Multiple sequence alignment - TraesCS5D01G333500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G333500 chr5D 100.000 3011 0 0 1 3011 423513928 423510918 0.000000e+00 5561.0
1 TraesCS5D01G333500 chr5D 84.258 991 136 17 1047 2024 423756765 423757748 0.000000e+00 948.0
2 TraesCS5D01G333500 chr5D 98.611 288 3 1 1 287 423526955 423526668 2.680000e-140 508.0
3 TraesCS5D01G333500 chr5D 95.833 288 10 2 1 287 132819607 132819321 5.880000e-127 464.0
4 TraesCS5D01G333500 chr5B 91.057 1845 89 46 617 2418 511362472 511360661 0.000000e+00 2423.0
5 TraesCS5D01G333500 chr5B 84.940 996 130 17 1047 2029 511602151 511603139 0.000000e+00 990.0
6 TraesCS5D01G333500 chr5B 89.027 483 39 7 2426 2895 511360524 511360043 1.200000e-163 586.0
7 TraesCS5D01G333500 chr5B 86.154 130 10 3 2890 3011 511359993 511359864 1.880000e-27 134.0
8 TraesCS5D01G333500 chr5A 90.128 1489 95 33 617 2068 537118657 537117184 0.000000e+00 1888.0
9 TraesCS5D01G333500 chr5A 85.282 992 135 10 1047 2029 537249038 537250027 0.000000e+00 1013.0
10 TraesCS5D01G333500 chr5A 88.110 471 33 9 2431 2889 537113802 537113343 3.420000e-149 538.0
11 TraesCS5D01G333500 chr5A 81.044 364 31 16 2073 2423 537114303 537113965 3.850000e-64 255.0
12 TraesCS5D01G333500 chr5A 89.313 131 5 3 2888 3011 537113287 537113159 4.020000e-34 156.0
13 TraesCS5D01G333500 chr1D 95.848 289 10 2 1 287 425147851 425147563 1.630000e-127 466.0
14 TraesCS5D01G333500 chr1D 79.522 293 43 13 292 571 483981050 483981338 3.060000e-45 193.0
15 TraesCS5D01G333500 chr4D 96.140 285 10 1 1 284 33893140 33893424 5.880000e-127 464.0
16 TraesCS5D01G333500 chr7D 95.804 286 10 2 1 284 431743998 431744283 7.610000e-126 460.0
17 TraesCS5D01G333500 chr7D 83.505 291 36 4 292 572 627798953 627798665 8.280000e-66 261.0
18 TraesCS5D01G333500 chr7D 77.401 177 29 5 404 571 27288187 27288013 8.890000e-16 95.3
19 TraesCS5D01G333500 chr6D 95.486 288 11 2 1 287 185176781 185176495 2.740000e-125 459.0
20 TraesCS5D01G333500 chr6D 84.375 224 31 4 292 512 435078029 435078251 1.820000e-52 217.0
21 TraesCS5D01G333500 chr3D 95.502 289 10 3 1 287 588462133 588461846 2.740000e-125 459.0
22 TraesCS5D01G333500 chr3D 92.857 308 19 3 1 306 283583186 283582880 7.660000e-121 444.0
23 TraesCS5D01G333500 chr3D 85.121 289 32 5 292 569 441582833 441583121 4.910000e-73 285.0
24 TraesCS5D01G333500 chr3D 85.909 220 29 2 292 510 308746750 308746532 1.800000e-57 233.0
25 TraesCS5D01G333500 chr3D 85.398 226 28 5 288 510 113353823 113354046 2.330000e-56 230.0
26 TraesCS5D01G333500 chr3D 79.167 288 48 6 296 571 556064198 556064485 3.960000e-44 189.0
27 TraesCS5D01G333500 chr2D 95.172 290 11 3 1 287 198066617 198066328 3.540000e-124 455.0
28 TraesCS5D01G333500 chr2D 86.161 224 29 2 288 509 606916198 606915975 1.080000e-59 241.0
29 TraesCS5D01G333500 chr2B 84.229 279 29 7 305 572 548938229 548938503 1.070000e-64 257.0
30 TraesCS5D01G333500 chr2B 75.524 286 44 19 305 571 92139212 92139490 1.900000e-22 117.0
31 TraesCS5D01G333500 chr7A 82.026 306 40 12 288 581 438524407 438524105 2.320000e-61 246.0
32 TraesCS5D01G333500 chr2A 82.131 291 40 9 292 572 622165853 622165565 3.880000e-59 239.0
33 TraesCS5D01G333500 chr2A 74.157 178 36 5 404 572 49758435 49758611 6.970000e-07 65.8
34 TraesCS5D01G333500 chr2A 100.000 30 0 0 1223 1252 49068506 49068477 4.190000e-04 56.5
35 TraesCS5D01G333500 chr7B 75.570 307 41 18 305 585 605153296 605153594 1.470000e-23 121.0
36 TraesCS5D01G333500 chr6A 75.083 301 52 15 288 571 278305075 278305369 5.270000e-23 119.0
37 TraesCS5D01G333500 chr4A 86.885 61 4 3 513 572 196553408 196553351 6.970000e-07 65.8
38 TraesCS5D01G333500 chr1A 89.091 55 0 5 523 575 300081225 300081175 2.510000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G333500 chr5D 423510918 423513928 3010 True 5561.000000 5561 100.00000 1 3011 1 chr5D.!!$R2 3010
1 TraesCS5D01G333500 chr5D 423756765 423757748 983 False 948.000000 948 84.25800 1047 2024 1 chr5D.!!$F1 977
2 TraesCS5D01G333500 chr5B 511359864 511362472 2608 True 1047.666667 2423 88.74600 617 3011 3 chr5B.!!$R1 2394
3 TraesCS5D01G333500 chr5B 511602151 511603139 988 False 990.000000 990 84.94000 1047 2029 1 chr5B.!!$F1 982
4 TraesCS5D01G333500 chr5A 537249038 537250027 989 False 1013.000000 1013 85.28200 1047 2029 1 chr5A.!!$F1 982
5 TraesCS5D01G333500 chr5A 537113159 537118657 5498 True 709.250000 1888 87.14875 617 3011 4 chr5A.!!$R1 2394

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 394 0.030101 CACTCCTTTTCGCGCCAAAA 59.97 50.0 12.36 12.36 0.0 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2166 5124 0.554305 AAATAATCCCCACCCGGACC 59.446 55.0 0.73 0.0 33.77 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.594881 TCTATTTGAAGACTTTGAGTGAAGAC 57.405 34.615 0.00 0.00 0.00 3.01
30 31 8.424918 TCTATTTGAAGACTTTGAGTGAAGACT 58.575 33.333 0.00 0.00 34.04 3.24
31 32 7.872113 ATTTGAAGACTTTGAGTGAAGACTT 57.128 32.000 2.86 2.86 41.80 3.01
32 33 7.687941 TTTGAAGACTTTGAGTGAAGACTTT 57.312 32.000 4.42 0.00 40.14 2.66
33 34 6.910536 TGAAGACTTTGAGTGAAGACTTTC 57.089 37.500 4.42 0.00 40.14 2.62
34 35 6.644347 TGAAGACTTTGAGTGAAGACTTTCT 58.356 36.000 4.42 0.00 40.14 2.52
35 36 6.758886 TGAAGACTTTGAGTGAAGACTTTCTC 59.241 38.462 11.81 11.81 40.14 2.87
36 37 6.227298 AGACTTTGAGTGAAGACTTTCTCA 57.773 37.500 15.37 15.37 35.54 3.27
37 38 6.644347 AGACTTTGAGTGAAGACTTTCTCAA 58.356 36.000 21.81 21.81 42.57 3.02
38 39 7.278875 AGACTTTGAGTGAAGACTTTCTCAAT 58.721 34.615 24.12 16.50 43.32 2.57
39 40 7.772757 AGACTTTGAGTGAAGACTTTCTCAATT 59.227 33.333 24.12 18.28 43.32 2.32
40 41 8.286191 ACTTTGAGTGAAGACTTTCTCAATTT 57.714 30.769 24.12 16.59 43.32 1.82
41 42 8.401709 ACTTTGAGTGAAGACTTTCTCAATTTC 58.598 33.333 24.12 6.77 43.32 2.17
42 43 6.867662 TGAGTGAAGACTTTCTCAATTTCC 57.132 37.500 16.38 0.00 34.61 3.13
43 44 6.595682 TGAGTGAAGACTTTCTCAATTTCCT 58.404 36.000 16.38 0.00 34.61 3.36
44 45 6.708054 TGAGTGAAGACTTTCTCAATTTCCTC 59.292 38.462 16.38 3.69 34.61 3.71
45 46 6.595682 AGTGAAGACTTTCTCAATTTCCTCA 58.404 36.000 0.00 0.00 34.31 3.86
46 47 6.709846 AGTGAAGACTTTCTCAATTTCCTCAG 59.290 38.462 0.00 0.00 34.31 3.35
47 48 6.484977 GTGAAGACTTTCTCAATTTCCTCAGT 59.515 38.462 0.00 0.00 34.31 3.41
48 49 7.012799 GTGAAGACTTTCTCAATTTCCTCAGTT 59.987 37.037 0.00 0.00 34.31 3.16
49 50 7.227512 TGAAGACTTTCTCAATTTCCTCAGTTC 59.772 37.037 0.00 0.00 34.31 3.01
50 51 6.595682 AGACTTTCTCAATTTCCTCAGTTCA 58.404 36.000 0.00 0.00 0.00 3.18
51 52 7.056635 AGACTTTCTCAATTTCCTCAGTTCAA 58.943 34.615 0.00 0.00 0.00 2.69
52 53 7.723172 AGACTTTCTCAATTTCCTCAGTTCAAT 59.277 33.333 0.00 0.00 0.00 2.57
53 54 8.242729 ACTTTCTCAATTTCCTCAGTTCAATT 57.757 30.769 0.00 0.00 0.00 2.32
54 55 8.699130 ACTTTCTCAATTTCCTCAGTTCAATTT 58.301 29.630 0.00 0.00 0.00 1.82
55 56 9.189723 CTTTCTCAATTTCCTCAGTTCAATTTC 57.810 33.333 0.00 0.00 0.00 2.17
56 57 8.469309 TTCTCAATTTCCTCAGTTCAATTTCT 57.531 30.769 0.00 0.00 0.00 2.52
57 58 8.469309 TCTCAATTTCCTCAGTTCAATTTCTT 57.531 30.769 0.00 0.00 0.00 2.52
58 59 8.571336 TCTCAATTTCCTCAGTTCAATTTCTTC 58.429 33.333 0.00 0.00 0.00 2.87
59 60 8.236585 TCAATTTCCTCAGTTCAATTTCTTCA 57.763 30.769 0.00 0.00 0.00 3.02
60 61 8.355169 TCAATTTCCTCAGTTCAATTTCTTCAG 58.645 33.333 0.00 0.00 0.00 3.02
61 62 7.830099 ATTTCCTCAGTTCAATTTCTTCAGT 57.170 32.000 0.00 0.00 0.00 3.41
62 63 6.867662 TTCCTCAGTTCAATTTCTTCAGTC 57.132 37.500 0.00 0.00 0.00 3.51
63 64 6.179906 TCCTCAGTTCAATTTCTTCAGTCT 57.820 37.500 0.00 0.00 0.00 3.24
64 65 5.994054 TCCTCAGTTCAATTTCTTCAGTCTG 59.006 40.000 0.00 0.00 0.00 3.51
65 66 5.762218 CCTCAGTTCAATTTCTTCAGTCTGT 59.238 40.000 0.00 0.00 0.00 3.41
66 67 6.261826 CCTCAGTTCAATTTCTTCAGTCTGTT 59.738 38.462 0.00 0.00 0.00 3.16
67 68 7.201767 CCTCAGTTCAATTTCTTCAGTCTGTTT 60.202 37.037 0.00 0.00 0.00 2.83
68 69 7.475015 TCAGTTCAATTTCTTCAGTCTGTTTG 58.525 34.615 0.00 0.00 0.00 2.93
69 70 7.121168 TCAGTTCAATTTCTTCAGTCTGTTTGT 59.879 33.333 0.00 0.00 0.00 2.83
70 71 7.430502 CAGTTCAATTTCTTCAGTCTGTTTGTC 59.569 37.037 0.00 0.00 0.00 3.18
71 72 7.337942 AGTTCAATTTCTTCAGTCTGTTTGTCT 59.662 33.333 0.00 0.00 0.00 3.41
72 73 7.630242 TCAATTTCTTCAGTCTGTTTGTCTT 57.370 32.000 0.00 0.00 0.00 3.01
73 74 7.697691 TCAATTTCTTCAGTCTGTTTGTCTTC 58.302 34.615 0.00 0.00 0.00 2.87
74 75 7.554118 TCAATTTCTTCAGTCTGTTTGTCTTCT 59.446 33.333 0.00 0.00 0.00 2.85
75 76 7.872113 ATTTCTTCAGTCTGTTTGTCTTCTT 57.128 32.000 0.00 0.00 0.00 2.52
76 77 6.910536 TTCTTCAGTCTGTTTGTCTTCTTC 57.089 37.500 0.00 0.00 0.00 2.87
77 78 5.360591 TCTTCAGTCTGTTTGTCTTCTTCC 58.639 41.667 0.00 0.00 0.00 3.46
78 79 5.129485 TCTTCAGTCTGTTTGTCTTCTTCCT 59.871 40.000 0.00 0.00 0.00 3.36
79 80 4.697514 TCAGTCTGTTTGTCTTCTTCCTG 58.302 43.478 0.00 0.00 0.00 3.86
80 81 4.162320 TCAGTCTGTTTGTCTTCTTCCTGT 59.838 41.667 0.00 0.00 0.00 4.00
81 82 4.878397 CAGTCTGTTTGTCTTCTTCCTGTT 59.122 41.667 0.00 0.00 0.00 3.16
82 83 5.355350 CAGTCTGTTTGTCTTCTTCCTGTTT 59.645 40.000 0.00 0.00 0.00 2.83
83 84 6.538742 CAGTCTGTTTGTCTTCTTCCTGTTTA 59.461 38.462 0.00 0.00 0.00 2.01
84 85 7.227512 CAGTCTGTTTGTCTTCTTCCTGTTTAT 59.772 37.037 0.00 0.00 0.00 1.40
85 86 7.442666 AGTCTGTTTGTCTTCTTCCTGTTTATC 59.557 37.037 0.00 0.00 0.00 1.75
86 87 6.710744 TCTGTTTGTCTTCTTCCTGTTTATCC 59.289 38.462 0.00 0.00 0.00 2.59
87 88 6.601332 TGTTTGTCTTCTTCCTGTTTATCCT 58.399 36.000 0.00 0.00 0.00 3.24
88 89 6.486657 TGTTTGTCTTCTTCCTGTTTATCCTG 59.513 38.462 0.00 0.00 0.00 3.86
