44.16 2.73
2467 3033 6.926826 TGGTACAAATTGACACTGTAGTACTG 59.073 38.462 5.39 5.69 31.92 2.74
2486 3052 8.493787 AGTACTGTATTTTATAGAAGGGAGGG 57.506 38.462 0.00 0.00 0.00 4.30
2489 3055 6.559157 ACTGTATTTTATAGAAGGGAGGGAGG 59.441 42.308 0.00 0.00 0.00 4.30
2492 3058 3.925261 TTATAGAAGGGAGGGAGGAGG 57.075 52.381 0.00 0.00 0.00 4.30
2494 3060 0.254638 TAGAAGGGAGGGAGGAGGGA 60.255 60.000 0.00 0.00 0.00 4.20
2495 3061 1.074850 GAAGGGAGGGAGGAGGGAG 60.075 68.421 0.00 0.00 0.00 4.30
2496 3062 3.339951 AAGGGAGGGAGGAGGGAGC 62.340 68.421 0.00 0.00 0.00 4.70
2497 3063 3.773154 GGGAGGGAGGAGGGAGCT 61.773 72.222 0.00 0.00 0.00 4.09
2610 3199 3.157949 CGCTCTCCCCCTCCCTTC 61.158 72.222 0.00 0.00 0.00 3.46
2630 3219 2.913777 GGCCTTTCCGTTGTGATTAC 57.086 50.000 0.00 0.00 0.00 1.89
2631 3220 2.433436 GGCCTTTCCGTTGTGATTACT 58.567 47.619 0.00 0.00 0.00 2.24
2632 3221 2.418976 GGCCTTTCCGTTGTGATTACTC 59.581 50.000 0.00 0.00 0.00 2.59
2633 3222 2.418976 GCCTTTCCGTTGTGATTACTCC 59.581 50.000 0.00 0.00 0.00 3.85
2635 3224 4.622220 GCCTTTCCGTTGTGATTACTCCTA 60.622 45.833 0.00 0.00 0.00 2.94
2672 3266 1.532868 CAAAACTGCCGAGTCCAGAAG 59.467 52.381 3.69 0.00 34.47 2.85
2694 3291 2.985282 CACGGCTGGCCATTGTGT 60.985 61.111 18.90 8.63 35.37 3.72
2714 3311 5.281727 GTGTGTTTCACAGGAGAAAAATCC 58.718 41.667 2.71 0.00 45.43 3.01
2719 3316 4.202245 TCACAGGAGAAAAATCCGGTAG 57.798 45.455 0.00 0.00 44.65 3.18
2720 3317 2.678336 CACAGGAGAAAAATCCGGTAGC 59.322 50.000 0.00 0.00 44.65 3.58
2727 3324 2.403252 AAAATCCGGTAGCACTCCTG 57.597 50.000 0.00 0.00 0.00 3.86
2778 3381 4.385405 GCAGCGCAGGGAGTGTCT 62.385 66.667 11.47 0.00 0.00 3.41
2779 3382 2.433838 CAGCGCAGGGAGTGTCTG 60.434 66.667 11.47 0.00 35.49 3.51
2780 3383 2.919856 AGCGCAGGGAGTGTCTGT 60.920 61.111 11.47 0.00 34.89 3.41
2781 3384 2.433318 GCGCAGGGAGTGTCTGTC 60.433 66.667 0.30 0.00 34.89 3.51
2782 3385 2.936912 GCGCAGGGAGTGTCTGTCT 61.937 63.158 0.30 0.00 34.89 3.41
2783 3386 1.214062 CGCAGGGAGTGTCTGTCTC 59.786 63.158 0.00 0.00 34.89 3.36
2784 3387 1.214062 GCAGGGAGTGTCTGTCTCG 59.786 63.158 0.00 0.00 34.89 4.04
2785 3388 1.528292 GCAGGGAGTGTCTGTCTCGT 61.528 60.000 0.00 0.00 34.89 4.18
2786 3389 1.822506 CAGGGAGTGTCTGTCTCGTA 58.177 55.000 0.00 0.00 33.26 3.43
2787 3390 1.469308 CAGGGAGTGTCTGTCTCGTAC 59.531 57.143 0.00 0.00 33.26 3.67
2788 3391 1.351683 AGGGAGTGTCTGTCTCGTACT 59.648 52.381 0.00 0.00 33.26 2.73
2789 3392 1.738908 GGGAGTGTCTGTCTCGTACTC 59.261 57.143 0.00 0.00 37.60 2.59
2791 3394 2.702261 GAGTGTCTGTCTCGTACTCCT 58.298 52.381 0.00 0.00 33.44 3.69
2792 3395 3.859443 GAGTGTCTGTCTCGTACTCCTA 58.141 50.000 0.00 0.00 33.44 2.94
2793 3396 3.864243 AGTGTCTGTCTCGTACTCCTAG 58.136 50.000 0.00 0.00 0.00 3.02
2794 3397 3.261390 AGTGTCTGTCTCGTACTCCTAGT 59.739 47.826 0.00 0.00 0.00 2.57
2795 3398 4.465660 AGTGTCTGTCTCGTACTCCTAGTA 59.534 45.833 0.00 0.00 0.00 1.82
2796 3399 4.805192 GTGTCTGTCTCGTACTCCTAGTAG 59.195 50.000 0.00 0.00 30.12 2.57
2797 3400 4.465660 TGTCTGTCTCGTACTCCTAGTAGT 59.534 45.833 0.00 0.00 30.12 2.73
2798 3401 5.654209 TGTCTGTCTCGTACTCCTAGTAGTA 59.346 44.000 0.00 0.00 30.12 1.82
2799 3402 6.183360 TGTCTGTCTCGTACTCCTAGTAGTAG 60.183 46.154 0.00 0.00 32.69 2.57
2800 3403 4.942852 TGTCTCGTACTCCTAGTAGTAGC 58.057 47.826 0.00 0.00 32.69 3.58
2801 3404 4.202202 TGTCTCGTACTCCTAGTAGTAGCC 60.202 50.000 0.00 0.00 32.69 3.93
2802 3405 3.963374 TCTCGTACTCCTAGTAGTAGCCA 59.037 47.826 0.00 0.00 32.69 4.75
2803 3406 4.406972 TCTCGTACTCCTAGTAGTAGCCAA 59.593 45.833 0.00 0.00 32.69 4.52
2804 3407 5.071519 TCTCGTACTCCTAGTAGTAGCCAAT 59.928 44.000 0.00 0.00 32.69 3.16
2805 3408 5.303971 TCGTACTCCTAGTAGTAGCCAATC 58.696 45.833 0.00 0.00 32.69 2.67
2806 3409 4.455190 CGTACTCCTAGTAGTAGCCAATCC 59.545 50.000 0.00 0.00 32.69 3.01
2807 3410 4.817874 ACTCCTAGTAGTAGCCAATCCT 57.182 45.455 0.00 0.00 0.00 3.24
2808 3411 5.145513 ACTCCTAGTAGTAGCCAATCCTT 57.854 43.478 0.00 0.00 0.00 3.36
2809 3412 4.896482 ACTCCTAGTAGTAGCCAATCCTTG 59.104 45.833 0.00 0.00 0.00 3.61
2810 3413 4.880164 TCCTAGTAGTAGCCAATCCTTGT 58.120 43.478 0.00 0.00 0.00 3.16
2811 3414 4.649674 TCCTAGTAGTAGCCAATCCTTGTG 59.350 45.833 0.00 0.00 0.00 3.33
2812 3415 3.914426 AGTAGTAGCCAATCCTTGTGG 57.086 47.619 0.00 0.00 39.33 4.17
2813 3416 2.505819 AGTAGTAGCCAATCCTTGTGGG 59.494 50.000 0.00 0.00 36.58 4.61
2814 3417 0.034089 AGTAGCCAATCCTTGTGGGC 60.034 55.000 0.00 0.00 46.77 5.36
2816 3419 2.283821 GCCAATCCTTGTGGGCCA 60.284 61.111 0.00 0.00 40.55 5.36
2817 3420 2.649129 GCCAATCCTTGTGGGCCAC 61.649 63.158 29.75 29.75 40.55 5.01
2818 3421 2.342650 CCAATCCTTGTGGGCCACG 61.343 63.158 30.14 17.51 37.14 4.94
2819 3422 1.603455 CAATCCTTGTGGGCCACGT 60.603 57.895 30.14 11.76 37.14 4.49
2820 3423 0.322098 CAATCCTTGTGGGCCACGTA 60.322 55.000 30.14 19.84 37.14 3.57
2821 3424 0.623723 AATCCTTGTGGGCCACGTAT 59.376 50.000 30.14 17.62 37.14 3.06
2822 3425 0.107214 ATCCTTGTGGGCCACGTATG 60.107 55.000 30.14 18.52 37.14 2.39
2823 3426 1.195442 TCCTTGTGGGCCACGTATGA 61.195 55.000 30.14 20.37 37.14 2.15
2824 3427 1.024579 CCTTGTGGGCCACGTATGAC 61.025 60.000 30.14 6.64 37.14 3.06
2826 3429 1.817911 TTGTGGGCCACGTATGACGA 61.818 55.000 30.14 8.61 46.05 4.20
2827 3430 1.079681 GTGGGCCACGTATGACGAA 60.080 57.895 22.83 0.00 46.05 3.85
2828 3431 0.671163 GTGGGCCACGTATGACGAAA 60.671 55.000 22.83 0.00 46.05 3.46
2829 3432 0.250793 TGGGCCACGTATGACGAAAT 59.749 50.000 0.00 0.00 46.05 2.17
2830 3433 0.655733 GGGCCACGTATGACGAAATG 59.344 55.000 4.39 0.00 46.05 2.32
2831 3434 1.365699 GGCCACGTATGACGAAATGT 58.634 50.000 5.94 0.00 46.05 2.71
2832 3435 1.062002 GGCCACGTATGACGAAATGTG 59.938 52.381 5.94 0.00 46.05 3.21
2833 3436 1.730064 GCCACGTATGACGAAATGTGT 59.270 47.619 5.94 0.00 46.05 3.72
2834 3437 2.924926 GCCACGTATGACGAAATGTGTA 59.075 45.455 5.94 0.00 46.05 2.90
