Multiple sequence alignment - TraesCS5D01G336100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G336100 chr5D 100.000 4227 0 0 1 4227 425655422 425651196 0.000000e+00 7806.0
1 TraesCS5D01G336100 chr5D 83.706 626 71 19 2402 3025 425717896 425717300 2.850000e-156 562.0
2 TraesCS5D01G336100 chr5D 89.074 421 39 3 1941 2361 425718443 425718030 2.250000e-142 516.0
3 TraesCS5D01G336100 chr5D 83.678 435 55 7 1456 1890 425718875 425718457 3.060000e-106 396.0
4 TraesCS5D01G336100 chr5D 85.714 56 6 2 248 302 298064616 298064670 1.640000e-04 58.4
5 TraesCS5D01G336100 chr5A 94.863 1129 44 6 1948 3072 539947313 539946195 0.000000e+00 1751.0
6 TraesCS5D01G336100 chr5A 93.478 1150 39 14 3087 4226 539946126 539945003 0.000000e+00 1676.0
7 TraesCS5D01G336100 chr5A 85.733 778 87 14 1942 2718 539957883 539957129 0.000000e+00 800.0
8 TraesCS5D01G336100 chr5A 89.796 441 34 5 1444 1882 539947767 539947336 4.780000e-154 555.0
9 TraesCS5D01G336100 chr5A 80.882 340 43 11 2753 3077 539957132 539956800 9.080000e-62 248.0
10 TraesCS5D01G336100 chr5B 92.168 881 58 5 1475 2352 514855112 514854240 0.000000e+00 1234.0
11 TraesCS5D01G336100 chr5B 97.664 642 15 0 3586 4227 514853603 514852962 0.000000e+00 1103.0
12 TraesCS5D01G336100 chr5B 84.651 1088 116 31 1941 3025 514929691 514928652 0.000000e+00 1037.0
13 TraesCS5D01G336100 chr5B 81.696 1038 96 43 244 1199 514856165 514855140 0.000000e+00 778.0
14 TraesCS5D01G336100 chr5B 88.766 632 54 9 2402 3020 514854231 514853604 0.000000e+00 758.0
15 TraesCS5D01G336100 chr5B 83.447 441 57 7 1456 1896 514930123 514929699 3.060000e-106 396.0
16 TraesCS5D01G336100 chr4A 84.186 215 27 4 1441 1653 540573750 540573959 7.170000e-48 202.0
17 TraesCS5D01G336100 chr4A 87.671 73 9 0 500 572 581267338 581267266 7.530000e-13 86.1
18 TraesCS5D01G336100 chr6B 80.364 275 45 9 192 460 526040280 526040009 2.580000e-47 200.0
19 TraesCS5D01G336100 chr6B 82.759 87 10 5 500 584 526039990 526039907 5.860000e-09 73.1
20 TraesCS5D01G336100 chr6D 75.155 483 78 29 118 574 352872786 352873252 5.580000e-44 189.0
21 TraesCS5D01G336100 chr6A 78.235 170 31 6 116 280 490454212 490454380 2.080000e-18 104.0
22 TraesCS5D01G336100 chr6A 77.059 170 33 6 116 280 490431743 490431911 4.500000e-15 93.5
23 TraesCS5D01G336100 chr4B 87.671 73 9 0 500 572 32267354 32267426 7.530000e-13 86.1
24 TraesCS5D01G336100 chr3A 95.745 47 2 0 543 589 719325442 719325396 4.530000e-10 76.8
25 TraesCS5D01G336100 chr3A 91.111 45 4 0 278 322 117319057 117319101 1.270000e-05 62.1
26 TraesCS5D01G336100 chr3D 93.750 48 3 0 543 590 589400383 589400336 5.860000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G336100 chr5D 425651196 425655422 4226 True 7806.000000 7806 100.000000 1 4227 1 chr5D.!!$R1 4226
1 TraesCS5D01G336100 chr5D 425717300 425718875 1575 True 491.333333 562 85.486000 1456 3025 3 chr5D.!!$R2 1569
2 TraesCS5D01G336100 chr5A 539945003 539947767 2764 True 1327.333333 1751 92.712333 1444 4226 3 chr5A.!!$R1 2782
3 TraesCS5D01G336100 chr5A 539956800 539957883 1083 True 524.000000 800 83.307500 1942 3077 2 chr5A.!!$R2 1135
4 TraesCS5D01G336100 chr5B 514852962 514856165 3203 True 968.250000 1234 90.073500 244 4227 4 chr5B.!!$R1 3983
5 TraesCS5D01G336100 chr5B 514928652 514930123 1471 True 716.500000 1037 84.049000 1456 3025 2 chr5B.!!$R2 1569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.029567 GACTAGCCGACGGACAGATG 59.970 60.0 20.50 3.21 0.00 2.90 F
143 144 0.034896 CCCTCAAAGCGCCCGTATAT 59.965 55.0 2.29 0.00 0.00 0.86 F
1299 1395 0.028770 AACCACGCGACATTGTTGTG 59.971 50.0 15.93 14.68 35.79 3.33 F
1303 1399 0.303493 ACGCGACATTGTTGTGTGAC 59.697 50.0 19.90 0.00 38.95 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1280 1376 0.028770 CACAACAATGTCGCGTGGTT 59.971 50.0 5.77 1.87 37.82 3.67 R
1581 1679 0.109132 CAACAGGCCTTTTCGATGCC 60.109 55.0 0.00 7.48 45.70 4.40 R
3025 3252 0.032678 CGAACCCTCATGCGCTAGAT 59.967 55.0 9.73 0.00 0.00 1.98 R
3276 3569 1.580815 GGTTGTTTTGTGCCATGGTG 58.419 50.0 14.67 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.987890 AGTTCCAATTGTTGTTTAAATGTATGC 58.012 29.630 4.43 0.00 0.00 3.14
29 30 7.573916 TCCAATTGTTGTTTAAATGTATGCG 57.426 32.000 4.43 0.00 0.00 4.73
30 31 7.148641 TCCAATTGTTGTTTAAATGTATGCGT 58.851 30.769 4.43 0.00 0.00 5.24
31 32 7.115520 TCCAATTGTTGTTTAAATGTATGCGTG 59.884 33.333 4.43 0.00 0.00 5.34
32 33 7.095857 CCAATTGTTGTTTAAATGTATGCGTGT 60.096 33.333 4.43 0.00 0.00 4.49
33 34 8.906693 CAATTGTTGTTTAAATGTATGCGTGTA 58.093 29.630 0.00 0.00 0.00 2.90
34 35 8.667987 ATTGTTGTTTAAATGTATGCGTGTAG 57.332 30.769 0.00 0.00 0.00 2.74
46 47 3.217242 CGTGTAGCATGGGATAGCC 57.783 57.895 0.00 0.00 0.00 3.93
47 48 0.667487 CGTGTAGCATGGGATAGCCG 60.667 60.000 0.00 0.00 33.83 5.52
48 49 0.320771 GTGTAGCATGGGATAGCCGG 60.321 60.000 0.00 0.00 33.83 6.13
49 50 1.376037 GTAGCATGGGATAGCCGGC 60.376 63.158 21.89 21.89 33.83 6.13
50 51 1.536418 TAGCATGGGATAGCCGGCT 60.536 57.895 34.85 34.85 39.23 5.52
51 52 1.544825 TAGCATGGGATAGCCGGCTC 61.545 60.000 36.73 20.78 37.70 4.70
52 53 2.348998 CATGGGATAGCCGGCTCC 59.651 66.667 36.73 28.99 33.83 4.70
56 57 3.161450 GGATAGCCGGCTCCCACA 61.161 66.667 36.73 16.80 0.00 4.17
57 58 2.520536 GGATAGCCGGCTCCCACAT 61.521 63.158 36.73 21.58 0.00 3.21
58 59 1.451936 GATAGCCGGCTCCCACATT 59.548 57.895 36.73 9.44 0.00 2.71
59 60 0.603975 GATAGCCGGCTCCCACATTC 60.604 60.000 36.73 15.17 0.00 2.67
60 61 2.383245 ATAGCCGGCTCCCACATTCG 62.383 60.000 36.73 0.00 0.00 3.34
61 62 4.778143 GCCGGCTCCCACATTCGT 62.778 66.667 22.15 0.00 0.00 3.85
62 63 2.819595 CCGGCTCCCACATTCGTG 60.820 66.667 0.00 0.00 43.21 4.35
63 64 2.047274 CGGCTCCCACATTCGTGT 60.047 61.111 0.00 0.00 41.93 4.49
64 65 2.100631 CGGCTCCCACATTCGTGTC 61.101 63.158 0.00 0.00 41.93 3.67
65 66 1.745489 GGCTCCCACATTCGTGTCC 60.745 63.158 0.00 0.00 41.93 4.02
66 67 2.100631 GCTCCCACATTCGTGTCCG 61.101 63.158 0.00 0.00 41.93 4.79
67 68 1.292223 CTCCCACATTCGTGTCCGT 59.708 57.895 0.00 0.00 41.93 4.69
68 69 1.005512 TCCCACATTCGTGTCCGTG 60.006 57.895 0.00 0.00 41.93 4.94
69 70 2.032634 CCCACATTCGTGTCCGTGG 61.033 63.158 0.00 0.00 46.93 4.94
70 71 4.665431 CACATTCGTGTCCGTGGA 57.335 55.556 0.00 0.00 38.41 4.02
71 72 2.150424 CACATTCGTGTCCGTGGAC 58.850 57.895 12.17 12.17 44.77 4.02
72 73 0.319555 CACATTCGTGTCCGTGGACT 60.320 55.000 19.17 0.00 44.80 3.85
73 74 1.068125 CACATTCGTGTCCGTGGACTA 60.068 52.381 19.17 4.12 44.80 2.59
74 75 1.201647 ACATTCGTGTCCGTGGACTAG 59.798 52.381 19.17 12.87 44.80 2.57
75 76 0.172803 ATTCGTGTCCGTGGACTAGC 59.827 55.000 19.17 9.08 44.80 3.42
76 77 1.870055 TTCGTGTCCGTGGACTAGCC 61.870 60.000 19.17 4.92 44.80 3.93
77 78 2.181021 GTGTCCGTGGACTAGCCG 59.819 66.667 19.17 0.00 44.80 5.52
78 79 2.034532 TGTCCGTGGACTAGCCGA 59.965 61.111 19.17 0.00 44.80 5.54
79 80 2.338015 TGTCCGTGGACTAGCCGAC 61.338 63.158 19.17 0.00 44.80 4.79
80 81 3.129502 TCCGTGGACTAGCCGACG 61.130 66.667 6.62 6.62 40.66 5.12
81 82 4.189188 CCGTGGACTAGCCGACGG 62.189 72.222 17.36 17.36 46.81 4.79
82 83 3.129502 CGTGGACTAGCCGACGGA 61.130 66.667 20.50 0.00 40.66 4.69
83 84 2.488820 GTGGACTAGCCGACGGAC 59.511 66.667 20.50 9.27 40.66 4.79
84 85 2.034532 TGGACTAGCCGACGGACA 59.965 61.111 20.50 2.46 40.66 4.02
85 86 2.044555 TGGACTAGCCGACGGACAG 61.045 63.158 20.50 15.51 40.66 3.51
86 87 1.748122 GGACTAGCCGACGGACAGA 60.748 63.158 20.50 0.00 0.00 3.41
87 88 1.102222 GGACTAGCCGACGGACAGAT 61.102 60.000 20.50 4.24 0.00 2.90
88 89 0.029567 GACTAGCCGACGGACAGATG 59.970 60.000 20.50 3.21 0.00 2.90
89 90 1.299468 CTAGCCGACGGACAGATGC 60.299 63.158 20.50 0.00 0.00 3.91
90 91 2.990674 CTAGCCGACGGACAGATGCG 62.991 65.000 20.50 0.00 46.59 4.73
92 93 4.873129 CCGACGGACAGATGCGGG 62.873 72.222 8.64 0.00 45.25 6.13
93 94 3.822192 CGACGGACAGATGCGGGA 61.822 66.667 0.00 0.00 45.25 5.14
94 95 2.105128 GACGGACAGATGCGGGAG 59.895 66.667 0.00 0.00 45.25 4.30
95 96 3.432051 GACGGACAGATGCGGGAGG 62.432 68.421 0.00 0.00 45.25 4.30
96 97 3.147595 CGGACAGATGCGGGAGGA 61.148 66.667 0.00 0.00 35.75 3.71
97 98 2.721167 CGGACAGATGCGGGAGGAA 61.721 63.158 0.00 0.00 35.75 3.36
98 99 1.602237 GGACAGATGCGGGAGGAAA 59.398 57.895 0.00 0.00 0.00 3.13
99 100 0.181350 GGACAGATGCGGGAGGAAAT 59.819 55.000 0.00 0.00 0.00 2.17
100 101 1.408822 GGACAGATGCGGGAGGAAATT 60.409 52.381 0.00 0.00 0.00 1.82
101 102 2.369394 GACAGATGCGGGAGGAAATTT 58.631 47.619 0.00 0.00 0.00 1.82
102 103 2.094675 ACAGATGCGGGAGGAAATTTG 58.905 47.619 0.00 0.00 0.00 2.32
103 104 1.406539 CAGATGCGGGAGGAAATTTGG 59.593 52.381 0.00 0.00 0.00 3.28
104 105 1.284785 AGATGCGGGAGGAAATTTGGA 59.715 47.619 0.00 0.00 0.00 3.53
105 106 1.678101 GATGCGGGAGGAAATTTGGAG 59.322 52.381 0.00 0.00 0.00 3.86
106 107 0.323360 TGCGGGAGGAAATTTGGAGG 60.323 55.000 0.00 0.00 0.00 4.30
107 108 0.323451 GCGGGAGGAAATTTGGAGGT 60.323 55.000 0.00 0.00 0.00 3.85
108 109 1.751437 CGGGAGGAAATTTGGAGGTC 58.249 55.000 0.00 0.00 0.00 3.85
109 110 1.751437 GGGAGGAAATTTGGAGGTCG 58.249 55.000 0.00 0.00 0.00 4.79
110 111 1.095600 GGAGGAAATTTGGAGGTCGC 58.904 55.000 0.00 0.00 0.00 5.19
111 112 1.613255 GGAGGAAATTTGGAGGTCGCA 60.613 52.381 0.00 0.00 0.00 5.10
112 113 1.468914 GAGGAAATTTGGAGGTCGCAC 59.531 52.381 0.00 0.00 0.00 5.34
113 114 0.526211 GGAAATTTGGAGGTCGCACC 59.474 55.000 0.00 0.00 38.99 5.01
122 123 3.744559 GGTCGCACCTTCAAAGCA 58.255 55.556 0.00 0.00 34.73 3.91
123 124 2.029743 GGTCGCACCTTCAAAGCAA 58.970 52.632 0.00 0.00 34.73 3.91
124 125 0.317854 GGTCGCACCTTCAAAGCAAC 60.318 55.000 0.00 0.00 34.73 4.17
125 126 0.317854 GTCGCACCTTCAAAGCAACC 60.318 55.000 0.00 0.00 0.00 3.77
126 127 1.007387 CGCACCTTCAAAGCAACCC 60.007 57.895 0.00 0.00 0.00 4.11
127 128 1.455383 CGCACCTTCAAAGCAACCCT 61.455 55.000 0.00 0.00 0.00 4.34
128 129 0.315251 GCACCTTCAAAGCAACCCTC 59.685 55.000 0.00 0.00 0.00 4.30
129 130 1.691196 CACCTTCAAAGCAACCCTCA 58.309 50.000 0.00 0.00 0.00 3.86
130 131 2.031120 CACCTTCAAAGCAACCCTCAA 58.969 47.619 0.00 0.00 0.00 3.02
131 132 2.430332 CACCTTCAAAGCAACCCTCAAA 59.570 45.455 0.00 0.00 0.00 2.69