89 90 5.825593 TGTCTTCTTCCTGTTTATCCTGT 57.174 39.130 0.00 0.00 0.00 4.00
90 91 5.551233 TGTCTTCTTCCTGTTTATCCTGTG 58.449 41.667 0.00 0.00 0.00 3.66
91 92 5.071788 TGTCTTCTTCCTGTTTATCCTGTGT 59.928 40.000 0.00 0.00 0.00 3.72
92 93 5.998363 GTCTTCTTCCTGTTTATCCTGTGTT 59.002 40.000 0.00 0.00 0.00 3.32
93 94 6.486993 GTCTTCTTCCTGTTTATCCTGTGTTT 59.513 38.462 0.00 0.00 0.00 2.83
94 95 7.660208 GTCTTCTTCCTGTTTATCCTGTGTTTA 59.340 37.037 0.00 0.00 0.00 2.01
95 96 7.660208 TCTTCTTCCTGTTTATCCTGTGTTTAC 59.340 37.037 0.00 0.00 0.00 2.01
96 97 5.929992 TCTTCCTGTTTATCCTGTGTTTACG 59.070 40.000 0.00 0.00 0.00 3.18
97 98 3.998341 TCCTGTTTATCCTGTGTTTACGC 59.002 43.478 0.00 0.00 0.00 4.42
98 99 4.000988 CCTGTTTATCCTGTGTTTACGCT 58.999 43.478 0.00 0.00 0.00 5.07
99 100 4.454504 CCTGTTTATCCTGTGTTTACGCTT 59.545 41.667 0.00 0.00 0.00 4.68
100 101 5.048991 CCTGTTTATCCTGTGTTTACGCTTT 60.049 40.000 0.00 0.00 0.00 3.51
101 102 5.992729 TGTTTATCCTGTGTTTACGCTTTC 58.007 37.500 0.00 0.00 0.00 2.62
102 103 5.761234 TGTTTATCCTGTGTTTACGCTTTCT 59.239 36.000 0.00 0.00 0.00 2.52
103 104 5.856126 TTATCCTGTGTTTACGCTTTCTG 57.144 39.130 0.00 0.00 0.00 3.02
104 105 3.188159 TCCTGTGTTTACGCTTTCTGT 57.812 42.857 0.00 0.00 0.00 3.41
105 106 4.325028 TCCTGTGTTTACGCTTTCTGTA 57.675 40.909 0.00 0.00 0.00 2.74
106 107 4.053295 TCCTGTGTTTACGCTTTCTGTAC 58.947 43.478 0.00 0.00 0.00 2.90
107 108 4.056050 CCTGTGTTTACGCTTTCTGTACT 58.944 43.478 0.00 0.00 0.00 2.73
108 109 4.150098 CCTGTGTTTACGCTTTCTGTACTC 59.850 45.833 0.00 0.00 0.00 2.59
109 110 4.053295 TGTGTTTACGCTTTCTGTACTCC 58.947 43.478 0.00 0.00 0.00 3.85
110 111 3.120782 GTGTTTACGCTTTCTGTACTCCG 59.879 47.826 0.00 0.00 0.00 4.63
111 112 3.243501 TGTTTACGCTTTCTGTACTCCGT 60.244 43.478 0.00 0.00 0.00 4.69
112 113 2.624316 TACGCTTTCTGTACTCCGTG 57.376 50.000 0.00 0.00 0.00 4.94
113 114 0.666577 ACGCTTTCTGTACTCCGTGC 60.667 55.000 0.00 0.00 0.00 5.34
114 115 0.388649 CGCTTTCTGTACTCCGTGCT 60.389 55.000 0.00 0.00 0.00 4.40
115 116 1.797025 GCTTTCTGTACTCCGTGCTT 58.203 50.000 0.00 0.00 0.00 3.91
116 117 1.461127 GCTTTCTGTACTCCGTGCTTG 59.539 52.381 0.00 0.00 0.00 4.01
117 118 2.755650 CTTTCTGTACTCCGTGCTTGT 58.244 47.619 0.00 0.00 0.00 3.16
118 119 2.902705 TTCTGTACTCCGTGCTTGTT 57.097 45.000 0.00 0.00 0.00 2.83
119 120 2.902705 TCTGTACTCCGTGCTTGTTT 57.097 45.000 0.00 0.00 0.00 2.83
120 121 3.188159 TCTGTACTCCGTGCTTGTTTT 57.812 42.857 0.00 0.00 0.00 2.43
121 122 3.128349 TCTGTACTCCGTGCTTGTTTTC 58.872 45.455 0.00 0.00 0.00 2.29
122 123 2.869801 CTGTACTCCGTGCTTGTTTTCA 59.130 45.455 0.00 0.00 0.00 2.69
123 124 3.472652 TGTACTCCGTGCTTGTTTTCAT 58.527 40.909 0.00 0.00 0.00 2.57
124 125 3.880490 TGTACTCCGTGCTTGTTTTCATT 59.120 39.130 0.00 0.00 0.00 2.57
125 126 4.336993 TGTACTCCGTGCTTGTTTTCATTT 59.663 37.500 0.00 0.00 0.00 2.32
126 127 3.964909 ACTCCGTGCTTGTTTTCATTTC 58.035 40.909 0.00 0.00 0.00 2.17
127 128 3.380004 ACTCCGTGCTTGTTTTCATTTCA 59.620 39.130 0.00 0.00 0.00 2.69
128 129 4.037923 ACTCCGTGCTTGTTTTCATTTCAT 59.962 37.500 0.00 0.00 0.00 2.57
129 130 4.545610 TCCGTGCTTGTTTTCATTTCATC 58.454 39.130 0.00 0.00 0.00 2.92
130 131 4.037327 TCCGTGCTTGTTTTCATTTCATCA 59.963 37.500 0.00 0.00 0.00 3.07
131 132 4.925054 CCGTGCTTGTTTTCATTTCATCAT 59.075 37.500 0.00 0.00 0.00 2.45
132 133 5.164031 CCGTGCTTGTTTTCATTTCATCATG 60.164 40.000 0.00 0.00 0.00 3.07
133 134 5.630264 CGTGCTTGTTTTCATTTCATCATGA 59.370 36.000 0.00 0.00 0.00 3.07
134 135 6.309494 CGTGCTTGTTTTCATTTCATCATGAT 59.691 34.615 1.18 1.18 33.07 2.45
135 136 7.453034 GTGCTTGTTTTCATTTCATCATGATG 58.547 34.615 26.79 26.79 40.09 3.07
136 137 7.329962 GTGCTTGTTTTCATTTCATCATGATGA 59.670 33.333 30.27 30.27 45.30 2.92
137 138 7.329962 TGCTTGTTTTCATTTCATCATGATGAC 59.670 33.333 33.02 21.16 46.49 3.06
138 139 7.201496 GCTTGTTTTCATTTCATCATGATGACC 60.201 37.037 33.02 15.70 46.49 4.02
139 140 7.229581 TGTTTTCATTTCATCATGATGACCA 57.770 32.000 33.02 23.86 46.49 4.02
140 141 7.842982 TGTTTTCATTTCATCATGATGACCAT 58.157 30.769 33.02 24.82 46.49 3.55
152 153 5.758924 CATGATGACCATGCTTATGTTCTG 58.241 41.667 0.00 0.00 45.25 3.02
153 154 4.847198 TGATGACCATGCTTATGTTCTGT 58.153 39.130 0.00 0.00 0.00 3.41
154 155 5.255687 TGATGACCATGCTTATGTTCTGTT 58.744 37.500 0.00 0.00 0.00 3.16
155 156 6.413892 TGATGACCATGCTTATGTTCTGTTA 58.586 36.000 0.00 0.00 0.00 2.41
156 157 7.056006 TGATGACCATGCTTATGTTCTGTTAT 58.944 34.615 0.00 0.00 0.00 1.89
157 158 6.682423 TGACCATGCTTATGTTCTGTTATG 57.318 37.500 0.00 0.00 0.00 1.90
158 159 6.179756 TGACCATGCTTATGTTCTGTTATGT 58.820 36.000 0.00 0.00 0.00 2.29
159 160 6.658816 TGACCATGCTTATGTTCTGTTATGTT 59.341 34.615 0.00 0.00 0.00 2.71
160 161 7.176515 TGACCATGCTTATGTTCTGTTATGTTT 59.823 33.333 0.00 0.00 0.00 2.83
161 162 7.315142 ACCATGCTTATGTTCTGTTATGTTTG 58.685 34.615 0.00 0.00 0.00 2.93
162 163 6.254157 CCATGCTTATGTTCTGTTATGTTTGC 59.746 38.462 0.00 0.00 0.00 3.68
163 164 6.324561 TGCTTATGTTCTGTTATGTTTGCA 57.675 33.333 0.00 0.00 0.00 4.08
164 165 6.923012 TGCTTATGTTCTGTTATGTTTGCAT 58.077 32.000 0.00 0.00 39.03 3.96
165 166 7.028962 TGCTTATGTTCTGTTATGTTTGCATC 58.971 34.615 0.00 0.00 36.58 3.91
166 167 7.094248 TGCTTATGTTCTGTTATGTTTGCATCT 60.094 33.333 0.00 0.00 36.58 2.90
167 168 7.219535 GCTTATGTTCTGTTATGTTTGCATCTG 59.780 37.037 0.00 0.00 36.58 2.90
168 169 6.822667 ATGTTCTGTTATGTTTGCATCTGA 57.177 33.333 0.00 0.00 36.58 3.27
169 170 6.245115 TGTTCTGTTATGTTTGCATCTGAG 57.755 37.500 0.00 0.00 36.58 3.35
170 171 5.764686 TGTTCTGTTATGTTTGCATCTGAGT 59.235 36.000 0.00 0.00 36.58 3.41
171 172 6.934083 TGTTCTGTTATGTTTGCATCTGAGTA 59.066 34.615 0.00 0.00 36.58 2.59
172 173 6.968131 TCTGTTATGTTTGCATCTGAGTAC 57.032 37.500 0.00 0.00 36.58 2.73
173 174 6.701340 TCTGTTATGTTTGCATCTGAGTACT 58.299 36.000 0.00 0.00 36.58 2.73
174 175 7.161404 TCTGTTATGTTTGCATCTGAGTACTT 58.839 34.615 0.00 0.00 36.58 2.24
175 176 8.311109 TCTGTTATGTTTGCATCTGAGTACTTA 58.689 33.333 0.00 0.00 36.58 2.24
176 177 9.102757 CTGTTATGTTTGCATCTGAGTACTTAT 57.897 33.333 0.00 0.00 36.58 1.73
177 178 9.448438 TGTTATGTTTGCATCTGAGTACTTATT 57.552 29.630 0.00 0.00 36.58 1.40
178 179 9.922305 GTTATGTTTGCATCTGAGTACTTATTC 57.078 33.333 0.00 0.00 36.58 1.75
179 180 6.985188 TGTTTGCATCTGAGTACTTATTCC 57.015 37.500 0.00 0.00 0.00 3.01
180 181 5.580691 TGTTTGCATCTGAGTACTTATTCCG 59.419 40.000 0.00 0.00 0.00 4.30
181 182 3.717707 TGCATCTGAGTACTTATTCCGC 58.282 45.455 0.00 0.00 0.00 5.54
182 183 3.384789 TGCATCTGAGTACTTATTCCGCT 59.615 43.478 0.00 0.00 0.00 5.52
183 184 3.738282 GCATCTGAGTACTTATTCCGCTG 59.262 47.826 0.00 0.00 0.00 5.18
184 185 3.438297 TCTGAGTACTTATTCCGCTGC 57.562 47.619 0.00 0.00 0.00 5.25
185 186 2.758423 TCTGAGTACTTATTCCGCTGCA 59.242 45.455 0.00 0.00 0.00 4.41
186 187 3.194755 TCTGAGTACTTATTCCGCTGCAA 59.805 43.478 0.00 0.00 0.00 4.08
187 188 3.521560 TGAGTACTTATTCCGCTGCAAG 58.478 45.455 0.00 0.00 0.00 4.01
188 189 3.056107 TGAGTACTTATTCCGCTGCAAGT 60.056 43.478 0.00 4.02 35.30 3.16
189 190 4.158949 TGAGTACTTATTCCGCTGCAAGTA 59.841 41.667 0.00 3.00 35.30 2.24
190 191 4.683832 AGTACTTATTCCGCTGCAAGTAG 58.316 43.478 9.07 0.00 34.93 2.57
191 192 3.611766 ACTTATTCCGCTGCAAGTAGT 57.388 42.857 0.00 0.00 35.30 2.73
192 193 3.939066 ACTTATTCCGCTGCAAGTAGTT 58.061 40.909 0.00 0.00 35.30 2.24
193 194 3.933332 ACTTATTCCGCTGCAAGTAGTTC 59.067 43.478 0.00 0.00 35.30 3.01
194 195 2.770164 ATTCCGCTGCAAGTAGTTCT 57.230 45.000 0.00 0.00 35.30 3.01
195 196 2.543777 TTCCGCTGCAAGTAGTTCTT 57.456 45.000 0.00 0.00 35.30 2.52
196 197 2.080286 TCCGCTGCAAGTAGTTCTTC 57.920 50.000 0.00 0.00 35.30 2.87
197 198 0.716108 CCGCTGCAAGTAGTTCTTCG 59.284 55.000 0.00 0.00 35.30 3.79
198 199 0.093705 CGCTGCAAGTAGTTCTTCGC 59.906 55.000 0.00 0.00 35.30 4.70
199 200 1.433534 GCTGCAAGTAGTTCTTCGCT 58.566 50.000 0.00 0.00 35.30 4.93
200 201 2.607187 GCTGCAAGTAGTTCTTCGCTA 58.393 47.619 0.00 0.00 35.30 4.26
201 202 2.993899 GCTGCAAGTAGTTCTTCGCTAA 59.006 45.455 0.00 0.00 35.30 3.09
202 203 3.061429 GCTGCAAGTAGTTCTTCGCTAAG 59.939 47.826 0.00 0.00 35.30 2.18
203 204 3.585862 TGCAAGTAGTTCTTCGCTAAGG 58.414 45.455 0.00 0.00 33.63 2.69
204 205 3.257375 TGCAAGTAGTTCTTCGCTAAGGA 59.743 43.478 0.00 0.00 33.63 3.36
205 206 4.243270 GCAAGTAGTTCTTCGCTAAGGAA 58.757 43.478 0.00 0.00 33.63 3.36
206 207 4.870991 GCAAGTAGTTCTTCGCTAAGGAAT 59.129 41.667 0.00 0.00 33.63 3.01
207 208 5.351740 GCAAGTAGTTCTTCGCTAAGGAATT 59.648 40.000 0.00 0.00 33.63 2.17
208 209 6.128254 GCAAGTAGTTCTTCGCTAAGGAATTT 60.128 38.462 0.00 0.00 33.63 1.82
209 210 7.457060 CAAGTAGTTCTTCGCTAAGGAATTTC 58.543 38.462 0.00 0.00 33.63 2.17
210 211 6.107343 AGTAGTTCTTCGCTAAGGAATTTCC 58.893 40.000 7.39 7.39 36.58 3.13
225 226 6.805150 AGGAATTTCCTTACCCTGAAATTCT 58.195 36.000 24.97 14.94 46.91 2.40
226 227 6.892456 AGGAATTTCCTTACCCTGAAATTCTC 59.108 38.462 24.97 18.65 46.91 2.87
227 228 7.477683 AGGAATTTCCTTACCCTGAAATTCTCA 60.478 37.037 24.97 0.00 46.91 3.27
249 250 9.988350 TCTCAGTGAAGAATTTATAAAAATCGC 57.012 29.630 1.21 5.44 34.12 4.58
250 251 9.226345 CTCAGTGAAGAATTTATAAAAATCGCC 57.774 33.333 1.21 3.09 34.12 5.54
251 252 8.956426 TCAGTGAAGAATTTATAAAAATCGCCT 58.044 29.630 1.21 0.00 34.12 5.52
259 260 9.406828 GAATTTATAAAAATCGCCTATTCACCC 57.593 33.333 1.21 0.00 34.12 4.61
260 261 6.887626 TTATAAAAATCGCCTATTCACCCC 57.112 37.500 0.00 0.00 0.00 4.95
261 262 2.067365 AAAATCGCCTATTCACCCCC 57.933 50.000 0.00 0.00 0.00 5.40
278 279 1.674962 CCCCCTCTAGTCGACTTAACG 59.325 57.143 25.44 10.17 0.00 3.18