2835 3438 3.241868 GCCACGTATGACGAAATGTGTAC 60.242 47.826 5.94 0.00 46.05 2.90
2836 3439 4.171005 CCACGTATGACGAAATGTGTACT 58.829 43.478 5.94 0.00 46.05 2.73
2837 3440 4.031314 CCACGTATGACGAAATGTGTACTG 59.969 45.833 5.94 0.00 46.05 2.74
2838 3441 3.611113 ACGTATGACGAAATGTGTACTGC 59.389 43.478 5.94 0.00 46.05 4.40
2839 3442 3.857665 CGTATGACGAAATGTGTACTGCT 59.142 43.478 0.00 0.00 46.05 4.24
2840 3443 5.032220 CGTATGACGAAATGTGTACTGCTA 58.968 41.667 0.00 0.00 46.05 3.49
2841 3444 5.171516 CGTATGACGAAATGTGTACTGCTAG 59.828 44.000 0.00 0.00 46.05 3.42
2842 3445 4.514781 TGACGAAATGTGTACTGCTAGT 57.485 40.909 0.00 0.00 0.00 2.57
2843 3446 4.234574 TGACGAAATGTGTACTGCTAGTG 58.765 43.478 0.00 0.00 0.00 2.74
2844 3447 2.993899 ACGAAATGTGTACTGCTAGTGC 59.006 45.455 0.00 0.00 40.20 4.40
2845 3448 3.254060 CGAAATGTGTACTGCTAGTGCT 58.746 45.455 0.00 0.00 40.48 4.40
2846 3449 4.082408 ACGAAATGTGTACTGCTAGTGCTA 60.082 41.667 0.00 0.00 40.48 3.49
2847 3450 4.265556 CGAAATGTGTACTGCTAGTGCTAC 59.734 45.833 0.00 4.23 40.48 3.58
2848 3451 3.802948 ATGTGTACTGCTAGTGCTACC 57.197 47.619 0.00 0.00 40.48 3.18
2849 3452 1.471287 TGTGTACTGCTAGTGCTACCG 59.529 52.381 0.00 0.00 40.48 4.02
2850 3453 1.471684 GTGTACTGCTAGTGCTACCGT 59.528 52.381 0.00 0.00 40.48 4.83
2851 3454 1.741706 TGTACTGCTAGTGCTACCGTC 59.258 52.381 0.00 0.00 40.48 4.79
2852 3455 1.741706 GTACTGCTAGTGCTACCGTCA 59.258 52.381 0.00 0.00 40.48 4.35
2853 3456 0.526662 ACTGCTAGTGCTACCGTCAC 59.473 55.000 0.00 0.00 40.48 3.67
2854 3457 0.811915 CTGCTAGTGCTACCGTCACT 59.188 55.000 1.18 1.18 45.71 3.41
2855 3458 2.014857 CTGCTAGTGCTACCGTCACTA 58.985 52.381 3.29 3.29 43.75 2.74
2856 3459 2.619177 CTGCTAGTGCTACCGTCACTAT 59.381 50.000 3.68 0.00 43.58 2.12
2857 3460 2.357952 TGCTAGTGCTACCGTCACTATG 59.642 50.000 3.68 1.12 43.58 2.23
2858 3461 2.617308 GCTAGTGCTACCGTCACTATGA 59.383 50.000 3.68 0.00 43.58 2.15
2859 3462 3.304123 GCTAGTGCTACCGTCACTATGAG 60.304 52.174 3.68 0.00 43.58 2.90
2860 3463 2.025155 AGTGCTACCGTCACTATGAGG 58.975 52.381 0.00 0.00 42.45 3.86
2861 3464 0.744874 TGCTACCGTCACTATGAGGC 59.255 55.000 0.00 0.00 31.43 4.70
2862 3465 0.032267 GCTACCGTCACTATGAGGCC 59.968 60.000 0.00 0.00 31.43 5.19
2863 3466 1.399714 CTACCGTCACTATGAGGCCA 58.600 55.000 5.01 0.00 31.43 5.36
2864 3467 1.754803 CTACCGTCACTATGAGGCCAA 59.245 52.381 5.01 0.00 31.43 4.52
2865 3468 0.249398 ACCGTCACTATGAGGCCAAC 59.751 55.000 5.01 0.00 31.43 3.77
2866 3469 0.537188 CCGTCACTATGAGGCCAACT 59.463 55.000 5.01 0.00 31.43 3.16
2867 3470 1.471676 CCGTCACTATGAGGCCAACTC 60.472 57.143 5.01 0.00 46.78 3.01
2868 3471 1.471676 CGTCACTATGAGGCCAACTCC 60.472 57.143 5.01 0.00 46.01 3.85
2869 3472 1.555075 GTCACTATGAGGCCAACTCCA 59.445 52.381 5.01 0.00 46.01 3.86
2870 3473 1.555075 TCACTATGAGGCCAACTCCAC 59.445 52.381 5.01 0.00 46.01 4.02
2871 3474 0.912486 ACTATGAGGCCAACTCCACC 59.088 55.000 5.01 0.00 46.01 4.61
2872 3475 0.179073 CTATGAGGCCAACTCCACCG 60.179 60.000 5.01 0.00 46.01 4.94
2873 3476 0.907704 TATGAGGCCAACTCCACCGT 60.908 55.000 5.01 0.00 46.01 4.83
2874 3477 2.358737 GAGGCCAACTCCACCGTG 60.359 66.667 5.01 0.00 40.49 4.94
2875 3478 4.643387 AGGCCAACTCCACCGTGC 62.643 66.667 5.01 0.00 0.00 5.34
2877 3480 4.980805 GCCAACTCCACCGTGCGA 62.981 66.667 0.00 0.00 0.00 5.10
2878 3481 3.041940 CCAACTCCACCGTGCGAC 61.042 66.667 0.00 0.00 0.00 5.19
2879 3482 3.041940 CAACTCCACCGTGCGACC 61.042 66.667 0.00 0.00 0.00 4.79
2880 3483 4.309950 AACTCCACCGTGCGACCC 62.310 66.667 0.00 0.00 0.00 4.46
2882 3485 3.066190 CTCCACCGTGCGACCCTA 61.066 66.667 0.00 0.00 0.00 3.53
2883 3486 2.601067 TCCACCGTGCGACCCTAA 60.601 61.111 0.00 0.00 0.00 2.69
2884 3487 2.162338 CTCCACCGTGCGACCCTAAA 62.162 60.000 0.00 0.00 0.00 1.85
2885 3488 2.030958 CCACCGTGCGACCCTAAAC 61.031 63.158 0.00 0.00 0.00 2.01
2886 3489 2.048877 ACCGTGCGACCCTAAACG 60.049 61.111 0.00 0.00 35.85 3.60
2888 3491 2.259204 CGTGCGACCCTAAACGGA 59.741 61.111 0.00 0.00 33.16 4.69
2889 3492 2.090524 CGTGCGACCCTAAACGGAC 61.091 63.158 0.00 0.00 44.65 4.79
2890 3493 2.090524 GTGCGACCCTAAACGGACG 61.091 63.158 0.00 0.00 40.36 4.79
2891 3494 2.507769 GCGACCCTAAACGGACGG 60.508 66.667 0.00 0.00 34.63 4.79
2892 3495 2.507769 CGACCCTAAACGGACGGC 60.508 66.667 0.00 0.00 33.16 5.68
2893 3496 2.125391 GACCCTAAACGGACGGCC 60.125 66.667 0.00 0.00 33.16 6.13
2904 3507 3.719144 GACGGCCGTTTTGTCCGG 61.719 66.667 34.65 0.00 46.78 5.14
2912 3515 2.875080 CGTTTTGTCCGGATTCTGTC 57.125 50.000 7.81 0.00 0.00 3.51
2913 3516 2.139917 CGTTTTGTCCGGATTCTGTCA 58.860 47.619 7.81 0.00 0.00 3.58
2914 3517 2.157668 CGTTTTGTCCGGATTCTGTCAG 59.842 50.000 7.81 0.00 0.00 3.51
2915 3518 3.139077 GTTTTGTCCGGATTCTGTCAGT 58.861 45.455 7.81 0.00 0.00 3.41
2916 3519 3.485463 TTTGTCCGGATTCTGTCAGTT 57.515 42.857 7.81 0.00 0.00 3.16
2917 3520 3.485463 TTGTCCGGATTCTGTCAGTTT 57.515 42.857 7.81 0.00 0.00 2.66
2918 3521 2.766313 TGTCCGGATTCTGTCAGTTTG 58.234 47.619 7.81 0.00 0.00 2.93
2919 3522 2.076863 GTCCGGATTCTGTCAGTTTGG 58.923 52.381 7.81 0.00 0.00 3.28
2920 3523 1.003118 TCCGGATTCTGTCAGTTTGGG 59.997 52.381 0.00 0.00 0.00 4.12
2921 3524 1.271379 CCGGATTCTGTCAGTTTGGGT 60.271 52.381 0.00 0.00 0.00 4.51
2922 3525 2.027561 CCGGATTCTGTCAGTTTGGGTA 60.028 50.000 0.00 0.00 0.00 3.69
2923 3526 3.262420 CGGATTCTGTCAGTTTGGGTAG 58.738 50.000 0.00 0.00 0.00 3.18
2924 3527 3.610911 GGATTCTGTCAGTTTGGGTAGG 58.389 50.000 0.00 0.00 0.00 3.18
2925 3528 3.610911 GATTCTGTCAGTTTGGGTAGGG 58.389 50.000 0.00 0.00 0.00 3.53
2926 3529 0.690762 TCTGTCAGTTTGGGTAGGGC 59.309 55.000 0.00 0.00 0.00 5.19
2927 3530 0.673644 CTGTCAGTTTGGGTAGGGCG 60.674 60.000 0.00 0.00 0.00 6.13
2928 3531 1.122632 TGTCAGTTTGGGTAGGGCGA 61.123 55.000 0.00 0.00 0.00 5.54
2929 3532 0.252197 GTCAGTTTGGGTAGGGCGAT 59.748 55.000 0.00 0.00 0.00 4.58