132 133 2.695147 ACCTTCAAAGCAACCCTCAAAG 59.305 45.455 0.00 0.00 0.00 2.77
133 134 2.546584 CCTTCAAAGCAACCCTCAAAGC 60.547 50.000 0.00 0.00 0.00 3.51
134 135 0.667993 TCAAAGCAACCCTCAAAGCG 59.332 50.000 0.00 0.00 0.00 4.68
135 136 0.940991 CAAAGCAACCCTCAAAGCGC 60.941 55.000 0.00 0.00 0.00 5.92
136 137 2.087462 AAAGCAACCCTCAAAGCGCC 62.087 55.000 2.29 0.00 0.00 6.53
137 138 4.056125 GCAACCCTCAAAGCGCCC 62.056 66.667 2.29 0.00 0.00 6.13
138 139 3.737172 CAACCCTCAAAGCGCCCG 61.737 66.667 2.29 0.00 0.00 6.13
139 140 4.265056 AACCCTCAAAGCGCCCGT 62.265 61.111 2.29 0.00 0.00 5.28
140 141 2.886134 AACCCTCAAAGCGCCCGTA 61.886 57.895 2.29 0.00 0.00 4.02
141 142 2.189521 CCCTCAAAGCGCCCGTAT 59.810 61.111 2.29 0.00 0.00 3.06
142 143 1.332144 ACCCTCAAAGCGCCCGTATA 61.332 55.000 2.29 0.00 0.00 1.47
143 144 0.034896 CCCTCAAAGCGCCCGTATAT 59.965 55.000 2.29 0.00 0.00 0.86
144 145 1.148310 CCTCAAAGCGCCCGTATATG 58.852 55.000 2.29 0.00 0.00 1.78
145 146 1.540363 CCTCAAAGCGCCCGTATATGT 60.540 52.381 2.29 0.00 0.00 2.29
146 147 1.792949 CTCAAAGCGCCCGTATATGTC 59.207 52.381 2.29 0.00 0.00 3.06
147 148 1.411246 TCAAAGCGCCCGTATATGTCT 59.589 47.619 2.29 0.00 0.00 3.41
148 149 1.792949 CAAAGCGCCCGTATATGTCTC 59.207 52.381 2.29 0.00 0.00 3.36
149 150 0.039437 AAGCGCCCGTATATGTCTCG 60.039 55.000 2.29 0.00 0.00 4.04
150 151 1.170919 AGCGCCCGTATATGTCTCGT 61.171 55.000 2.29 0.00 0.00 4.18
151 152 0.728466 GCGCCCGTATATGTCTCGTC 60.728 60.000 0.00 0.00 0.00 4.20
152 153 0.109873 CGCCCGTATATGTCTCGTCC 60.110 60.000 0.00 0.00 0.00 4.79
153 154 0.109873 GCCCGTATATGTCTCGTCCG 60.110 60.000 0.00 0.00 0.00 4.79
154 155 0.109873 CCCGTATATGTCTCGTCCGC 60.110 60.000 0.00 0.00 0.00 5.54
155 156 0.589708 CCGTATATGTCTCGTCCGCA 59.410 55.000 0.00 0.00 0.00 5.69
156 157 1.002142 CCGTATATGTCTCGTCCGCAA 60.002 52.381 0.00 0.00 0.00 4.85
157 158 2.351447 CCGTATATGTCTCGTCCGCAAT 60.351 50.000 0.00 0.00 0.00 3.56
158 159 2.656897 CGTATATGTCTCGTCCGCAATG 59.343 50.000 0.00 0.00 0.00 2.82
159 160 2.890808 ATATGTCTCGTCCGCAATGT 57.109 45.000 0.00 0.00 0.00 2.71
160 161 2.665649 TATGTCTCGTCCGCAATGTT 57.334 45.000 0.00 0.00 0.00 2.71
161 162 1.808411 ATGTCTCGTCCGCAATGTTT 58.192 45.000 0.00 0.00 0.00 2.83
162 163 2.442212 TGTCTCGTCCGCAATGTTTA 57.558 45.000 0.00 0.00 0.00 2.01
163 164 2.063266 TGTCTCGTCCGCAATGTTTAC 58.937 47.619 0.00 0.00 0.00 2.01
164 165 2.063266 GTCTCGTCCGCAATGTTTACA 58.937 47.619 0.00 0.00 0.00 2.41
165 166 2.671396 GTCTCGTCCGCAATGTTTACAT 59.329 45.455 0.00 0.00 38.41 2.29
166 167 2.927477 TCTCGTCCGCAATGTTTACATC 59.073 45.455 0.00 0.00 35.10 3.06
167 168 2.670905 CTCGTCCGCAATGTTTACATCA 59.329 45.455 0.00 0.00 35.10 3.07
168 169 2.413796 TCGTCCGCAATGTTTACATCAC 59.586 45.455 0.00 0.00 35.10 3.06
169 170 2.415168 CGTCCGCAATGTTTACATCACT 59.585 45.455 0.00 0.00 35.10 3.41
170 171 3.120338 CGTCCGCAATGTTTACATCACTT 60.120 43.478 0.00 0.00 35.10 3.16
171 172 4.612712 CGTCCGCAATGTTTACATCACTTT 60.613 41.667 0.00 0.00 35.10 2.66
172 173 5.219633 GTCCGCAATGTTTACATCACTTTT 58.780 37.500 0.00 0.00 35.10 2.27
173 174 5.116983 GTCCGCAATGTTTACATCACTTTTG 59.883 40.000 0.00 0.00 35.10 2.44
174 175 4.143347 CCGCAATGTTTACATCACTTTTGC 60.143 41.667 6.57 6.57 35.10 3.68
175 176 4.681025 CGCAATGTTTACATCACTTTTGCT 59.319 37.500 12.18 0.00 35.10 3.91
176 177 5.855925 CGCAATGTTTACATCACTTTTGCTA 59.144 36.000 12.18 0.00 35.10 3.49
177 178 6.527722 CGCAATGTTTACATCACTTTTGCTAT 59.472 34.615 12.18 0.00 35.10 2.97
178 179 7.253420 CGCAATGTTTACATCACTTTTGCTATC 60.253 37.037 12.18 0.00 35.10 2.08
179 180 7.009540 GCAATGTTTACATCACTTTTGCTATCC 59.990 37.037 8.56 0.00 35.10 2.59
180 181 7.701539 ATGTTTACATCACTTTTGCTATCCA 57.298 32.000 0.00 0.00 28.78 3.41
181 182 7.517614 TGTTTACATCACTTTTGCTATCCAA 57.482 32.000 0.00 0.00 0.00 3.53
182 183 7.367285 TGTTTACATCACTTTTGCTATCCAAC 58.633 34.615 0.00 0.00 31.97 3.77
183 184 4.685169 ACATCACTTTTGCTATCCAACG 57.315 40.909 0.00 0.00 31.97 4.10
184 185 3.440173 ACATCACTTTTGCTATCCAACGG 59.560 43.478 0.00 0.00 31.97 4.44
185 186 2.432444 TCACTTTTGCTATCCAACGGG 58.568 47.619 0.00 0.00 31.97 5.28
186 187 2.159382 CACTTTTGCTATCCAACGGGT 58.841 47.619 0.00 0.00 31.97 5.28
187 188 2.161609 CACTTTTGCTATCCAACGGGTC 59.838 50.000 0.00 0.00 31.97 4.46
188 189 1.743394 CTTTTGCTATCCAACGGGTCC 59.257 52.381 0.00 0.00 31.97 4.46
189 190 0.693622 TTTGCTATCCAACGGGTCCA 59.306 50.000 0.00 0.00 31.97 4.02
190 191 0.035820 TTGCTATCCAACGGGTCCAC 60.036 55.000 0.00 0.00 34.93 4.02
191 192 0.907704 TGCTATCCAACGGGTCCACT 60.908 55.000 0.00 0.00 34.93 4.00
192 193 1.117150 GCTATCCAACGGGTCCACTA 58.883 55.000 0.00 0.00 34.93 2.74
193 194 1.483415 GCTATCCAACGGGTCCACTAA 59.517 52.381 0.00 0.00 34.93 2.24
194 195 2.093341 GCTATCCAACGGGTCCACTAAA 60.093 50.000 0.00 0.00 34.93 1.85
195 196 3.433173 GCTATCCAACGGGTCCACTAAAT 60.433 47.826 0.00 0.00 34.93 1.40
196 197 2.483014 TCCAACGGGTCCACTAAATG 57.517 50.000 0.00 0.00 34.93 2.32
197 198 1.700739 TCCAACGGGTCCACTAAATGT 59.299 47.619 0.00 0.00 34.93 2.71
198 199 2.081462 CCAACGGGTCCACTAAATGTC 58.919 52.381 0.00 0.00 0.00 3.06
199 200 2.081462 CAACGGGTCCACTAAATGTCC 58.919 52.381 0.00 0.00 0.00 4.02
200 201 0.248289 ACGGGTCCACTAAATGTCCG 59.752 55.000 0.00 0.00 39.15 4.79
201 202 1.087771 CGGGTCCACTAAATGTCCGC 61.088 60.000 0.00 0.00 31.11 5.54
202 203 1.087771 GGGTCCACTAAATGTCCGCG 61.088 60.000 0.00 0.00 0.00 6.46
203 204 1.087771 GGTCCACTAAATGTCCGCGG 61.088 60.000 22.12 22.12 0.00 6.46
204 205 0.108520 GTCCACTAAATGTCCGCGGA 60.109 55.000 27.28 27.28 0.00 5.54
205 206 0.108520 TCCACTAAATGTCCGCGGAC 60.109 55.000 43.88 43.88 44.77 4.79
206 207 0.108329 CCACTAAATGTCCGCGGACT 60.108 55.000 46.72 34.18 44.80 3.85
207 208 1.135527 CCACTAAATGTCCGCGGACTA 59.864 52.381 46.72 35.80 44.80 2.59
208 209 2.460918 CACTAAATGTCCGCGGACTAG 58.539 52.381 46.72 39.80 44.80 2.57
209 210 2.097825 ACTAAATGTCCGCGGACTAGT 58.902 47.619 46.72 40.35 44.80 2.57
210 211 2.098770 ACTAAATGTCCGCGGACTAGTC 59.901 50.000 46.72 28.72 44.80 2.59
211 212 0.175073 AAATGTCCGCGGACTAGTCC 59.825 55.000 46.72 29.18 44.80 3.85
220 221 3.650409 GGACTAGTCCGCATGTCTG 57.350 57.895 25.83 0.00 40.36 3.51
221 222 1.103803 GGACTAGTCCGCATGTCTGA 58.896 55.000 25.83 0.00 40.36 3.27
222 223 1.476891 GGACTAGTCCGCATGTCTGAA 59.523 52.381 25.83 0.00 40.36 3.02
223 224 2.480416 GGACTAGTCCGCATGTCTGAAG 60.480 54.545 25.83 0.00 40.36 3.02
224 225 2.164624 GACTAGTCCGCATGTCTGAAGT 59.835 50.000 12.13 0.00 0.00 3.01
225 226 2.563179 ACTAGTCCGCATGTCTGAAGTT 59.437 45.455 0.00 0.00 0.00 2.66
226 227 2.086054 AGTCCGCATGTCTGAAGTTC 57.914 50.000 0.00 0.00 0.00 3.01
227 228 0.716108 GTCCGCATGTCTGAAGTTCG 59.284 55.000 0.00 0.00 0.00 3.95
228 229 0.601057 TCCGCATGTCTGAAGTTCGA 59.399 50.000 0.00 0.00 0.00 3.71
229 230 1.204704 TCCGCATGTCTGAAGTTCGAT 59.795 47.619 0.00 0.00 0.00 3.59
230 231 2.425668 TCCGCATGTCTGAAGTTCGATA 59.574 45.455 0.00 0.00 0.00 2.92
231 232 3.068165 TCCGCATGTCTGAAGTTCGATAT 59.932 43.478 0.00 0.53 0.00 1.63
232 233 4.277423 TCCGCATGTCTGAAGTTCGATATA 59.723 41.667 0.00 0.00 0.00 0.86
233 234 4.383052 CCGCATGTCTGAAGTTCGATATAC 59.617 45.833 0.00 0.00 0.00 1.47
234 235 5.215903 CGCATGTCTGAAGTTCGATATACT 58.784 41.667 0.00 0.00 0.00 2.12
235 236 6.371389 CGCATGTCTGAAGTTCGATATACTA 58.629 40.000 0.00 0.00 0.00 1.82
236 237 6.521477 CGCATGTCTGAAGTTCGATATACTAG 59.479 42.308 0.00 0.00 0.00 2.57
237 238 6.306837 GCATGTCTGAAGTTCGATATACTAGC 59.693 42.308 0.00 0.31 0.00 3.42
238 239 6.315091 TGTCTGAAGTTCGATATACTAGCC 57.685 41.667 0.00 0.00 0.00 3.93
239 240 5.049612 TGTCTGAAGTTCGATATACTAGCCG 60.050 44.000 0.00 0.00 0.00 5.52
240 241 4.083431 TCTGAAGTTCGATATACTAGCCGC 60.083 45.833 0.00 0.00 0.00 6.53
241 242 3.566742 TGAAGTTCGATATACTAGCCGCA 59.433 43.478 0.00 0.00 0.00 5.69
242 243 4.037089 TGAAGTTCGATATACTAGCCGCAA 59.963 41.667 0.00 0.00 0.00 4.85
259 260 1.852280 GCAAACTTGAGGACGTTTTGC 59.148 47.619 13.84 13.84 31.46 3.68
261 262 0.661020 AACTTGAGGACGTTTTGCGG 59.339 50.000 0.00 0.00 46.52 5.69
269 270 4.383602 CGTTTTGCGGGCGTCCAG 62.384 66.667 6.96 0.00 36.85 3.86
271 272 2.033448 TTTTGCGGGCGTCCAGAT 59.967 55.556 6.96 0.00 0.00 2.90
295 296 1.483827 TGCATGTCCAACCAAAAGCAA 59.516 42.857 0.00 0.00 0.00 3.91
303 304 0.459411 AACCAAAAGCAACCACGTGC 60.459 50.000 10.91 0.00 45.28 5.34
322 323 3.531821 CCCCCTCTCTTCTCTCTCC 57.468 63.158 0.00 0.00 0.00 3.71
323 324 0.633921 CCCCCTCTCTTCTCTCTCCA 59.366 60.000 0.00 0.00 0.00 3.86
326 327 1.341877 CCCTCTCTTCTCTCTCCAGCA 60.342 57.143 0.00 0.00 0.00 4.41
330 331 0.529833 TCTTCTCTCTCCAGCAAGCG 59.470 55.000 0.00 0.00 0.00 4.68
334 335 4.749310 CTCTCCAGCAAGCGCGGT 62.749 66.667 4.23 4.23 45.49 5.68
347 348 2.250939 CGCGGTGGAAGACAAGCAA 61.251 57.895 0.00 0.00 35.50 3.91
348 349 1.576421 GCGGTGGAAGACAAGCAAG 59.424 57.895 0.00 0.00 35.74 4.01
352 361 0.514691 GTGGAAGACAAGCAAGCTCG 59.485 55.000 0.00 0.00 0.00 5.03
395 404 1.208293 TGGACACAAAAACCAAAGCCC 59.792 47.619 0.00 0.00 0.00 5.19
396 405 1.208293 GGACACAAAAACCAAAGCCCA 59.792 47.619 0.00 0.00 0.00 5.36
404 413 0.823460 AACCAAAGCCCACACACAAG 59.177 50.000 0.00 0.00 0.00 3.16
420 429 1.273324 ACAAGGATCCCGGAGTTCTCT 60.273 52.381 8.55 0.00 0.00 3.10
431 440 0.868406 GAGTTCTCTTGGCCACAACG 59.132 55.000 3.88 0.00 32.14 4.10
435 444 2.124529 TCTTGGCCACAACGTGCA 60.125 55.556 3.88 0.00 32.14 4.57
460 470 2.833957 AAAAACCCCGGAGCTCGT 59.166 55.556 0.73 0.00 37.11 4.18
462 472 3.584868 AAAACCCCGGAGCTCGTCG 62.585 63.158 0.73 6.52 37.11 5.12
516 536 1.694150 CGTGGGATGGGTACAGATCAT 59.306 52.381 0.00 0.00 0.00 2.45
517 537 2.897326 CGTGGGATGGGTACAGATCATA 59.103 50.000 0.00 0.00 0.00 2.15
519 539 3.261897 GTGGGATGGGTACAGATCATAGG 59.738 52.174 0.00 0.00 0.00 2.57
523 543 4.597507 GGATGGGTACAGATCATAGGGAAA 59.402 45.833 0.00 0.00 0.00 3.13
538 558 6.881065 TCATAGGGAAAAAGTCTCACAATCAG 59.119 38.462 0.00 0.00 0.00 2.90
562 582 7.064371 CAGTAGGAACAAATCTCTCAATCACAG 59.936 40.741 0.00 0.00 0.00 3.66
579 599 3.390967 TCACAGGGAACAACTCTCAATCA 59.609 43.478 0.00 0.00 0.00 2.57
