Multiple sequence alignment - TraesCS5D01G331800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G331800 chr5D 100.000 3455 0 0 1 3455 422760907 422764361 0.000000e+00 6381.0
1 TraesCS5D01G331800 chr5D 88.202 178 19 2 2966 3143 351556028 351556203 9.710000e-51 211.0
2 TraesCS5D01G331800 chr5D 85.876 177 16 5 2146 2322 369290807 369290640 2.740000e-41 180.0
3 TraesCS5D01G331800 chr5D 91.597 119 10 0 1898 2016 422762744 422762862 7.670000e-37 165.0
4 TraesCS5D01G331800 chr5D 91.597 119 10 0 1838 1956 422762804 422762922 7.670000e-37 165.0
5 TraesCS5D01G331800 chr5D 84.892 139 20 1 2826 2964 422944105 422944242 4.650000e-29 139.0
6 TraesCS5D01G331800 chr5B 91.409 2037 114 28 673 2695 510378646 510380635 0.000000e+00 2736.0
7 TraesCS5D01G331800 chr5B 91.045 268 24 0 1 268 510378068 510378335 2.530000e-96 363.0
8 TraesCS5D01G331800 chr5B 85.333 225 30 2 3183 3407 510382421 510382642 2.680000e-56 230.0
9 TraesCS5D01G331800 chr5B 93.333 150 10 0 316 465 510378438 510378587 4.490000e-54 222.0
10 TraesCS5D01G331800 chr5B 89.881 168 15 2 2972 3139 491710537 491710372 7.510000e-52 215.0
11 TraesCS5D01G331800 chr5B 91.597 119 10 0 1836 1954 510379855 510379973 7.670000e-37 165.0
12 TraesCS5D01G331800 chr5B 84.892 139 20 1 2826 2964 510536973 510537110 4.650000e-29 139.0
13 TraesCS5D01G331800 chr5B 100.000 35 0 0 2843 2877 510381851 510381885 8.000000e-07 65.8
14 TraesCS5D01G331800 chr5B 94.444 36 2 0 604 639 590457284 590457249 4.820000e-04 56.5
15 TraesCS5D01G331800 chr5A 90.909 1177 51 24 1614 2769 536267245 536268386 0.000000e+00 1530.0
16 TraesCS5D01G331800 chr5A 92.047 943 44 8 673 1593 536266324 536267257 0.000000e+00 1297.0
17 TraesCS5D01G331800 chr5A 90.948 464 25 2 3 465 536265684 536266131 2.950000e-170 608.0
18 TraesCS5D01G331800 chr5A 88.000 225 24 1 3183 3407 536275459 536275680 2.640000e-66 263.0
19 TraesCS5D01G331800 chr5A 95.312 128 6 0 2843 2970 536275078 536275205 1.630000e-48 204.0
20 TraesCS5D01G331800 chr5A 89.313 131 14 0 1898 2028 536267469 536267599 7.670000e-37 165.0
21 TraesCS5D01G331800 chr5A 90.756 119 11 0 1838 1956 536267529 536267647 3.570000e-35 159.0
22 TraesCS5D01G331800 chr5A 95.000 100 5 0 2863 2962 536274340 536274439 1.280000e-34 158.0
23 TraesCS5D01G331800 chr5A 82.734 139 23 1 2826 2964 536358800 536358937 4.680000e-24 122.0
24 TraesCS5D01G331800 chr5A 97.561 41 1 0 3143 3183 536274460 536274500 1.720000e-08 71.3
25 TraesCS5D01G331800 chr1A 89.773 176 16 2 2965 3140 100359851 100360024 1.250000e-54 224.0
26 TraesCS5D01G331800 chr7B 89.266 177 17 2 2966 3142 650609102 650608928 1.610000e-53 220.0
27 TraesCS5D01G331800 chr7B 100.000 28 0 0 608 635 453626328 453626355 6.000000e-03 52.8
28 TraesCS5D01G331800 chr6B 89.881 168 15 2 2972 3139 119526974 119526809 7.510000e-52 215.0
29 TraesCS5D01G331800 chr6B 90.303 165 14 2 2975 3139 408626098 408626260 7.510000e-52 215.0
30 TraesCS5D01G331800 chr6B 88.398 181 15 6 2966 3143 290179009 290179186 2.700000e-51 213.0
31 TraesCS5D01G331800 chr3B 88.202 178 18 3 2964 3141 428100906 428100732 3.490000e-50 209.0
32 TraesCS5D01G331800 chr4D 87.500 184 17 6 2958 3139 136489707 136489528 1.260000e-49 207.0
33 TraesCS5D01G331800 chr4B 100.000 30 0 0 608 637 403622996 403623025 4.820000e-04 56.5
34 TraesCS5D01G331800 chr6D 96.970 33 0 1 608 640 363008876 363008845 2.000000e-03 54.7
35 TraesCS5D01G331800 chr4A 96.970 33 0 1 604 635 669583244 669583276 2.000000e-03 54.7