279 280 1.065251 CCCCTCTAGTCGACTTAACGC 59.935 57.143 25.44 0.00 0.00 4.84
280 281 1.741706 CCCTCTAGTCGACTTAACGCA 59.258 52.381 25.44 2.97 0.00 5.24
281 282 2.477525 CCCTCTAGTCGACTTAACGCAC 60.478 54.545 25.44 0.00 0.00 5.34
282 283 2.419324 CCTCTAGTCGACTTAACGCACT 59.581 50.000 25.44 0.00 0.00 4.40
283 284 3.119919 CCTCTAGTCGACTTAACGCACTT 60.120 47.826 25.44 0.00 0.00 3.16
284 285 4.075763 TCTAGTCGACTTAACGCACTTC 57.924 45.455 25.44 0.00 0.00 3.01
285 286 2.061740 AGTCGACTTAACGCACTTCC 57.938 50.000 13.58 0.00 0.00 3.46
286 287 1.338973 AGTCGACTTAACGCACTTCCA 59.661 47.619 13.58 0.00 0.00 3.53
287 288 2.029290 AGTCGACTTAACGCACTTCCAT 60.029 45.455 13.58 0.00 0.00 3.41
288 289 2.092211 GTCGACTTAACGCACTTCCATG 59.908 50.000 8.70 0.00 0.00 3.66
289 290 2.029739 TCGACTTAACGCACTTCCATGA 60.030 45.455 0.00 0.00 0.00 3.07
290 291 2.092211 CGACTTAACGCACTTCCATGAC 59.908 50.000 0.00 0.00 0.00 3.06
291 292 2.415512 GACTTAACGCACTTCCATGACC 59.584 50.000 0.00 0.00 0.00 4.02
292 293 2.224426 ACTTAACGCACTTCCATGACCA 60.224 45.455 0.00 0.00 0.00 4.02
293 294 2.093306 TAACGCACTTCCATGACCAG 57.907 50.000 0.00 0.00 0.00 4.00
294 295 1.237285 AACGCACTTCCATGACCAGC 61.237 55.000 0.00 0.00 0.00 4.85
295 296 2.743752 CGCACTTCCATGACCAGCG 61.744 63.158 0.00 0.00 37.68 5.18
296 297 3.044059 GCACTTCCATGACCAGCGC 62.044 63.158 0.00 0.00 0.00 5.92
297 298 2.434884 ACTTCCATGACCAGCGCG 60.435 61.111 0.00 0.00 0.00 6.86
298 299 2.125552 CTTCCATGACCAGCGCGA 60.126 61.111 12.10 0.00 0.00 5.87
299 300 2.434185 TTCCATGACCAGCGCGAC 60.434 61.111 12.10 0.04 0.00 5.19
300 301 3.233259 TTCCATGACCAGCGCGACA 62.233 57.895 12.10 1.12 0.00 4.35
301 302 3.190849 CCATGACCAGCGCGACAG 61.191 66.667 12.10 0.00 0.00 3.51
302 303 2.433145 CATGACCAGCGCGACAGT 60.433 61.111 12.10 1.72 0.00 3.55
303 304 2.125912 ATGACCAGCGCGACAGTC 60.126 61.111 12.10 13.20 0.00 3.51
304 305 2.640302 ATGACCAGCGCGACAGTCT 61.640 57.895 12.10 0.00 0.00 3.24
305 306 2.049063 GACCAGCGCGACAGTCTT 60.049 61.111 12.10 0.00 0.00 3.01
306 307 2.356313 ACCAGCGCGACAGTCTTG 60.356 61.111 12.10 0.00 0.00 3.02
307 308 3.114616 CCAGCGCGACAGTCTTGG 61.115 66.667 12.10 0.00 0.00 3.61
308 309 3.782244 CAGCGCGACAGTCTTGGC 61.782 66.667 12.10 0.00 0.00 4.52
309 310 4.299547 AGCGCGACAGTCTTGGCA 62.300 61.111 12.10 0.00 30.39 4.92
310 311 3.121030 GCGCGACAGTCTTGGCAT 61.121 61.111 12.10 0.00 30.39 4.40
311 312 2.680913 GCGCGACAGTCTTGGCATT 61.681 57.895 12.10 0.00 30.39 3.56
312 313 1.133253 CGCGACAGTCTTGGCATTG 59.867 57.895 0.00 0.00 30.39 2.82
313 314 1.291184 CGCGACAGTCTTGGCATTGA 61.291 55.000 0.00 0.00 30.39 2.57
314 315 0.874390 GCGACAGTCTTGGCATTGAA 59.126 50.000 0.00 0.00 30.39 2.69
315 316 1.470098 GCGACAGTCTTGGCATTGAAT 59.530 47.619 0.00 0.00 30.39 2.57
316 317 2.476854 GCGACAGTCTTGGCATTGAATC 60.477 50.000 0.00 0.00 30.39 2.52
317 318 2.096496 CGACAGTCTTGGCATTGAATCC 59.904 50.000 0.00 0.00 30.39 3.01
318 319 2.424956 GACAGTCTTGGCATTGAATCCC 59.575 50.000 0.00 0.00 30.39 3.85
319 320 1.402968 CAGTCTTGGCATTGAATCCCG 59.597 52.381 0.00 0.00 0.00 5.14
320 321 0.101219 GTCTTGGCATTGAATCCCGC 59.899 55.000 0.00 0.00 0.00 6.13
321 322 1.064621 CTTGGCATTGAATCCCGCG 59.935 57.895 0.00 0.00 0.00 6.46
322 323 2.340453 CTTGGCATTGAATCCCGCGG 62.340 60.000 21.04 21.04 0.00 6.46
323 324 3.595758 GGCATTGAATCCCGCGGG 61.596 66.667 39.13 39.13 0.00 6.13
337 338 4.271816 CGGGACCGAGGCGATGAG 62.272 72.222 4.40 0.00 42.83 2.90
338 339 3.917760 GGGACCGAGGCGATGAGG 61.918 72.222 0.00 0.00 0.00 3.86
339 340 2.833582 GGACCGAGGCGATGAGGA 60.834 66.667 0.00 0.00 0.00 3.71
340 341 2.413765 GACCGAGGCGATGAGGAC 59.586 66.667 0.00 0.00 0.00 3.85
341 342 3.471244 GACCGAGGCGATGAGGACG 62.471 68.421 0.00 0.00 0.00 4.79
342 343 3.209812 CCGAGGCGATGAGGACGA 61.210 66.667 0.00 0.00 0.00 4.20
343 344 2.024871 CGAGGCGATGAGGACGAC 59.975 66.667 0.00 0.00 39.24 4.34
344 345 2.024871 GAGGCGATGAGGACGACG 59.975 66.667 0.00 0.00 44.04 5.12
345 346 2.437895 AGGCGATGAGGACGACGA 60.438 61.111 0.00 0.00 44.04 4.20
346 347 1.989966 GAGGCGATGAGGACGACGAA 61.990 60.000 0.00 0.00 44.04 3.85
347 348 1.586564 GGCGATGAGGACGACGAAG 60.587 63.158 0.00 0.00 0.00 3.79
348 349 1.586564 GCGATGAGGACGACGAAGG 60.587 63.158 0.00 0.00 0.00 3.46
349 350 1.586564 CGATGAGGACGACGAAGGC 60.587 63.158 0.00 0.00 0.00 4.35
350 351 1.586564 GATGAGGACGACGAAGGCG 60.587 63.158 0.00 0.00 44.79 5.52
351 352 2.938539 GATGAGGACGACGAAGGCGG 62.939 65.000 0.00 0.00 43.17 6.13
358 359 4.415332 GACGAAGGCGGCGAGTCA 62.415 66.667 22.14 0.00 43.17 3.41
359 360 4.719369 ACGAAGGCGGCGAGTCAC 62.719 66.667 12.98 0.00 43.17 3.67
360 361 4.421479 CGAAGGCGGCGAGTCACT 62.421 66.667 12.98 0.00 0.00 3.41
361 362 2.811317 GAAGGCGGCGAGTCACTG 60.811 66.667 12.98 0.00 0.00 3.66
362 363 3.282745 GAAGGCGGCGAGTCACTGA 62.283 63.158 12.98 0.00 0.00 3.41
363 364 3.575351 AAGGCGGCGAGTCACTGAC 62.575 63.158 12.98 0.38 0.00 3.51
364 365 4.057428 GGCGGCGAGTCACTGACT 62.057 66.667 12.98 11.69 46.42 3.41
371 372 3.374402 AGTCACTGACTCGGCGGG 61.374 66.667 4.58 4.58 38.71 6.13
383 384 4.678743 GGCGGGCCCACTCCTTTT 62.679 66.667 24.92 0.00 0.00 2.27
384 385 3.062466 GCGGGCCCACTCCTTTTC 61.062 66.667 24.92 0.00 0.00 2.29
385 386 2.746277 CGGGCCCACTCCTTTTCG 60.746 66.667 24.92 0.00 0.00 3.46
386 387 3.062466 GGGCCCACTCCTTTTCGC 61.062 66.667 19.95 0.00 0.00 4.70
387 388 3.431725 GGCCCACTCCTTTTCGCG 61.432 66.667 0.00 0.00 0.00 5.87
388 389 4.103103 GCCCACTCCTTTTCGCGC 62.103 66.667 0.00 0.00 0.00 6.86
389 390 3.431725 CCCACTCCTTTTCGCGCC 61.432 66.667 0.00 0.00 0.00 6.53
390 391 2.668212 CCACTCCTTTTCGCGCCA 60.668 61.111 0.00 0.00 0.00 5.69
391 392 2.258013 CCACTCCTTTTCGCGCCAA 61.258 57.895 0.00 0.00 0.00 4.52
392 393 1.652012 CACTCCTTTTCGCGCCAAA 59.348 52.632 0.00 0.00 0.00 3.28
393 394 0.030101 CACTCCTTTTCGCGCCAAAA 59.970 50.000 12.36 12.36 0.00 2.44
394 395 0.741915 ACTCCTTTTCGCGCCAAAAA 59.258 45.000 13.82 13.35 0.00 1.94
395 396 1.128513 CTCCTTTTCGCGCCAAAAAC 58.871 50.000 13.82 0.00 0.00 2.43
396 397 0.592754 TCCTTTTCGCGCCAAAAACG 60.593 50.000 13.82 7.37 0.00 3.60
397 398 0.868177 CCTTTTCGCGCCAAAAACGT 60.868 50.000 13.82 0.00 0.00 3.99
398 399 0.917939 CTTTTCGCGCCAAAAACGTT 59.082 45.000 13.82 0.00 0.00 3.99
399 400 1.322040 CTTTTCGCGCCAAAAACGTTT 59.678 42.857 13.82 7.96 0.00 3.60
400 401 0.915227 TTTCGCGCCAAAAACGTTTC 59.085 45.000 15.01 0.35 0.00 2.78
401 402 0.866483 TTCGCGCCAAAAACGTTTCC 60.866 50.000 15.01 2.72 0.00 3.13
402 403 2.297195 CGCGCCAAAAACGTTTCCC 61.297 57.895 15.01 2.37 0.00 3.97
403 404 1.952133 GCGCCAAAAACGTTTCCCC 60.952 57.895 15.01 2.72 0.00 4.81
404 405 1.300311 CGCCAAAAACGTTTCCCCC 60.300 57.895 15.01 3.07 0.00 5.40
405 406 1.300311 GCCAAAAACGTTTCCCCCG 60.300 57.895 15.01 1.90 0.00 5.73
406 407 1.364536 CCAAAAACGTTTCCCCCGG 59.635 57.895 15.01 6.85 0.00 5.73
407 408 1.300311 CAAAAACGTTTCCCCCGGC 60.300 57.895 15.01 0.00 0.00 6.13
408 409 2.847754 AAAAACGTTTCCCCCGGCG 61.848 57.895 15.01 0.00 0.00 6.46
409 410 3.771110 AAAACGTTTCCCCCGGCGA 62.771 57.895 15.01 0.00 0.00 5.54
410 411 4.994471 AACGTTTCCCCCGGCGAC 62.994 66.667 9.30 0.00 0.00 5.19
462 463 3.370231 GTCCGCCGGTGCCAAAAT 61.370 61.111 10.27 0.00 0.00 1.82
463 464 3.059386 TCCGCCGGTGCCAAAATC 61.059 61.111 10.27 0.00 0.00 2.17
464 465 4.474846 CCGCCGGTGCCAAAATCG 62.475 66.667 10.27 0.00 0.00 3.34
465 466 4.474846 CGCCGGTGCCAAAATCGG 62.475 66.667 0.00 0.00 44.70 4.18
473 474 2.882132 CCAAAATCGGCCCGAACC 59.118 61.111 11.19 0.00 39.99 3.62
482 483 4.394078 GCCCGAACCGGCGAAAAC 62.394 66.667 9.30 0.00 46.86 2.43
483 484 2.667199 CCCGAACCGGCGAAAACT 60.667 61.111 9.30 0.00 46.86 2.66
484 485 2.554272 CCGAACCGGCGAAAACTG 59.446 61.111 9.30 0.00 41.17 3.16
485 486 2.248835 CCGAACCGGCGAAAACTGT 61.249 57.895 9.30 0.00 41.17 3.55
486 487 1.083015 CGAACCGGCGAAAACTGTG 60.083 57.895 9.30 0.00 0.00 3.66
487 488 1.370051 GAACCGGCGAAAACTGTGC 60.370 57.895 9.30 0.00 0.00 4.57
488 489 1.782028 GAACCGGCGAAAACTGTGCT 61.782 55.000 9.30 0.00 0.00 4.40
489 490 1.381165 AACCGGCGAAAACTGTGCTT 61.381 50.000 9.30 0.00 0.00 3.91
490 491 1.358759 CCGGCGAAAACTGTGCTTT 59.641 52.632 9.30 0.00 0.00 3.51
491 492 0.248866 CCGGCGAAAACTGTGCTTTT 60.249 50.000 9.30 0.00 0.00 2.27
492 493 0.845768 CGGCGAAAACTGTGCTTTTG 59.154 50.000 0.00 0.00 0.00 2.44
493 494 1.208259 GGCGAAAACTGTGCTTTTGG 58.792 50.000 0.00 0.00 0.00 3.28
494 495 1.202359 GGCGAAAACTGTGCTTTTGGA 60.202 47.619 0.00 0.00 0.00 3.53
495 496 2.119457 GCGAAAACTGTGCTTTTGGAG 58.881 47.619 0.00 0.00 0.00 3.86
496 497 2.731217 CGAAAACTGTGCTTTTGGAGG 58.269 47.619 0.00 0.00 0.00 4.30
497 498 2.473816 GAAAACTGTGCTTTTGGAGGC 58.526 47.619 0.00 0.00 0.00 4.70
498 499 1.484038 AAACTGTGCTTTTGGAGGCA 58.516 45.000 0.00 0.00 36.01 4.75
499 500 1.708341 AACTGTGCTTTTGGAGGCAT 58.292 45.000 0.00 0.00 40.66 4.40
500 501 0.963962 ACTGTGCTTTTGGAGGCATG 59.036 50.000 0.00 0.00 40.66 4.06
501 502 1.250328 CTGTGCTTTTGGAGGCATGA 58.750 50.000 0.00 0.00 40.66 3.07
502 503 0.961019 TGTGCTTTTGGAGGCATGAC 59.039 50.000 0.00 0.00 40.66 3.06
503 504 1.251251 GTGCTTTTGGAGGCATGACT 58.749 50.000 0.00 0.00 40.66 3.41
504 505 1.068055 GTGCTTTTGGAGGCATGACTG 60.068 52.381 5.31 0.00 40.66 3.51
505 506 0.529378 GCTTTTGGAGGCATGACTGG 59.471 55.000 5.31 0.00 0.00 4.00
506 507 1.887956 GCTTTTGGAGGCATGACTGGA 60.888 52.381 5.31 0.00 0.00 3.86
507 508 1.815003 CTTTTGGAGGCATGACTGGAC 59.185 52.381 5.31 0.00 0.00 4.02