580 600 3.499918 CACAGGGAACAACTCTCAATCAC 59.500 47.826 0.00 0.00 0.00 3.06
593 613 5.822519 ACTCTCAATCACAAGTTGTTGCTTA 59.177 36.000 5.57 0.00 37.14 3.09
621 641 1.214589 GACCGTAGATGGCGTGTGT 59.785 57.895 0.00 0.00 0.00 3.72
629 657 4.961511 TGGCGTGTGTCCGTGCTC 62.962 66.667 0.00 0.00 0.00 4.26
634 662 1.663739 GTGTGTCCGTGCTCCAGTA 59.336 57.895 0.00 0.00 0.00 2.74
660 688 6.019961 CACACAAAGTGTTTGATAAAATGCGT 60.020 34.615 6.40 0.00 45.08 5.24
661 689 7.166638 CACACAAAGTGTTTGATAAAATGCGTA 59.833 33.333 6.40 0.00 45.08 4.42
662 690 7.166804 ACACAAAGTGTTTGATAAAATGCGTAC 59.833 33.333 6.40 0.00 45.08 3.67
663 691 7.166638 CACAAAGTGTTTGATAAAATGCGTACA 59.833 33.333 6.40 0.00 43.26 2.90
664 692 7.865385 ACAAAGTGTTTGATAAAATGCGTACAT 59.135 29.630 6.40 0.00 43.26 2.29
665 693 7.795431 AAGTGTTTGATAAAATGCGTACATG 57.205 32.000 0.00 0.00 36.36 3.21
667 695 7.589395 AGTGTTTGATAAAATGCGTACATGAA 58.411 30.769 0.00 0.00 36.36 2.57
668 696 7.537306 AGTGTTTGATAAAATGCGTACATGAAC 59.463 33.333 0.00 0.00 36.36 3.18
670 698 7.862873 TGTTTGATAAAATGCGTACATGAACAA 59.137 29.630 0.00 0.00 36.36 2.83
671 699 8.365210 GTTTGATAAAATGCGTACATGAACAAG 58.635 33.333 0.00 0.00 36.36 3.16
672 700 7.371126 TGATAAAATGCGTACATGAACAAGA 57.629 32.000 0.00 0.00 36.36 3.02
673 701 7.984391 TGATAAAATGCGTACATGAACAAGAT 58.016 30.769 0.00 0.00 36.36 2.40
674 702 8.122330 TGATAAAATGCGTACATGAACAAGATC 58.878 33.333 0.00 0.00 36.36 2.75
675 703 4.882671 AATGCGTACATGAACAAGATCC 57.117 40.909 0.00 0.00 36.36 3.36
692 720 7.762382 ACAAGATCCGACAAATAGGAAAAATC 58.238 34.615 0.00 0.00 40.32 2.17
698 726 8.662781 TCCGACAAATAGGAAAAATCTGATAG 57.337 34.615 0.00 0.00 32.86 2.08
719 747 2.233271 CTATGATTGAATGGCCGGCTT 58.767 47.619 28.56 14.46 0.00 4.35
726 754 4.820744 ATGGCCGGCTTCCGCAAT 62.821 61.111 28.56 6.05 46.86 3.56
735 774 0.388520 GCTTCCGCAATGGTGTTTCC 60.389 55.000 0.00 0.00 39.52 3.13
736 775 3.024050 GCTTCCGCAATGGTGTTTCCA 62.024 52.381 0.00 0.00 42.75 3.53
746 785 2.567862 TGGTGTTTCCATATCAGGGGA 58.432 47.619 0.00 0.00 41.93 4.81
753 800 0.393077 CCATATCAGGGGACACCGTC 59.607 60.000 0.00 0.00 46.96 4.79
755 802 1.113517 ATATCAGGGGACACCGTCGG 61.114 60.000 10.48 10.48 46.96 4.79
767 814 4.873129 CGTCGGGCAGCGCATAGT 62.873 66.667 11.47 0.00 0.00 2.12
768 815 3.264897 GTCGGGCAGCGCATAGTG 61.265 66.667 11.47 0.00 0.00 2.74
771 818 1.300931 CGGGCAGCGCATAGTGTAT 60.301 57.895 11.47 0.00 0.00 2.29
780 827 5.392057 GCAGCGCATAGTGTATGAGATACTA 60.392 44.000 11.47 0.00 38.08 1.82
783 830 6.092944 AGCGCATAGTGTATGAGATACTACTC 59.907 42.308 11.47 0.00 38.08 2.59
784 831 6.470999 CGCATAGTGTATGAGATACTACTCG 58.529 44.000 0.00 0.00 38.08 4.18
786 833 7.463515 CGCATAGTGTATGAGATACTACTCGAG 60.464 44.444 11.84 11.84 38.08 4.04
787 834 7.201574 GCATAGTGTATGAGATACTACTCGAGG 60.202 44.444 18.41 1.82 34.88 4.63
788 835 5.553123 AGTGTATGAGATACTACTCGAGGG 58.447 45.833 18.41 11.54 39.49 4.30
790 837 2.273538 TGAGATACTACTCGAGGGCC 57.726 55.000 18.41 0.00 39.49 5.80
809 867 0.471617 CCCAGGCACTAGGGAATGAG 59.528 60.000 0.00 0.00 45.50 2.90
824 882 2.285827 ATGAGAGCGCTACAGTGTTC 57.714 50.000 11.50 0.00 36.26 3.18
833 891 3.366070 GCGCTACAGTGTTCTACAGAGAA 60.366 47.826 0.00 0.00 39.47 2.87
836 894 5.529791 GCTACAGTGTTCTACAGAGAAACA 58.470 41.667 0.00 0.00 43.38 2.83
876 934 2.353610 GGAAAGCGACGGGGGAGTA 61.354 63.158 0.00 0.00 0.00 2.59
904 962 2.159324 GGCTAAAAAGCAGATCCACAGC 60.159 50.000 0.00 0.00 36.33 4.40
916 974 4.988598 CACAGCCGGTTGACGCCT 62.989 66.667 26.33 0.00 42.52 5.52
919 977 4.452733 AGCCGGTTGACGCCTAGC 62.453 66.667 1.90 0.00 42.52 3.42
955 1013 8.265055 TCCATGTTCTAGTAATCTGGGTAAAAG 58.735 37.037 0.00 0.00 0.00 2.27
956 1014 7.499232 CCATGTTCTAGTAATCTGGGTAAAAGG 59.501 40.741 0.00 0.00 0.00 3.11
957 1015 7.563724 TGTTCTAGTAATCTGGGTAAAAGGT 57.436 36.000 0.00 0.00 0.00 3.50
1022 1089 2.230266 GCCTATAAGAGCTCTCCTTCGG 59.770 54.545 18.55 14.57 0.00 4.30
1056 1123 4.438744 GCGTGAACTCAATTCCCCAATTAG 60.439 45.833 0.00 0.00 36.36 1.73
1085 1152 5.044772 CCTAGACCCCATATACTCTCTGCTA 60.045 48.000 0.00 0.00 0.00 3.49
1142 1225 0.443869 CGGGTTGCTCTTGTTGATCG 59.556 55.000 0.00 0.00 0.00 3.69
1153 1236 3.154473 TTGATCGGGAGGCGGAGG 61.154 66.667 0.00 0.00 0.00 4.30
1240 1336 3.303189 GCAGCAGCCTGAGGTAGA 58.697 61.111 0.00 0.00 41.77 2.59
1241 1337 1.143620 GCAGCAGCCTGAGGTAGAG 59.856 63.158 0.00 0.00 41.77 2.43
1242 1338 1.143620 CAGCAGCCTGAGGTAGAGC 59.856 63.158 0.00 0.00 41.77 4.09
1243 1339 2.105930 GCAGCCTGAGGTAGAGCG 59.894 66.667 0.00 0.00 0.00 5.03
1244 1340 2.716017 GCAGCCTGAGGTAGAGCGT 61.716 63.158 0.00 0.00 0.00 5.07
1245 1341 1.140589 CAGCCTGAGGTAGAGCGTG 59.859 63.158 0.00 0.00 0.00 5.34
1246 1342 1.304547 AGCCTGAGGTAGAGCGTGT 60.305 57.895 0.00 0.00 0.00 4.49
1247 1343 1.153745 GCCTGAGGTAGAGCGTGTG 60.154 63.158 0.00 0.00 0.00 3.82
1248 1344 1.513158 CCTGAGGTAGAGCGTGTGG 59.487 63.158 0.00 0.00 0.00 4.17
1249 1345 1.513158 CTGAGGTAGAGCGTGTGGG 59.487 63.158 0.00 0.00 0.00 4.61
1250 1346 2.184579 GAGGTAGAGCGTGTGGGC 59.815 66.667 0.00 0.00 0.00 5.36
1251 1347 3.701604 GAGGTAGAGCGTGTGGGCG 62.702 68.421 0.00 0.00 38.18 6.13
1252 1348 4.814294 GGTAGAGCGTGTGGGCGG 62.814 72.222 0.00 0.00 38.18 6.13
1266 1362 3.436055 GCGGCGGCCATGTGTTTA 61.436 61.111 20.71 0.00 0.00 2.01
1267 1363 2.791256 CGGCGGCCATGTGTTTAG 59.209 61.111 20.71 0.00 0.00 1.85
1268 1364 1.743623 CGGCGGCCATGTGTTTAGA 60.744 57.895 20.71 0.00 0.00 2.10
1269 1365 1.095228 CGGCGGCCATGTGTTTAGAT 61.095 55.000 20.71 0.00 0.00 1.98
1270 1366 0.381801 GGCGGCCATGTGTTTAGATG 59.618 55.000 15.62 0.00 0.00 2.90
1271 1367 0.248621 GCGGCCATGTGTTTAGATGC 60.249 55.000 2.24 0.00 0.00 3.91
1272 1368 1.382522 CGGCCATGTGTTTAGATGCT 58.617 50.000 2.24 0.00 0.00 3.79
1273 1369 1.331756 CGGCCATGTGTTTAGATGCTC 59.668 52.381 2.24 0.00 0.00 4.26
1274 1370 2.368439 GGCCATGTGTTTAGATGCTCA 58.632 47.619 0.00 0.00 0.00 4.26
1275 1371 2.954318 GGCCATGTGTTTAGATGCTCAT 59.046 45.455 0.00 0.00 0.00 2.90
1276 1372 3.243301 GGCCATGTGTTTAGATGCTCATG 60.243 47.826 0.00 0.00 36.76 3.07
1277 1373 3.794475 GCCATGTGTTTAGATGCTCATGC 60.794 47.826 0.00 0.00 36.11 4.06
1287 1383 3.846754 GCTCATGCAAAACCACGC 58.153 55.556 0.00 0.00 39.41 5.34
1288 1384 2.082366 GCTCATGCAAAACCACGCG 61.082 57.895 3.53 3.53 39.41 6.01
1289 1385 1.573932 CTCATGCAAAACCACGCGA 59.426 52.632 15.93 0.00 0.00 5.87
1290 1386 0.725784 CTCATGCAAAACCACGCGAC 60.726 55.000 15.93 0.00 0.00 5.19
1291 1387 1.009108 CATGCAAAACCACGCGACA 60.009 52.632 15.93 0.00 0.00 4.35
1292 1388 0.387112 CATGCAAAACCACGCGACAT 60.387 50.000 15.93 0.00 0.00 3.06
1293 1389 0.313672 ATGCAAAACCACGCGACATT 59.686 45.000 15.93 0.00 0.00 2.71
1294 1390 0.593518 TGCAAAACCACGCGACATTG 60.594 50.000 15.93 11.48 0.00 2.82
1295 1391 0.593773 GCAAAACCACGCGACATTGT 60.594 50.000 15.93 0.00 0.00 2.71
1296 1392 1.833860 CAAAACCACGCGACATTGTT 58.166 45.000 15.93 5.36 0.00 2.83
1297 1393 1.516453 CAAAACCACGCGACATTGTTG 59.484 47.619 15.93 5.95 0.00 3.33
1298 1394 0.736053 AAACCACGCGACATTGTTGT 59.264 45.000 15.93 0.00 39.32 3.32
1299 1395 0.028770 AACCACGCGACATTGTTGTG 59.971 50.000 15.93 14.68 35.79 3.33
1300 1396 1.092921 ACCACGCGACATTGTTGTGT 61.093 50.000 15.93 15.92 40.77 3.72
1301 1397 2.769564 CACGCGACATTGTTGTGTG 58.230 52.632 27.58 27.58 47.00 3.82
1302 1398 2.684128 ACGCGACATTGTTGTGTGA 58.316 47.368 19.90 0.00 38.95 3.58
1303 1399 0.303493 ACGCGACATTGTTGTGTGAC 59.697 50.000 19.90 0.00 38.95 3.67
1304 1400 0.384230 CGCGACATTGTTGTGTGACC 60.384 55.000 0.00 0.00 35.79 4.02
1305 1401 0.660488 GCGACATTGTTGTGTGACCA 59.340 50.000 5.93 0.00 35.79 4.02
1306 1402 1.064803 GCGACATTGTTGTGTGACCAA 59.935 47.619 5.93 0.00 35.79 3.67
1307 1403 2.478709 GCGACATTGTTGTGTGACCAAA 60.479 45.455 5.93 0.00 35.79 3.28
1308 1404 3.362295 CGACATTGTTGTGTGACCAAAG 58.638 45.455 0.00 0.00 35.79 2.77
1309 1405 3.064682 CGACATTGTTGTGTGACCAAAGA 59.935 43.478 0.00 0.00 35.79 2.52
1310 1406 4.261155 CGACATTGTTGTGTGACCAAAGAT 60.261 41.667 0.00 0.00 35.79 2.40
1311 1407 5.049749 CGACATTGTTGTGTGACCAAAGATA 60.050 40.000 0.00 0.00 35.79 1.98
1312 1408 6.317789 ACATTGTTGTGTGACCAAAGATAG 57.682 37.500 0.00 0.00 33.85 2.08
1313 1409 6.061441 ACATTGTTGTGTGACCAAAGATAGA 58.939 36.000 0.00 0.00 33.85 1.98
1314 1410 6.716628 ACATTGTTGTGTGACCAAAGATAGAT 59.283 34.615 0.00 0.00 33.85 1.98
1315 1411 7.231317 ACATTGTTGTGTGACCAAAGATAGATT 59.769 33.333 0.00 0.00 33.85 2.40
1316 1412 7.581213 TTGTTGTGTGACCAAAGATAGATTT 57.419 32.000 0.00 0.00 0.00 2.17
1317 1413 7.581213 TGTTGTGTGACCAAAGATAGATTTT 57.419 32.000 0.00 0.00 0.00 1.82
1318 1414 7.424803 TGTTGTGTGACCAAAGATAGATTTTG 58.575 34.615 0.00 0.00 35.75 2.44
1319 1415 7.068103 TGTTGTGTGACCAAAGATAGATTTTGT 59.932 33.333 0.00 0.00 34.51 2.83
1320 1416 7.581213 TGTGTGACCAAAGATAGATTTTGTT 57.419 32.000 0.00 0.00 34.51 2.83
1321 1417 8.006298 TGTGTGACCAAAGATAGATTTTGTTT 57.994 30.769 0.00 0.00 34.51 2.83
1322 1418 9.126151 TGTGTGACCAAAGATAGATTTTGTTTA 57.874 29.630 0.00 0.00 34.51 2.01
1323 1419 9.612620 GTGTGACCAAAGATAGATTTTGTTTAG 57.387 33.333 0.00 0.00 34.51 1.85
1324 1420 9.349713 TGTGACCAAAGATAGATTTTGTTTAGT 57.650 29.630 0.00 0.00 34.51 2.24
1340 1436 9.533253 TTTTGTTTAGTAAGTACTTTAGACGCT 57.467 29.630 14.49 5.75 37.73 5.07
1341 1437 8.733857 TTGTTTAGTAAGTACTTTAGACGCTC 57.266 34.615 14.49 1.62 37.73 5.03
1342 1438 7.874940 TGTTTAGTAAGTACTTTAGACGCTCA 58.125 34.615 14.49 3.91 37.73 4.26
1343 1439 8.352201 TGTTTAGTAAGTACTTTAGACGCTCAA 58.648 33.333 14.49 0.00 37.73 3.02
1344 1440 9.185192 GTTTAGTAAGTACTTTAGACGCTCAAA 57.815 33.333 14.49 4.73 37.73 2.69
1345 1441 9.918630 TTTAGTAAGTACTTTAGACGCTCAAAT 57.081 29.630 14.49 0.00 37.73 2.32
1348 1444 9.918630 AGTAAGTACTTTAGACGCTCAAATAAA 57.081 29.630 14.49 0.00 31.13 1.40
1353 1449 9.821662 GTACTTTAGACGCTCAAATAAAAATGT 57.178 29.630 0.00 0.00 0.00 2.71
1355 1451 9.744468 ACTTTAGACGCTCAAATAAAAATGTTT 57.256 25.926 0.00 0.00 0.00 2.83
1357 1453 6.911484 AGACGCTCAAATAAAAATGTTTCG 57.089 33.333 0.00 0.00 0.00 3.46