2930 3533 0.251916 TCAGTTTGGGTAGGGCGATG 59.748 55.000 0.00 0.00 0.00 3.84
2931 3534 0.251916 CAGTTTGGGTAGGGCGATGA 59.748 55.000 0.00 0.00 0.00 2.92
2932 3535 0.541863 AGTTTGGGTAGGGCGATGAG 59.458 55.000 0.00 0.00 0.00 2.90
2933 3536 0.463833 GTTTGGGTAGGGCGATGAGG 60.464 60.000 0.00 0.00 0.00 3.86
2934 3537 0.912487 TTTGGGTAGGGCGATGAGGT 60.912 55.000 0.00 0.00 0.00 3.85
2935 3538 1.335132 TTGGGTAGGGCGATGAGGTC 61.335 60.000 0.00 0.00 0.00 3.85
2943 3546 2.102357 CGATGAGGTCGTGTCCGG 59.898 66.667 0.00 0.00 45.19 5.14
2944 3547 2.494918 GATGAGGTCGTGTCCGGG 59.505 66.667 0.00 0.00 33.95 5.73
2945 3548 3.718210 GATGAGGTCGTGTCCGGGC 62.718 68.421 0.00 0.00 33.95 6.13
2950 3553 4.736896 GTCGTGTCCGGGCCTGTC 62.737 72.222 11.58 3.86 33.95 3.51
2953 3556 4.394712 GTGTCCGGGCCTGTCCTG 62.395 72.222 11.58 0.00 41.11 3.86
2958 3561 4.864334 CGGGCCTGTCCTGGATGC 62.864 72.222 2.29 3.41 37.58 3.91
2959 3562 4.864334 GGGCCTGTCCTGGATGCG 62.864 72.222 0.84 0.00 34.39 4.73
2960 3563 4.864334 GGCCTGTCCTGGATGCGG 62.864 72.222 0.00 2.03 0.00 5.69
2961 3564 4.101448 GCCTGTCCTGGATGCGGT 62.101 66.667 0.00 0.00 0.00 5.68
2962 3565 2.124983 CCTGTCCTGGATGCGGTG 60.125 66.667 0.00 0.00 0.00 4.94
2963 3566 2.124983 CTGTCCTGGATGCGGTGG 60.125 66.667 0.00 0.00 0.00 4.61
2964 3567 2.927856 TGTCCTGGATGCGGTGGT 60.928 61.111 0.00 0.00 0.00 4.16
2965 3568 2.125106 GTCCTGGATGCGGTGGTC 60.125 66.667 0.00 0.00 0.00 4.02
2966 3569 3.770040 TCCTGGATGCGGTGGTCG 61.770 66.667 0.00 0.00 42.76 4.79
2967 3570 4.082523 CCTGGATGCGGTGGTCGT 62.083 66.667 0.00 0.00 41.72 4.34
2968 3571 2.815211 CTGGATGCGGTGGTCGTG 60.815 66.667 0.00 0.00 41.72 4.35
3012 3615 2.954868 CGCATCCTGTCCGCGTAC 60.955 66.667 4.92 0.00 43.86 3.67
3013 3616 2.183300 GCATCCTGTCCGCGTACA 59.817 61.111 3.95 3.95 0.00 2.90
3014 3617 1.227263 GCATCCTGTCCGCGTACAT 60.227 57.895 4.55 0.00 0.00 2.29
3015 3618 0.810031 GCATCCTGTCCGCGTACATT 60.810 55.000 4.55 0.00 0.00 2.71
3016 3619 1.651987 CATCCTGTCCGCGTACATTT 58.348 50.000 4.55 0.00 0.00 2.32
3017 3620 2.006888 CATCCTGTCCGCGTACATTTT 58.993 47.619 4.55 0.00 0.00 1.82
3018 3621 2.172851 TCCTGTCCGCGTACATTTTT 57.827 45.000 4.55 0.00 0.00 1.94
3019 3622 2.070783 TCCTGTCCGCGTACATTTTTC 58.929 47.619 4.55 0.00 0.00 2.29
3020 3623 2.073816 CCTGTCCGCGTACATTTTTCT 58.926 47.619 4.55 0.00 0.00 2.52
3021 3624 2.482721 CCTGTCCGCGTACATTTTTCTT 59.517 45.455 4.55 0.00 0.00 2.52
3022 3625 3.058501 CCTGTCCGCGTACATTTTTCTTT 60.059 43.478 4.55 0.00 0.00 2.52
3023 3626 3.879427 TGTCCGCGTACATTTTTCTTTG 58.121 40.909 0.00 0.00 0.00 2.77
3024 3627 2.655001 GTCCGCGTACATTTTTCTTTGC 59.345 45.455 4.92 0.00 0.00 3.68
3025 3628 2.290916 TCCGCGTACATTTTTCTTTGCA 59.709 40.909 4.92 0.00 0.00 4.08
3026 3629 3.046390 CCGCGTACATTTTTCTTTGCAA 58.954 40.909 4.92 0.00 0.00 4.08
3027 3630 3.119463 CCGCGTACATTTTTCTTTGCAAG 59.881 43.478 4.92 0.00 0.00 4.01
3028 3631 3.728718 CGCGTACATTTTTCTTTGCAAGT 59.271 39.130 0.00 0.00 0.00 3.16
3029 3632 4.143824 CGCGTACATTTTTCTTTGCAAGTC 60.144 41.667 0.00 0.00 0.00 3.01
3030 3633 4.148174 GCGTACATTTTTCTTTGCAAGTCC 59.852 41.667 0.00 0.00 0.00 3.85
3031 3634 5.519722 CGTACATTTTTCTTTGCAAGTCCT 58.480 37.500 0.00 0.00 0.00 3.85
3032 3635 5.977129 CGTACATTTTTCTTTGCAAGTCCTT 59.023 36.000 0.00 0.00 0.00 3.36
3033 3636 7.136119 CGTACATTTTTCTTTGCAAGTCCTTA 58.864 34.615 0.00 0.00 0.00 2.69
3034 3637 7.646130 CGTACATTTTTCTTTGCAAGTCCTTAA 59.354 33.333 0.00 0.00 0.00 1.85
3035 3638 7.770801 ACATTTTTCTTTGCAAGTCCTTAAC 57.229 32.000 0.00 0.00 0.00 2.01
3036 3639 7.555965 ACATTTTTCTTTGCAAGTCCTTAACT 58.444 30.769 0.00 0.00 41.10 2.24
3038 3641 8.542953 CATTTTTCTTTGCAAGTCCTTAACTTC 58.457 33.333 0.00 0.00 45.28 3.01
3039 3642 7.404671 TTTTCTTTGCAAGTCCTTAACTTCT 57.595 32.000 0.00 0.00 45.28 2.85
3040 3643 7.404671 TTTCTTTGCAAGTCCTTAACTTCTT 57.595 32.000 0.00 0.00 45.28 2.52
3041 3644 7.404671 TTCTTTGCAAGTCCTTAACTTCTTT 57.595 32.000 0.00 0.00 45.28 2.52
3042 3645 7.404671 TCTTTGCAAGTCCTTAACTTCTTTT 57.595 32.000 0.00 0.00 45.28 2.27
3043 3646 7.480810 TCTTTGCAAGTCCTTAACTTCTTTTC 58.519 34.615 0.00 0.00 45.28 2.29
3044 3647 6.767524 TTGCAAGTCCTTAACTTCTTTTCA 57.232 33.333 0.00 0.00 45.28 2.69
3045 3648 6.959639 TGCAAGTCCTTAACTTCTTTTCAT 57.040 33.333 0.00 0.00 45.28 2.57
3046 3649 6.970484 TGCAAGTCCTTAACTTCTTTTCATC 58.030 36.000 0.00 0.00 45.28 2.92
3047 3650 6.545666 TGCAAGTCCTTAACTTCTTTTCATCA 59.454 34.615 0.00 0.00 45.28 3.07
3048 3651 7.231317 TGCAAGTCCTTAACTTCTTTTCATCAT 59.769 33.333 0.00 0.00 45.28 2.45
3049 3652 8.084684 GCAAGTCCTTAACTTCTTTTCATCATT 58.915 33.333 0.00 0.00 45.28 2.57
3050 3653 9.971922 CAAGTCCTTAACTTCTTTTCATCATTT 57.028 29.630 0.00 0.00 45.28 2.32
3059 3662 9.981114 AACTTCTTTTCATCATTTATTTTCGGT 57.019 25.926 0.00 0.00 0.00 4.69
3068 3671 9.389755 TCATCATTTATTTTCGGTACATGAAGA 57.610 29.630 0.00 0.00 0.00 2.87
3076 3679 8.731275 ATTTTCGGTACATGAAGAATACATCA 57.269 30.769 0.00 0.00 0.00 3.07
3077 3680 8.731275 TTTTCGGTACATGAAGAATACATCAT 57.269 30.769 0.00 0.00 35.28 2.45
3078 3681 7.946655 TTCGGTACATGAAGAATACATCATC 57.053 36.000 0.00 0.00 33.09 2.92
3079 3682 6.149633 TCGGTACATGAAGAATACATCATCG 58.850 40.000 0.00 0.00 33.09 3.84
3080 3683 5.164051 CGGTACATGAAGAATACATCATCGC 60.164 44.000 0.00 0.00 33.09 4.58
3081 3684 5.696270 GGTACATGAAGAATACATCATCGCA 59.304 40.000 0.00 0.00 33.09 5.10
3082 3685 6.369890 GGTACATGAAGAATACATCATCGCAT 59.630 38.462 0.00 0.00 33.09 4.73
3083 3686 6.872628 ACATGAAGAATACATCATCGCATT 57.127 33.333 0.00 0.00 33.09 3.56
3084 3687 7.268199 ACATGAAGAATACATCATCGCATTT 57.732 32.000 0.00 0.00 33.09 2.32
3085 3688 7.709947 ACATGAAGAATACATCATCGCATTTT 58.290 30.769 0.00 0.00 33.09 1.82
3086 3689 7.646526 ACATGAAGAATACATCATCGCATTTTG 59.353 33.333 0.00 0.00 33.09 2.44
3087 3690 7.319142 TGAAGAATACATCATCGCATTTTGA 57.681 32.000 0.00 0.00 0.00 2.69