508 509 0.038166 TTTGGAGGCATGACTGGACC 59.962 55.000 5.31 0.54 0.00 4.46
509 510 2.184020 TTGGAGGCATGACTGGACCG 62.184 60.000 5.31 0.00 0.00 4.79
510 511 2.359169 GGAGGCATGACTGGACCGA 61.359 63.158 5.31 0.00 0.00 4.69
511 512 1.596934 GAGGCATGACTGGACCGAA 59.403 57.895 5.31 0.00 0.00 4.30
512 513 0.741221 GAGGCATGACTGGACCGAAC 60.741 60.000 5.31 0.00 0.00 3.95
513 514 1.745489 GGCATGACTGGACCGAACC 60.745 63.158 0.00 0.00 0.00 3.62
514 515 2.100631 GCATGACTGGACCGAACCG 61.101 63.158 0.00 0.00 0.00 4.44
531 532 2.597510 GGTGACGCAAAAGGGCCT 60.598 61.111 0.00 0.00 0.00 5.19
532 533 2.200337 GGTGACGCAAAAGGGCCTT 61.200 57.895 14.48 14.48 0.00 4.35
533 534 1.739667 GTGACGCAAAAGGGCCTTT 59.260 52.632 25.68 25.68 34.94 3.11
534 535 0.597377 GTGACGCAAAAGGGCCTTTG 60.597 55.000 31.06 23.63 38.97 2.77
535 536 1.006220 GACGCAAAAGGGCCTTTGG 60.006 57.895 31.06 28.57 36.89 3.28
536 537 1.456705 ACGCAAAAGGGCCTTTGGA 60.457 52.632 33.00 0.00 36.89 3.53
537 538 1.290009 CGCAAAAGGGCCTTTGGAG 59.710 57.895 33.00 26.90 36.89 3.86
538 539 1.673477 GCAAAAGGGCCTTTGGAGG 59.327 57.895 33.00 21.96 46.50 4.30
539 540 1.830587 GCAAAAGGGCCTTTGGAGGG 61.831 60.000 33.00 19.82 43.75 4.30
547 548 2.279842 CCTTTGGAGGGCATGTTGG 58.720 57.895 0.00 0.00 39.55 3.77
548 549 1.259840 CCTTTGGAGGGCATGTTGGG 61.260 60.000 0.00 0.00 39.55 4.12
549 550 1.229145 TTTGGAGGGCATGTTGGGG 60.229 57.895 0.00 0.00 0.00 4.96
550 551 2.745255 TTTGGAGGGCATGTTGGGGG 62.745 60.000 0.00 0.00 0.00 5.40
551 552 3.672503 GGAGGGCATGTTGGGGGT 61.673 66.667 0.00 0.00 0.00 4.95
552 553 2.362889 GAGGGCATGTTGGGGGTG 60.363 66.667 0.00 0.00 0.00 4.61
553 554 4.702274 AGGGCATGTTGGGGGTGC 62.702 66.667 0.00 0.00 38.12 5.01
564 565 4.864334 GGGGTGCGGCTGGAGATG 62.864 72.222 0.00 0.00 0.00 2.90
566 567 4.479993 GGTGCGGCTGGAGATGCT 62.480 66.667 0.00 0.00 0.00 3.79
567 568 2.894387 GTGCGGCTGGAGATGCTC 60.894 66.667 0.00 0.00 0.00 4.26
568 569 3.079478 TGCGGCTGGAGATGCTCT 61.079 61.111 0.00 0.00 0.00 4.09
569 570 2.188994 GCGGCTGGAGATGCTCTT 59.811 61.111 0.00 0.00 0.00 2.85
570 571 1.329913 TGCGGCTGGAGATGCTCTTA 61.330 55.000 0.00 0.00 0.00 2.10
571 572 0.034616 GCGGCTGGAGATGCTCTTAT 59.965 55.000 0.00 0.00 0.00 1.73
572 573 1.938926 GCGGCTGGAGATGCTCTTATC 60.939 57.143 0.00 0.00 0.00 1.75
573 574 1.337635 CGGCTGGAGATGCTCTTATCC 60.338 57.143 0.00 0.00 0.00 2.59
574 575 1.977129 GGCTGGAGATGCTCTTATCCT 59.023 52.381 0.00 0.00 32.79 3.24
575 576 2.028203 GGCTGGAGATGCTCTTATCCTC 60.028 54.545 0.00 0.00 32.79 3.71
576 577 2.028203 GCTGGAGATGCTCTTATCCTCC 60.028 54.545 0.00 0.00 32.79 4.30
577 578 3.509442 CTGGAGATGCTCTTATCCTCCT 58.491 50.000 0.00 0.00 32.79 3.69
578 579 3.505386 TGGAGATGCTCTTATCCTCCTC 58.495 50.000 0.00 0.00 32.79 3.71
579 580 3.116977 TGGAGATGCTCTTATCCTCCTCA 60.117 47.826 0.00 0.00 32.79 3.86
580 581 3.511146 GGAGATGCTCTTATCCTCCTCAG 59.489 52.174 0.00 0.00 0.00 3.35
581 582 4.406456 GAGATGCTCTTATCCTCCTCAGA 58.594 47.826 0.00 0.00 0.00 3.27
582 583 4.151883 AGATGCTCTTATCCTCCTCAGAC 58.848 47.826 0.00 0.00 0.00 3.51
583 584 2.302260 TGCTCTTATCCTCCTCAGACG 58.698 52.381 0.00 0.00 0.00 4.18
584 585 1.000717 GCTCTTATCCTCCTCAGACGC 60.001 57.143 0.00 0.00 0.00 5.19
585 586 2.582052 CTCTTATCCTCCTCAGACGCT 58.418 52.381 0.00 0.00 0.00 5.07
586 587 3.745799 CTCTTATCCTCCTCAGACGCTA 58.254 50.000 0.00 0.00 0.00 4.26
587 588 4.331968 CTCTTATCCTCCTCAGACGCTAT 58.668 47.826 0.00 0.00 0.00 2.97
588 589 5.492895 CTCTTATCCTCCTCAGACGCTATA 58.507 45.833 0.00 0.00 0.00 1.31
589 590 5.247084 TCTTATCCTCCTCAGACGCTATAC 58.753 45.833 0.00 0.00 0.00 1.47
590 591 2.273538 TCCTCCTCAGACGCTATACC 57.726 55.000 0.00 0.00 0.00 2.73
591 592 0.875728 CCTCCTCAGACGCTATACCG 59.124 60.000 0.00 0.00 0.00 4.02
592 593 1.542767 CCTCCTCAGACGCTATACCGA 60.543 57.143 0.00 0.00 0.00 4.69
593 594 1.801771 CTCCTCAGACGCTATACCGAG 59.198 57.143 0.00 0.00 0.00 4.63
594 595 0.875728 CCTCAGACGCTATACCGAGG 59.124 60.000 0.00 0.00 34.54 4.63
595 596 1.542767 CCTCAGACGCTATACCGAGGA 60.543 57.143 0.00 0.00 42.18 3.71
596 597 2.428491 CTCAGACGCTATACCGAGGAT 58.572 52.381 0.00 0.00 0.00 3.24
597 598 2.814919 CTCAGACGCTATACCGAGGATT 59.185 50.000 0.00 0.00 0.00 3.01
598 599 2.552743 TCAGACGCTATACCGAGGATTG 59.447 50.000 0.00 0.00 0.00 2.67
613 614 5.934625 CCGAGGATTGGTTATTTAGAGATGG 59.065 44.000 0.00 0.00 33.79 3.51
614 615 5.409826 CGAGGATTGGTTATTTAGAGATGGC 59.590 44.000 0.00 0.00 0.00 4.40
615 616 5.635120 AGGATTGGTTATTTAGAGATGGCC 58.365 41.667 0.00 0.00 0.00 5.36
662 664 1.655114 GGCCCAACCCACCCTATCAT 61.655 60.000 0.00 0.00 0.00 2.45
670 672 3.981212 ACCCACCCTATCATCCTTTTTG 58.019 45.455 0.00 0.00 0.00 2.44
671 673 3.596046 ACCCACCCTATCATCCTTTTTGA 59.404 43.478 0.00 0.00 0.00 2.69
672 674 4.045334 ACCCACCCTATCATCCTTTTTGAA 59.955 41.667 0.00 0.00 0.00 2.69
673 675 4.646492 CCCACCCTATCATCCTTTTTGAAG 59.354 45.833 0.00 0.00 0.00 3.02
675 680 5.951747 CCACCCTATCATCCTTTTTGAAGAA 59.048 40.000 0.00 0.00 0.00 2.52
679 684 7.613411 ACCCTATCATCCTTTTTGAAGAAGAAG 59.387 37.037 0.00 0.00 0.00 2.85
680 685 7.831193 CCCTATCATCCTTTTTGAAGAAGAAGA 59.169 37.037 0.00 0.00 0.00 2.87
697 702 8.257830 AGAAGAAGAAAAATATCTTGTCCGTC 57.742 34.615 0.00 0.00 39.70 4.79
702 707 3.627395 AAATATCTTGTCCGTCCTGCA 57.373 42.857 0.00 0.00 0.00 4.41
718 723 2.229792 CTGCAACTACCACAACCACAT 58.770 47.619 0.00 0.00 0.00 3.21
746 765 1.527380 GCCAGTCGGACCAACCAAA 60.527 57.895 4.14 0.00 38.90 3.28
769 788 3.004315 ACACACAAACGCCCAAGAAATAG 59.996 43.478 0.00 0.00 0.00 1.73
776 795 1.721487 CCCAAGAAATAGCACGCCG 59.279 57.895 0.00 0.00 0.00 6.46
777 796 1.024579 CCCAAGAAATAGCACGCCGT 61.025 55.000 0.00 0.00 0.00 5.68
812 843 2.721167 CCATCGACCCGAGCTCCAA 61.721 63.158 8.47 0.00 39.91 3.53
844 875 4.202398 ACCATACATCTCCACATGTCCATC 60.202 45.833 0.00 0.00 38.07 3.51
847 878 2.172082 ACATCTCCACATGTCCATCCAG 59.828 50.000 0.00 0.00 30.76 3.86
848 879 2.252535 TCTCCACATGTCCATCCAGA 57.747 50.000 0.00 0.00 0.00 3.86
849 880 2.113807 TCTCCACATGTCCATCCAGAG 58.886 52.381 0.00 0.00 0.00 3.35
850 881 0.543277 TCCACATGTCCATCCAGAGC 59.457 55.000 0.00 0.00 0.00 4.09
851 882 0.545171 CCACATGTCCATCCAGAGCT 59.455 55.000 0.00 0.00 0.00 4.09
854 885 1.415659 ACATGTCCATCCAGAGCTAGC 59.584 52.381 6.62 6.62 0.00 3.42
855 886 1.693062 CATGTCCATCCAGAGCTAGCT 59.307 52.381 19.45 19.45 0.00 3.32
870 901 4.085302 GCTCTAGCTGACGCAGTG 57.915 61.111 0.00 0.00 38.72 3.66
882 913 1.838913 ACGCAGTGTGATGTTTTTGC 58.161 45.000 11.43 0.00 42.51 3.68
883 914 0.771756 CGCAGTGTGATGTTTTTGCG 59.228 50.000 0.00 2.21 46.41 4.85
884 915 0.503961 GCAGTGTGATGTTTTTGCGC 59.496 50.000 0.00 0.00 0.00 6.09
885 916 1.865248 GCAGTGTGATGTTTTTGCGCT 60.865 47.619 9.73 0.00 0.00 5.92
886 917 2.462889 CAGTGTGATGTTTTTGCGCTT 58.537 42.857 9.73 0.00 0.00 4.68
904 935 2.791004 GCTTGCGCCATTAATCAATCAC 59.209 45.455 4.18 0.00 0.00 3.06
906 937 1.680735 TGCGCCATTAATCAATCACCC 59.319 47.619 4.18 0.00 0.00 4.61
907 938 1.680735 GCGCCATTAATCAATCACCCA 59.319 47.619 0.00 0.00 0.00 4.51
908 939 2.287788 GCGCCATTAATCAATCACCCAG 60.288 50.000 0.00 0.00 0.00 4.45
909 940 2.951642 CGCCATTAATCAATCACCCAGT 59.048 45.455 0.00 0.00 0.00 4.00
910 941 3.003689 CGCCATTAATCAATCACCCAGTC 59.996 47.826 0.00 0.00 0.00 3.51
911 942 3.319122 GCCATTAATCAATCACCCAGTCC 59.681 47.826 0.00 0.00 0.00 3.85
920 980 2.203788 ACCCAGTCCCGAGCTCAA 60.204 61.111 15.40 0.00 0.00 3.02
978 1039 5.047660 AGCTCAGAGCCGTTATTTATAGGAG 60.048 44.000 19.40 0.00 43.77 3.69
981 1042 4.283722 CAGAGCCGTTATTTATAGGAGGGT 59.716 45.833 0.00 0.00 0.00 4.34
982 1043 4.527427 AGAGCCGTTATTTATAGGAGGGTC 59.473 45.833 2.93 2.93 42.93 4.46
983 1044 4.490706 AGCCGTTATTTATAGGAGGGTCT 58.509 43.478 0.00 0.00 0.00 3.85
984 1045 4.527427 AGCCGTTATTTATAGGAGGGTCTC 59.473 45.833 0.00 0.00 0.00 3.36
985 1046 4.282703 GCCGTTATTTATAGGAGGGTCTCA 59.717 45.833 0.00 0.00 31.08 3.27
986 1047 5.046520 GCCGTTATTTATAGGAGGGTCTCAT 60.047 44.000 0.00 0.00 31.08 2.90
987 1048 6.631962 CCGTTATTTATAGGAGGGTCTCATC 58.368 44.000 0.00 0.00 31.08 2.92
988 1049 6.437793 CCGTTATTTATAGGAGGGTCTCATCT 59.562 42.308 0.00 0.00 31.08 2.90
989 1050 7.316640 CGTTATTTATAGGAGGGTCTCATCTG 58.683 42.308 0.00 0.00 31.08 2.90
990 1051 5.753721 ATTTATAGGAGGGTCTCATCTGC 57.246 43.478 0.00 0.00 31.08 4.26
991 1052 2.022718 ATAGGAGGGTCTCATCTGCC 57.977 55.000 0.00 0.00 31.08 4.85
992 1053 0.468214 TAGGAGGGTCTCATCTGCCG 60.468 60.000 0.00 0.00 31.08 5.69
994 1055 3.781770 GAGGGTCTCATCTGCCGCG 62.782 68.421 0.00 0.00 0.00 6.46
996 1057 4.819761 GGTCTCATCTGCCGCGCA 62.820 66.667 8.75 1.04 36.92 6.09
1028 1089 1.219664 CCCCCAATAGCGACGACAA 59.780 57.895 0.00 0.00 0.00 3.18
1459 1523 4.475135 GCTTCCTGGCCGAGACCC 62.475 72.222 0.00 0.00 0.00 4.46
1460 1524 3.003173 CTTCCTGGCCGAGACCCA 61.003 66.667 0.00 0.00 0.00 4.51
1593 1657 2.604174 GGTGTTCGGCAAGACGGTG 61.604 63.158 0.00 0.00 0.00 4.94
2079 5023 1.738030 CGCGATTAGAGGGGTTCGTTT 60.738 52.381 0.00 0.00 0.00 3.60
2083 5027 3.124636 CGATTAGAGGGGTTCGTTTGTTG 59.875 47.826 0.00 0.00 0.00 3.33
2117 5063 4.266714 TGTCTTTCCTTCTTTTCGTGGTT 58.733 39.130 0.00 0.00 0.00 3.67
2125 5071 1.946768 TCTTTTCGTGGTTTGCAGAGG 59.053 47.619 0.00 0.00 0.00 3.69
2193 5151 5.061179 CGGGTGGGGATTATTTACTTACAG 58.939 45.833 0.00 0.00 0.00 2.74
2196 5154 6.101588 GGGTGGGGATTATTTACTTACAGGTA 59.898 42.308 0.00 0.00 0.00 3.08
2200 5158 9.856162 TGGGGATTATTTACTTACAGGTAAATC 57.144 33.333 11.41 1.72 44.24 2.17