1358 1454 6.435428 AGACGCTCAAATAAAAATGTTTCGT 58.565 32.000 0.00 0.00 0.00 3.85
1359 1455 6.915843 AGACGCTCAAATAAAAATGTTTCGTT 59.084 30.769 0.00 0.00 0.00 3.85
1360 1456 8.071368 AGACGCTCAAATAAAAATGTTTCGTTA 58.929 29.630 0.00 0.00 0.00 3.18
1361 1457 8.736751 ACGCTCAAATAAAAATGTTTCGTTAT 57.263 26.923 0.00 0.00 0.00 1.89
1362 1458 9.187455 ACGCTCAAATAAAAATGTTTCGTTATT 57.813 25.926 0.00 0.00 0.00 1.40
1363 1459 9.656834 CGCTCAAATAAAAATGTTTCGTTATTC 57.343 29.630 0.00 0.00 0.00 1.75
1381 1477 8.227791 TCGTTATTCAACTCTTCTATTTTGTGC 58.772 33.333 0.00 0.00 32.09 4.57
1382 1478 8.015087 CGTTATTCAACTCTTCTATTTTGTGCA 58.985 33.333 0.00 0.00 32.09 4.57
1383 1479 9.677567 GTTATTCAACTCTTCTATTTTGTGCAA 57.322 29.630 0.00 0.00 0.00 4.08
1386 1482 8.578308 TTCAACTCTTCTATTTTGTGCAATTG 57.422 30.769 0.00 0.00 0.00 2.32
1387 1483 7.715657 TCAACTCTTCTATTTTGTGCAATTGT 58.284 30.769 7.40 0.00 0.00 2.71
1388 1484 8.196771 TCAACTCTTCTATTTTGTGCAATTGTT 58.803 29.630 7.40 0.00 0.00 2.83
1389 1485 8.819974 CAACTCTTCTATTTTGTGCAATTGTTT 58.180 29.630 7.40 0.00 0.00 2.83
1390 1486 8.356533 ACTCTTCTATTTTGTGCAATTGTTTG 57.643 30.769 7.40 0.00 35.85 2.93
1391 1487 7.981225 ACTCTTCTATTTTGTGCAATTGTTTGT 59.019 29.630 7.40 0.00 35.17 2.83
1392 1488 9.462174 CTCTTCTATTTTGTGCAATTGTTTGTA 57.538 29.630 7.40 0.00 35.17 2.41
1393 1489 9.462174 TCTTCTATTTTGTGCAATTGTTTGTAG 57.538 29.630 7.40 2.04 35.17 2.74
1394 1490 9.248291 CTTCTATTTTGTGCAATTGTTTGTAGT 57.752 29.630 7.40 0.00 35.17 2.73
1395 1491 9.593134 TTCTATTTTGTGCAATTGTTTGTAGTT 57.407 25.926 7.40 0.00 35.17 2.24
1396 1492 9.029243 TCTATTTTGTGCAATTGTTTGTAGTTG 57.971 29.630 7.40 0.00 35.17 3.16
1397 1493 5.462034 TTTGTGCAATTGTTTGTAGTTGC 57.538 34.783 7.40 2.25 45.27 4.17
1401 1497 3.976169 GCAATTGTTTGTAGTTGCAGGA 58.024 40.909 7.40 0.00 44.63 3.86
1402 1498 3.983344 GCAATTGTTTGTAGTTGCAGGAG 59.017 43.478 7.40 0.00 44.63 3.69
1403 1499 4.261572 GCAATTGTTTGTAGTTGCAGGAGA 60.262 41.667 7.40 0.00 44.63 3.71
1404 1500 5.215160 CAATTGTTTGTAGTTGCAGGAGAC 58.785 41.667 0.00 0.00 0.00 3.36
1405 1501 2.846193 TGTTTGTAGTTGCAGGAGACC 58.154 47.619 0.00 0.00 0.00 3.85
1406 1502 2.171659 TGTTTGTAGTTGCAGGAGACCA 59.828 45.455 0.00 0.00 0.00 4.02
1407 1503 3.181445 TGTTTGTAGTTGCAGGAGACCAT 60.181 43.478 0.00 0.00 0.00 3.55
1408 1504 3.334583 TTGTAGTTGCAGGAGACCATC 57.665 47.619 0.00 0.00 0.00 3.51
1409 1505 2.540383 TGTAGTTGCAGGAGACCATCT 58.460 47.619 0.00 0.00 0.00 2.90
1410 1506 3.708451 TGTAGTTGCAGGAGACCATCTA 58.292 45.455 0.00 0.00 0.00 1.98
1411 1507 3.701542 TGTAGTTGCAGGAGACCATCTAG 59.298 47.826 0.00 0.00 0.00 2.43
1412 1508 2.826488 AGTTGCAGGAGACCATCTAGT 58.174 47.619 0.00 0.00 0.00 2.57
1413 1509 2.763448 AGTTGCAGGAGACCATCTAGTC 59.237 50.000 0.00 0.00 37.01 2.59
1414 1510 2.497675 GTTGCAGGAGACCATCTAGTCA 59.502 50.000 0.00 0.00 39.34 3.41
1415 1511 3.037851 TGCAGGAGACCATCTAGTCAT 57.962 47.619 0.00 0.00 39.34 3.06
1416 1512 2.961741 TGCAGGAGACCATCTAGTCATC 59.038 50.000 0.00 0.00 39.34 2.92
1417 1513 3.230134 GCAGGAGACCATCTAGTCATCT 58.770 50.000 0.00 0.00 39.34 2.90
1418 1514 4.141158 TGCAGGAGACCATCTAGTCATCTA 60.141 45.833 0.00 0.00 39.34 1.98
1419 1515 4.217550 GCAGGAGACCATCTAGTCATCTAC 59.782 50.000 0.00 0.00 39.34 2.59
1420 1516 4.454161 CAGGAGACCATCTAGTCATCTACG 59.546 50.000 0.00 0.00 39.34 3.51
1421 1517 4.103469 AGGAGACCATCTAGTCATCTACGT 59.897 45.833 0.00 0.00 39.34 3.57
1422 1518 5.307456 AGGAGACCATCTAGTCATCTACGTA 59.693 44.000 0.00 0.00 39.34 3.57
1423 1519 5.640357 GGAGACCATCTAGTCATCTACGTAG 59.360 48.000 16.73 16.73 39.34 3.51
1424 1520 6.422344 AGACCATCTAGTCATCTACGTAGA 57.578 41.667 26.55 26.55 39.34 2.59
1425 1521 7.011499 AGACCATCTAGTCATCTACGTAGAT 57.989 40.000 28.45 28.45 43.51 1.98
1426 1522 7.455058 AGACCATCTAGTCATCTACGTAGATT 58.545 38.462 30.87 20.85 40.91 2.40
1427 1523 7.604927 AGACCATCTAGTCATCTACGTAGATTC 59.395 40.741 30.87 25.07 40.91 2.52
1428 1524 7.455058 ACCATCTAGTCATCTACGTAGATTCT 58.545 38.462 30.87 29.06 40.91 2.40
1429 1525 8.595421 ACCATCTAGTCATCTACGTAGATTCTA 58.405 37.037 30.87 28.72 40.91 2.10
1430 1526 9.093970 CCATCTAGTCATCTACGTAGATTCTAG 57.906 40.741 35.01 35.01 40.91 2.43
1431 1527 9.093970 CATCTAGTCATCTACGTAGATTCTAGG 57.906 40.741 36.69 28.74 40.91 3.02
1432 1528 8.419922 TCTAGTCATCTACGTAGATTCTAGGA 57.580 38.462 36.69 29.31 40.91 2.94
1433 1529 8.525316 TCTAGTCATCTACGTAGATTCTAGGAG 58.475 40.741 36.69 28.16 40.91 3.69
1434 1530 5.935789 AGTCATCTACGTAGATTCTAGGAGC 59.064 44.000 30.87 18.61 40.91 4.70
1435 1531 5.122711 GTCATCTACGTAGATTCTAGGAGCC 59.877 48.000 30.87 12.91 40.91 4.70
1436 1532 4.701651 TCTACGTAGATTCTAGGAGCCA 57.298 45.455 21.25 0.00 0.00 4.75
1437 1533 4.643463 TCTACGTAGATTCTAGGAGCCAG 58.357 47.826 21.25 9.99 0.00 4.85
1438 1534 1.957877 ACGTAGATTCTAGGAGCCAGC 59.042 52.381 17.83 0.00 0.00 4.85
1439 1535 2.235016 CGTAGATTCTAGGAGCCAGCT 58.765 52.381 7.48 0.00 0.00 4.24
1440 1536 2.030363 CGTAGATTCTAGGAGCCAGCTG 60.030 54.545 6.78 6.78 0.00 4.24
1441 1537 0.758123 AGATTCTAGGAGCCAGCTGC 59.242 55.000 8.66 2.51 41.71 5.25
1498 1594 6.441088 AGTCCCTATAATGGATCCTTCAAC 57.559 41.667 14.23 0.00 33.65 3.18
1581 1679 1.661341 GGCTTCTGCATACTGACAGG 58.339 55.000 7.51 0.00 41.91 4.00
1590 1688 2.905075 CATACTGACAGGGCATCGAAA 58.095 47.619 7.51 0.00 0.00 3.46
1655 1753 1.499007 TCTGGAAAAGAAGGGCCTGTT 59.501 47.619 6.92 0.00 29.54 3.16
1656 1754 1.889170 CTGGAAAAGAAGGGCCTGTTC 59.111 52.381 6.92 8.85 31.19 3.18
1657 1755 1.257743 GGAAAAGAAGGGCCTGTTCC 58.742 55.000 6.92 14.34 41.77 3.62
1658 1756 1.203063 GGAAAAGAAGGGCCTGTTCCT 60.203 52.381 22.18 10.43 43.90 3.36
1659 1757 1.889170 GAAAAGAAGGGCCTGTTCCTG 59.111 52.381 6.92 0.00 34.34 3.86
1660 1758 0.853530 AAAGAAGGGCCTGTTCCTGT 59.146 50.000 6.92 0.00 34.34 4.00
1668 1772 0.960861 GCCTGTTCCTGTTGGGTAGC 60.961 60.000 0.00 0.00 36.25 3.58
1708 1812 5.869888 GTGAAACTTAAGATGTCGGATGACT 59.130 40.000 10.09 0.00 45.70 3.41
1724 1828 1.280133 TGACTGGCTTCCATCCAAGAG 59.720 52.381 0.00 0.00 32.41 2.85
1728 1832 1.339055 TGGCTTCCATCCAAGAGAACG 60.339 52.381 0.00 0.00 0.00 3.95
1762 1866 1.303309 CAATCTCAATCCGGAGTGGC 58.697 55.000 29.89 0.00 37.80 5.01
1787 1891 8.336806 GCATGAAGATTTCAAATTTGTTGTGAA 58.663 29.630 17.47 1.80 43.95 3.18
1788 1892 9.858247 CATGAAGATTTCAAATTTGTTGTGAAG 57.142 29.630 17.47 0.00 43.95 3.02
1871 1975 4.651778 TCCTTTGTTCATCAAGTCCGAAT 58.348 39.130 0.00 0.00 37.35 3.34
1884 1990 7.795482 TCAAGTCCGAATTAGTTTCTTTTCA 57.205 32.000 0.00 0.00 31.73 2.69
1909 2015 9.719355 CATATACACTACCATATTAAACTGCCA 57.281 33.333 0.00 0.00 0.00 4.92
1917 2023 5.475564 ACCATATTAAACTGCCAAAACGTCT 59.524 36.000 0.00 0.00 0.00 4.18
1918 2024 6.027749 CCATATTAAACTGCCAAAACGTCTC 58.972 40.000 0.00 0.00 0.00 3.36
1919 2025 6.128007 CCATATTAAACTGCCAAAACGTCTCT 60.128 38.462 0.00 0.00 0.00 3.10
1920 2026 7.065324 CCATATTAAACTGCCAAAACGTCTCTA 59.935 37.037 0.00 0.00 0.00 2.43
1932 2038 4.992381 AACGTCTCTAACATTTGTGAGC 57.008 40.909 0.00 0.00 0.00 4.26
1945 2051 3.334583 TTGTGAGCAGAGGGTGTAATC 57.665 47.619 0.00 0.00 0.00 1.75
1993 2099 6.128282 CGATATATCCAGGTTGGTAAACATGC 60.128 42.308 7.15 0.00 44.72 4.06
2069 2175 9.315525 ACTCAAGTTTCAACTCTTAACTTACTC 57.684 33.333 0.00 0.00 39.40 2.59
2084 2190 3.133003 ACTTACTCAAGACCATGGATCCG 59.867 47.826 21.47 4.11 35.60 4.18
2308 2414 5.092781 CACAAACCCATACGCAAAGATAAC 58.907 41.667 0.00 0.00 0.00 1.89
2389 2591 0.984230 AGGCACTTGCACCTAGCTAA 59.016 50.000 3.15 0.00 45.94 3.09
2395 2597 4.726416 CACTTGCACCTAGCTAATTTGTG 58.274 43.478 0.00 1.74 45.94 3.33
2417 2621 7.950512 TGTGACAATGGTTATGATGTTTTTCT 58.049 30.769 0.00 0.00 0.00 2.52
2418 2622 7.866898 TGTGACAATGGTTATGATGTTTTTCTG 59.133 33.333 0.00 0.00 0.00 3.02
2489 2695 2.124695 GGGATCCACGTTGGGAGC 60.125 66.667 15.23 1.69 42.62 4.70
2491 2697 1.745489 GGATCCACGTTGGGAGCAC 60.745 63.158 6.95 0.00 45.14 4.40
2545 2751 7.699391 CCTACAAATGATAAGTTGCATGTTCAG 59.301 37.037 0.00 0.00 0.00 3.02
2586 2792 9.392506 TGGAAAGATAGGAGGAATATTACATGA 57.607 33.333 0.00 0.00 0.00 3.07
2642 2853 5.465724 CCCTTAACTGATGTAGTAATTCGCC 59.534 44.000 0.00 0.00 39.18 5.54
2845 3067 5.163804 TGGATTGTACGAAATTGTCCAATCG 60.164 40.000 10.96 2.44 39.19 3.34
2954 3181 5.123344 TGAAAAGTATCGTCTCATCGACTCA 59.877 40.000 0.00 0.00 42.56 3.41
3025 3252 0.597568 CGAGCAAGGTGCCAAAATGA 59.402 50.000 0.00 0.00 46.52 2.57
3029 3256 3.696051 GAGCAAGGTGCCAAAATGATCTA 59.304 43.478 0.00 0.00 46.52 1.98
3035 3272 2.033801 GTGCCAAAATGATCTAGCGCAT 59.966 45.455 11.47 0.00 0.00 4.73
3077 3314 4.448395 GCAGCTTGCAAAAACATGTAATGA 59.552 37.500 0.00 0.00 45.54 2.57
3079 3316 7.048178 GCAGCTTGCAAAAACATGTAATGAAC 61.048 38.462 0.00 0.00 45.54 3.18
3096 3388 9.283768 TGTAATGAACTCTGCTTTGAGATTTTA 57.716 29.630 8.49 0.00 37.50 1.52
3137 3429 2.132762 CGTGAGAACAAACGTAGGCTT 58.867 47.619 0.00 0.00 35.13 4.35
3142 3434 3.275999 AGAACAAACGTAGGCTTGTTGT 58.724 40.909 18.64 13.26 44.02 3.32
3144 3436 2.634600 ACAAACGTAGGCTTGTTGTCA 58.365 42.857 0.00 0.00 34.73 3.58
3145 3437 3.011119 ACAAACGTAGGCTTGTTGTCAA 58.989 40.909 0.00 0.00 34.73 3.18
3146 3438 3.181504 ACAAACGTAGGCTTGTTGTCAAC 60.182 43.478 8.86 8.86 34.73 3.18
3147 3439 2.319136 ACGTAGGCTTGTTGTCAACA 57.681 45.000 14.48 14.48 40.21 3.33
3199 3491 2.543777 TAGGGTGCTCACTGTTGAAC 57.456 50.000 0.00 0.00 0.00 3.18
3203 3495 3.009473 AGGGTGCTCACTGTTGAACATAT 59.991 43.478 0.00 0.00 30.58 1.78
3213 3505 6.255670 TCACTGTTGAACATATGCTTATCGTC 59.744 38.462 1.58 0.00 0.00 4.20
3299 3592 1.519719 TGGCACAAAACAACCCTGC 59.480 52.632 0.00 0.00 31.92 4.85
3300 3593 0.975040 TGGCACAAAACAACCCTGCT 60.975 50.000 0.00 0.00 31.92 4.24
3301 3594 1.036707 GGCACAAAACAACCCTGCTA 58.963 50.000 0.00 0.00 0.00 3.49
3302 3595 1.618343 GGCACAAAACAACCCTGCTAT 59.382 47.619 0.00 0.00 0.00 2.97
3303 3596 2.037121 GGCACAAAACAACCCTGCTATT 59.963 45.455 0.00 0.00 0.00 1.73
3304 3597 3.257127 GGCACAAAACAACCCTGCTATTA 59.743 43.478 0.00 0.00 0.00 0.98
3305 3598 4.081697 GGCACAAAACAACCCTGCTATTAT 60.082 41.667 0.00 0.00 0.00 1.28
3314 3607 3.968265 ACCCTGCTATTATGTGCAACTT 58.032 40.909 0.00 0.00 38.81 2.66