3088 3691 7.188834 TGAAGAATACATCATCGCATTTTGAC 58.811 34.615 0.00 0.00 0.00 3.18
3089 3692 6.932356 AGAATACATCATCGCATTTTGACT 57.068 33.333 0.00 0.00 0.00 3.41
3090 3693 8.437360 AAGAATACATCATCGCATTTTGACTA 57.563 30.769 0.00 0.00 0.00 2.59
3091 3694 8.081208 AGAATACATCATCGCATTTTGACTAG 57.919 34.615 0.00 0.00 0.00 2.57
3092 3695 7.712639 AGAATACATCATCGCATTTTGACTAGT 59.287 33.333 0.00 0.00 0.00 2.57
3093 3696 8.887036 AATACATCATCGCATTTTGACTAGTA 57.113 30.769 0.00 0.00 0.00 1.82
3094 3697 8.887036 ATACATCATCGCATTTTGACTAGTAA 57.113 30.769 0.00 0.00 0.00 2.24
3095 3698 7.609760 ACATCATCGCATTTTGACTAGTAAA 57.390 32.000 0.00 0.00 0.00 2.01
3096 3699 7.688372 ACATCATCGCATTTTGACTAGTAAAG 58.312 34.615 0.00 0.00 0.00 1.85
3097 3700 7.334421 ACATCATCGCATTTTGACTAGTAAAGT 59.666 33.333 0.00 0.00 42.80 2.66
3098 3701 8.817100 CATCATCGCATTTTGACTAGTAAAGTA 58.183 33.333 0.00 0.00 39.07 2.24
3099 3702 8.766000 TCATCGCATTTTGACTAGTAAAGTAA 57.234 30.769 0.00 0.00 39.07 2.24
3100 3703 8.869897 TCATCGCATTTTGACTAGTAAAGTAAG 58.130 33.333 0.00 0.00 39.07 2.34
3101 3704 8.869897 CATCGCATTTTGACTAGTAAAGTAAGA 58.130 33.333 0.00 0.00 39.07 2.10
3102 3705 8.236084 TCGCATTTTGACTAGTAAAGTAAGAC 57.764 34.615 0.00 0.00 39.07 3.01
3103 3706 7.330208 TCGCATTTTGACTAGTAAAGTAAGACC 59.670 37.037 0.00 0.00 39.07 3.85
3104 3707 7.412672 CGCATTTTGACTAGTAAAGTAAGACCC 60.413 40.741 0.00 0.00 39.07 4.46
3105 3708 7.389607 GCATTTTGACTAGTAAAGTAAGACCCA 59.610 37.037 0.00 0.00 39.07 4.51
3106 3709 9.280174 CATTTTGACTAGTAAAGTAAGACCCAA 57.720 33.333 0.00 0.00 39.07 4.12
3107 3710 9.856162 ATTTTGACTAGTAAAGTAAGACCCAAA 57.144 29.630 0.00 0.00 39.07 3.28
3108 3711 9.683870 TTTTGACTAGTAAAGTAAGACCCAAAA 57.316 29.630 0.00 1.17 39.07 2.44
3109 3712 9.683870 TTTGACTAGTAAAGTAAGACCCAAAAA 57.316 29.630 0.00 0.00 39.07 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.270358 GCCTAGGTATTGAGCCCGAAG 60.270 57.143 11.31 0.00 0.00 3.79
13 14 0.756903 GCCTAGGTATTGAGCCCGAA 59.243 55.000 11.31 0.00 0.00 4.30
14 15 1.119574 GGCCTAGGTATTGAGCCCGA 61.120 60.000 11.31 0.00 37.66 5.14
15 16 1.371558 GGCCTAGGTATTGAGCCCG 59.628 63.158 11.31 0.00 37.66 6.13
16 17 1.119574 TCGGCCTAGGTATTGAGCCC 61.120 60.000 11.31 0.00 40.65 5.19
17 18 0.318762 CTCGGCCTAGGTATTGAGCC 59.681 60.000 11.31 2.03 40.33 4.70
18 19 0.318762 CCTCGGCCTAGGTATTGAGC 59.681 60.000 15.35 0.00 31.46 4.26
19 20 0.318762 GCCTCGGCCTAGGTATTGAG 59.681 60.000 23.54 11.83 39.02 3.02
20 21 2.437625 GCCTCGGCCTAGGTATTGA 58.562 57.895 23.54 2.60 39.02 2.57
32 33 4.559063 CCTCATGGCAGGCCTCGG 62.559 72.222 0.00 0.00 36.94 4.63
33 34 3.457625 CTCCTCATGGCAGGCCTCG 62.458 68.421 0.00 0.00 36.94 4.63
34 35 2.509916 CTCCTCATGGCAGGCCTC 59.490 66.667 0.00 0.00 36.94 4.70
35 36 3.806667 GCTCCTCATGGCAGGCCT 61.807 66.667 12.19 0.00 36.94 5.19
36 37 3.432445 ATGCTCCTCATGGCAGGCC 62.432 63.158 2.62 2.62 41.88 5.19
37 38 1.897615 GATGCTCCTCATGGCAGGC 60.898 63.158 0.00 0.00 41.88 4.85
38 39 1.597302 CGATGCTCCTCATGGCAGG 60.597 63.158 0.00 0.00 41.88 4.85
39 40 1.597302 CCGATGCTCCTCATGGCAG 60.597 63.158 0.00 0.00 41.88 4.85
40 41 2.507452 CCGATGCTCCTCATGGCA 59.493 61.111 0.00 0.00 42.80 4.92
41 42 2.281345 CCCGATGCTCCTCATGGC 60.281 66.667 0.00 0.00 35.05 4.40
42 43 2.281345 GCCCGATGCTCCTCATGG 60.281 66.667 0.00 0.00 35.05 3.66
43 44 2.281345 GGCCCGATGCTCCTCATG 60.281 66.667 0.00 0.00 40.92 3.07
44 45 3.933722 CGGCCCGATGCTCCTCAT 61.934 66.667 0.00 0.00 40.92 2.90
85 86 4.828296 CCTGGTCATGGGCAGCCC 62.828 72.222 25.54 25.54 45.71 5.19
86 87 1.999634 ATACCTGGTCATGGGCAGCC 62.000 60.000 0.63 1.26 0.00 4.85
87 88 0.764890 TATACCTGGTCATGGGCAGC 59.235 55.000 0.63 0.00 0.00 5.25
88 89 2.909006 AGATATACCTGGTCATGGGCAG 59.091 50.000 0.63 0.00 0.00 4.85
89 90 2.639347 CAGATATACCTGGTCATGGGCA 59.361 50.000 0.63 0.00 0.00 5.36
90 91 2.026822 CCAGATATACCTGGTCATGGGC 60.027 54.545 4.76 0.00 46.62 5.36
91 92 3.988976 CCAGATATACCTGGTCATGGG 57.011 52.381 4.76 0.00 46.62 4.00
99 100 1.200252 CGAGCCGTCCAGATATACCTG 59.800 57.143 0.00 0.00 0.00 4.00
100 101 1.535833 CGAGCCGTCCAGATATACCT 58.464 55.000 0.00 0.00 0.00 3.08
101 102 0.109226 GCGAGCCGTCCAGATATACC 60.109 60.000 0.00 0.00 0.00 2.73
102 103 0.454620 CGCGAGCCGTCCAGATATAC 60.455 60.000 0.00 0.00 0.00 1.47
103 104 1.873863 CGCGAGCCGTCCAGATATA 59.126 57.895 0.00 0.00 0.00 0.86
104 105 2.645567 CGCGAGCCGTCCAGATAT 59.354 61.111 0.00 0.00 0.00 1.63
123 124 1.007387 CAAAGCTTTGGCCGGTCAC 60.007 57.895 28.12 0.00 39.73 3.67
189 190 1.488393 GTGCTCCTCCTATTGCTCCTT 59.512 52.381 0.00 0.00 0.00 3.36
198 199 4.356979 CGGAAGGTGCTCCTCCTA 57.643 61.111 7.99 0.00 44.35 2.94
236 237 9.798994 GATACTTCTTCTGTAAACGGATCTTAA 57.201 33.333 0.00 0.00 0.00 1.85
237 238 8.127327 CGATACTTCTTCTGTAAACGGATCTTA 58.873 37.037 0.00 0.00 0.00 2.10
239 240 6.496571 CGATACTTCTTCTGTAAACGGATCT 58.503 40.000 0.00 0.00 0.00 2.75
260 261 1.227438 CCCGTGGGTTATTCGCGAT 60.227 57.895 10.88 2.60 40.11 4.58
278 279 1.137086 TCCAGATCGCTAGGTTTGCTC 59.863 52.381 0.00 0.00 0.00 4.26
321 330 1.306397 TCTCCCCTGCTGCTCATCA 60.306 57.895 0.00 0.00 0.00 3.07
323 332 0.619832 TTCTCTCCCCTGCTGCTCAT 60.620 55.000 0.00 0.00 0.00 2.90
324 333 1.229304 TTCTCTCCCCTGCTGCTCA 60.229 57.895 0.00 0.00 0.00 4.26
331 340 2.224867 TGCCTTTTTCTTCTCTCCCCTG 60.225 50.000 0.00 0.00 0.00 4.45
332 341 2.040947 CTGCCTTTTTCTTCTCTCCCCT 59.959 50.000 0.00 0.00 0.00 4.79
333 342 2.441410 CTGCCTTTTTCTTCTCTCCCC 58.559 52.381 0.00 0.00 0.00 4.81
335 344 1.466558 CGCTGCCTTTTTCTTCTCTCC 59.533 52.381 0.00 0.00 0.00 3.71
336 345 2.414825 CTCGCTGCCTTTTTCTTCTCTC 59.585 50.000 0.00 0.00 0.00 3.20
337 346 2.421619 CTCGCTGCCTTTTTCTTCTCT 58.578 47.619 0.00 0.00 0.00 3.10
338 347 1.135831 GCTCGCTGCCTTTTTCTTCTC 60.136 52.381 0.00 0.00 35.15 2.87
339 348 0.877743 GCTCGCTGCCTTTTTCTTCT 59.122 50.000 0.00 0.00 35.15 2.85