2210 5168 2.344592 ACAGGTAAATCTGGGACACCA 58.655 47.619 0.00 0.00 46.94 4.17
2236 5194 2.704725 AATGGTGTTGATGTTCGTGC 57.295 45.000 0.00 0.00 0.00 5.34
2248 5206 1.398739 TGTTCGTGCGTGATGTTTTGT 59.601 42.857 0.00 0.00 0.00 2.83
2249 5207 2.608090 TGTTCGTGCGTGATGTTTTGTA 59.392 40.909 0.00 0.00 0.00 2.41
2250 5208 2.934107 TCGTGCGTGATGTTTTGTAC 57.066 45.000 0.00 0.00 0.00 2.90
2375 5334 6.424812 AGAAAAGTTTTCATGCAAATAGCCAC 59.575 34.615 26.06 0.00 44.83 5.01
2376 5335 5.473066 AAGTTTTCATGCAAATAGCCACT 57.527 34.783 0.00 0.00 44.83 4.00
2377 5336 4.813027 AGTTTTCATGCAAATAGCCACTG 58.187 39.130 0.00 0.00 44.83 3.66
2396 5355 6.869388 GCCACTGCTAGTAGGATAGTTAATTC 59.131 42.308 12.78 0.00 33.53 2.17
2400 5359 7.452189 ACTGCTAGTAGGATAGTTAATTCCTCC 59.548 40.741 12.78 0.90 41.50 4.30
2486 5610 6.918067 AGAAAAAGGGAAATACTTTCAGGG 57.082 37.500 2.39 0.00 41.43 4.45
2502 5626 2.574018 GGGTGGCTTTCAACTGGCC 61.574 63.158 0.00 0.00 45.45 5.36
2510 5634 0.749649 TTTCAACTGGCCGCAATGTT 59.250 45.000 0.00 0.00 0.00 2.71
2557 5681 1.911293 TTGCGATCAAGGCAAGCGTC 61.911 55.000 2.78 0.00 44.79 5.19
2596 5720 2.546795 CGACAGTGGACAGCTTCTTTCT 60.547 50.000 0.00 0.00 0.00 2.52
2624 5748 9.035607 CACTAACATCACATCAGGTCTATTTAC 57.964 37.037 0.00 0.00 0.00 2.01
2826 5959 1.779061 AAGGTGTTGCCAGGGACGAT 61.779 55.000 0.00 0.00 40.61 3.73
2858 5995 1.468914 GATGAAGGAAAGTTGGCGGTC 59.531 52.381 0.00 0.00 0.00 4.79
2861 5998 0.036306 AAGGAAAGTTGGCGGTCGAT 59.964 50.000 0.00 0.00 0.00 3.59
2952 6161 1.051556 GCGGGGAGGAAGGAGAAGAT 61.052 60.000 0.00 0.00 0.00 2.40
2967 6176 1.929836 GAAGATGATGGCGAGTGACAC 59.070 52.381 0.00 0.00 34.45 3.67
2971 6180 1.517257 GATGGCGAGTGACACGAGG 60.517 63.158 6.60 0.00 34.45 4.63
2972 6181 2.890847 GATGGCGAGTGACACGAGGG 62.891 65.000 6.60 0.00 34.45 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.213799 GTCTTCACTCAAAGTCTTCAAATAGAT 57.786 33.333 0.00 0.00 0.00 1.98
4 5 8.424918 AGTCTTCACTCAAAGTCTTCAAATAGA 58.575 33.333 0.00 0.00 0.00 1.98
5 6 8.600449 AGTCTTCACTCAAAGTCTTCAAATAG 57.400 34.615 0.00 0.00 0.00 1.73
6 7 8.964476 AAGTCTTCACTCAAAGTCTTCAAATA 57.036 30.769 0.00 0.00 31.77 1.40
7 8 7.872113 AAGTCTTCACTCAAAGTCTTCAAAT 57.128 32.000 0.00 0.00 31.77 2.32
8 9 7.607991 AGAAAGTCTTCACTCAAAGTCTTCAAA 59.392 33.333 0.00 0.00 34.82 2.69
9 10 7.106239 AGAAAGTCTTCACTCAAAGTCTTCAA 58.894 34.615 0.00 0.00 34.82 2.69
10 11 6.644347 AGAAAGTCTTCACTCAAAGTCTTCA 58.356 36.000 0.00 0.00 34.82 3.02
11 12 6.758886 TGAGAAAGTCTTCACTCAAAGTCTTC 59.241 38.462 15.48 0.00 34.82 2.87
12 13 6.644347 TGAGAAAGTCTTCACTCAAAGTCTT 58.356 36.000 15.48 0.00 36.58 3.01
13 14 6.227298 TGAGAAAGTCTTCACTCAAAGTCT 57.773 37.500 15.48 0.17 36.63 3.24
14 15 6.910536 TTGAGAAAGTCTTCACTCAAAGTC 57.089 37.500 21.96 1.43 43.30 3.01
19 20 6.595682 AGGAAATTGAGAAAGTCTTCACTCA 58.404 36.000 14.45 14.45 37.56 3.41
20 21 6.708054 TGAGGAAATTGAGAAAGTCTTCACTC 59.292 38.462 10.81 10.81 33.64 3.51
21 22 6.595682 TGAGGAAATTGAGAAAGTCTTCACT 58.404 36.000 0.00 0.00 33.64 3.41
22 23 6.484977 ACTGAGGAAATTGAGAAAGTCTTCAC 59.515 38.462 0.00 0.00 33.64 3.18
23 24 6.595682 ACTGAGGAAATTGAGAAAGTCTTCA 58.404 36.000 0.00 0.00 33.64 3.02
24 25 7.227512 TGAACTGAGGAAATTGAGAAAGTCTTC 59.772 37.037 0.00 0.00 0.00 2.87
25 26 7.056635 TGAACTGAGGAAATTGAGAAAGTCTT 58.943 34.615 0.00 0.00 0.00 3.01
26 27 6.595682 TGAACTGAGGAAATTGAGAAAGTCT 58.404 36.000 0.00 0.00 0.00 3.24
27 28 6.867662 TGAACTGAGGAAATTGAGAAAGTC 57.132 37.500 0.00 0.00 0.00 3.01
28 29 7.830099 ATTGAACTGAGGAAATTGAGAAAGT 57.170 32.000 0.00 0.00 0.00 2.66
29 30 9.189723 GAAATTGAACTGAGGAAATTGAGAAAG 57.810 33.333 0.00 0.00 0.00 2.62
30 31 8.917088 AGAAATTGAACTGAGGAAATTGAGAAA 58.083 29.630 0.00 0.00 0.00 2.52
31 32 8.469309 AGAAATTGAACTGAGGAAATTGAGAA 57.531 30.769 0.00 0.00 0.00 2.87
32 33 8.469309 AAGAAATTGAACTGAGGAAATTGAGA 57.531 30.769 0.00 0.00 0.00 3.27
33 34 8.355169 TGAAGAAATTGAACTGAGGAAATTGAG 58.645 33.333 0.00 0.00 0.00 3.02
34 35 8.236585 TGAAGAAATTGAACTGAGGAAATTGA 57.763 30.769 0.00 0.00 0.00 2.57
35 36 8.139989 ACTGAAGAAATTGAACTGAGGAAATTG 58.860 33.333 0.00 0.00 0.00 2.32
36 37 8.242729 ACTGAAGAAATTGAACTGAGGAAATT 57.757 30.769 0.00 0.00 0.00 1.82
37 38 7.723172 AGACTGAAGAAATTGAACTGAGGAAAT 59.277 33.333 0.00 0.00 0.00 2.17
38 39 7.012704 CAGACTGAAGAAATTGAACTGAGGAAA 59.987 37.037 0.00 0.00 0.00 3.13
39 40 6.484643 CAGACTGAAGAAATTGAACTGAGGAA 59.515 38.462 0.00 0.00 0.00 3.36
40 41 5.994054 CAGACTGAAGAAATTGAACTGAGGA 59.006 40.000 0.00 0.00 0.00 3.71
41 42 5.762218 ACAGACTGAAGAAATTGAACTGAGG 59.238 40.000 10.08 0.00 0.00 3.86
42 43 6.857777 ACAGACTGAAGAAATTGAACTGAG 57.142 37.500 10.08 0.00 0.00 3.35
43 44 7.121168 ACAAACAGACTGAAGAAATTGAACTGA 59.879 33.333 10.08 0.00 0.00 3.41
44 45 7.253422 ACAAACAGACTGAAGAAATTGAACTG 58.747 34.615 10.08 0.00 0.00 3.16
45 46 7.337942 AGACAAACAGACTGAAGAAATTGAACT 59.662 33.333 10.08 6.87 0.00 3.01
46 47 7.475840 AGACAAACAGACTGAAGAAATTGAAC 58.524 34.615 10.08 5.19 0.00 3.18
47 48 7.630242 AGACAAACAGACTGAAGAAATTGAA 57.370 32.000 10.08 0.00 0.00 2.69
48 49 7.554118 AGAAGACAAACAGACTGAAGAAATTGA 59.446 33.333 10.08 0.00 0.00 2.57
49 50 7.701445 AGAAGACAAACAGACTGAAGAAATTG 58.299 34.615 10.08 6.84 0.00 2.32
50 51 7.872113 AGAAGACAAACAGACTGAAGAAATT 57.128 32.000 10.08 0.00 0.00 1.82
51 52 7.012799 GGAAGAAGACAAACAGACTGAAGAAAT 59.987 37.037 10.08 0.00 0.00 2.17
52 53 6.316390 GGAAGAAGACAAACAGACTGAAGAAA 59.684 38.462 10.08 0.00 0.00 2.52
53 54 5.817816 GGAAGAAGACAAACAGACTGAAGAA 59.182 40.000 10.08 0.00 0.00 2.52
54 55 5.129485 AGGAAGAAGACAAACAGACTGAAGA 59.871 40.000 10.08 0.00 0.00 2.87
55 56 5.236047 CAGGAAGAAGACAAACAGACTGAAG 59.764 44.000 10.08 0.78 0.00 3.02
56 57 5.118990 CAGGAAGAAGACAAACAGACTGAA 58.881 41.667 10.08 0.00 0.00 3.02
57 58 4.162320 ACAGGAAGAAGACAAACAGACTGA 59.838 41.667 10.08 0.00 0.00 3.41
58 59 4.446371 ACAGGAAGAAGACAAACAGACTG 58.554 43.478 0.00 0.00 0.00 3.51
59 60 4.762289 ACAGGAAGAAGACAAACAGACT 57.238 40.909 0.00 0.00 0.00 3.24
60 61 5.819825 AAACAGGAAGAAGACAAACAGAC 57.180 39.130 0.00 0.00 0.00 3.51
61 62 6.710744 GGATAAACAGGAAGAAGACAAACAGA 59.289 38.462 0.00 0.00 0.00 3.41
62 63 6.712547 AGGATAAACAGGAAGAAGACAAACAG 59.287 38.462 0.00 0.00 0.00 3.16
63 64 6.486657 CAGGATAAACAGGAAGAAGACAAACA 59.513 38.462 0.00 0.00 0.00 2.83
64 65 6.486993 ACAGGATAAACAGGAAGAAGACAAAC 59.513 38.462 0.00 0.00 0.00 2.93
65 66 6.486657 CACAGGATAAACAGGAAGAAGACAAA 59.513 38.462 0.00 0.00 0.00 2.83
66 67 5.997746 CACAGGATAAACAGGAAGAAGACAA 59.002 40.000 0.00 0.00 0.00 3.18
67 68 5.071788 ACACAGGATAAACAGGAAGAAGACA 59.928 40.000 0.00 0.00 0.00 3.41
68 69 5.552178 ACACAGGATAAACAGGAAGAAGAC 58.448 41.667 0.00 0.00 0.00 3.01
69 70 5.825593 ACACAGGATAAACAGGAAGAAGA 57.174 39.130 0.00 0.00 0.00 2.87
70 71 6.884280 AAACACAGGATAAACAGGAAGAAG 57.116 37.500 0.00 0.00 0.00 2.85
71 72 6.425721 CGTAAACACAGGATAAACAGGAAGAA 59.574 38.462 0.00 0.00 0.00 2.52
72 73 5.929992 CGTAAACACAGGATAAACAGGAAGA 59.070 40.000 0.00 0.00 0.00 2.87
73 74 5.390567 GCGTAAACACAGGATAAACAGGAAG 60.391 44.000 0.00 0.00 0.00 3.46
74 75 4.453136 GCGTAAACACAGGATAAACAGGAA 59.547 41.667 0.00 0.00 0.00 3.36
75 76 3.998341 GCGTAAACACAGGATAAACAGGA 59.002 43.478 0.00 0.00 0.00 3.86
76 77 4.000988 AGCGTAAACACAGGATAAACAGG 58.999 43.478 0.00 0.00 0.00 4.00
77 78 5.607119 AAGCGTAAACACAGGATAAACAG 57.393 39.130 0.00 0.00 0.00 3.16
78 79 5.761234 AGAAAGCGTAAACACAGGATAAACA 59.239 36.000 0.00 0.00 0.00 2.83
79 80 6.077838 CAGAAAGCGTAAACACAGGATAAAC 58.922 40.000 0.00 0.00 0.00 2.01
80 81 5.761234 ACAGAAAGCGTAAACACAGGATAAA 59.239 36.000 0.00 0.00 0.00 1.40
81 82 5.302360 ACAGAAAGCGTAAACACAGGATAA 58.698 37.500 0.00 0.00 0.00 1.75
82 83 4.890088 ACAGAAAGCGTAAACACAGGATA 58.110 39.130 0.00 0.00 0.00 2.59
83 84 3.740115 ACAGAAAGCGTAAACACAGGAT 58.260 40.909 0.00 0.00 0.00 3.24
84 85 3.188159 ACAGAAAGCGTAAACACAGGA 57.812 42.857 0.00 0.00 0.00 3.86
85 86 4.056050 AGTACAGAAAGCGTAAACACAGG 58.944 43.478 0.00 0.00 0.00 4.00
86 87 4.150098 GGAGTACAGAAAGCGTAAACACAG 59.850 45.833 0.00 0.00 0.00 3.66
87 88 4.053295 GGAGTACAGAAAGCGTAAACACA 58.947 43.478 0.00 0.00 0.00 3.72
88 89 3.120782 CGGAGTACAGAAAGCGTAAACAC 59.879 47.826 0.00 0.00 0.00 3.32
89 90 3.243501 ACGGAGTACAGAAAGCGTAAACA 60.244 43.478 0.00 0.00 41.94 2.83
90 91 3.120782 CACGGAGTACAGAAAGCGTAAAC 59.879 47.826 0.00 0.00 41.61 2.01
91 92 3.311106 CACGGAGTACAGAAAGCGTAAA 58.689 45.455 0.00 0.00 41.61 2.01
92 93 2.923605 GCACGGAGTACAGAAAGCGTAA 60.924 50.000 0.00 0.00 41.61 3.18
93 94 1.401931 GCACGGAGTACAGAAAGCGTA 60.402 52.381 0.00 0.00 41.61 4.42
94 95 0.666577 GCACGGAGTACAGAAAGCGT 60.667 55.000 0.00 0.00 41.61 5.07
95 96 0.388649 AGCACGGAGTACAGAAAGCG 60.389 55.000 0.00 0.00 41.61 4.68
96 97 1.461127 CAAGCACGGAGTACAGAAAGC 59.539 52.381 0.00 0.00 41.61 3.51
97 98 2.755650 ACAAGCACGGAGTACAGAAAG 58.244 47.619 0.00 0.00 41.61 2.62
98 99 2.902705 ACAAGCACGGAGTACAGAAA 57.097 45.000 0.00 0.00 41.61 2.52
99 100 2.902705 AACAAGCACGGAGTACAGAA 57.097 45.000 0.00 0.00 41.61 3.02
100 101 2.902705 AAACAAGCACGGAGTACAGA 57.097 45.000 0.00 0.00 41.61 3.41
101 102 2.869801 TGAAAACAAGCACGGAGTACAG 59.130 45.455 0.00 0.00 41.61 2.74
102 103 2.907634 TGAAAACAAGCACGGAGTACA 58.092 42.857 0.00 0.00 41.61 2.90
103 104 4.483476 AATGAAAACAAGCACGGAGTAC 57.517 40.909 0.00 0.00 41.61 2.73
104 105 4.576873 TGAAATGAAAACAAGCACGGAGTA 59.423 37.500 0.00 0.00 41.61 2.59
106 107 3.963665 TGAAATGAAAACAAGCACGGAG 58.036 40.909 0.00 0.00 0.00 4.63