3317 3610 4.439153 CCCTGCTATTATGTGCAACTTGTG 60.439 45.833 0.00 0.00 38.81 3.33
3362 3655 4.582869 CACATCTGTCCAAATTCTCCAGA 58.417 43.478 0.00 0.00 36.67 3.86
3370 3667 5.591472 TGTCCAAATTCTCCAGAATGCATAG 59.409 40.000 0.00 0.00 43.41 2.23
3419 3717 3.658636 TATAGAAGCCGGTGCGATCGC 62.659 57.143 32.48 32.48 44.33 4.58
3460 3758 0.465097 CCCAGATCACACCATCTGCC 60.465 60.000 5.12 0.00 45.96 4.85
3461 3759 0.465097 CCAGATCACACCATCTGCCC 60.465 60.000 5.12 0.00 45.96 5.36
3463 3761 1.524621 GATCACACCATCTGCCCGG 60.525 63.158 0.00 0.00 0.00 5.73
3464 3762 1.971505 GATCACACCATCTGCCCGGA 61.972 60.000 0.73 0.00 0.00 5.14
3465 3763 1.348008 ATCACACCATCTGCCCGGAT 61.348 55.000 0.73 0.00 0.00 4.18
3466 3764 1.820906 CACACCATCTGCCCGGATG 60.821 63.158 0.73 9.61 41.77 3.51
3467 3765 1.995066 ACACCATCTGCCCGGATGA 60.995 57.895 16.64 0.00 44.01 2.92
3519 3817 7.433425 GCCAGATTTTGAATGATTAACAGCTAC 59.567 37.037 0.00 0.00 0.00 3.58
3542 3840 3.299503 AGAAGCCAGGCAAAAAGAAAGA 58.700 40.909 15.80 0.00 0.00 2.52
3596 3894 0.392193 ACGAGCTCCAGGCATTTCTG 60.392 55.000 8.47 0.00 44.79 3.02
3857 4158 0.605589 CCTGGAAGACGTTGGGGAAC 60.606 60.000 0.00 0.00 34.07 3.62
3918 4219 1.347817 GACGCTCTTCTCGTGCTTGG 61.348 60.000 0.00 0.00 40.59 3.61
3933 4234 0.596577 CTTGGTCTTCTCGTCGTCCA 59.403 55.000 0.00 0.00 0.00 4.02
4040 4341 0.463833 GCCCGTATTTGGACTCCAGG 60.464 60.000 0.00 0.00 33.81 4.45
4148 4449 1.374125 CACGGCGTGGATCACTGAA 60.374 57.895 31.19 0.00 31.34 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.987890 GCATACATTTAAACAACAATTGGAACT 58.012 29.630 10.83 0.00 34.12 3.01
3 4 7.949428 CGCATACATTTAAACAACAATTGGAAC 59.051 33.333 10.83 0.00 34.12 3.62
4 5 7.653713 ACGCATACATTTAAACAACAATTGGAA 59.346 29.630 10.83 0.00 34.12 3.53
5 6 7.115520 CACGCATACATTTAAACAACAATTGGA 59.884 33.333 10.83 0.00 34.12 3.53
6 7 7.095857 ACACGCATACATTTAAACAACAATTGG 60.096 33.333 10.83 0.00 34.12 3.16
7 8 7.782242 ACACGCATACATTTAAACAACAATTG 58.218 30.769 3.24 3.24 0.00 2.32
8 9 7.938563 ACACGCATACATTTAAACAACAATT 57.061 28.000 0.00 0.00 0.00 2.32
9 10 7.272515 GCTACACGCATACATTTAAACAACAAT 59.727 33.333 0.00 0.00 38.92 2.71
10 11 6.579292 GCTACACGCATACATTTAAACAACAA 59.421 34.615 0.00 0.00 38.92 2.83
11 12 6.081049 GCTACACGCATACATTTAAACAACA 58.919 36.000 0.00 0.00 38.92 3.33
12 13 6.081049 TGCTACACGCATACATTTAAACAAC 58.919 36.000 0.00 0.00 45.47 3.32
13 14 6.242508 TGCTACACGCATACATTTAAACAA 57.757 33.333 0.00 0.00 45.47 2.83
14 15 5.864628 TGCTACACGCATACATTTAAACA 57.135 34.783 0.00 0.00 45.47 2.83
27 28 0.951040 GGCTATCCCATGCTACACGC 60.951 60.000 0.00 0.00 39.77 5.34
28 29 0.667487 CGGCTATCCCATGCTACACG 60.667 60.000 0.00 0.00 0.00 4.49
29 30 0.320771 CCGGCTATCCCATGCTACAC 60.321 60.000 0.00 0.00 0.00 2.90
30 31 2.057830 CCGGCTATCCCATGCTACA 58.942 57.895 0.00 0.00 0.00 2.74
31 32 1.376037 GCCGGCTATCCCATGCTAC 60.376 63.158 22.15 0.00 0.00 3.58
32 33 1.536418 AGCCGGCTATCCCATGCTA 60.536 57.895 31.86 0.00 39.00 3.49
33 34 2.851102 AGCCGGCTATCCCATGCT 60.851 61.111 31.86 0.00 36.73 3.79
34 35 2.359230 GAGCCGGCTATCCCATGC 60.359 66.667 32.97 10.84 0.00 4.06
35 36 2.348998 GGAGCCGGCTATCCCATG 59.651 66.667 32.97 0.00 0.00 3.66
39 40 2.056906 AATGTGGGAGCCGGCTATCC 62.057 60.000 32.97 31.65 34.64 2.59
40 41 0.603975 GAATGTGGGAGCCGGCTATC 60.604 60.000 32.97 24.29 0.00 2.08
41 42 1.451936 GAATGTGGGAGCCGGCTAT 59.548 57.895 32.97 16.85 0.00 2.97
42 43 2.908015 GAATGTGGGAGCCGGCTA 59.092 61.111 32.97 14.88 0.00 3.93
43 44 4.473520 CGAATGTGGGAGCCGGCT 62.474 66.667 33.48 33.48 0.00 5.52
44 45 4.778143 ACGAATGTGGGAGCCGGC 62.778 66.667 21.89 21.89 0.00 6.13
45 46 2.819595 CACGAATGTGGGAGCCGG 60.820 66.667 0.00 0.00 42.59 6.13
54 55 1.201647 CTAGTCCACGGACACGAATGT 59.798 52.381 18.21 0.00 46.76 2.71
55 56 1.909376 CTAGTCCACGGACACGAATG 58.091 55.000 18.21 0.00 46.76 2.67
56 57 0.172803 GCTAGTCCACGGACACGAAT 59.827 55.000 18.21 0.00 46.76 3.34
57 58 1.582968 GCTAGTCCACGGACACGAA 59.417 57.895 18.21 0.46 46.76 3.85
58 59 2.338015 GGCTAGTCCACGGACACGA 61.338 63.158 18.21 2.58 46.76 4.35
59 60 2.181021 GGCTAGTCCACGGACACG 59.819 66.667 18.21 9.28 46.76 4.49
60 61 2.181021 CGGCTAGTCCACGGACAC 59.819 66.667 18.21 7.11 46.76 3.67
61 62 2.034532 TCGGCTAGTCCACGGACA 59.965 61.111 18.21 3.95 46.76 4.02
62 63 2.488820 GTCGGCTAGTCCACGGAC 59.511 66.667 8.23 8.23 44.86 4.79
63 64 3.129502 CGTCGGCTAGTCCACGGA 61.130 66.667 6.60 0.00 36.44 4.69
64 65 4.189188 CCGTCGGCTAGTCCACGG 62.189 72.222 19.02 19.02 45.71 4.94
65 66 3.129502 TCCGTCGGCTAGTCCACG 61.130 66.667 7.57 7.57 38.34 4.94
66 67 2.267681 CTGTCCGTCGGCTAGTCCAC 62.268 65.000 6.34 0.00 34.01 4.02
67 68 2.034532 TGTCCGTCGGCTAGTCCA 59.965 61.111 6.34 0.00 34.01 4.02
68 69 1.102222 ATCTGTCCGTCGGCTAGTCC 61.102 60.000 6.34 0.00 0.00 3.85
69 70 0.029567 CATCTGTCCGTCGGCTAGTC 59.970 60.000 6.34 0.00 0.00 2.59
70 71 2.005960 GCATCTGTCCGTCGGCTAGT 62.006 60.000 6.34 0.00 0.00 2.57
71 72 1.299468 GCATCTGTCCGTCGGCTAG 60.299 63.158 6.34 7.33 0.00 3.42
72 73 2.805546 GCATCTGTCCGTCGGCTA 59.194 61.111 6.34 0.00 0.00 3.93
73 74 4.498520 CGCATCTGTCCGTCGGCT 62.499 66.667 6.34 0.00 0.00 5.52
75 76 4.873129 CCCGCATCTGTCCGTCGG 62.873 72.222 4.39 4.39 39.79 4.79
76 77 3.758088 CTCCCGCATCTGTCCGTCG 62.758 68.421 0.00 0.00 0.00 5.12
77 78 2.105128 CTCCCGCATCTGTCCGTC 59.895 66.667 0.00 0.00 0.00 4.79
78 79 3.461773 CCTCCCGCATCTGTCCGT 61.462 66.667 0.00 0.00 0.00 4.69
79 80 2.238847 TTTCCTCCCGCATCTGTCCG 62.239 60.000 0.00 0.00 0.00 4.79
80 81 0.181350 ATTTCCTCCCGCATCTGTCC 59.819 55.000 0.00 0.00 0.00 4.02
81 82 2.044123 AATTTCCTCCCGCATCTGTC 57.956 50.000 0.00 0.00 0.00 3.51
82 83 2.094675 CAAATTTCCTCCCGCATCTGT 58.905 47.619 0.00 0.00 0.00 3.41
83 84 1.406539 CCAAATTTCCTCCCGCATCTG 59.593 52.381 0.00 0.00 0.00 2.90
84 85 1.284785 TCCAAATTTCCTCCCGCATCT 59.715 47.619 0.00 0.00 0.00 2.90
85 86 1.678101 CTCCAAATTTCCTCCCGCATC 59.322 52.381 0.00 0.00 0.00 3.91
86 87 1.686115 CCTCCAAATTTCCTCCCGCAT 60.686 52.381 0.00 0.00 0.00 4.73
87 88 0.323360 CCTCCAAATTTCCTCCCGCA 60.323 55.000 0.00 0.00 0.00 5.69
88 89 0.323451 ACCTCCAAATTTCCTCCCGC 60.323 55.000 0.00 0.00 0.00 6.13
89 90 1.751437 GACCTCCAAATTTCCTCCCG 58.249 55.000 0.00 0.00 0.00 5.14
90 91 1.751437 CGACCTCCAAATTTCCTCCC 58.249 55.000 0.00 0.00 0.00 4.30
91 92 1.095600 GCGACCTCCAAATTTCCTCC 58.904 55.000 0.00 0.00 0.00 4.30
92 93 1.468914 GTGCGACCTCCAAATTTCCTC 59.531 52.381 0.00 0.00 0.00 3.71
93 94 1.534729 GTGCGACCTCCAAATTTCCT 58.465 50.000 0.00 0.00 0.00 3.36
94 95 0.526211 GGTGCGACCTCCAAATTTCC 59.474 55.000 0.00 0.00 34.73 3.13
105 106 0.317854 GTTGCTTTGAAGGTGCGACC 60.318 55.000 0.00 0.00 38.99 4.79
106 107 0.317854 GGTTGCTTTGAAGGTGCGAC 60.318 55.000 0.00 0.00 39.61 5.19
107 108 1.452145 GGGTTGCTTTGAAGGTGCGA 61.452 55.000 0.00 0.00 0.00 5.10
108 109 1.007387 GGGTTGCTTTGAAGGTGCG 60.007 57.895 0.00 0.00 0.00 5.34
109 110 0.315251 GAGGGTTGCTTTGAAGGTGC 59.685 55.000 0.00 0.00 0.00 5.01
110 111 1.691196 TGAGGGTTGCTTTGAAGGTG 58.309 50.000 0.00 0.00 0.00 4.00
111 112 2.452600 TTGAGGGTTGCTTTGAAGGT 57.547 45.000 0.00 0.00 0.00 3.50
112 113 2.546584 GCTTTGAGGGTTGCTTTGAAGG 60.547 50.000 0.00 0.00 0.00 3.46
113 114 2.747436 GCTTTGAGGGTTGCTTTGAAG 58.253 47.619 0.00 0.00 0.00 3.02
114 115 1.066908 CGCTTTGAGGGTTGCTTTGAA 59.933 47.619 0.00 0.00 0.00 2.69
115 116 0.667993 CGCTTTGAGGGTTGCTTTGA 59.332 50.000 0.00 0.00 0.00 2.69
116 117 0.940991 GCGCTTTGAGGGTTGCTTTG 60.941 55.000 0.00 0.00 0.00 2.77
117 118 1.363807 GCGCTTTGAGGGTTGCTTT 59.636 52.632 0.00 0.00 0.00 3.51
118 119 2.564721 GGCGCTTTGAGGGTTGCTT 61.565 57.895 7.64 0.00 0.00 3.91
119 120 2.985847 GGCGCTTTGAGGGTTGCT 60.986 61.111 7.64 0.00 0.00 3.91
120 121 4.056125 GGGCGCTTTGAGGGTTGC 62.056 66.667 7.64 0.00 0.00 4.17
121 122 3.737172 CGGGCGCTTTGAGGGTTG 61.737 66.667 7.64 0.00 0.00 3.77
122 123 2.193087 ATACGGGCGCTTTGAGGGTT 62.193 55.000 7.64 0.00 0.00 4.11
123 124 1.332144 TATACGGGCGCTTTGAGGGT 61.332 55.000 7.64 0.00 0.00 4.34
124 125 0.034896 ATATACGGGCGCTTTGAGGG 59.965 55.000 7.64 0.00 0.00 4.30
125 126 1.148310 CATATACGGGCGCTTTGAGG 58.852 55.000 7.64 0.00 0.00 3.86
126 127 1.792949 GACATATACGGGCGCTTTGAG 59.207 52.381 7.64 0.00 0.00 3.02
127 128 1.411246 AGACATATACGGGCGCTTTGA 59.589 47.619 7.64 0.00 0.00 2.69
128 129 1.792949 GAGACATATACGGGCGCTTTG 59.207 52.381 7.64 0.00 0.00 2.77
129 130 1.602165 CGAGACATATACGGGCGCTTT 60.602 52.381 7.64 0.00 0.00 3.51
130 131 0.039437 CGAGACATATACGGGCGCTT 60.039 55.000 7.64 0.00 0.00 4.68
131 132 1.170919 ACGAGACATATACGGGCGCT 61.171 55.000 7.64 0.00 0.00 5.92
132 133 0.728466 GACGAGACATATACGGGCGC 60.728 60.000 0.00 0.00 0.00 6.53
133 134 0.109873 GGACGAGACATATACGGGCG 60.110 60.000 0.00 0.00 0.00 6.13
134 135 0.109873 CGGACGAGACATATACGGGC 60.110 60.000 0.00 0.00 0.00 6.13
135 136 0.109873 GCGGACGAGACATATACGGG 60.110 60.000 0.00 0.00 0.00 5.28
136 137 0.589708 TGCGGACGAGACATATACGG 59.410 55.000 0.00 0.00 0.00 4.02
137 138 2.394545 TTGCGGACGAGACATATACG 57.605 50.000 0.00 0.00 0.00 3.06
138 139 3.639538 ACATTGCGGACGAGACATATAC 58.360 45.455 0.00 0.00 0.00 1.47
139 140 4.316205 AACATTGCGGACGAGACATATA 57.684 40.909 0.00 0.00 0.00 0.86
140 141 2.890808 ACATTGCGGACGAGACATAT 57.109 45.000 0.00 0.00 0.00 1.78
141 142 2.665649 AACATTGCGGACGAGACATA 57.334 45.000 0.00 0.00 0.00 2.29
142 143 1.808411 AAACATTGCGGACGAGACAT 58.192 45.000 0.00 0.00 0.00 3.06
143 144 2.063266 GTAAACATTGCGGACGAGACA 58.937 47.619 0.00 0.00 0.00 3.41
144 145 2.063266 TGTAAACATTGCGGACGAGAC 58.937 47.619 0.00 0.00 0.00 3.36
145 146 2.442212 TGTAAACATTGCGGACGAGA 57.558 45.000 0.00 0.00 0.00 4.04
146 147 2.670905 TGATGTAAACATTGCGGACGAG 59.329 45.455 0.00 0.00 36.57 4.18
147 148 2.413796 GTGATGTAAACATTGCGGACGA 59.586 45.455 0.00 0.00 36.57 4.20
148 149 2.415168 AGTGATGTAAACATTGCGGACG 59.585 45.455 0.00 0.00 36.57 4.79
149 150 4.419522 AAGTGATGTAAACATTGCGGAC 57.580 40.909 0.00 0.00 36.57 4.79
150 151 5.218885 CAAAAGTGATGTAAACATTGCGGA 58.781 37.500 0.00 0.00 36.57 5.54