340 349 0.593128 TGCTCGCTGCCTTTTTCTTC 59.407 50.000 0.00 0.00 42.00 2.87
341 350 1.000938 CTTGCTCGCTGCCTTTTTCTT 60.001 47.619 0.00 0.00 42.00 2.52
426 435 4.025401 GGCACTGGTCAAACGCCG 62.025 66.667 0.00 0.00 32.14 6.46
458 468 2.278182 GACGGCTCTCCTCTCTGTGC 62.278 65.000 0.00 0.00 0.00 4.57
463 473 1.711060 CTGTCGACGGCTCTCCTCTC 61.711 65.000 12.25 0.00 0.00 3.20
718 754 4.853050 ATCGAGCTGCTGCCTGGC 62.853 66.667 12.87 12.87 40.80 4.85
769 805 1.209523 TTTTTACCTCCCCTCCCCCG 61.210 60.000 0.00 0.00 0.00 5.73
771 807 0.034767 CGTTTTTACCTCCCCTCCCC 60.035 60.000 0.00 0.00 0.00 4.81
775 811 0.989602 CCTCCGTTTTTACCTCCCCT 59.010 55.000 0.00 0.00 0.00 4.79
895 934 1.546961 CCCCTATCTATCGCTCCGTT 58.453 55.000 0.00 0.00 0.00 4.44
898 937 0.614979 TGGCCCCTATCTATCGCTCC 60.615 60.000 0.00 0.00 0.00 4.70
899 938 1.410882 GATGGCCCCTATCTATCGCTC 59.589 57.143 0.00 0.00 0.00 5.03
900 939 1.490574 GATGGCCCCTATCTATCGCT 58.509 55.000 0.00 0.00 0.00 4.93
901 940 0.466124 GGATGGCCCCTATCTATCGC 59.534 60.000 0.00 0.00 0.00 4.58
902 941 2.166907 AGGATGGCCCCTATCTATCG 57.833 55.000 0.00 0.00 34.07 2.92
919 973 4.125703 CTCGTGGTGGTAGTAGTAGTAGG 58.874 52.174 0.00 0.00 0.00 3.18
920 974 3.559242 GCTCGTGGTGGTAGTAGTAGTAG 59.441 52.174 0.00 0.00 0.00 2.57
921 975 3.535561 GCTCGTGGTGGTAGTAGTAGTA 58.464 50.000 0.00 0.00 0.00 1.82
922 976 2.363683 GCTCGTGGTGGTAGTAGTAGT 58.636 52.381 0.00 0.00 0.00 2.73
986 1306 2.503061 CCATGGCGACTCTCCCTG 59.497 66.667 0.00 0.00 0.00 4.45
989 1309 3.112205 ATGGCCATGGCGACTCTCC 62.112 63.158 29.90 14.85 43.06 3.71
1314 1642 2.024729 TAGCACATCTCGCGCTCG 59.975 61.111 5.56 0.00 37.20 5.03
1538 1881 4.845580 AAGAGGATGCTGGCGGCG 62.846 66.667 14.59 0.51 45.43 6.46
1539 1882 2.439156 AAAGAGGATGCTGGCGGC 60.439 61.111 12.43 12.43 42.22 6.53
1542 1885 3.087781 AGAAAAGAAAGAGGATGCTGGC 58.912 45.455 0.00 0.00 0.00 4.85
1545 1888 7.594351 AAGAAAAGAAAAGAAAGAGGATGCT 57.406 32.000 0.00 0.00 0.00 3.79
1546 1889 8.654230 AAAAGAAAAGAAAAGAAAGAGGATGC 57.346 30.769 0.00 0.00 0.00 3.91
1552 1895 8.811994 TCCCAAGAAAAGAAAAGAAAAGAAAGA 58.188 29.630 0.00 0.00 0.00 2.52
1554 1897 7.549134 GCTCCCAAGAAAAGAAAAGAAAAGAAA 59.451 33.333 0.00 0.00 0.00 2.52
1556 1899 6.154363 TGCTCCCAAGAAAAGAAAAGAAAAGA 59.846 34.615 0.00 0.00 0.00 2.52
1557 1900 6.340522 TGCTCCCAAGAAAAGAAAAGAAAAG 58.659 36.000 0.00 0.00 0.00 2.27
1558 1901 6.293004 TGCTCCCAAGAAAAGAAAAGAAAA 57.707 33.333 0.00 0.00 0.00 2.29
1560 1903 5.930837 TTGCTCCCAAGAAAAGAAAAGAA 57.069 34.783 0.00 0.00 0.00 2.52
1573 1916 1.004560 CGAGTCAGCTTGCTCCCAA 60.005 57.895 8.28 0.00 0.00 4.12
1574 1917 2.159819 GACGAGTCAGCTTGCTCCCA 62.160 60.000 8.28 0.00 0.00 4.37
1575 1918 1.446966 GACGAGTCAGCTTGCTCCC 60.447 63.158 8.28 0.00 0.00 4.30
1576 1919 1.446966 GGACGAGTCAGCTTGCTCC 60.447 63.158 5.55 0.00 0.00 4.70
1578 1921 1.005630 GTGGACGAGTCAGCTTGCT 60.006 57.895 5.55 0.00 0.00 3.91
1579 1922 0.601311 AAGTGGACGAGTCAGCTTGC 60.601 55.000 5.55 0.00 0.00 4.01
1581 1924 1.271102 GAGAAGTGGACGAGTCAGCTT 59.729 52.381 5.55 8.11 0.00 3.74
1582 1925 0.885196 GAGAAGTGGACGAGTCAGCT 59.115 55.000 5.55 0.00 0.00 4.24
1583 1926 0.885196 AGAGAAGTGGACGAGTCAGC 59.115 55.000 5.55 0.00 0.00 4.26
1584 1927 1.470890 GGAGAGAAGTGGACGAGTCAG 59.529 57.143 5.55 0.00 0.00 3.51
1585 1928 1.074084 AGGAGAGAAGTGGACGAGTCA 59.926 52.381 5.55 0.00 0.00 3.41
1586 1929 1.741145 GAGGAGAGAAGTGGACGAGTC 59.259 57.143 0.00 0.00 0.00 3.36
1587 1930 1.614850 GGAGGAGAGAAGTGGACGAGT 60.615 57.143 0.00 0.00 0.00 4.18
1588 1931 1.099689 GGAGGAGAGAAGTGGACGAG 58.900 60.000 0.00 0.00 0.00 4.18
1591 1934 0.899019 GGTGGAGGAGAGAAGTGGAC 59.101 60.000 0.00 0.00 0.00 4.02
1592 1935 0.252284 GGGTGGAGGAGAGAAGTGGA 60.252 60.000 0.00 0.00 0.00 4.02
1593 1936 0.545309 TGGGTGGAGGAGAGAAGTGG 60.545 60.000 0.00 0.00 0.00 4.00
1595 1938 1.577736 CATGGGTGGAGGAGAGAAGT 58.422 55.000 0.00 0.00 0.00 3.01
1607 1950 4.863707 CGTGAGGATCCATGGGTG 57.136 61.111 15.82 0.00 0.00 4.61
1763 2116 6.891388 ACACTCTAGCTATGTGAGTAGTACT 58.109 40.000 24.62 1.37 38.80 2.73
1764 2117 7.411274 CAACACTCTAGCTATGTGAGTAGTAC 58.589 42.308 24.62 0.00 38.80 2.73
1801 2160 7.649973 GCAGCAGCTAATAGTTACTAGTAAGA 58.350 38.462 15.68 7.52 37.91 2.10
1826 2185 1.144565 CGTAGTAGCAGCAGCAGCAG 61.145 60.000 12.92 0.00 45.49 4.24
1827 2186 1.153765 CGTAGTAGCAGCAGCAGCA 60.154 57.895 12.92 0.00 45.49 4.41
1828 2187 0.249238 ATCGTAGTAGCAGCAGCAGC 60.249 55.000 3.17 0.46 45.49 5.25
1829 2188 1.485397 CATCGTAGTAGCAGCAGCAG 58.515 55.000 3.17 0.00 45.49 4.24
1830 2189 0.528466 GCATCGTAGTAGCAGCAGCA 60.528 55.000 3.17 0.00 45.49 4.41
1831 2190 0.249238 AGCATCGTAGTAGCAGCAGC 60.249 55.000 0.00 0.00 42.56 5.25
1832 2191 1.066152 TGAGCATCGTAGTAGCAGCAG 59.934 52.381 0.00 0.00 38.61 4.24
1833 2192 1.102978 TGAGCATCGTAGTAGCAGCA 58.897 50.000 0.00 0.00 38.61 4.41
1834 2193 2.323959 GATGAGCATCGTAGTAGCAGC 58.676 52.381 0.00 0.00 38.61 5.25
1835 2194 2.294512 TGGATGAGCATCGTAGTAGCAG 59.705 50.000 4.54 0.00 38.61 4.24
1836 2195 2.306847 TGGATGAGCATCGTAGTAGCA 58.693 47.619 4.54 0.00 38.61 3.49
1849 2208 1.690893 ACAGGGACGATGATGGATGAG 59.309 52.381 0.00 0.00 0.00 2.90
1885 2244 8.794335 AGTCAAGGAAAAGGAGAACATAATAC 57.206 34.615 0.00 0.00 0.00 1.89
1903 2262 1.676014 CCGGCCTAGTGAAAGTCAAGG 60.676 57.143 0.00 0.00 29.61 3.61
1905 2264 0.321298 GCCGGCCTAGTGAAAGTCAA 60.321 55.000 18.11 0.00 0.00 3.18
1907 2266 1.449778 GGCCGGCCTAGTGAAAGTC 60.450 63.158 38.76 6.70 0.00 3.01
1908 2267 2.669240 GGCCGGCCTAGTGAAAGT 59.331 61.111 38.76 0.00 0.00 2.66
1944 2303 3.135712 TCTGGTTTAGCTGAGTGACCAAA 59.864 43.478 0.00 0.00 39.68 3.28
2030 2389 5.245584 AGATCTACTACTGGTAGGTAGGC 57.754 47.826 11.73 7.40 45.78 3.93
2116 2475 9.035607 GGAGTAGCACCATAATATCATTAATCG 57.964 37.037 0.00 0.00 0.00 3.34