107 108 4.037327 TGATGAAATGAAAACAAGCACGGA 59.963 37.500 0.00 0.00 0.00 4.69
108 109 4.297510 TGATGAAATGAAAACAAGCACGG 58.702 39.130 0.00 0.00 0.00 4.94
109 110 5.630264 TCATGATGAAATGAAAACAAGCACG 59.370 36.000 0.00 0.00 33.63 5.34
110 111 7.329962 TCATCATGATGAAATGAAAACAAGCAC 59.670 33.333 31.46 0.00 44.14 4.40
111 112 7.379750 TCATCATGATGAAATGAAAACAAGCA 58.620 30.769 31.46 7.14 44.14 3.91
112 113 7.821595 TCATCATGATGAAATGAAAACAAGC 57.178 32.000 31.46 0.00 44.14 4.01
136 137 7.315142 CAAACATAACAGAACATAAGCATGGT 58.685 34.615 0.00 0.00 36.39 3.55
137 138 6.254157 GCAAACATAACAGAACATAAGCATGG 59.746 38.462 0.00 0.00 36.39 3.66
138 139 6.807720 TGCAAACATAACAGAACATAAGCATG 59.192 34.615 0.00 0.00 38.21 4.06
139 140 6.923012 TGCAAACATAACAGAACATAAGCAT 58.077 32.000 0.00 0.00 0.00 3.79
140 141 6.324561 TGCAAACATAACAGAACATAAGCA 57.675 33.333 0.00 0.00 0.00 3.91
141 142 7.219535 CAGATGCAAACATAACAGAACATAAGC 59.780 37.037 0.00 0.00 36.35 3.09
142 143 8.453320 TCAGATGCAAACATAACAGAACATAAG 58.547 33.333 0.00 0.00 36.35 1.73
143 144 8.334263 TCAGATGCAAACATAACAGAACATAA 57.666 30.769 0.00 0.00 36.35 1.90
144 145 7.607607 ACTCAGATGCAAACATAACAGAACATA 59.392 33.333 0.00 0.00 36.35 2.29
145 146 6.432162 ACTCAGATGCAAACATAACAGAACAT 59.568 34.615 0.00 0.00 36.35 2.71
146 147 5.764686 ACTCAGATGCAAACATAACAGAACA 59.235 36.000 0.00 0.00 36.35 3.18
147 148 6.246420 ACTCAGATGCAAACATAACAGAAC 57.754 37.500 0.00 0.00 36.35 3.01
148 149 7.161404 AGTACTCAGATGCAAACATAACAGAA 58.839 34.615 0.00 0.00 36.35 3.02
149 150 6.701340 AGTACTCAGATGCAAACATAACAGA 58.299 36.000 0.00 0.00 36.35 3.41
150 151 6.974932 AGTACTCAGATGCAAACATAACAG 57.025 37.500 0.00 0.00 36.35 3.16
151 152 9.448438 AATAAGTACTCAGATGCAAACATAACA 57.552 29.630 0.00 0.00 36.35 2.41
152 153 9.922305 GAATAAGTACTCAGATGCAAACATAAC 57.078 33.333 0.00 0.00 36.35 1.89
153 154 9.109393 GGAATAAGTACTCAGATGCAAACATAA 57.891 33.333 0.00 0.00 36.35 1.90
154 155 7.438160 CGGAATAAGTACTCAGATGCAAACATA 59.562 37.037 0.00 0.00 36.35 2.29
155 156 6.258727 CGGAATAAGTACTCAGATGCAAACAT 59.741 38.462 0.00 0.00 39.98 2.71
156 157 5.580691 CGGAATAAGTACTCAGATGCAAACA 59.419 40.000 0.00 0.00 0.00 2.83
157 158 5.502544 GCGGAATAAGTACTCAGATGCAAAC 60.503 44.000 0.00 0.00 0.00 2.93
158 159 4.570772 GCGGAATAAGTACTCAGATGCAAA 59.429 41.667 0.00 0.00 0.00 3.68
159 160 4.119862 GCGGAATAAGTACTCAGATGCAA 58.880 43.478 0.00 0.00 0.00 4.08
160 161 3.384789 AGCGGAATAAGTACTCAGATGCA 59.615 43.478 0.00 0.00 0.00 3.96
161 162 3.738282 CAGCGGAATAAGTACTCAGATGC 59.262 47.826 0.00 0.00 0.00 3.91
162 163 3.738282 GCAGCGGAATAAGTACTCAGATG 59.262 47.826 0.00 0.00 0.00 2.90
163 164 3.384789 TGCAGCGGAATAAGTACTCAGAT 59.615 43.478 0.00 0.00 0.00 2.90
164 165 2.758423 TGCAGCGGAATAAGTACTCAGA 59.242 45.455 0.00 0.00 0.00 3.27
165 166 3.165058 TGCAGCGGAATAAGTACTCAG 57.835 47.619 0.00 0.00 0.00 3.35
166 167 3.056107 ACTTGCAGCGGAATAAGTACTCA 60.056 43.478 0.00 0.00 32.05 3.41
167 168 3.522553 ACTTGCAGCGGAATAAGTACTC 58.477 45.455 0.00 0.00 32.05 2.59
168 169 3.611766 ACTTGCAGCGGAATAAGTACT 57.388 42.857 0.00 0.00 32.05 2.73
169 170 4.430908 ACTACTTGCAGCGGAATAAGTAC 58.569 43.478 0.00 0.00 35.26 2.73
170 171 4.730949 ACTACTTGCAGCGGAATAAGTA 57.269 40.909 3.08 3.08 35.26 2.24
171 172 3.611766 ACTACTTGCAGCGGAATAAGT 57.388 42.857 1.12 1.12 37.21 2.24
172 173 4.184629 AGAACTACTTGCAGCGGAATAAG 58.815 43.478 0.00 0.00 0.00 1.73
173 174 4.202245 AGAACTACTTGCAGCGGAATAA 57.798 40.909 0.00 0.00 0.00 1.40
174 175 3.887621 AGAACTACTTGCAGCGGAATA 57.112 42.857 0.00 0.00 0.00 1.75
175 176 2.770164 AGAACTACTTGCAGCGGAAT 57.230 45.000 0.00 0.00 0.00 3.01
176 177 2.413837 GAAGAACTACTTGCAGCGGAA 58.586 47.619 0.00 0.00 39.13 4.30
177 178 1.668919 CGAAGAACTACTTGCAGCGGA 60.669 52.381 0.00 0.00 39.13 5.54
178 179 0.716108 CGAAGAACTACTTGCAGCGG 59.284 55.000 0.00 0.00 39.13 5.52
179 180 0.093705 GCGAAGAACTACTTGCAGCG 59.906 55.000 0.00 0.00 39.13 5.18
180 181 1.433534 AGCGAAGAACTACTTGCAGC 58.566 50.000 0.00 0.00 39.13 5.25
181 182 3.614616 CCTTAGCGAAGAACTACTTGCAG 59.385 47.826 8.29 0.00 39.13 4.41
182 183 3.257375 TCCTTAGCGAAGAACTACTTGCA 59.743 43.478 8.29 0.00 39.13 4.08
183 184 3.846360 TCCTTAGCGAAGAACTACTTGC 58.154 45.455 8.29 0.00 39.13 4.01
184 185 6.969828 AATTCCTTAGCGAAGAACTACTTG 57.030 37.500 8.29 0.00 39.13 3.16
185 186 6.594547 GGAAATTCCTTAGCGAAGAACTACTT 59.405 38.462 8.29 0.00 36.06 2.24
186 187 6.070710 AGGAAATTCCTTAGCGAAGAACTACT 60.071 38.462 9.08 0.00 46.91 2.57
187 188 6.107343 AGGAAATTCCTTAGCGAAGAACTAC 58.893 40.000 9.08 0.00 46.91 2.73
188 189 6.295719 AGGAAATTCCTTAGCGAAGAACTA 57.704 37.500 9.08 0.00 46.91 2.24
189 190 5.167303 AGGAAATTCCTTAGCGAAGAACT 57.833 39.130 9.08 0.00 46.91 3.01
223 224 9.988350 GCGATTTTTATAAATTCTTCACTGAGA 57.012 29.630 0.00 0.00 34.16 3.27
224 225 9.226345 GGCGATTTTTATAAATTCTTCACTGAG 57.774 33.333 0.00 0.00 34.16 3.35
225 226 8.956426 AGGCGATTTTTATAAATTCTTCACTGA 58.044 29.630 0.00 0.00 34.16 3.41
233 234 9.406828 GGGTGAATAGGCGATTTTTATAAATTC 57.593 33.333 0.00 0.00 34.16 2.17
234 235 8.364894 GGGGTGAATAGGCGATTTTTATAAATT 58.635 33.333 0.00 0.00 34.16 1.82
235 236 7.039293 GGGGGTGAATAGGCGATTTTTATAAAT 60.039 37.037 0.00 0.00 36.68 1.40
236 237 6.265876 GGGGGTGAATAGGCGATTTTTATAAA 59.734 38.462 0.00 0.00 0.00 1.40
237 238 5.771165 GGGGGTGAATAGGCGATTTTTATAA 59.229 40.000 0.00 0.00 0.00 0.98
238 239 5.318630 GGGGGTGAATAGGCGATTTTTATA 58.681 41.667 0.00 0.00 0.00 0.98
239 240 4.149598 GGGGGTGAATAGGCGATTTTTAT 58.850 43.478 0.00 0.00 0.00 1.40
240 241 3.558033 GGGGGTGAATAGGCGATTTTTA 58.442 45.455 0.00 0.00 0.00 1.52
241 242 2.384828 GGGGGTGAATAGGCGATTTTT 58.615 47.619 0.00 0.00 0.00 1.94
242 243 2.067365 GGGGGTGAATAGGCGATTTT 57.933 50.000 0.00 0.00 0.00 1.82
243 244 3.821306 GGGGGTGAATAGGCGATTT 57.179 52.632 0.00 0.00 0.00 2.17
258 259 1.674962 CGTTAAGTCGACTAGAGGGGG 59.325 57.143 20.39 1.07 0.00 5.40
259 260 1.065251 GCGTTAAGTCGACTAGAGGGG 59.935 57.143 20.39 7.63 0.00 4.79
260 261 1.741706 TGCGTTAAGTCGACTAGAGGG 59.258 52.381 20.39 8.71 0.00 4.30
261 262 2.419324 AGTGCGTTAAGTCGACTAGAGG 59.581 50.000 20.39 16.03 0.00 3.69
262 263 3.743567 AGTGCGTTAAGTCGACTAGAG 57.256 47.619 20.39 11.75 0.00 2.43
263 264 3.120060 GGAAGTGCGTTAAGTCGACTAGA 60.120 47.826 20.39 7.29 0.00 2.43
264 265 3.169733 GGAAGTGCGTTAAGTCGACTAG 58.830 50.000 20.39 11.75 0.00 2.57
265 266 2.553602 TGGAAGTGCGTTAAGTCGACTA 59.446 45.455 20.39 0.04 0.00 2.59
266 267 1.338973 TGGAAGTGCGTTAAGTCGACT 59.661 47.619 13.58 13.58 0.00 4.18
267 268 1.774639 TGGAAGTGCGTTAAGTCGAC 58.225 50.000 7.70 7.70 0.00 4.20
268 269 2.029739 TCATGGAAGTGCGTTAAGTCGA 60.030 45.455 0.00 0.00 0.00 4.20
269 270 2.092211 GTCATGGAAGTGCGTTAAGTCG 59.908 50.000 0.00 0.00 0.00 4.18
270 271 2.415512 GGTCATGGAAGTGCGTTAAGTC 59.584 50.000 0.00 0.00 0.00 3.01
271 272 2.224426 TGGTCATGGAAGTGCGTTAAGT 60.224 45.455 0.00 0.00 0.00 2.24
272 273 2.416547 CTGGTCATGGAAGTGCGTTAAG 59.583 50.000 0.00 0.00 0.00 1.85
273 274 2.422597 CTGGTCATGGAAGTGCGTTAA 58.577 47.619 0.00 0.00 0.00 2.01
274 275 1.943968 GCTGGTCATGGAAGTGCGTTA 60.944 52.381 0.00 0.00 0.00 3.18
275 276 1.237285 GCTGGTCATGGAAGTGCGTT 61.237 55.000 0.00 0.00 0.00 4.84
276 277 1.672356 GCTGGTCATGGAAGTGCGT 60.672 57.895 0.00 0.00 0.00 5.24
277 278 2.743752 CGCTGGTCATGGAAGTGCG 61.744 63.158 0.00 0.00 36.19 5.34
278 279 3.044059 GCGCTGGTCATGGAAGTGC 62.044 63.158 0.00 11.25 39.93 4.40
279 280 2.743752 CGCGCTGGTCATGGAAGTG 61.744 63.158 5.56 0.00 0.00 3.16
280 281 2.434884 CGCGCTGGTCATGGAAGT 60.435 61.111 5.56 0.00 0.00 3.01
281 282 2.125552 TCGCGCTGGTCATGGAAG 60.126 61.111 5.56 0.00 0.00 3.46
282 283 2.434185 GTCGCGCTGGTCATGGAA 60.434 61.111 5.56 0.00 0.00 3.53
283 284 3.647649 CTGTCGCGCTGGTCATGGA 62.648 63.158 5.56 0.00 0.00 3.41
284 285 3.190849 CTGTCGCGCTGGTCATGG 61.191 66.667 5.56 0.00 0.00 3.66
285 286 2.433145 ACTGTCGCGCTGGTCATG 60.433 61.111 5.56 0.00 0.00 3.07
286 287 2.125912 GACTGTCGCGCTGGTCAT 60.126 61.111 5.56 0.00 0.00 3.06
287 288 2.856628 AAGACTGTCGCGCTGGTCA 61.857 57.895 20.53 0.00 0.00 4.02
288 289 2.049063 AAGACTGTCGCGCTGGTC 60.049 61.111 5.56 9.12 0.00 4.02
289 290 2.356313 CAAGACTGTCGCGCTGGT 60.356 61.111 5.56 0.00 0.00 4.00
290 291 3.114616 CCAAGACTGTCGCGCTGG 61.115 66.667 5.56 0.00 0.00 4.85
291 292 3.782244 GCCAAGACTGTCGCGCTG 61.782 66.667 5.56 3.38 0.00 5.18
292 293 3.596066 ATGCCAAGACTGTCGCGCT 62.596 57.895 5.56 0.00 0.00 5.92
293 294 2.680913 AATGCCAAGACTGTCGCGC 61.681 57.895 0.00 0.00 0.00 6.86
294 295 1.133253 CAATGCCAAGACTGTCGCG 59.867 57.895 0.00 0.00 0.00 5.87
295 296 0.874390 TTCAATGCCAAGACTGTCGC 59.126 50.000 1.52 0.68 0.00 5.19
296 297 2.096496 GGATTCAATGCCAAGACTGTCG 59.904 50.000 1.52 0.00 0.00 4.35
297 298 2.424956 GGGATTCAATGCCAAGACTGTC 59.575 50.000 2.36 0.00 40.99 3.51
298 299 2.450476 GGGATTCAATGCCAAGACTGT 58.550 47.619 2.36 0.00 40.99 3.55
299 300 1.402968 CGGGATTCAATGCCAAGACTG 59.597 52.381 8.88 0.00 41.46 3.51
300 301 1.755179 CGGGATTCAATGCCAAGACT 58.245 50.000 8.88 0.00 41.46 3.24
301 302 0.101219 GCGGGATTCAATGCCAAGAC 59.899 55.000 8.88 0.00 41.46 3.01
302 303 1.375853 CGCGGGATTCAATGCCAAGA 61.376 55.000 8.88 0.00 41.46 3.02
303 304 1.064621 CGCGGGATTCAATGCCAAG 59.935 57.895 8.88 0.00 41.46 3.61
304 305 2.413963 CCGCGGGATTCAATGCCAA 61.414 57.895 20.10 0.00 41.46 4.52
305 306 2.828095 CCGCGGGATTCAATGCCA 60.828 61.111 20.10 0.00 41.46 4.92