151 152 4.143347 GCAAAAGTGATGTAAACATTGCGG 60.143 41.667 0.00 0.00 36.57 5.69
152 153 4.681025 AGCAAAAGTGATGTAAACATTGCG 59.319 37.500 9.81 0.00 42.55 4.85
153 154 7.009540 GGATAGCAAAAGTGATGTAAACATTGC 59.990 37.037 8.19 8.19 40.25 3.56
154 155 8.028354 TGGATAGCAAAAGTGATGTAAACATTG 58.972 33.333 0.00 0.00 36.57 2.82
155 156 8.121305 TGGATAGCAAAAGTGATGTAAACATT 57.879 30.769 0.00 0.00 36.57 2.71
156 157 7.701539 TGGATAGCAAAAGTGATGTAAACAT 57.298 32.000 0.00 0.00 39.70 2.71
157 158 7.367285 GTTGGATAGCAAAAGTGATGTAAACA 58.633 34.615 0.00 0.00 0.00 2.83
158 159 6.523201 CGTTGGATAGCAAAAGTGATGTAAAC 59.477 38.462 0.00 0.00 0.00 2.01
159 160 6.348950 CCGTTGGATAGCAAAAGTGATGTAAA 60.349 38.462 0.00 0.00 0.00 2.01
160 161 5.123186 CCGTTGGATAGCAAAAGTGATGTAA 59.877 40.000 0.00 0.00 0.00 2.41
161 162 4.634004 CCGTTGGATAGCAAAAGTGATGTA 59.366 41.667 0.00 0.00 0.00 2.29
162 163 3.440173 CCGTTGGATAGCAAAAGTGATGT 59.560 43.478 0.00 0.00 0.00 3.06
163 164 3.181497 CCCGTTGGATAGCAAAAGTGATG 60.181 47.826 0.00 0.00 0.00 3.07
164 165 3.016736 CCCGTTGGATAGCAAAAGTGAT 58.983 45.455 0.00 0.00 0.00 3.06
165 166 2.224670 ACCCGTTGGATAGCAAAAGTGA 60.225 45.455 0.00 0.00 34.81 3.41
166 167 2.159382 ACCCGTTGGATAGCAAAAGTG 58.841 47.619 0.00 0.00 34.81 3.16
167 168 2.433436 GACCCGTTGGATAGCAAAAGT 58.567 47.619 0.00 0.00 34.81 2.66
168 169 1.743394 GGACCCGTTGGATAGCAAAAG 59.257 52.381 0.00 0.00 34.81 2.27
169 170 1.074084 TGGACCCGTTGGATAGCAAAA 59.926 47.619 0.00 0.00 34.81 2.44
170 171 0.693622 TGGACCCGTTGGATAGCAAA 59.306 50.000 0.00 0.00 34.81 3.68
171 172 0.035820 GTGGACCCGTTGGATAGCAA 60.036 55.000 0.00 0.00 34.81 3.91
172 173 0.907704 AGTGGACCCGTTGGATAGCA 60.908 55.000 0.00 0.00 34.81 3.49
173 174 1.117150 TAGTGGACCCGTTGGATAGC 58.883 55.000 0.00 0.00 34.81 2.97
174 175 3.899052 TTTAGTGGACCCGTTGGATAG 57.101 47.619 0.00 0.00 34.81 2.08
175 176 3.520317 ACATTTAGTGGACCCGTTGGATA 59.480 43.478 0.00 0.00 34.81 2.59
176 177 2.307686 ACATTTAGTGGACCCGTTGGAT 59.692 45.455 0.00 0.00 34.81 3.41
177 178 1.700739 ACATTTAGTGGACCCGTTGGA 59.299 47.619 0.00 0.00 34.81 3.53
178 179 2.081462 GACATTTAGTGGACCCGTTGG 58.919 52.381 0.00 0.00 37.80 3.77
179 180 2.081462 GGACATTTAGTGGACCCGTTG 58.919 52.381 0.00 0.00 0.00 4.10
180 181 1.338389 CGGACATTTAGTGGACCCGTT 60.338 52.381 0.00 0.00 35.85 4.44
181 182 0.248289 CGGACATTTAGTGGACCCGT 59.752 55.000 0.00 0.00 35.85 5.28
182 183 1.087771 GCGGACATTTAGTGGACCCG 61.088 60.000 0.00 0.00 40.19 5.28
183 184 1.087771 CGCGGACATTTAGTGGACCC 61.088 60.000 0.00 0.00 0.00 4.46
184 185 1.087771 CCGCGGACATTTAGTGGACC 61.088 60.000 24.07 0.00 37.73 4.46
185 186 0.108520 TCCGCGGACATTTAGTGGAC 60.109 55.000 27.28 0.00 39.36 4.02
186 187 0.108520 GTCCGCGGACATTTAGTGGA 60.109 55.000 44.88 12.24 44.02 4.02
187 188 2.380081 GTCCGCGGACATTTAGTGG 58.620 57.895 44.88 8.87 44.02 4.00
202 203 1.103803 TCAGACATGCGGACTAGTCC 58.896 55.000 29.18 29.18 46.18 3.85
203 204 2.164624 ACTTCAGACATGCGGACTAGTC 59.835 50.000 14.87 14.87 0.00 2.59
204 205 2.171840 ACTTCAGACATGCGGACTAGT 58.828 47.619 0.00 0.00 0.00 2.57
205 206 2.949451 ACTTCAGACATGCGGACTAG 57.051 50.000 0.00 0.00 0.00 2.57
206 207 2.415491 CGAACTTCAGACATGCGGACTA 60.415 50.000 0.00 0.00 0.00 2.59
207 208 1.670087 CGAACTTCAGACATGCGGACT 60.670 52.381 0.00 0.00 0.00 3.85
208 209 0.716108 CGAACTTCAGACATGCGGAC 59.284 55.000 0.00 0.00 0.00 4.79
209 210 0.601057 TCGAACTTCAGACATGCGGA 59.399 50.000 0.00 0.00 0.00 5.54
210 211 1.645034 ATCGAACTTCAGACATGCGG 58.355 50.000 0.00 0.00 0.00 5.69
211 212 5.215903 AGTATATCGAACTTCAGACATGCG 58.784 41.667 0.00 0.00 0.00 4.73
212 213 6.306837 GCTAGTATATCGAACTTCAGACATGC 59.693 42.308 0.00 0.00 0.00 4.06
213 214 6.804295 GGCTAGTATATCGAACTTCAGACATG 59.196 42.308 0.00 0.00 0.00 3.21
214 215 6.348622 CGGCTAGTATATCGAACTTCAGACAT 60.349 42.308 0.00 0.00 0.00 3.06
215 216 5.049612 CGGCTAGTATATCGAACTTCAGACA 60.050 44.000 0.00 0.00 0.00 3.41
216 217 5.383958 CGGCTAGTATATCGAACTTCAGAC 58.616 45.833 0.00 0.00 0.00 3.51
217 218 4.083431 GCGGCTAGTATATCGAACTTCAGA 60.083 45.833 0.00 0.00 0.00 3.27
218 219 4.159857 GCGGCTAGTATATCGAACTTCAG 58.840 47.826 0.00 0.00 0.00 3.02
219 220 3.566742 TGCGGCTAGTATATCGAACTTCA 59.433 43.478 0.00 0.00 0.00 3.02
220 221 4.156664 TGCGGCTAGTATATCGAACTTC 57.843 45.455 0.00 0.00 0.00 3.01
221 222 4.579454 TTGCGGCTAGTATATCGAACTT 57.421 40.909 0.00 0.00 0.00 2.66
222 223 4.037684 AGTTTGCGGCTAGTATATCGAACT 59.962 41.667 0.00 0.00 0.00 3.01
223 224 4.296690 AGTTTGCGGCTAGTATATCGAAC 58.703 43.478 0.00 0.00 0.00 3.95
224 225 4.579454 AGTTTGCGGCTAGTATATCGAA 57.421 40.909 0.00 0.00 0.00 3.71
225 226 4.037089 TCAAGTTTGCGGCTAGTATATCGA 59.963 41.667 0.00 0.00 0.00 3.59
226 227 4.295870 TCAAGTTTGCGGCTAGTATATCG 58.704 43.478 0.00 0.00 0.00 2.92
227 228 4.686554 CCTCAAGTTTGCGGCTAGTATATC 59.313 45.833 0.00 0.00 0.00 1.63
228 229 4.344102 TCCTCAAGTTTGCGGCTAGTATAT 59.656 41.667 0.00 0.00 33.15 0.86
229 230 3.702548 TCCTCAAGTTTGCGGCTAGTATA 59.297 43.478 0.00 0.00 33.15 1.47
230 231 2.500098 TCCTCAAGTTTGCGGCTAGTAT 59.500 45.455 0.00 0.00 33.15 2.12
231 232 1.897133 TCCTCAAGTTTGCGGCTAGTA 59.103 47.619 0.00 0.00 33.15 1.82
232 233 0.685097 TCCTCAAGTTTGCGGCTAGT 59.315 50.000 0.00 0.00 33.15 2.57
233 234 1.079503 GTCCTCAAGTTTGCGGCTAG 58.920 55.000 0.00 0.00 33.15 3.42
234 235 0.669318 CGTCCTCAAGTTTGCGGCTA 60.669 55.000 0.00 0.00 33.15 3.93
235 236 1.961277 CGTCCTCAAGTTTGCGGCT 60.961 57.895 0.00 0.00 33.15 5.52
236 237 1.782028 AACGTCCTCAAGTTTGCGGC 61.782 55.000 0.00 0.00 33.15 6.53
237 238 0.661020 AAACGTCCTCAAGTTTGCGG 59.339 50.000 0.00 0.00 38.90 5.69
238 239 2.108700 CAAAACGTCCTCAAGTTTGCG 58.891 47.619 0.00 0.00 40.07 4.85
239 240 1.852280 GCAAAACGTCCTCAAGTTTGC 59.148 47.619 13.84 13.84 40.07 3.68
240 241 2.108700 CGCAAAACGTCCTCAAGTTTG 58.891 47.619 0.00 0.00 40.07 2.93
241 242 1.064952 CCGCAAAACGTCCTCAAGTTT 59.935 47.619 0.00 0.00 41.72 2.66
242 243 0.661020 CCGCAAAACGTCCTCAAGTT 59.339 50.000 0.00 0.00 41.42 2.66
259 260 1.373497 GCAGATATCTGGACGCCCG 60.373 63.158 29.43 6.48 43.94 6.13
261 262 1.270518 ACATGCAGATATCTGGACGCC 60.271 52.381 29.43 15.49 46.89 5.68
269 270 5.581126 TTTTGGTTGGACATGCAGATATC 57.419 39.130 0.00 0.00 0.00 1.63
271 272 3.193267 GCTTTTGGTTGGACATGCAGATA 59.807 43.478 0.00 0.00 0.00 1.98
307 308 2.142356 TGCTGGAGAGAGAAGAGAGG 57.858 55.000 0.00 0.00 0.00 3.69
308 309 2.159198 GCTTGCTGGAGAGAGAAGAGAG 60.159 54.545 0.00 0.00 0.00 3.20
309 310 1.824230 GCTTGCTGGAGAGAGAAGAGA 59.176 52.381 0.00 0.00 0.00 3.10
310 311 1.469595 CGCTTGCTGGAGAGAGAAGAG 60.470 57.143 0.00 0.00 0.00 2.85
314 315 2.575993 GCGCTTGCTGGAGAGAGA 59.424 61.111 0.00 0.00 35.07 3.10
316 317 4.441695 CCGCGCTTGCTGGAGAGA 62.442 66.667 5.56 0.00 35.26 3.10
322 323 4.093952 CTTCCACCGCGCTTGCTG 62.094 66.667 5.56 0.00 36.08 4.41
323 324 4.314440 TCTTCCACCGCGCTTGCT 62.314 61.111 5.56 0.00 36.08 3.91
326 327 1.961277 CTTGTCTTCCACCGCGCTT 60.961 57.895 5.56 0.00 0.00 4.68
330 331 1.576421 CTTGCTTGTCTTCCACCGC 59.424 57.895 0.00 0.00 0.00 5.68
334 335 0.392706 TCGAGCTTGCTTGTCTTCCA 59.607 50.000 9.41 0.00 0.00 3.53
335 336 1.074752 CTCGAGCTTGCTTGTCTTCC 58.925 55.000 0.00 0.00 0.00 3.46
338 339 4.275524 GCTCGAGCTTGCTTGTCT 57.724 55.556 29.88 0.00 38.21 3.41
365 374 1.462731 TTTGTGTCCATGGCCACTGC 61.463 55.000 25.21 9.04 32.76 4.40
369 378 0.755686 GGTTTTTGTGTCCATGGCCA 59.244 50.000 8.56 8.56 0.00 5.36
370 379 0.755686 TGGTTTTTGTGTCCATGGCC 59.244 50.000 6.96 0.00 0.00 5.36
380 389 1.625818 TGTGTGGGCTTTGGTTTTTGT 59.374 42.857 0.00 0.00 0.00 2.83
395 404 0.391661 CTCCGGGATCCTTGTGTGTG 60.392 60.000 12.58 0.00 0.00 3.82
396 405 0.836400 ACTCCGGGATCCTTGTGTGT 60.836 55.000 12.58 2.41 0.00 3.72
404 413 0.466124 CCAAGAGAACTCCGGGATCC 59.534 60.000 1.92 1.92 0.00 3.36
420 429 1.825622 TCATGCACGTTGTGGCCAA 60.826 52.632 7.24 0.00 33.64 4.52
481 501 3.379445 ACGAACCGACCGCATCCT 61.379 61.111 0.00 0.00 0.00 3.24
490 510 1.305129 TACCCATCCCACGAACCGA 60.305 57.895 0.00 0.00 0.00 4.69
491 511 1.153509 GTACCCATCCCACGAACCG 60.154 63.158 0.00 0.00 0.00 4.44
495 515 1.342574 TGATCTGTACCCATCCCACGA 60.343 52.381 0.00 0.00 0.00 4.35
516 536 6.187727 ACTGATTGTGAGACTTTTTCCCTA 57.812 37.500 0.00 0.00 0.00 3.53
517 537 5.053978 ACTGATTGTGAGACTTTTTCCCT 57.946 39.130 0.00 0.00 0.00 4.20
519 539 6.231211 TCCTACTGATTGTGAGACTTTTTCC 58.769 40.000 0.00 0.00 0.00 3.13
523 543 6.174720 TGTTCCTACTGATTGTGAGACTTT 57.825 37.500 0.00 0.00 0.00 2.66
538 558 6.314896 CCTGTGATTGAGAGATTTGTTCCTAC 59.685 42.308 0.00 0.00 0.00 3.18
562 582 4.137543 ACTTGTGATTGAGAGTTGTTCCC 58.862 43.478 0.00 0.00 0.00 3.97
579 599 3.874543 TGACGACATAAGCAACAACTTGT 59.125 39.130 0.00 0.00 0.00 3.16
580 600 4.466567 TGACGACATAAGCAACAACTTG 57.533 40.909 0.00 0.00 0.00 3.16
606 626 1.872234 CGGACACACGCCATCTACG 60.872 63.158 0.00 0.00 0.00 3.51
609 629 2.048222 CACGGACACACGCCATCT 60.048 61.111 0.00 0.00 37.37 2.90
611 631 4.314440 AGCACGGACACACGCCAT 62.314 61.111 0.00 0.00 37.37 4.40
621 641 1.110518 TGTGTGTACTGGAGCACGGA 61.111 55.000 0.00 0.00 38.36 4.69
652 680 5.640732 GGATCTTGTTCATGTACGCATTTT 58.359 37.500 0.00 0.00 31.99 1.82
660 688 6.761242 CCTATTTGTCGGATCTTGTTCATGTA 59.239 38.462 0.00 0.00 0.00 2.29
661 689 5.586243 CCTATTTGTCGGATCTTGTTCATGT 59.414 40.000 0.00 0.00 0.00 3.21
662 690 5.817296 TCCTATTTGTCGGATCTTGTTCATG 59.183 40.000 0.00 0.00 0.00 3.07
663 691 5.989477 TCCTATTTGTCGGATCTTGTTCAT 58.011 37.500 0.00 0.00 0.00 2.57
664 692 5.414789 TCCTATTTGTCGGATCTTGTTCA 57.585 39.130 0.00 0.00 0.00 3.18
665 693 6.737254 TTTCCTATTTGTCGGATCTTGTTC 57.263 37.500 0.00 0.00 0.00 3.18
667 695 7.611855 AGATTTTTCCTATTTGTCGGATCTTGT 59.388 33.333 0.00 0.00 0.00 3.16
668 696 7.912250 CAGATTTTTCCTATTTGTCGGATCTTG 59.088 37.037 0.00 0.00 0.00 3.02
670 698 7.338710 TCAGATTTTTCCTATTTGTCGGATCT 58.661 34.615 0.00 0.00 0.00 2.75
671 699 7.553881 TCAGATTTTTCCTATTTGTCGGATC 57.446 36.000 0.00 0.00 0.00 3.36
672 700 9.277783 CTATCAGATTTTTCCTATTTGTCGGAT 57.722 33.333 0.00 0.00 0.00 4.18