2141 2500 9.275398 CCAGTACTACTAGAACTGATAAGTAGG 57.725 40.741 15.78 0.00 43.66 3.18
2142 2501 9.835389 ACCAGTACTACTAGAACTGATAAGTAG 57.165 37.037 15.78 6.78 44.49 2.57
2184 2545 6.925718 CACATCAGATCATCACGGTAACTAAT 59.074 38.462 0.00 0.00 0.00 1.73
2202 2563 1.335810 AGCAACAGCAACACACATCAG 59.664 47.619 0.00 0.00 0.00 2.90
2207 2568 0.589729 CGACAGCAACAGCAACACAC 60.590 55.000 0.00 0.00 0.00 3.82
2243 2614 1.227383 CCTTTCTGCCCCGCCTAAT 59.773 57.895 0.00 0.00 0.00 1.73
2244 2615 2.674754 CCTTTCTGCCCCGCCTAA 59.325 61.111 0.00 0.00 0.00 2.69
2245 2616 3.407967 CCCTTTCTGCCCCGCCTA 61.408 66.667 0.00 0.00 0.00 3.93
2247 2618 4.803908 CTCCCTTTCTGCCCCGCC 62.804 72.222 0.00 0.00 0.00 6.13
2248 2619 4.803908 CCTCCCTTTCTGCCCCGC 62.804 72.222 0.00 0.00 0.00 6.13
2249 2620 4.803908 GCCTCCCTTTCTGCCCCG 62.804 72.222 0.00 0.00 0.00 5.73
2250 2621 4.803908 CGCCTCCCTTTCTGCCCC 62.804 72.222 0.00 0.00 0.00 5.80
2251 2622 3.717294 TCGCCTCCCTTTCTGCCC 61.717 66.667 0.00 0.00 0.00 5.36
2252 2623 2.436824 GTCGCCTCCCTTTCTGCC 60.437 66.667 0.00 0.00 0.00 4.85
2271 2642 2.125106 GCTTTCCCTCGCCGATGT 60.125 61.111 0.00 0.00 0.00 3.06
2319 2690 1.070786 GTCGTTGTTCCAGGAGGCA 59.929 57.895 0.00 0.00 33.74 4.75
2463 2884 7.733501 CCTCCCTCCCTTCTATAAAATACAGTA 59.266 40.741 0.00 0.00 0.00 2.74
2465 2886 6.787957 TCCTCCCTCCCTTCTATAAAATACAG 59.212 42.308 0.00 0.00 0.00 2.74
2467 3033 6.213802 CCTCCTCCCTCCCTTCTATAAAATAC 59.786 46.154 0.00 0.00 0.00 1.89
2471 3037 3.116317 CCCTCCTCCCTCCCTTCTATAAA 60.116 52.174 0.00 0.00 0.00 1.40
2476 3042 1.550374 TCCCTCCTCCCTCCCTTCT 60.550 63.158 0.00 0.00 0.00 2.85
2478 3044 3.124088 CTCCCTCCTCCCTCCCTT 58.876 66.667 0.00 0.00 0.00 3.95
2480 3046 2.404750 TAGCTCCCTCCTCCCTCCC 61.405 68.421 0.00 0.00 0.00 4.30
2486 3052 1.066071 GTTGGTTGTAGCTCCCTCCTC 60.066 57.143 0.00 0.00 0.00 3.71
2489 3055 0.606604 TCGTTGGTTGTAGCTCCCTC 59.393 55.000 0.00 0.00 0.00 4.30
2492 3058 1.653151 GGATCGTTGGTTGTAGCTCC 58.347 55.000 0.00 0.00 0.00 4.70
2494 3060 0.108329 CGGGATCGTTGGTTGTAGCT 60.108 55.000 0.00 0.00 0.00 3.32
2495 3061 1.087771 CCGGGATCGTTGGTTGTAGC 61.088 60.000 0.00 0.00 33.95 3.58
2496 3062 1.087771 GCCGGGATCGTTGGTTGTAG 61.088 60.000 2.18 0.00 33.95 2.74
2497 3063 1.078988 GCCGGGATCGTTGGTTGTA 60.079 57.895 2.18 0.00 33.95 2.41
2625 3214 7.647907 TCGTGTTTTCAAACTAGGAGTAATC 57.352 36.000 4.14 0.00 39.59 1.75
2626 3215 8.340443 GTTTCGTGTTTTCAAACTAGGAGTAAT 58.660 33.333 4.14 0.00 39.59 1.89
2628 3217 6.817641 TGTTTCGTGTTTTCAAACTAGGAGTA 59.182 34.615 4.14 0.00 39.59 2.59
2630 3219 6.114221 TGTTTCGTGTTTTCAAACTAGGAG 57.886 37.500 4.14 0.00 39.59 3.69
2631 3220 6.497785 TTGTTTCGTGTTTTCAAACTAGGA 57.502 33.333 4.14 0.30 39.59 2.94
2632 3221 7.327518 AGTTTTGTTTCGTGTTTTCAAACTAGG 59.672 33.333 4.14 0.00 39.59 3.02
2633 3222 8.153411 CAGTTTTGTTTCGTGTTTTCAAACTAG 58.847 33.333 4.14 0.00 39.59 2.57
2635 3224 6.563196 GCAGTTTTGTTTCGTGTTTTCAAACT 60.563 34.615 4.14 0.00 39.59 2.66
2720 3317 2.175878 AGCAAACAGTAGCAGGAGTG 57.824 50.000 1.19 0.00 0.00 3.51
2727 3324 2.412089 CGTGGTCTAAGCAAACAGTAGC 59.588 50.000 0.00 0.00 0.00 3.58
2768 3371 1.351683 AGTACGAGACAGACACTCCCT 59.648 52.381 0.00 0.00 0.00 4.20
2769 3372 1.738908 GAGTACGAGACAGACACTCCC 59.261 57.143 0.00 0.00 31.47 4.30
2770 3373 1.738908 GGAGTACGAGACAGACACTCC 59.261 57.143 3.50 3.50 46.12 3.85
2771 3374 2.702261 AGGAGTACGAGACAGACACTC 58.298 52.381 0.00 0.00 35.87 3.51
2772 3375 2.863132 AGGAGTACGAGACAGACACT 57.137 50.000 0.00 0.00 0.00 3.55
2773 3376 3.598299 ACTAGGAGTACGAGACAGACAC 58.402 50.000 0.00 0.00 0.00 3.67
2774 3377 3.977134 ACTAGGAGTACGAGACAGACA 57.023 47.619 0.00 0.00 0.00 3.41
2775 3378 5.009854 ACTACTAGGAGTACGAGACAGAC 57.990 47.826 5.58 0.00 0.00 3.51
2776 3379 5.221224 GCTACTACTAGGAGTACGAGACAGA 60.221 48.000 11.03 0.00 0.00 3.41
2777 3380 4.984161 GCTACTACTAGGAGTACGAGACAG 59.016 50.000 11.03 2.65 0.00 3.51
2778 3381 4.202202 GGCTACTACTAGGAGTACGAGACA 60.202 50.000 11.03 0.00 0.00 3.41
2779 3382 4.202202 TGGCTACTACTAGGAGTACGAGAC 60.202 50.000 11.03 6.50 0.00 3.36
2780 3383 3.963374 TGGCTACTACTAGGAGTACGAGA 59.037 47.826 11.03 0.00 0.00 4.04
2781 3384 4.333913 TGGCTACTACTAGGAGTACGAG 57.666 50.000 11.03 4.88 0.00 4.18
2782 3385 4.760530 TTGGCTACTACTAGGAGTACGA 57.239 45.455 11.03 0.00 0.00 3.43
2783 3386 4.455190 GGATTGGCTACTACTAGGAGTACG 59.545 50.000 11.03 8.64 0.00 3.67
2784 3387 5.633117 AGGATTGGCTACTACTAGGAGTAC 58.367 45.833 11.03 8.20 0.00 2.73
2785 3388 5.926580 AGGATTGGCTACTACTAGGAGTA 57.073 43.478 14.32 14.32 0.00 2.59
2786 3389 4.817874 AGGATTGGCTACTACTAGGAGT 57.182 45.455 13.42 13.42 0.00 3.85
2787 3390 5.461032 CAAGGATTGGCTACTACTAGGAG 57.539 47.826 0.00 0.00 43.94 3.69
2802 3405 0.623723 ATACGTGGCCCACAAGGATT 59.376 50.000 15.45 0.00 38.24 3.01
2803 3406 0.107214 CATACGTGGCCCACAAGGAT 60.107 55.000 15.45 0.00 38.24 3.24
2804 3407 1.195442 TCATACGTGGCCCACAAGGA 61.195 55.000 15.45 5.56 38.24 3.36
2805 3408 1.024579 GTCATACGTGGCCCACAAGG 61.025 60.000 15.45 2.98 33.40 3.61
2806 3409 1.358725 CGTCATACGTGGCCCACAAG 61.359 60.000 15.45 0.38 36.74 3.16
2807 3410 1.374885 CGTCATACGTGGCCCACAA 60.375 57.895 15.45 0.95 36.74 3.33
2808 3411 1.817911 TTCGTCATACGTGGCCCACA 61.818 55.000 15.45 0.00 43.14 4.17
2809 3412 0.671163 TTTCGTCATACGTGGCCCAC 60.671 55.000 2.98 2.98 43.14 4.61
2810 3413 0.250793 ATTTCGTCATACGTGGCCCA 59.749 50.000 0.00 0.00 43.14 5.36
2811 3414 0.655733 CATTTCGTCATACGTGGCCC 59.344 55.000 0.00 0.00 43.14 5.80
2812 3415 1.062002 CACATTTCGTCATACGTGGCC 59.938 52.381 0.00 0.00 43.14 5.36
2813 3416 1.730064 ACACATTTCGTCATACGTGGC 59.270 47.619 0.00 0.00 43.14 5.01
2814 3417 4.031314 CAGTACACATTTCGTCATACGTGG 59.969 45.833 0.00 0.00 43.14 4.94
2815 3418 4.490319 GCAGTACACATTTCGTCATACGTG 60.490 45.833 0.00 0.00 43.14 4.49