306 307 3.595758 CCCGCGGGATTCAATGCC 61.596 66.667 41.82 0.00 37.50 4.40
307 308 2.515991 TCCCGCGGGATTCAATGC 60.516 61.111 42.66 0.00 39.76 3.56
320 321 4.271816 CTCATCGCCTCGGTCCCG 62.272 72.222 0.00 0.00 41.35 5.14
321 322 3.917760 CCTCATCGCCTCGGTCCC 61.918 72.222 0.00 0.00 0.00 4.46
322 323 2.833582 TCCTCATCGCCTCGGTCC 60.834 66.667 0.00 0.00 0.00 4.46
323 324 2.413765 GTCCTCATCGCCTCGGTC 59.586 66.667 0.00 0.00 0.00 4.79
324 325 3.518998 CGTCCTCATCGCCTCGGT 61.519 66.667 0.00 0.00 0.00 4.69
325 326 3.209812 TCGTCCTCATCGCCTCGG 61.210 66.667 0.00 0.00 0.00 4.63
326 327 2.024871 GTCGTCCTCATCGCCTCG 59.975 66.667 0.00 0.00 0.00 4.63
327 328 1.989966 TTCGTCGTCCTCATCGCCTC 61.990 60.000 0.00 0.00 0.00 4.70
328 329 1.994507 CTTCGTCGTCCTCATCGCCT 61.995 60.000 0.00 0.00 0.00 5.52
329 330 1.586564 CTTCGTCGTCCTCATCGCC 60.587 63.158 0.00 0.00 0.00 5.54
330 331 1.586564 CCTTCGTCGTCCTCATCGC 60.587 63.158 0.00 0.00 0.00 4.58
331 332 1.586564 GCCTTCGTCGTCCTCATCG 60.587 63.158 0.00 0.00 0.00 3.84
332 333 1.586564 CGCCTTCGTCGTCCTCATC 60.587 63.158 0.00 0.00 0.00 2.92
333 334 2.490217 CGCCTTCGTCGTCCTCAT 59.510 61.111 0.00 0.00 0.00 2.90
334 335 3.744719 CCGCCTTCGTCGTCCTCA 61.745 66.667 0.00 0.00 0.00 3.86
341 342 4.415332 TGACTCGCCGCCTTCGTC 62.415 66.667 0.00 0.00 0.00 4.20
342 343 4.719369 GTGACTCGCCGCCTTCGT 62.719 66.667 0.00 0.00 0.00 3.85
343 344 4.421479 AGTGACTCGCCGCCTTCG 62.421 66.667 0.00 0.00 0.00 3.79
344 345 2.811317 CAGTGACTCGCCGCCTTC 60.811 66.667 0.00 0.00 0.00 3.46
345 346 3.303135 TCAGTGACTCGCCGCCTT 61.303 61.111 0.00 0.00 0.00 4.35
346 347 4.057428 GTCAGTGACTCGCCGCCT 62.057 66.667 16.26 0.00 0.00 5.52
347 348 4.057428 AGTCAGTGACTCGCCGCC 62.057 66.667 20.34 0.00 38.71 6.13
354 355 3.374402 CCCGCCGAGTCAGTGACT 61.374 66.667 25.75 25.75 46.42 3.41
366 367 4.678743 AAAAGGAGTGGGCCCGCC 62.679 66.667 32.01 24.36 0.00 6.13
367 368 3.062466 GAAAAGGAGTGGGCCCGC 61.062 66.667 28.88 28.88 0.00 6.13
368 369 2.746277 CGAAAAGGAGTGGGCCCG 60.746 66.667 19.37 0.00 0.00 6.13
369 370 3.062466 GCGAAAAGGAGTGGGCCC 61.062 66.667 17.59 17.59 0.00 5.80
370 371 3.431725 CGCGAAAAGGAGTGGGCC 61.432 66.667 0.00 0.00 0.00 5.80
371 372 4.103103 GCGCGAAAAGGAGTGGGC 62.103 66.667 12.10 0.00 0.00 5.36
372 373 3.431725 GGCGCGAAAAGGAGTGGG 61.432 66.667 12.10 0.00 0.00 4.61
373 374 1.791103 TTTGGCGCGAAAAGGAGTGG 61.791 55.000 15.55 0.00 0.00 4.00
374 375 0.030101 TTTTGGCGCGAAAAGGAGTG 59.970 50.000 23.88 0.00 0.00 3.51
375 376 0.741915 TTTTTGGCGCGAAAAGGAGT 59.258 45.000 25.65 0.00 0.00 3.85
376 377 1.128513 GTTTTTGGCGCGAAAAGGAG 58.871 50.000 25.65 0.00 28.76 3.69
377 378 0.592754 CGTTTTTGGCGCGAAAAGGA 60.593 50.000 25.65 13.03 35.73 3.36
378 379 0.868177 ACGTTTTTGGCGCGAAAAGG 60.868 50.000 25.65 25.48 38.09 3.11
379 380 0.917939 AACGTTTTTGGCGCGAAAAG 59.082 45.000 25.65 19.04 28.76 2.27
380 381 1.320852 GAAACGTTTTTGGCGCGAAAA 59.679 42.857 23.88 23.88 0.00 2.29
381 382 0.915227 GAAACGTTTTTGGCGCGAAA 59.085 45.000 15.89 13.91 0.00 3.46
382 383 0.866483 GGAAACGTTTTTGGCGCGAA 60.866 50.000 15.89 0.00 0.00 4.70
383 384 1.298488 GGAAACGTTTTTGGCGCGA 60.298 52.632 15.89 0.00 0.00 5.87
384 385 2.297195 GGGAAACGTTTTTGGCGCG 61.297 57.895 15.89 0.00 0.00 6.86
385 386 1.952133 GGGGAAACGTTTTTGGCGC 60.952 57.895 15.89 10.16 0.00 6.53
386 387 1.300311 GGGGGAAACGTTTTTGGCG 60.300 57.895 15.89 0.00 0.00 5.69
387 388 1.300311 CGGGGGAAACGTTTTTGGC 60.300 57.895 15.89 1.72 0.00 4.52
388 389 1.364536 CCGGGGGAAACGTTTTTGG 59.635 57.895 15.89 8.96 0.00 3.28
389 390 1.300311 GCCGGGGGAAACGTTTTTG 60.300 57.895 15.89 3.75 0.00 2.44
390 391 2.847754 CGCCGGGGGAAACGTTTTT 61.848 57.895 15.89 0.00 0.00 1.94
391 392 3.289062 CGCCGGGGGAAACGTTTT 61.289 61.111 15.89 0.00 0.00 2.43
392 393 4.253239 TCGCCGGGGGAAACGTTT 62.253 61.111 19.63 14.57 0.00 3.60
393 394 4.994471 GTCGCCGGGGGAAACGTT 62.994 66.667 19.63 0.00 0.00 3.99
445 446 3.336715 GATTTTGGCACCGGCGGAC 62.337 63.158 35.78 23.45 42.47 4.79
446 447 3.059386 GATTTTGGCACCGGCGGA 61.059 61.111 35.78 8.64 42.47 5.54
447 448 4.474846 CGATTTTGGCACCGGCGG 62.475 66.667 27.06 27.06 42.47 6.13
448 449 4.474846 CCGATTTTGGCACCGGCG 62.475 66.667 0.00 0.00 42.47 6.46
456 457 2.882132 GGTTCGGGCCGATTTTGG 59.118 61.111 31.59 0.00 35.23 3.28
468 469 1.083015 CACAGTTTTCGCCGGTTCG 60.083 57.895 1.90 0.00 0.00 3.95
469 470 1.370051 GCACAGTTTTCGCCGGTTC 60.370 57.895 1.90 0.00 0.00 3.62
470 471 1.381165 AAGCACAGTTTTCGCCGGTT 61.381 50.000 1.90 0.00 0.00 4.44
471 472 1.381165 AAAGCACAGTTTTCGCCGGT 61.381 50.000 1.90 0.00 0.00 5.28
472 473 0.248866 AAAAGCACAGTTTTCGCCGG 60.249 50.000 0.00 0.00 0.00 6.13
473 474 0.845768 CAAAAGCACAGTTTTCGCCG 59.154 50.000 0.00 0.00 0.00 6.46
474 475 1.202359 TCCAAAAGCACAGTTTTCGCC 60.202 47.619 0.00 0.00 0.00 5.54
475 476 2.119457 CTCCAAAAGCACAGTTTTCGC 58.881 47.619 0.00 0.00 0.00 4.70
476 477 2.731217 CCTCCAAAAGCACAGTTTTCG 58.269 47.619 0.00 0.00 0.00 3.46
477 478 2.159114 TGCCTCCAAAAGCACAGTTTTC 60.159 45.455 0.00 0.00 33.08 2.29
478 479 1.830477 TGCCTCCAAAAGCACAGTTTT 59.170 42.857 0.00 0.00 33.08 2.43
479 480 1.484038 TGCCTCCAAAAGCACAGTTT 58.516 45.000 0.00 0.00 33.08 2.66
480 481 1.342174 CATGCCTCCAAAAGCACAGTT 59.658 47.619 0.00 0.00 42.84 3.16
481 482 0.963962 CATGCCTCCAAAAGCACAGT 59.036 50.000 0.00 0.00 42.84 3.55
482 483 1.068055 GTCATGCCTCCAAAAGCACAG 60.068 52.381 0.00 0.00 42.84 3.66
483 484 0.961019 GTCATGCCTCCAAAAGCACA 59.039 50.000 0.00 0.00 42.84 4.57
484 485 1.068055 CAGTCATGCCTCCAAAAGCAC 60.068 52.381 0.00 0.00 42.84 4.40
485 486 1.250328 CAGTCATGCCTCCAAAAGCA 58.750 50.000 0.00 0.00 44.45 3.91
486 487 0.529378 CCAGTCATGCCTCCAAAAGC 59.471 55.000 0.00 0.00 0.00 3.51
487 488 1.815003 GTCCAGTCATGCCTCCAAAAG 59.185 52.381 0.00 0.00 0.00 2.27
488 489 1.547675 GGTCCAGTCATGCCTCCAAAA 60.548 52.381 0.00 0.00 0.00 2.44
489 490 0.038166 GGTCCAGTCATGCCTCCAAA 59.962 55.000 0.00 0.00 0.00 3.28
490 491 1.685224 GGTCCAGTCATGCCTCCAA 59.315 57.895 0.00 0.00 0.00 3.53
491 492 2.659063 CGGTCCAGTCATGCCTCCA 61.659 63.158 0.00 0.00 0.00 3.86
492 493 1.899437 TTCGGTCCAGTCATGCCTCC 61.899 60.000 0.00 0.00 0.00 4.30
493 494 0.741221 GTTCGGTCCAGTCATGCCTC 60.741 60.000 0.00 0.00 0.00 4.70
494 495 1.296715 GTTCGGTCCAGTCATGCCT 59.703 57.895 0.00 0.00 0.00 4.75
495 496 1.745489 GGTTCGGTCCAGTCATGCC 60.745 63.158 0.00 0.00 0.00 4.40
496 497 2.100631 CGGTTCGGTCCAGTCATGC 61.101 63.158 0.00 0.00 0.00 4.06
497 498 1.447838 CCGGTTCGGTCCAGTCATG 60.448 63.158 0.00 0.00 42.73 3.07
498 499 2.978824 CCGGTTCGGTCCAGTCAT 59.021 61.111 0.00 0.00 42.73 3.06
508 509 1.083015 CTTTTGCGTCACCGGTTCG 60.083 57.895 20.31 20.31 33.68 3.95
509 510 1.281656 CCTTTTGCGTCACCGGTTC 59.718 57.895 2.97 0.00 33.68 3.62
510 511 2.190841 CCCTTTTGCGTCACCGGTT 61.191 57.895 2.97 0.00 33.68 4.44
511 512 2.593436 CCCTTTTGCGTCACCGGT 60.593 61.111 0.00 0.00 33.68 5.28
512 513 4.038080 GCCCTTTTGCGTCACCGG 62.038 66.667 0.00 0.00 33.68 5.28
513 514 4.038080 GGCCCTTTTGCGTCACCG 62.038 66.667 0.00 0.00 37.07 4.94
514 515 1.744320 AAAGGCCCTTTTGCGTCACC 61.744 55.000 1.93 0.00 28.27 4.02
515 516 0.597377 CAAAGGCCCTTTTGCGTCAC 60.597 55.000 5.84 0.00 30.60 3.67
516 517 1.739049 CAAAGGCCCTTTTGCGTCA 59.261 52.632 5.84 0.00 30.60 4.35
517 518 1.006220 CCAAAGGCCCTTTTGCGTC 60.006 57.895 5.84 0.00 36.86 5.19
518 519 1.456705 TCCAAAGGCCCTTTTGCGT 60.457 52.632 5.84 0.00 36.86 5.24
519 520 1.290009 CTCCAAAGGCCCTTTTGCG 59.710 57.895 5.84 0.00 36.86 4.85
520 521 1.673477 CCTCCAAAGGCCCTTTTGC 59.327 57.895 5.84 0.00 36.86 3.68
521 522 1.830587 GCCCTCCAAAGGCCCTTTTG 61.831 60.000 5.84 3.10 45.16 2.44
522 523 1.536418 GCCCTCCAAAGGCCCTTTT 60.536 57.895 5.84 0.00 45.16 2.27
523 524 2.120496 GCCCTCCAAAGGCCCTTT 59.880 61.111 1.93 1.93 45.16 3.11
529 530 1.259840 CCCAACATGCCCTCCAAAGG 61.260 60.000 0.00 0.00 42.95 3.11
530 531 1.259840 CCCCAACATGCCCTCCAAAG 61.260 60.000 0.00 0.00 0.00 2.77
531 532 1.229145 CCCCAACATGCCCTCCAAA 60.229 57.895 0.00 0.00 0.00 3.28
532 533 2.444696 CCCCAACATGCCCTCCAA 59.555 61.111 0.00 0.00 0.00 3.53
533 534 3.671410 CCCCCAACATGCCCTCCA 61.671 66.667 0.00 0.00 0.00 3.86
534 535 3.672503 ACCCCCAACATGCCCTCC 61.673 66.667 0.00 0.00 0.00 4.30
535 536 2.362889 CACCCCCAACATGCCCTC 60.363 66.667 0.00 0.00 0.00 4.30
536 537 4.702274 GCACCCCCAACATGCCCT 62.702 66.667 0.00 0.00 33.06 5.19
547 548 4.864334 CATCTCCAGCCGCACCCC 62.864 72.222 0.00 0.00 0.00 4.95
549 550 4.479993 AGCATCTCCAGCCGCACC 62.480 66.667 0.00 0.00 0.00 5.01
550 551 2.894387 GAGCATCTCCAGCCGCAC 60.894 66.667 0.00 0.00 0.00 5.34
561 562 3.057596 CGTCTGAGGAGGATAAGAGCATC 60.058 52.174 0.00 0.00 0.00 3.91
562 563 2.890311 CGTCTGAGGAGGATAAGAGCAT 59.110 50.000 0.00 0.00 0.00 3.79
563 564 2.302260 CGTCTGAGGAGGATAAGAGCA 58.698 52.381 0.00 0.00 0.00 4.26
564 565 1.000717 GCGTCTGAGGAGGATAAGAGC 60.001 57.143 0.82 0.00 0.00 4.09
565 566 2.582052 AGCGTCTGAGGAGGATAAGAG 58.418 52.381 0.82 0.00 0.00 2.85
566 567 2.738587 AGCGTCTGAGGAGGATAAGA 57.261 50.000 0.82 0.00 0.00 2.10
567 568 4.396790 GGTATAGCGTCTGAGGAGGATAAG 59.603 50.000 0.82 0.00 33.10 1.73
568 569 4.333690 GGTATAGCGTCTGAGGAGGATAA 58.666 47.826 0.82 0.00 33.10 1.75
569 570 3.619242 CGGTATAGCGTCTGAGGAGGATA 60.619 52.174 15.98 0.00 33.73 2.59
570 571 2.797786 GGTATAGCGTCTGAGGAGGAT 58.202 52.381 0.82 0.00 0.00 3.24
571 572 1.542767 CGGTATAGCGTCTGAGGAGGA 60.543 57.143 15.98 0.00 0.00 3.71
572 573 0.875728 CGGTATAGCGTCTGAGGAGG 59.124 60.000 15.98 0.00 0.00 4.30