673 701 7.226720 GCTATCAGATTTTTCCTATTTGTCGGA 59.773 37.037 0.00 0.00 0.00 4.55
674 702 7.227512 AGCTATCAGATTTTTCCTATTTGTCGG 59.772 37.037 0.00 0.00 0.00 4.79
675 703 8.147642 AGCTATCAGATTTTTCCTATTTGTCG 57.852 34.615 0.00 0.00 0.00 4.35
692 720 4.331992 CGGCCATTCAATCATAGCTATCAG 59.668 45.833 2.34 0.00 0.00 2.90
698 726 0.242017 GCCGGCCATTCAATCATAGC 59.758 55.000 18.11 0.00 0.00 2.97
719 747 4.909678 TGGAAACACCATTGCGGA 57.090 50.000 0.00 0.00 44.64 5.54
735 774 0.032130 CGACGGTGTCCCCTGATATG 59.968 60.000 0.00 0.00 0.00 1.78
736 775 1.113517 CCGACGGTGTCCCCTGATAT 61.114 60.000 5.48 0.00 0.00 1.63
753 800 1.300931 ATACACTATGCGCTGCCCG 60.301 57.895 9.73 0.00 40.75 6.13
755 802 1.143305 CTCATACACTATGCGCTGCC 58.857 55.000 9.73 0.00 36.14 4.85
767 814 4.325119 GCCCTCGAGTAGTATCTCATACA 58.675 47.826 12.31 0.00 38.21 2.29
768 815 3.690628 GGCCCTCGAGTAGTATCTCATAC 59.309 52.174 12.31 0.00 34.46 2.39
771 818 1.202903 GGGCCCTCGAGTAGTATCTCA 60.203 57.143 17.04 0.00 34.46 3.27
790 837 0.471617 CTCATTCCCTAGTGCCTGGG 59.528 60.000 0.00 0.00 44.66 4.45
796 854 0.749649 AGCGCTCTCATTCCCTAGTG 59.250 55.000 2.64 0.00 0.00 2.74
803 861 2.285827 ACACTGTAGCGCTCTCATTC 57.714 50.000 16.34 0.00 0.00 2.67
804 862 2.232452 AGAACACTGTAGCGCTCTCATT 59.768 45.455 16.34 6.36 0.00 2.57
809 867 2.161808 TCTGTAGAACACTGTAGCGCTC 59.838 50.000 16.34 6.54 0.00 5.03
824 882 3.679980 CACCCACGATTGTTTCTCTGTAG 59.320 47.826 0.00 0.00 0.00 2.74
833 891 2.281484 AGCGCACCCACGATTGTT 60.281 55.556 11.47 0.00 34.06 2.83
876 934 0.527565 CTGCTTTTTAGCCGGTGCAT 59.472 50.000 1.90 0.00 41.13 3.96
883 941 2.159324 GCTGTGGATCTGCTTTTTAGCC 60.159 50.000 0.00 0.00 37.88 3.93
916 974 1.257750 ACATGGAGCACACTCGGCTA 61.258 55.000 0.00 0.00 44.48 3.93
919 977 0.036952 AGAACATGGAGCACACTCGG 60.037 55.000 0.00 0.00 44.48 4.63
921 979 3.601443 ACTAGAACATGGAGCACACTC 57.399 47.619 0.00 0.00 42.66 3.51
955 1013 7.821846 GGAATCACTCCATCTATCTATCAAACC 59.178 40.741 0.00 0.00 44.67 3.27
956 1014 8.770438 GGAATCACTCCATCTATCTATCAAAC 57.230 38.462 0.00 0.00 44.67 2.93
992 1059 2.825532 AGCTCTTATAGGCAGCTAGCTC 59.174 50.000 16.15 9.87 41.84 4.09
1056 1123 5.404395 AGAGTATATGGGGTCTAGGGTTTC 58.596 45.833 0.00 0.00 0.00 2.78
1085 1152 2.826128 TCTCACGGATGCTTAACAGAGT 59.174 45.455 0.00 0.00 0.00 3.24
1223 1319 1.143620 CTCTACCTCAGGCTGCTGC 59.856 63.158 10.34 7.10 38.76 5.25
1224 1320 1.143620 GCTCTACCTCAGGCTGCTG 59.856 63.158 10.34 5.56 0.00 4.41
1225 1321 2.422231 CGCTCTACCTCAGGCTGCT 61.422 63.158 10.34 0.00 0.00 4.24
1226 1322 2.105930 CGCTCTACCTCAGGCTGC 59.894 66.667 10.34 0.00 0.00 5.25
1227 1323 1.140589 CACGCTCTACCTCAGGCTG 59.859 63.158 8.58 8.58 0.00 4.85
1228 1324 1.304547 ACACGCTCTACCTCAGGCT 60.305 57.895 0.00 0.00 0.00 4.58
1229 1325 1.153745 CACACGCTCTACCTCAGGC 60.154 63.158 0.00 0.00 0.00 4.85
1230 1326 1.513158 CCACACGCTCTACCTCAGG 59.487 63.158 0.00 0.00 0.00 3.86
1231 1327 1.513158 CCCACACGCTCTACCTCAG 59.487 63.158 0.00 0.00 0.00 3.35
1232 1328 2.646175 GCCCACACGCTCTACCTCA 61.646 63.158 0.00 0.00 0.00 3.86
1233 1329 2.184579 GCCCACACGCTCTACCTC 59.815 66.667 0.00 0.00 0.00 3.85
1234 1330 3.760035 CGCCCACACGCTCTACCT 61.760 66.667 0.00 0.00 0.00 3.08
1235 1331 4.814294 CCGCCCACACGCTCTACC 62.814 72.222 0.00 0.00 0.00 3.18
1249 1345 3.395470 CTAAACACATGGCCGCCGC 62.395 63.158 4.58 0.00 0.00 6.53
1250 1346 1.095228 ATCTAAACACATGGCCGCCG 61.095 55.000 4.58 0.00 0.00 6.46
1251 1347 0.381801 CATCTAAACACATGGCCGCC 59.618 55.000 1.04 1.04 0.00 6.13
1252 1348 0.248621 GCATCTAAACACATGGCCGC 60.249 55.000 0.00 0.00 0.00 6.53
1253 1349 1.331756 GAGCATCTAAACACATGGCCG 59.668 52.381 0.00 0.00 0.00 6.13
1254 1350 2.368439 TGAGCATCTAAACACATGGCC 58.632 47.619 0.00 0.00 34.92 5.36
1255 1351 3.794475 GCATGAGCATCTAAACACATGGC 60.794 47.826 0.00 0.00 41.58 4.40
1256 1352 3.961182 GCATGAGCATCTAAACACATGG 58.039 45.455 0.00 0.00 41.58 3.66
1270 1366 2.082366 CGCGTGGTTTTGCATGAGC 61.082 57.895 0.00 0.00 42.57 4.26
1271 1367 0.725784 GTCGCGTGGTTTTGCATGAG 60.726 55.000 5.77 0.00 0.00 2.90
1272 1368 1.281353 GTCGCGTGGTTTTGCATGA 59.719 52.632 5.77 0.00 0.00 3.07
1273 1369 0.387112 ATGTCGCGTGGTTTTGCATG 60.387 50.000 5.77 0.00 0.00 4.06
1274 1370 0.313672 AATGTCGCGTGGTTTTGCAT 59.686 45.000 5.77 0.00 0.00 3.96
1275 1371 0.593518 CAATGTCGCGTGGTTTTGCA 60.594 50.000 5.77 0.00 0.00 4.08
1276 1372 0.593773 ACAATGTCGCGTGGTTTTGC 60.594 50.000 5.77 0.00 0.00 3.68
1277 1373 1.516453 CAACAATGTCGCGTGGTTTTG 59.484 47.619 5.77 7.19 0.00 2.44
1278 1374 1.133407 ACAACAATGTCGCGTGGTTTT 59.867 42.857 5.77 0.00 33.41 2.43
1279 1375 0.736053 ACAACAATGTCGCGTGGTTT 59.264 45.000 5.77 0.00 33.41 3.27
1280 1376 0.028770 CACAACAATGTCGCGTGGTT 59.971 50.000 5.77 1.87 37.82 3.67
1281 1377 1.092921 ACACAACAATGTCGCGTGGT 61.093 50.000 5.77 0.00 37.82 4.16
1282 1378 0.657077 CACACAACAATGTCGCGTGG 60.657 55.000 5.77 0.00 37.82 4.94
1283 1379 0.303191 TCACACAACAATGTCGCGTG 59.697 50.000 5.77 0.00 37.82 5.34
1284 1380 0.303493 GTCACACAACAATGTCGCGT 59.697 50.000 5.77 0.00 37.82 6.01
1285 1381 0.384230 GGTCACACAACAATGTCGCG 60.384 55.000 0.00 0.00 37.82 5.87
1286 1382 0.660488 TGGTCACACAACAATGTCGC 59.340 50.000 0.00 0.00 37.82 5.19
1287 1383 3.064682 TCTTTGGTCACACAACAATGTCG 59.935 43.478 0.00 0.00 37.82 4.35
1288 1384 4.630894 TCTTTGGTCACACAACAATGTC 57.369 40.909 0.00 0.00 37.82 3.06
1289 1385 6.061441 TCTATCTTTGGTCACACAACAATGT 58.939 36.000 0.00 0.00 41.61 2.71
1290 1386 6.558771 TCTATCTTTGGTCACACAACAATG 57.441 37.500 0.00 0.00 0.00 2.82
1291 1387 7.765695 AATCTATCTTTGGTCACACAACAAT 57.234 32.000 0.00 0.00 0.00 2.71
1292 1388 7.581213 AAATCTATCTTTGGTCACACAACAA 57.419 32.000 0.00 0.00 0.00 2.83
1293 1389 7.068103 ACAAAATCTATCTTTGGTCACACAACA 59.932 33.333 0.89 0.00 37.96 3.33
1294 1390 7.425606 ACAAAATCTATCTTTGGTCACACAAC 58.574 34.615 0.89 0.00 37.96 3.32
1295 1391 7.581213 ACAAAATCTATCTTTGGTCACACAA 57.419 32.000 0.89 0.00 37.96 3.33
1296 1392 7.581213 AACAAAATCTATCTTTGGTCACACA 57.419 32.000 0.89 0.00 37.96 3.72
1297 1393 9.612620 CTAAACAAAATCTATCTTTGGTCACAC 57.387 33.333 0.89 0.00 37.96 3.82
1298 1394 9.349713 ACTAAACAAAATCTATCTTTGGTCACA 57.650 29.630 0.89 0.00 37.96 3.58
1314 1410 9.533253 AGCGTCTAAAGTACTTACTAAACAAAA 57.467 29.630 8.92 0.00 34.99 2.44
1315 1411 9.185192 GAGCGTCTAAAGTACTTACTAAACAAA 57.815 33.333 8.92 0.00 34.99 2.83
1316 1412 8.352201 TGAGCGTCTAAAGTACTTACTAAACAA 58.648 33.333 8.92 0.00 34.99 2.83
1317 1413 7.874940 TGAGCGTCTAAAGTACTTACTAAACA 58.125 34.615 8.92 1.03 34.99 2.83
1318 1414 8.733857 TTGAGCGTCTAAAGTACTTACTAAAC 57.266 34.615 8.92 2.95 34.99 2.01
1319 1415 9.918630 ATTTGAGCGTCTAAAGTACTTACTAAA 57.081 29.630 8.92 4.03 34.99 1.85
1322 1418 9.918630 TTTATTTGAGCGTCTAAAGTACTTACT 57.081 29.630 8.92 0.00 38.39 2.24
1327 1423 9.821662 ACATTTTTATTTGAGCGTCTAAAGTAC 57.178 29.630 0.00 0.00 0.00 2.73
1329 1425 9.744468 AAACATTTTTATTTGAGCGTCTAAAGT 57.256 25.926 0.00 0.00 0.00 2.66
1331 1427 8.897809 CGAAACATTTTTATTTGAGCGTCTAAA 58.102 29.630 0.00 0.00 0.00 1.85
1332 1428 8.071368 ACGAAACATTTTTATTTGAGCGTCTAA 58.929 29.630 0.00 0.00 0.00 2.10
1333 1429 7.577979 ACGAAACATTTTTATTTGAGCGTCTA 58.422 30.769 0.00 0.00 0.00 2.59
1334 1430 6.435428 ACGAAACATTTTTATTTGAGCGTCT 58.565 32.000 0.00 0.00 0.00 4.18
1335 1431 6.669485 ACGAAACATTTTTATTTGAGCGTC 57.331 33.333 0.00 0.00 0.00 5.19
1336 1432 8.736751 ATAACGAAACATTTTTATTTGAGCGT 57.263 26.923 0.00 0.00 0.00 5.07
1337 1433 9.656834 GAATAACGAAACATTTTTATTTGAGCG 57.343 29.630 0.00 0.00 0.00 5.03
1355 1451 8.227791 GCACAAAATAGAAGAGTTGAATAACGA 58.772 33.333 0.00 0.00 41.71 3.85
1356 1452 8.015087 TGCACAAAATAGAAGAGTTGAATAACG 58.985 33.333 0.00 0.00 41.71 3.18
1357 1453 9.677567 TTGCACAAAATAGAAGAGTTGAATAAC 57.322 29.630 0.00 0.00 37.06 1.89
1360 1456 9.199982 CAATTGCACAAAATAGAAGAGTTGAAT 57.800 29.630 0.00 0.00 0.00 2.57
1361 1457 8.196771 ACAATTGCACAAAATAGAAGAGTTGAA 58.803 29.630 5.05 0.00 0.00 2.69
1362 1458 7.715657 ACAATTGCACAAAATAGAAGAGTTGA 58.284 30.769 5.05 0.00 0.00 3.18
1363 1459 7.935338 ACAATTGCACAAAATAGAAGAGTTG 57.065 32.000 5.05 0.00 0.00 3.16
1364 1460 8.819974 CAAACAATTGCACAAAATAGAAGAGTT 58.180 29.630 5.05 0.00 0.00 3.01
1365 1461 7.981225 ACAAACAATTGCACAAAATAGAAGAGT 59.019 29.630 5.05 0.00 40.34 3.24
1366 1462 8.356533 ACAAACAATTGCACAAAATAGAAGAG 57.643 30.769 5.05 0.00 40.34 2.85
1367 1463 9.462174 CTACAAACAATTGCACAAAATAGAAGA 57.538 29.630 5.05 0.00 40.34 2.87
1368 1464 9.248291 ACTACAAACAATTGCACAAAATAGAAG 57.752 29.630 5.05 0.00 40.34 2.85
1369 1465 9.593134 AACTACAAACAATTGCACAAAATAGAA 57.407 25.926 5.05 0.00 40.34 2.10
1370 1466 9.029243 CAACTACAAACAATTGCACAAAATAGA 57.971 29.630 5.05 0.00 40.34 1.98
1371 1467 7.793427 GCAACTACAAACAATTGCACAAAATAG 59.207 33.333 5.05 1.80 45.38 1.73
1372 1468 7.625553 GCAACTACAAACAATTGCACAAAATA 58.374 30.769 5.05 0.00 45.38 1.40
1373 1469 6.485393 GCAACTACAAACAATTGCACAAAAT 58.515 32.000 5.05 0.00 45.38 1.82
1374 1470 5.862811 GCAACTACAAACAATTGCACAAAA 58.137 33.333 5.05 0.00 45.38 2.44
1375 1471 5.462034 GCAACTACAAACAATTGCACAAA 57.538 34.783 5.05 0.00 45.38 2.83
1380 1476 3.976169 TCCTGCAACTACAAACAATTGC 58.024 40.909 5.05 0.94 46.08 3.56
1381 1477 5.215160 GTCTCCTGCAACTACAAACAATTG 58.785 41.667 3.24 3.24 42.46 2.32
1382 1478 4.278419 GGTCTCCTGCAACTACAAACAATT 59.722 41.667 0.00 0.00 0.00 2.32
1383 1479 3.821033 GGTCTCCTGCAACTACAAACAAT 59.179 43.478 0.00 0.00 0.00 2.71
1384 1480 3.211045 GGTCTCCTGCAACTACAAACAA 58.789 45.455 0.00 0.00 0.00 2.83
1385 1481 2.171659 TGGTCTCCTGCAACTACAAACA 59.828 45.455 0.00 0.00 0.00 2.83
1386 1482 2.846193 TGGTCTCCTGCAACTACAAAC 58.154 47.619 0.00 0.00 0.00 2.93
1387 1483 3.327757 AGATGGTCTCCTGCAACTACAAA 59.672 43.478 0.00 0.00 0.00 2.83
1388 1484 2.906389 AGATGGTCTCCTGCAACTACAA 59.094 45.455 0.00 0.00 0.00 2.41
1389 1485 2.540383 AGATGGTCTCCTGCAACTACA 58.460 47.619 0.00 0.00 0.00 2.74
1390 1486 3.702045 ACTAGATGGTCTCCTGCAACTAC 59.298 47.826 0.00 0.00 0.00 2.73
1391 1487 3.954904 GACTAGATGGTCTCCTGCAACTA 59.045 47.826 0.00 0.00 33.81 2.24