2816 3419 3.611113 GCAGTACACATTTCGTCATACGT 59.389 43.478 0.00 0.00 43.14 3.57
2817 3420 3.857665 AGCAGTACACATTTCGTCATACG 59.142 43.478 0.00 0.00 44.19 3.06
2818 3421 6.020599 CACTAGCAGTACACATTTCGTCATAC 60.021 42.308 0.00 0.00 0.00 2.39
2819 3422 6.033966 CACTAGCAGTACACATTTCGTCATA 58.966 40.000 0.00 0.00 0.00 2.15
2820 3423 4.864806 CACTAGCAGTACACATTTCGTCAT 59.135 41.667 0.00 0.00 0.00 3.06
2821 3424 4.234574 CACTAGCAGTACACATTTCGTCA 58.765 43.478 0.00 0.00 0.00 4.35
2822 3425 3.060895 GCACTAGCAGTACACATTTCGTC 59.939 47.826 0.00 0.00 41.58 4.20
2823 3426 2.993899 GCACTAGCAGTACACATTTCGT 59.006 45.455 0.00 0.00 41.58 3.85
2824 3427 3.254060 AGCACTAGCAGTACACATTTCG 58.746 45.455 0.00 0.00 45.49 3.46
2825 3428 4.567159 GGTAGCACTAGCAGTACACATTTC 59.433 45.833 0.00 0.00 45.49 2.17
2826 3429 4.504858 GGTAGCACTAGCAGTACACATTT 58.495 43.478 0.00 0.00 45.49 2.32
2827 3430 3.428999 CGGTAGCACTAGCAGTACACATT 60.429 47.826 7.57 0.00 45.49 2.71
2828 3431 2.099263 CGGTAGCACTAGCAGTACACAT 59.901 50.000 7.57 0.00 45.49 3.21
2829 3432 1.471287 CGGTAGCACTAGCAGTACACA 59.529 52.381 7.57 0.00 45.49 3.72
2830 3433 1.471684 ACGGTAGCACTAGCAGTACAC 59.528 52.381 7.57 0.00 45.49 2.90
2831 3434 1.741706 GACGGTAGCACTAGCAGTACA 59.258 52.381 7.57 0.00 45.49 2.90
2832 3435 1.741706 TGACGGTAGCACTAGCAGTAC 59.258 52.381 7.57 0.00 45.49 2.73
2833 3436 1.741706 GTGACGGTAGCACTAGCAGTA 59.258 52.381 7.57 0.00 45.49 2.74
2834 3437 0.526662 GTGACGGTAGCACTAGCAGT 59.473 55.000 7.57 6.02 45.49 4.40
2835 3438 0.811915 AGTGACGGTAGCACTAGCAG 59.188 55.000 7.57 3.25 44.27 4.24
2836 3439 2.118313 TAGTGACGGTAGCACTAGCA 57.882 50.000 7.57 0.00 44.27 3.49
2841 3444 1.536284 GCCTCATAGTGACGGTAGCAC 60.536 57.143 0.00 0.00 36.53 4.40
2842 3445 0.744874 GCCTCATAGTGACGGTAGCA 59.255 55.000 0.00 0.00 0.00 3.49
2843 3446 0.032267 GGCCTCATAGTGACGGTAGC 59.968 60.000 0.00 0.00 0.00 3.58
2844 3447 1.399714 TGGCCTCATAGTGACGGTAG 58.600 55.000 3.32 0.00 0.00 3.18
2845 3448 1.479323 GTTGGCCTCATAGTGACGGTA 59.521 52.381 3.32 0.00 0.00 4.02
2846 3449 0.249398 GTTGGCCTCATAGTGACGGT 59.751 55.000 3.32 0.00 0.00 4.83
2847 3450 0.537188 AGTTGGCCTCATAGTGACGG 59.463 55.000 3.32 0.00 0.00 4.79
2848 3451 1.471676 GGAGTTGGCCTCATAGTGACG 60.472 57.143 3.32 0.00 42.40 4.35
2849 3452 1.555075 TGGAGTTGGCCTCATAGTGAC 59.445 52.381 3.32 0.00 42.40 3.67
2850 3453 1.555075 GTGGAGTTGGCCTCATAGTGA 59.445 52.381 3.32 0.00 42.40 3.41
2851 3454 1.407437 GGTGGAGTTGGCCTCATAGTG 60.407 57.143 3.32 0.00 42.40 2.74
2852 3455 0.912486 GGTGGAGTTGGCCTCATAGT 59.088 55.000 3.32 0.00 42.40 2.12
2853 3456 0.179073 CGGTGGAGTTGGCCTCATAG 60.179 60.000 3.32 0.00 42.40 2.23
2854 3457 0.907704 ACGGTGGAGTTGGCCTCATA 60.908 55.000 3.32 0.00 42.40 2.15
2855 3458 2.224159 ACGGTGGAGTTGGCCTCAT 61.224 57.895 3.32 0.00 42.40 2.90
2856 3459 2.847234 ACGGTGGAGTTGGCCTCA 60.847 61.111 3.32 0.00 42.40 3.86
2857 3460 2.358737 CACGGTGGAGTTGGCCTC 60.359 66.667 3.32 0.00 39.67 4.70
2858 3461 4.643387 GCACGGTGGAGTTGGCCT 62.643 66.667 10.60 0.00 0.00 5.19
2860 3463 4.980805 TCGCACGGTGGAGTTGGC 62.981 66.667 10.60 0.00 0.00 4.52
2861 3464 3.041940 GTCGCACGGTGGAGTTGG 61.042 66.667 10.60 0.00 0.00 3.77
2862 3465 3.041940 GGTCGCACGGTGGAGTTG 61.042 66.667 10.60 0.00 0.00 3.16
2863 3466 4.309950 GGGTCGCACGGTGGAGTT 62.310 66.667 10.60 0.00 0.00 3.01
2864 3467 3.873679 TAGGGTCGCACGGTGGAGT 62.874 63.158 10.60 0.00 0.00 3.85
2865 3468 2.162338 TTTAGGGTCGCACGGTGGAG 62.162 60.000 10.60 0.00 0.00 3.86
2866 3469 2.208619 TTTAGGGTCGCACGGTGGA 61.209 57.895 10.60 2.81 0.00 4.02
2867 3470 2.030958 GTTTAGGGTCGCACGGTGG 61.031 63.158 10.60 0.26 0.00 4.61
2868 3471 2.377310 CGTTTAGGGTCGCACGGTG 61.377 63.158 3.15 3.15 0.00 4.94
2869 3472 2.048877 CGTTTAGGGTCGCACGGT 60.049 61.111 0.00 0.00 0.00 4.83
2870 3473 2.812178 CCGTTTAGGGTCGCACGG 60.812 66.667 3.40 3.40 45.75 4.94
2871 3474 2.090524 GTCCGTTTAGGGTCGCACG 61.091 63.158 0.00 0.00 41.52 5.34
2872 3475 2.090524 CGTCCGTTTAGGGTCGCAC 61.091 63.158 0.00 0.00 41.52 5.34
2873 3476 2.259204 CGTCCGTTTAGGGTCGCA 59.741 61.111 0.00 0.00 41.52 5.10
2874 3477 2.507769 CCGTCCGTTTAGGGTCGC 60.508 66.667 3.23 0.00 41.52 5.19
2875 3478 2.507769 GCCGTCCGTTTAGGGTCG 60.508 66.667 1.99 1.99 41.52 4.79
2876 3479 2.125391 GGCCGTCCGTTTAGGGTC 60.125 66.667 0.00 0.00 41.52 4.46
2886 3489 3.719144 CGGACAAAACGGCCGTCC 61.719 66.667 34.29 26.17 44.79 4.79
2887 3490 3.719144 CCGGACAAAACGGCCGTC 61.719 66.667 34.29 18.87 45.34 4.79
2893 3496 2.139917 TGACAGAATCCGGACAAAACG 58.860 47.619 6.12 0.00 0.00 3.60
2894 3497 3.139077 ACTGACAGAATCCGGACAAAAC 58.861 45.455 6.12 0.00 0.00 2.43
2895 3498 3.485463 ACTGACAGAATCCGGACAAAA 57.515 42.857 6.12 0.00 0.00 2.44
2896 3499 3.485463 AACTGACAGAATCCGGACAAA 57.515 42.857 6.12 0.00 0.00 2.83
2897 3500 3.138304 CAAACTGACAGAATCCGGACAA 58.862 45.455 6.12 0.00 0.00 3.18
2898 3501 2.549992 CCAAACTGACAGAATCCGGACA 60.550 50.000 6.12 0.00 0.00 4.02
2899 3502 2.076863 CCAAACTGACAGAATCCGGAC 58.923 52.381 6.12 0.00 0.00 4.79
2900 3503 1.003118 CCCAAACTGACAGAATCCGGA 59.997 52.381 6.61 6.61 0.00 5.14
2901 3504 1.271379 ACCCAAACTGACAGAATCCGG 60.271 52.381 10.08 0.00 0.00 5.14
2902 3505 2.185004 ACCCAAACTGACAGAATCCG 57.815 50.000 10.08 0.00 0.00 4.18
2903 3506 3.610911 CCTACCCAAACTGACAGAATCC 58.389 50.000 10.08 0.00 0.00 3.01
2904 3507 3.610911 CCCTACCCAAACTGACAGAATC 58.389 50.000 10.08 0.00 0.00 2.52
2905 3508 2.290960 GCCCTACCCAAACTGACAGAAT 60.291 50.000 10.08 0.00 0.00 2.40
2906 3509 1.073284 GCCCTACCCAAACTGACAGAA 59.927 52.381 10.08 0.00 0.00 3.02
2907 3510 0.690762 GCCCTACCCAAACTGACAGA 59.309 55.000 10.08 0.00 0.00 3.41
2908 3511 0.673644 CGCCCTACCCAAACTGACAG 60.674 60.000 0.00 0.00 0.00 3.51
2909 3512 1.122632 TCGCCCTACCCAAACTGACA 61.123 55.000 0.00 0.00 0.00 3.58