573 574 1.801771 CTCGGTATAGCGTCTGAGGAG 59.198 57.143 22.44 8.19 34.52 3.69
574 575 1.880271 CTCGGTATAGCGTCTGAGGA 58.120 55.000 22.44 2.11 34.52 3.71
575 576 0.875728 CCTCGGTATAGCGTCTGAGG 59.124 60.000 22.44 17.55 46.40 3.86
576 577 1.880271 TCCTCGGTATAGCGTCTGAG 58.120 55.000 22.44 12.91 36.97 3.35
577 578 2.552743 CAATCCTCGGTATAGCGTCTGA 59.447 50.000 22.44 16.90 0.00 3.27
578 579 2.351835 CCAATCCTCGGTATAGCGTCTG 60.352 54.545 22.44 13.91 0.00 3.51
579 580 1.887198 CCAATCCTCGGTATAGCGTCT 59.113 52.381 22.44 4.85 0.00 4.18
580 581 1.612463 ACCAATCCTCGGTATAGCGTC 59.388 52.381 22.44 0.00 34.02 5.19
581 582 1.700955 ACCAATCCTCGGTATAGCGT 58.299 50.000 22.44 1.78 34.02 5.07
582 583 2.814280 AACCAATCCTCGGTATAGCG 57.186 50.000 17.98 17.98 34.99 4.26
583 584 7.609056 TCTAAATAACCAATCCTCGGTATAGC 58.391 38.462 0.00 0.00 34.99 2.97
584 585 9.021807 TCTCTAAATAACCAATCCTCGGTATAG 57.978 37.037 0.00 0.00 34.99 1.31
585 586 8.945195 TCTCTAAATAACCAATCCTCGGTATA 57.055 34.615 0.00 0.00 34.99 1.47
586 587 7.850935 TCTCTAAATAACCAATCCTCGGTAT 57.149 36.000 0.00 0.00 34.99 2.73
587 588 7.256190 CCATCTCTAAATAACCAATCCTCGGTA 60.256 40.741 0.00 0.00 34.99 4.02
588 589 6.464465 CCATCTCTAAATAACCAATCCTCGGT 60.464 42.308 0.00 0.00 38.85 4.69
589 590 5.934625 CCATCTCTAAATAACCAATCCTCGG 59.065 44.000 0.00 0.00 0.00 4.63
590 591 5.409826 GCCATCTCTAAATAACCAATCCTCG 59.590 44.000 0.00 0.00 0.00 4.63
591 592 5.707764 GGCCATCTCTAAATAACCAATCCTC 59.292 44.000 0.00 0.00 0.00 3.71
592 593 5.373854 AGGCCATCTCTAAATAACCAATCCT 59.626 40.000 5.01 0.00 0.00 3.24
593 594 5.635120 AGGCCATCTCTAAATAACCAATCC 58.365 41.667 5.01 0.00 0.00 3.01
594 595 7.094592 GCTTAGGCCATCTCTAAATAACCAATC 60.095 40.741 5.01 0.00 0.00 2.67
595 596 6.717084 GCTTAGGCCATCTCTAAATAACCAAT 59.283 38.462 5.01 0.00 0.00 3.16
596 597 6.062095 GCTTAGGCCATCTCTAAATAACCAA 58.938 40.000 5.01 0.00 0.00 3.67
597 598 5.369699 AGCTTAGGCCATCTCTAAATAACCA 59.630 40.000 5.01 0.00 39.73 3.67
598 599 5.703130 CAGCTTAGGCCATCTCTAAATAACC 59.297 44.000 5.01 0.00 39.73 2.85
599 600 5.180304 GCAGCTTAGGCCATCTCTAAATAAC 59.820 44.000 5.01 0.00 39.73 1.89
600 601 5.163205 TGCAGCTTAGGCCATCTCTAAATAA 60.163 40.000 5.01 0.00 39.73 1.40
601 602 4.347876 TGCAGCTTAGGCCATCTCTAAATA 59.652 41.667 5.01 0.00 39.73 1.40
602 603 3.137176 TGCAGCTTAGGCCATCTCTAAAT 59.863 43.478 5.01 0.00 39.73 1.40
603 604 2.505407 TGCAGCTTAGGCCATCTCTAAA 59.495 45.455 5.01 0.00 39.73 1.85
604 605 2.118679 TGCAGCTTAGGCCATCTCTAA 58.881 47.619 5.01 0.00 39.73 2.10
605 606 1.793414 TGCAGCTTAGGCCATCTCTA 58.207 50.000 5.01 0.00 39.73 2.43
606 607 0.914644 TTGCAGCTTAGGCCATCTCT 59.085 50.000 5.01 0.00 39.73 3.10
607 608 1.020437 GTTGCAGCTTAGGCCATCTC 58.980 55.000 5.01 0.00 39.73 2.75
608 609 0.394899 GGTTGCAGCTTAGGCCATCT 60.395 55.000 5.01 0.00 39.73 2.90
609 610 0.394899 AGGTTGCAGCTTAGGCCATC 60.395 55.000 5.01 0.00 39.73 3.51
610 611 0.918983 TAGGTTGCAGCTTAGGCCAT 59.081 50.000 5.01 0.00 39.73 4.40
611 612 0.918983 ATAGGTTGCAGCTTAGGCCA 59.081 50.000 5.01 0.00 39.73 5.36
612 613 1.598882 GATAGGTTGCAGCTTAGGCC 58.401 55.000 0.00 0.00 39.73 5.19
613 614 1.221414 CGATAGGTTGCAGCTTAGGC 58.779 55.000 0.00 0.00 39.06 3.93
614 615 1.221414 GCGATAGGTTGCAGCTTAGG 58.779 55.000 0.00 0.00 34.69 2.69
654 656 7.831193 TCTTCTTCTTCAAAAAGGATGATAGGG 59.169 37.037 0.00 0.00 33.03 3.53
670 672 8.722394 ACGGACAAGATATTTTTCTTCTTCTTC 58.278 33.333 0.00 0.00 33.69 2.87
671 673 8.622948 ACGGACAAGATATTTTTCTTCTTCTT 57.377 30.769 0.00 0.00 33.69 2.52
672 674 7.334671 GGACGGACAAGATATTTTTCTTCTTCT 59.665 37.037 0.00 0.00 33.69 2.85
673 675 7.334671 AGGACGGACAAGATATTTTTCTTCTTC 59.665 37.037 0.00 0.00 33.69 2.87
675 680 6.595716 CAGGACGGACAAGATATTTTTCTTCT 59.404 38.462 0.00 0.00 33.69 2.85
679 684 4.394920 TGCAGGACGGACAAGATATTTTTC 59.605 41.667 0.00 0.00 0.00 2.29
680 685 4.331968 TGCAGGACGGACAAGATATTTTT 58.668 39.130 0.00 0.00 0.00 1.94
684 689 2.501723 AGTTGCAGGACGGACAAGATAT 59.498 45.455 0.00 0.00 0.00 1.63
685 690 1.899814 AGTTGCAGGACGGACAAGATA 59.100 47.619 0.00 0.00 0.00 1.98
688 693 1.429463 GTAGTTGCAGGACGGACAAG 58.571 55.000 0.00 0.00 0.00 3.16
697 702 0.951558 GTGGTTGTGGTAGTTGCAGG 59.048 55.000 0.00 0.00 0.00 4.85
702 707 2.488347 GGTGGATGTGGTTGTGGTAGTT 60.488 50.000 0.00 0.00 0.00 2.24
718 723 2.642254 CCGACTGGCGTTAGGTGGA 61.642 63.158 0.71 0.00 38.67 4.02
746 765 1.178276 TTCTTGGGCGTTTGTGTGTT 58.822 45.000 0.00 0.00 0.00 3.32
780 799 3.795924 ATGGGGGAGGAGGAGGGG 61.796 72.222 0.00 0.00 0.00 4.79
781 800 2.122189 GATGGGGGAGGAGGAGGG 60.122 72.222 0.00 0.00 0.00 4.30
812 843 6.009589 TGTGGAGATGTATGGTTGATTTTGT 58.990 36.000 0.00 0.00 0.00 2.83
854 885 0.523519 TCACACTGCGTCAGCTAGAG 59.476 55.000 0.00 0.00 45.42 2.43
855 886 1.135286 CATCACACTGCGTCAGCTAGA 60.135 52.381 0.00 3.45 45.42 2.43
870 901 0.159345 CGCAAGCGCAAAAACATCAC 59.841 50.000 11.47 0.00 38.40 3.06
884 915 3.374745 GGTGATTGATTAATGGCGCAAG 58.625 45.455 10.83 0.00 43.44 4.01
885 916 2.100584 GGGTGATTGATTAATGGCGCAA 59.899 45.455 10.83 0.00 0.00 4.85
886 917 1.680735 GGGTGATTGATTAATGGCGCA 59.319 47.619 10.83 0.00 0.00 6.09
904 935 2.581354 CTTGAGCTCGGGACTGGG 59.419 66.667 9.64 0.00 0.00 4.45
944 1004 4.724602 TCTGAGCTGGACACGCGC 62.725 66.667 5.73 0.00 0.00 6.86
945 1005 2.505777 CTCTGAGCTGGACACGCG 60.506 66.667 3.53 3.53 0.00 6.01
946 1006 2.813042 GCTCTGAGCTGGACACGC 60.813 66.667 21.93 0.00 38.45 5.34
948 1008 2.125753 CGGCTCTGAGCTGGACAC 60.126 66.667 27.08 10.40 43.75 3.67
956 1017 5.336849 CCCTCCTATAAATAACGGCTCTGAG 60.337 48.000 0.00 0.00 0.00 3.35
990 1051 3.869272 GAAGACATGGCTGCGCGG 61.869 66.667 13.18 13.18 0.00 6.46
991 1052 2.301902 GAAGAAGACATGGCTGCGCG 62.302 60.000 0.00 0.00 0.00 6.86
992 1053 1.427020 GAAGAAGACATGGCTGCGC 59.573 57.895 0.00 0.00 0.00 6.09
994 1055 1.034292 GGGGAAGAAGACATGGCTGC 61.034 60.000 0.00 0.00 0.00 5.25
995 1056 0.394899 GGGGGAAGAAGACATGGCTG 60.395 60.000 0.00 0.00 0.00 4.85
996 1057 0.846427 TGGGGGAAGAAGACATGGCT 60.846 55.000 0.00 0.00 0.00 4.75
997 1058 0.039618 TTGGGGGAAGAAGACATGGC 59.960 55.000 0.00 0.00 0.00 4.40
999 1060 3.217626 GCTATTGGGGGAAGAAGACATG 58.782 50.000 0.00 0.00 0.00 3.21
1000 1061 2.158755 CGCTATTGGGGGAAGAAGACAT 60.159 50.000 0.00 0.00 0.00 3.06
1001 1062 1.209504 CGCTATTGGGGGAAGAAGACA 59.790 52.381 0.00 0.00 0.00 3.41
1002 1063 1.485066 TCGCTATTGGGGGAAGAAGAC 59.515 52.381 0.00 0.00 0.00 3.01
1005 1066 0.177141 CGTCGCTATTGGGGGAAGAA 59.823 55.000 0.00 0.00 31.69 2.52
1009 1070 1.259142 TTGTCGTCGCTATTGGGGGA 61.259 55.000 0.00 0.00 0.00 4.81
1028 1089 2.668550 GCGGGTTCTTCTTGCCGT 60.669 61.111 0.00 0.00 0.00 5.68
1410 1474 3.584250 GAGCACGACGTCGACGGAA 62.584 63.158 41.52 0.00 44.95 4.30
1459 1523 2.973899 CACCAGGACCTCCGACTG 59.026 66.667 0.00 0.00 42.08 3.51
1460 1524 2.997897 GCACCAGGACCTCCGACT 60.998 66.667 0.00 0.00 42.08 4.18
1923 1990 0.900647 AGTCGGTGGAGAAGACCTGG 60.901 60.000 0.00 0.00 35.65 4.45
2117 5063 1.190178 TGCTCTGCTCTCCTCTGCAA 61.190 55.000 0.00 0.00 38.81 4.08
2125 5071 3.092780 GCTCCCCTGCTCTGCTCTC 62.093 68.421 0.00 0.00 0.00 3.20
2166 5124 0.554305 AAATAATCCCCACCCGGACC 59.446 55.000 0.73 0.00 33.77 4.46
2193 5151 2.241176 TCCATGGTGTCCCAGATTTACC 59.759 50.000 12.58 0.00 46.15 2.85
2196 5154 3.763557 AATCCATGGTGTCCCAGATTT 57.236 42.857 12.58 0.00 46.15 2.17
2200 5158 3.225104 CCATTAATCCATGGTGTCCCAG 58.775 50.000 12.58 0.00 46.15 4.45
2210 5168 5.652014 ACGAACATCAACACCATTAATCCAT 59.348 36.000 0.00 0.00 0.00 3.41
2236 5194 6.089016 CCACTAGTACAGTACAAAACATCACG 59.911 42.308 13.37 0.00 34.98 4.35
2248 5206 3.013188 ACCCCCAATCCACTAGTACAGTA 59.987 47.826 0.00 0.00 34.98 2.74
2249 5207 2.225805 ACCCCCAATCCACTAGTACAGT 60.226 50.000 0.00 0.00 38.32 3.55
2250 5208 2.434702 GACCCCCAATCCACTAGTACAG 59.565 54.545 0.00 0.00 0.00 2.74
2302 5260 6.146021 CACATCAAACAGTTTTGCTTATTCCC 59.854 38.462 0.00 0.00 41.78 3.97
2375 5334 7.451877 TGGAGGAATTAACTATCCTACTAGCAG 59.548 40.741 14.16 0.00 45.50 4.24
2376 5335 7.302948 TGGAGGAATTAACTATCCTACTAGCA 58.697 38.462 14.16 0.00 45.50 3.49
2377 5336 7.778185 TGGAGGAATTAACTATCCTACTAGC 57.222 40.000 14.16 1.36 45.50 3.42
2428 5387 9.136323 GAGTTAATGAAAACCATCCTGGATAAT 57.864 33.333 9.27 0.00 40.96 1.28
2429 5388 8.336235 AGAGTTAATGAAAACCATCCTGGATAA 58.664 33.333 9.27 0.00 40.96 1.75
2449 5566 8.817092 TTCCCTTTTTCTTTTTCTGAGAGTTA 57.183 30.769 0.00 0.00 0.00 2.24
2502 5626 0.179197 CAGCAGCAGAGAACATTGCG 60.179 55.000 0.00 0.00 44.80 4.85
2557 5681 2.190161 TCGAATAAATGCTCGACCGTG 58.810 47.619 0.00 0.00 39.07 4.94
2596 5720 7.898014 ATAGACCTGATGTGATGTTAGTGTA 57.102 36.000 0.00 0.00 0.00 2.90
2755 5888 2.229543 TGCAAGCTGTATTTTCAGGCAG 59.770 45.455 0.00 0.00 36.12 4.85
2826 5959 1.878069 CTTCATCGACGATGCCGCA 60.878 57.895 28.87 12.26 39.63 5.69
2858 5995 2.100631 GGTCTTCCACGCACCATCG 61.101 63.158 0.00 0.00 0.00 3.84
2861 5998 3.164977 TGGGTCTTCCACGCACCA 61.165 61.111 0.00 0.00 42.82 4.17
2870 6007 4.141688 CCTTCCCTACACTAATGGGTCTTC 60.142 50.000 0.00 0.00 41.58 2.87
2879 6016 0.979187 CCCCGCCTTCCCTACACTAA 60.979 60.000 0.00 0.00 0.00 2.24
2952 6161 1.212751 CTCGTGTCACTCGCCATCA 59.787 57.895 0.65 0.00 0.00 3.07
2967 6176 2.169832 TTGCTTCAACTTCTCCCTCG 57.830 50.000 0.00 0.00 0.00 4.63
2971 6180 4.322567 ACTCAGATTGCTTCAACTTCTCC 58.677 43.478 0.00 0.00 0.00 3.71
2972 6181 5.938438 AACTCAGATTGCTTCAACTTCTC 57.062 39.130 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.