1392 1488 2.763448 GACTAGATGGTCTCCTGCAACT 59.237 50.000 0.00 0.00 33.81 3.16
1393 1489 2.497675 TGACTAGATGGTCTCCTGCAAC 59.502 50.000 0.00 0.00 37.16 4.17
1394 1490 2.820178 TGACTAGATGGTCTCCTGCAA 58.180 47.619 0.00 0.00 37.16 4.08
1395 1491 2.532250 TGACTAGATGGTCTCCTGCA 57.468 50.000 0.00 0.00 37.16 4.41
1396 1492 3.230134 AGATGACTAGATGGTCTCCTGC 58.770 50.000 0.00 0.00 37.16 4.85
1397 1493 4.454161 CGTAGATGACTAGATGGTCTCCTG 59.546 50.000 0.00 0.00 37.16 3.86
1398 1494 4.103469 ACGTAGATGACTAGATGGTCTCCT 59.897 45.833 0.00 0.00 37.16 3.69
1399 1495 4.391155 ACGTAGATGACTAGATGGTCTCC 58.609 47.826 0.00 0.00 37.16 3.71
1400 1496 6.457355 TCTACGTAGATGACTAGATGGTCTC 58.543 44.000 21.25 0.00 37.16 3.36
1401 1497 6.422344 TCTACGTAGATGACTAGATGGTCT 57.578 41.667 21.25 0.00 37.16 3.85
1402 1498 7.604927 AGAATCTACGTAGATGACTAGATGGTC 59.395 40.741 32.96 22.70 41.96 4.02
1403 1499 7.455058 AGAATCTACGTAGATGACTAGATGGT 58.545 38.462 32.96 16.71 41.96 3.55
1404 1500 7.915293 AGAATCTACGTAGATGACTAGATGG 57.085 40.000 32.96 1.24 41.96 3.51
1405 1501 9.093970 CCTAGAATCTACGTAGATGACTAGATG 57.906 40.741 39.71 31.25 43.53 2.90
1406 1502 9.038072 TCCTAGAATCTACGTAGATGACTAGAT 57.962 37.037 39.71 27.46 43.53 1.98
1407 1503 8.419922 TCCTAGAATCTACGTAGATGACTAGA 57.580 38.462 39.71 31.73 43.53 2.43
1408 1504 7.277098 GCTCCTAGAATCTACGTAGATGACTAG 59.723 44.444 36.37 36.37 41.96 2.57
1409 1505 7.098477 GCTCCTAGAATCTACGTAGATGACTA 58.902 42.308 32.96 30.91 41.96 2.59
1410 1506 5.935789 GCTCCTAGAATCTACGTAGATGACT 59.064 44.000 32.96 31.32 41.96 3.41
1411 1507 5.122711 GGCTCCTAGAATCTACGTAGATGAC 59.877 48.000 32.96 27.62 41.96 3.06
1412 1508 5.221864 TGGCTCCTAGAATCTACGTAGATGA 60.222 44.000 32.96 24.14 41.96 2.92
1413 1509 5.004448 TGGCTCCTAGAATCTACGTAGATG 58.996 45.833 32.96 21.75 41.96 2.90
1414 1510 5.244189 TGGCTCCTAGAATCTACGTAGAT 57.756 43.478 28.45 28.45 44.54 1.98
1415 1511 4.643463 CTGGCTCCTAGAATCTACGTAGA 58.357 47.826 26.55 26.55 36.65 2.59
1416 1512 3.189702 GCTGGCTCCTAGAATCTACGTAG 59.810 52.174 16.73 16.73 0.00 3.51
1417 1513 3.147629 GCTGGCTCCTAGAATCTACGTA 58.852 50.000 0.00 0.00 0.00 3.57
1418 1514 1.957877 GCTGGCTCCTAGAATCTACGT 59.042 52.381 0.00 0.00 0.00 3.57
1419 1515 2.030363 CAGCTGGCTCCTAGAATCTACG 60.030 54.545 5.57 0.00 0.00 3.51
1420 1516 2.288763 GCAGCTGGCTCCTAGAATCTAC 60.289 54.545 17.12 0.00 40.25 2.59
1421 1517 1.967066 GCAGCTGGCTCCTAGAATCTA 59.033 52.381 17.12 0.00 40.25 1.98
1422 1518 0.758123 GCAGCTGGCTCCTAGAATCT 59.242 55.000 17.12 0.00 40.25 2.40
1423 1519 0.599728 CGCAGCTGGCTCCTAGAATC 60.600 60.000 17.12 0.00 41.67 2.52
1424 1520 1.045350 TCGCAGCTGGCTCCTAGAAT 61.045 55.000 17.12 0.00 41.67 2.40
1425 1521 1.670949 CTCGCAGCTGGCTCCTAGAA 61.671 60.000 17.12 0.00 41.67 2.10
1426 1522 2.043953 TCGCAGCTGGCTCCTAGA 60.044 61.111 17.12 0.00 41.67 2.43
1427 1523 2.416678 CTCGCAGCTGGCTCCTAG 59.583 66.667 17.12 0.00 41.67 3.02
1428 1524 3.842923 GCTCGCAGCTGGCTCCTA 61.843 66.667 17.12 0.00 41.67 2.94
1430 1526 4.853050 ATGCTCGCAGCTGGCTCC 62.853 66.667 17.12 0.00 42.97 4.70
1431 1527 3.574445 CATGCTCGCAGCTGGCTC 61.574 66.667 17.12 0.00 42.97 4.70
1432 1528 4.405671 ACATGCTCGCAGCTGGCT 62.406 61.111 17.12 0.00 42.97 4.75
1433 1529 4.175489 CACATGCTCGCAGCTGGC 62.175 66.667 17.12 11.26 42.97 4.85
1434 1530 2.745100 ACACATGCTCGCAGCTGG 60.745 61.111 17.12 5.82 42.97 4.85
1435 1531 1.740664 AGACACATGCTCGCAGCTG 60.741 57.895 10.11 10.11 42.97 4.24
1436 1532 1.740664 CAGACACATGCTCGCAGCT 60.741 57.895 9.12 0.00 42.97 4.24
1437 1533 2.783275 CAGACACATGCTCGCAGC 59.217 61.111 0.00 1.70 42.82 5.25
1438 1534 2.783275 GCAGACACATGCTCGCAG 59.217 61.111 0.00 0.00 43.07 5.18
1498 1594 4.378616 CCGCAAAGTGATCAAAACTTTACG 59.621 41.667 16.98 16.98 46.56 3.18
1581 1679 0.109132 CAACAGGCCTTTTCGATGCC 60.109 55.000 0.00 7.48 45.70 4.40
1590 1688 4.082125 CAAGTAGAATTCCAACAGGCCTT 58.918 43.478 0.00 0.00 0.00 4.35
1655 1753 2.642311 TCTGATTTGCTACCCAACAGGA 59.358 45.455 0.00 0.00 39.89 3.86
1656 1754 3.071874 TCTGATTTGCTACCCAACAGG 57.928 47.619 0.00 0.00 43.78 4.00
1657 1755 3.629398 GGATCTGATTTGCTACCCAACAG 59.371 47.826 0.00 0.00 31.97 3.16
1658 1756 3.010027 TGGATCTGATTTGCTACCCAACA 59.990 43.478 0.00 0.00 31.97 3.33
1659 1757 3.620488 TGGATCTGATTTGCTACCCAAC 58.380 45.455 0.00 0.00 31.97 3.77
1660 1758 4.524802 ATGGATCTGATTTGCTACCCAA 57.475 40.909 0.00 0.00 0.00 4.12
1668 1772 6.668541 AGTTTCACGTATGGATCTGATTTG 57.331 37.500 0.00 0.00 0.00 2.32
1724 1828 0.179248 GCTGCGCTTTACTGTCGTTC 60.179 55.000 9.73 0.00 0.00 3.95
1728 1832 1.734465 AGATTGCTGCGCTTTACTGTC 59.266 47.619 9.73 0.00 0.00 3.51
1762 1866 9.858247 CTTCACAACAAATTTGAAATCTTCATG 57.142 29.630 24.64 8.52 39.84 3.07
1909 2015 5.295787 TGCTCACAAATGTTAGAGACGTTTT 59.704 36.000 5.38 0.00 43.26 2.43
1917 2023 3.327757 ACCCTCTGCTCACAAATGTTAGA 59.672 43.478 0.00 0.00 0.00 2.10
1918 2024 3.438087 CACCCTCTGCTCACAAATGTTAG 59.562 47.826 0.00 0.00 0.00 2.34
1919 2025 3.181445 ACACCCTCTGCTCACAAATGTTA 60.181 43.478 0.00 0.00 0.00 2.41
1920 2026 2.233271 CACCCTCTGCTCACAAATGTT 58.767 47.619 0.00 0.00 0.00 2.71
1932 2038 1.209019 AGCTGCAGATTACACCCTCTG 59.791 52.381 20.43 0.00 41.47 3.35
1945 2051 5.174761 CGAAGAAATACTAGCTTAGCTGCAG 59.825 44.000 17.97 10.11 40.10 4.41
1977 2083 2.811431 TCTTCGCATGTTTACCAACCTG 59.189 45.455 0.00 0.00 33.02 4.00
1993 2099 1.019673 CCTGTTCATGCCCATCTTCG 58.980 55.000 0.00 0.00 0.00 3.79
2054 2160 7.016268 TCCATGGTCTTGAGTAAGTTAAGAGTT 59.984 37.037 12.58 0.00 35.38 3.01
2069 2175 3.198409 TCATTCGGATCCATGGTCTTG 57.802 47.619 12.58 6.28 0.00 3.02
2084 2190 9.430838 CGAGATTTCTCATTTTGTACATCATTC 57.569 33.333 8.23 0.00 43.00 2.67
2361 2563 2.092914 GGTGCAAGTGCCTAATACTCCT 60.093 50.000 0.00 0.00 41.18 3.69
2363 2565 3.268023 AGGTGCAAGTGCCTAATACTC 57.732 47.619 0.00 0.00 41.18 2.59
2364 2566 3.432326 GCTAGGTGCAAGTGCCTAATACT 60.432 47.826 0.00 0.00 42.31 2.12
2389 2591 9.558396 AAAAACATCATAACCATTGTCACAAAT 57.442 25.926 0.00 0.00 0.00 2.32
2395 2597 9.079833 CATCAGAAAAACATCATAACCATTGTC 57.920 33.333 0.00 0.00 0.00 3.18
2417 2621 2.689553 TCGAGTGCCATAAAGCATCA 57.310 45.000 0.00 0.00 46.24 3.07
2418 2622 4.558538 AAATCGAGTGCCATAAAGCATC 57.441 40.909 0.00 0.00 46.24 3.91
2489 2695 2.111756 GCAAGCAAACTCAAACTCGTG 58.888 47.619 0.00 0.00 0.00 4.35
2491 2697 1.003972 TCGCAAGCAAACTCAAACTCG 60.004 47.619 0.00 0.00 37.18 4.18
2545 2751 2.200373 TTCCAGCTTTGCTTAGGACC 57.800 50.000 0.00 0.00 36.40 4.46
2586 2792 9.314321 CATTTCTTGTAGAATATCGTACCTTGT 57.686 33.333 0.00 0.00 33.67 3.16
2845 3067 9.450807 CCTGTAACAACATAATATAAGCAAAGC 57.549 33.333 0.00 0.00 0.00 3.51
2954 3181 6.322201 ACTCGATTTGAATCTGCCCATATTTT 59.678 34.615 2.58 0.00 33.24 1.82
3025 3252 0.032678 CGAACCCTCATGCGCTAGAT 59.967 55.000 9.73 0.00 0.00 1.98
3029 3256 2.434884 CACGAACCCTCATGCGCT 60.435 61.111 9.73 0.00 0.00 5.92
3069 3306 7.934855 AATCTCAAAGCAGAGTTCATTACAT 57.065 32.000 0.00 0.00 36.97 2.29
3096 3388 8.385898 TCACGAAACCTTTGAGTAATTAACAT 57.614 30.769 0.00 0.00 0.00 2.71
3112 3404 3.060070 CCTACGTTTGTTCTCACGAAACC 60.060 47.826 0.00 0.00 39.76 3.27
3126 3418 3.011119 TGTTGACAACAAGCCTACGTTT 58.989 40.909 18.56 0.00 38.72 3.60
3152 3444 9.927668 CACCACAAAGAAGTTATAATTCCATTT 57.072 29.630 0.00 0.00 0.00 2.32
3153 3445 9.308000 TCACCACAAAGAAGTTATAATTCCATT 57.692 29.630 0.00 0.00 0.00 3.16
3154 3446 8.877864 TCACCACAAAGAAGTTATAATTCCAT 57.122 30.769 0.00 0.00 0.00 3.41
3155 3447 8.877864 ATCACCACAAAGAAGTTATAATTCCA 57.122 30.769 0.00 0.00 0.00 3.53
3158 3450 9.408648 CCCTATCACCACAAAGAAGTTATAATT 57.591 33.333 0.00 0.00 0.00 1.40
3199 3491 7.383300 TCAATCTGTTCAGACGATAAGCATATG 59.617 37.037 4.58 0.00 0.00 1.78
3203 3495 5.072040 TCAATCTGTTCAGACGATAAGCA 57.928 39.130 4.58 0.00 0.00 3.91
3276 3569 1.580815 GGTTGTTTTGTGCCATGGTG 58.419 50.000 14.67 0.00 0.00 4.17
3298 3591 8.687824 AATTTACACAAGTTGCACATAATAGC 57.312 30.769 1.81 0.00 0.00 2.97
3301 3594 8.772705 CCAAAATTTACACAAGTTGCACATAAT 58.227 29.630 1.81 0.00 0.00 1.28
3302 3595 7.766278 ACCAAAATTTACACAAGTTGCACATAA 59.234 29.630 1.81 0.00 0.00 1.90
3303 3596 7.268586 ACCAAAATTTACACAAGTTGCACATA 58.731 30.769 1.81 0.00 0.00 2.29
3304 3597 6.112058 ACCAAAATTTACACAAGTTGCACAT 58.888 32.000 1.81 0.00 0.00 3.21
3305 3598 5.482908 ACCAAAATTTACACAAGTTGCACA 58.517 33.333 1.81 0.00 0.00 4.57
3314 3607 6.631016 TGTTTGCACTACCAAAATTTACACA 58.369 32.000 0.00 0.00 36.55 3.72
3317 3610 6.210396 GCTGTTTGCACTACCAAAATTTAC 57.790 37.500 0.00 0.00 42.31 2.01
3348 3641 6.005066 TCTATGCATTCTGGAGAATTTGGA 57.995 37.500 3.54 0.00 42.41 3.53
3362 3655 4.408270 TCTCTCTCAGGCTTTCTATGCATT 59.592 41.667 3.54 0.00 0.00 3.56
3370 3667 1.209261 CCCCTTCTCTCTCAGGCTTTC 59.791 57.143 0.00 0.00 0.00 2.62
3419 3717 4.383010 GGGTTGGCTTTCCATTTATTCCTG 60.383 45.833 0.00 0.00 43.05 3.86
3420 3718 3.774766 GGGTTGGCTTTCCATTTATTCCT 59.225 43.478 0.00 0.00 43.05 3.36
3422 3720 3.517500 TGGGGTTGGCTTTCCATTTATTC 59.482 43.478 0.00 0.00 43.05 1.75
3424 3722 3.106827 CTGGGGTTGGCTTTCCATTTAT 58.893 45.455 0.00 0.00 43.05 1.40
3425 3723 2.110899 TCTGGGGTTGGCTTTCCATTTA 59.889 45.455 0.00 0.00 43.05 1.40
3460 3758 0.808125 TGCGGTTTTTGATCATCCGG 59.192 50.000 21.50 0.00 41.24 5.14
3461 3759 1.795162 GCTGCGGTTTTTGATCATCCG 60.795 52.381 18.25 18.25 43.37 4.18
3463 3761 2.421424 AGAGCTGCGGTTTTTGATCATC 59.579 45.455 0.00 0.00 0.00 2.92
3464 3762 2.440409 AGAGCTGCGGTTTTTGATCAT 58.560 42.857 0.00 0.00 0.00 2.45
3465 3763 1.896220 AGAGCTGCGGTTTTTGATCA 58.104 45.000 0.00 0.00 0.00 2.92
3466 3764 2.226437 TGAAGAGCTGCGGTTTTTGATC 59.774 45.455 0.00 0.00 0.00 2.92
3467 3765 2.229792 TGAAGAGCTGCGGTTTTTGAT 58.770 42.857 0.00 0.00 0.00 2.57
3519 3817 4.520492 TCTTTCTTTTTGCCTGGCTTCTAG 59.480 41.667 21.03 11.94 0.00 2.43
3857 4158 0.764890 TGAACAACCTCCAGACAGGG 59.235 55.000 0.00 0.00 37.96 4.45
3918 4219 1.212229 GGGTGGACGACGAGAAGAC 59.788 63.158 0.00 0.00 0.00 3.01
4145 4446 3.169512 GGGATCAAAACCCTCCTTTCA 57.830 47.619 0.00 0.00 43.65 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.