2910 3513 0.252197 ATCGCCCTACCCAAACTGAC 59.748 55.000 0.00 0.00 0.00 3.51
2911 3514 0.251916 CATCGCCCTACCCAAACTGA 59.748 55.000 0.00 0.00 0.00 3.41
2912 3515 0.251916 TCATCGCCCTACCCAAACTG 59.748 55.000 0.00 0.00 0.00 3.16
2913 3516 0.541863 CTCATCGCCCTACCCAAACT 59.458 55.000 0.00 0.00 0.00 2.66
2914 3517 0.463833 CCTCATCGCCCTACCCAAAC 60.464 60.000 0.00 0.00 0.00 2.93
2915 3518 0.912487 ACCTCATCGCCCTACCCAAA 60.912 55.000 0.00 0.00 0.00 3.28
2916 3519 1.306654 ACCTCATCGCCCTACCCAA 60.307 57.895 0.00 0.00 0.00 4.12
2917 3520 1.760875 GACCTCATCGCCCTACCCA 60.761 63.158 0.00 0.00 0.00 4.51
2918 3521 2.857744 CGACCTCATCGCCCTACCC 61.858 68.421 0.00 0.00 45.52 3.69
2919 3522 2.728817 CGACCTCATCGCCCTACC 59.271 66.667 0.00 0.00 45.52 3.18
2927 3530 2.494918 CCCGGACACGACCTCATC 59.505 66.667 0.73 0.00 44.60 2.92
2928 3531 3.771160 GCCCGGACACGACCTCAT 61.771 66.667 0.73 0.00 44.60 2.90
2933 3536 4.736896 GACAGGCCCGGACACGAC 62.737 72.222 0.73 0.00 44.60 4.34
2936 3539 4.394712 CAGGACAGGCCCGGACAC 62.395 72.222 0.73 0.00 37.37 3.67
2939 3542 4.414956 ATCCAGGACAGGCCCGGA 62.415 66.667 0.00 0.00 37.37 5.14
2940 3543 4.181010 CATCCAGGACAGGCCCGG 62.181 72.222 0.00 0.00 37.37 5.73
2941 3544 4.864334 GCATCCAGGACAGGCCCG 62.864 72.222 0.00 0.00 37.37 6.13
2942 3545 4.864334 CGCATCCAGGACAGGCCC 62.864 72.222 0.00 0.00 37.37 5.80
2943 3546 4.864334 CCGCATCCAGGACAGGCC 62.864 72.222 0.00 0.00 0.00 5.19
2944 3547 4.101448 ACCGCATCCAGGACAGGC 62.101 66.667 0.00 0.00 0.00 4.85
2945 3548 2.124983 CACCGCATCCAGGACAGG 60.125 66.667 0.00 0.00 0.00 4.00
2946 3549 2.124983 CCACCGCATCCAGGACAG 60.125 66.667 0.00 0.00 0.00 3.51
2947 3550 2.927856 ACCACCGCATCCAGGACA 60.928 61.111 0.00 0.00 0.00 4.02
2948 3551 2.125106 GACCACCGCATCCAGGAC 60.125 66.667 0.00 0.00 0.00 3.85
2949 3552 3.770040 CGACCACCGCATCCAGGA 61.770 66.667 0.00 0.00 0.00 3.86
2950 3553 4.082523 ACGACCACCGCATCCAGG 62.083 66.667 0.00 0.00 43.32 4.45
2951 3554 2.815211 CACGACCACCGCATCCAG 60.815 66.667 0.00 0.00 43.32 3.86
2996 3599 0.810031 AATGTACGCGGACAGGATGC 60.810 55.000 30.25 0.46 42.53 3.91
2997 3600 1.651987 AAATGTACGCGGACAGGATG 58.348 50.000 30.25 0.00 46.00 3.51
2998 3601 2.396590 AAAATGTACGCGGACAGGAT 57.603 45.000 30.25 15.55 31.51 3.24
2999 3602 2.070783 GAAAAATGTACGCGGACAGGA 58.929 47.619 30.25 6.34 31.51 3.86
3000 3603 2.073816 AGAAAAATGTACGCGGACAGG 58.926 47.619 30.25 0.00 31.51 4.00
3001 3604 3.806316 AAGAAAAATGTACGCGGACAG 57.194 42.857 30.25 0.00 31.51 3.51
3002 3605 3.850374 GCAAAGAAAAATGTACGCGGACA 60.850 43.478 29.06 29.06 0.00 4.02
3003 3606 2.655001 GCAAAGAAAAATGTACGCGGAC 59.345 45.455 16.44 16.44 0.00 4.79
3004 3607 2.290916 TGCAAAGAAAAATGTACGCGGA 59.709 40.909 12.47 0.00 0.00 5.54
3005 3608 2.656085 TGCAAAGAAAAATGTACGCGG 58.344 42.857 12.47 0.00 0.00 6.46
3033 3636 9.981114 ACCGAAAATAAATGATGAAAAGAAGTT 57.019 25.926 0.00 0.00 0.00 2.66
3042 3645 9.389755 TCTTCATGTACCGAAAATAAATGATGA 57.610 29.630 0.00 0.00 32.24 2.92
3050 3653 9.825109 TGATGTATTCTTCATGTACCGAAAATA 57.175 29.630 0.00 0.00 0.00 1.40
3051 3654 8.731275 TGATGTATTCTTCATGTACCGAAAAT 57.269 30.769 0.00 0.60 0.00 1.82
3052 3655 8.731275 ATGATGTATTCTTCATGTACCGAAAA 57.269 30.769 0.68 0.00 37.17 2.29
3053 3656 7.169140 CGATGATGTATTCTTCATGTACCGAAA 59.831 37.037 5.59 0.00 38.16 3.46
3054 3657 6.640907 CGATGATGTATTCTTCATGTACCGAA 59.359 38.462 5.59 0.00 38.16 4.30
3055 3658 6.149633 CGATGATGTATTCTTCATGTACCGA 58.850 40.000 5.59 0.00 38.16 4.69
3056 3659 5.164051 GCGATGATGTATTCTTCATGTACCG 60.164 44.000 5.59 4.71 38.16 4.02
3057 3660 5.696270 TGCGATGATGTATTCTTCATGTACC 59.304 40.000 5.59 0.00 38.16 3.34
3058 3661 6.769608 TGCGATGATGTATTCTTCATGTAC 57.230 37.500 5.59 0.00 38.16 2.90
3059 3662 7.967890 AATGCGATGATGTATTCTTCATGTA 57.032 32.000 5.59 0.44 38.16 2.29
3060 3663 6.872628 AATGCGATGATGTATTCTTCATGT 57.127 33.333 5.59 0.00 38.16 3.21
3061 3664 7.858879 TCAAAATGCGATGATGTATTCTTCATG 59.141 33.333 5.59 0.00 38.16 3.07
3062 3665 7.859377 GTCAAAATGCGATGATGTATTCTTCAT 59.141 33.333 1.05 1.05 39.87 2.57
3063 3666 7.066163 AGTCAAAATGCGATGATGTATTCTTCA 59.934 33.333 0.00 0.00 33.42 3.02
3064 3667 7.412853 AGTCAAAATGCGATGATGTATTCTTC 58.587 34.615 0.00 0.00 0.00 2.87
3065 3668 7.325660 AGTCAAAATGCGATGATGTATTCTT 57.674 32.000 0.00 0.00 0.00 2.52
3066 3669 6.932356 AGTCAAAATGCGATGATGTATTCT 57.068 33.333 0.00 0.00 0.00 2.40
3067 3670 7.855545 ACTAGTCAAAATGCGATGATGTATTC 58.144 34.615 0.00 0.00 0.00 1.75
3068 3671 7.792374 ACTAGTCAAAATGCGATGATGTATT 57.208 32.000 0.00 0.00 0.00 1.89
3069 3672 8.887036 TTACTAGTCAAAATGCGATGATGTAT 57.113 30.769 0.00 0.00 0.00 2.29
3070 3673 8.710835 TTTACTAGTCAAAATGCGATGATGTA 57.289 30.769 0.00 0.00 0.00 2.29
3071 3674 7.334421 ACTTTACTAGTCAAAATGCGATGATGT 59.666 33.333 0.00 0.00 28.23 3.06
3072 3675 7.688372 ACTTTACTAGTCAAAATGCGATGATG 58.312 34.615 0.00 0.00 28.23 3.07
3073 3676 7.849804 ACTTTACTAGTCAAAATGCGATGAT 57.150 32.000 0.00 0.00 28.23 2.45
3074 3677 8.766000 TTACTTTACTAGTCAAAATGCGATGA 57.234 30.769 0.00 0.00 38.33 2.92
3075 3678 8.869897 TCTTACTTTACTAGTCAAAATGCGATG 58.130 33.333 0.00 0.00 38.33 3.84
3076 3679 8.870879 GTCTTACTTTACTAGTCAAAATGCGAT 58.129 33.333 0.00 0.00 38.33 4.58
3077 3680 7.330208 GGTCTTACTTTACTAGTCAAAATGCGA 59.670 37.037 0.00 0.00 38.33 5.10
3078 3681 7.412672 GGGTCTTACTTTACTAGTCAAAATGCG 60.413 40.741 0.00 0.00 38.33 4.73
3079 3682 7.389607 TGGGTCTTACTTTACTAGTCAAAATGC 59.610 37.037 0.00 0.00 38.33 3.56
3080 3683 8.842358 TGGGTCTTACTTTACTAGTCAAAATG 57.158 34.615 0.00 0.00 38.33 2.32
3081 3684 9.856162 TTTGGGTCTTACTTTACTAGTCAAAAT 57.144 29.630 0.00 0.00 38.33 1.82
3082 3685 9.683870 TTTTGGGTCTTACTTTACTAGTCAAAA 57.316 29.630 0.00 2.77 38.33 2.44
3083 3686 9.683870 TTTTTGGGTCTTACTTTACTAGTCAAA 57.316 29.630 0.00 0.00 38.33 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.