36 TraesCS5D01G331800 chr1B 83.607 61 7 3 576 635 361149051 361149109 2.000000e-03 54.7
37 TraesCS5D01G331800 chr7A 100.000 28 0 0 608 635 643423190 643423163 6.000000e-03 52.8
38 TraesCS5D01G331800 chr2B 100.000 28 0 0 608 635 404425184 404425211 6.000000e-03 52.8
39 TraesCS5D01G331800 chr1D 100.000 28 0 0 608 635 438321262 438321289 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G331800 chr5D 422760907 422764361 3454 False 2237.0 6381 94.3980 1 3455 3 chr5D.!!$F3 3454
1 TraesCS5D01G331800 chr5B 510378068 510382642 4574 False 630.3 2736 92.1195 1 3407 6 chr5B.!!$F2 3406
2 TraesCS5D01G331800 chr5A 536265684 536268386 2702 False 751.8 1530 90.7946 3 2769 5 chr5A.!!$F2 2766

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
881 951 0.03563 GCTCTCCACTCCATGCAACT 60.036 55.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2709 2820 0.030504 TTGCAACGCACTGTGAATGG 59.969 50.0 12.86 0.0 38.71 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 1.790481 GCAACTAGCACGGCGATTTTC 60.790 52.381 16.62 0.00 44.79 2.29
68 69 0.655733 ACGGCGATTTTCCTAATGCG 59.344 50.000 16.62 0.00 0.00 4.73
75 76 4.391830 GCGATTTTCCTAATGCGATATCCA 59.608 41.667 0.00 0.00 0.00 3.41
142 144 7.587037 ACTGTAGTAAACTGTACACCTGTAA 57.413 36.000 0.00 0.00 38.38 2.41
183 185 3.665745 AATCATTTGGTGCACTTGGAC 57.334 42.857 17.98 0.00 35.50 4.02
188 190 0.184692 TTGGTGCACTTGGACATGGA 59.815 50.000 17.98 0.00 38.19 3.41
195 197 1.069022 CACTTGGACATGGAAGTTGCG 60.069 52.381 0.00 0.00 29.73 4.85
230 232 1.738030 CGACCATGTTCCGGTTAGTCC 60.738 57.143 0.00 0.00 36.69 3.85
281 283 0.583438 CATGGAACGCTTCGCTATGG 59.417 55.000 0.00 0.00 0.00 2.74
282 284 0.178068 ATGGAACGCTTCGCTATGGT 59.822 50.000 0.00 0.00 0.00 3.55
283 285 0.739462 TGGAACGCTTCGCTATGGTG 60.739 55.000 0.00 0.00 0.00 4.17
285 287 1.076332 GAACGCTTCGCTATGGTGTT 58.924 50.000 0.00 0.00 36.57 3.32
286 288 0.796312 AACGCTTCGCTATGGTGTTG 59.204 50.000 0.00 0.00 33.33 3.33
287 289 0.320421 ACGCTTCGCTATGGTGTTGT 60.320 50.000 0.00 0.00 0.00 3.32
289 291 2.201732 CGCTTCGCTATGGTGTTGTAT 58.798 47.619 0.00 0.00 0.00 2.29
290 292 2.607635 CGCTTCGCTATGGTGTTGTATT 59.392 45.455 0.00 0.00 0.00 1.89
291 293 3.063452 CGCTTCGCTATGGTGTTGTATTT 59.937 43.478 0.00 0.00 0.00 1.40
292 294 4.436852 CGCTTCGCTATGGTGTTGTATTTT 60.437 41.667 0.00 0.00 0.00 1.82
358 415 8.471609 TGAAGGACATTTTCGTGTAGTATCATA 58.528 33.333 0.00 0.00 31.16 2.15
362 419 9.095065 GGACATTTTCGTGTAGTATCATACTTT 57.905 33.333 1.69 0.00 40.14 2.66
365 422 9.916397 CATTTTCGTGTAGTATCATACTTTTCC 57.084 33.333 1.69 0.00 40.14 3.13
366 423 9.661563 ATTTTCGTGTAGTATCATACTTTTCCA 57.338 29.630 1.69 0.00 40.14 3.53
372 429 8.840321 GTGTAGTATCATACTTTTCCAATGCAT 58.160 33.333 1.69 0.00 40.14 3.96
415 472 1.841919 TCCTGACCATGCATCACTCAT 59.158 47.619 0.00 0.00 0.00 2.90
447 504 1.374560 TGTCACCAACAGTTTGACCG 58.625 50.000 13.36 0.00 39.16 4.79
456 513 0.861837 CAGTTTGACCGTCTGCTGAC 59.138 55.000 13.35 13.35 39.70 3.51
478 543 5.593679 CTGAAAGTAATACTCCCTCCGAA 57.406 43.478 0.00 0.00 0.00 4.30
479 544 6.163135 CTGAAAGTAATACTCCCTCCGAAT 57.837 41.667 0.00 0.00 0.00 3.34
481 546 5.659525 TGAAAGTAATACTCCCTCCGAATCA 59.340 40.000 0.00 0.00 0.00 2.57
482 547 5.532664 AAGTAATACTCCCTCCGAATCAC 57.467 43.478 0.00 0.00 0.00 3.06
484 549 5.148502 AGTAATACTCCCTCCGAATCACAT 58.851 41.667 0.00 0.00 0.00 3.21
487 552 3.821421 ACTCCCTCCGAATCACATTAC 57.179 47.619 0.00 0.00 0.00 1.89
492 557 4.019681 TCCCTCCGAATCACATTACTTGTT 60.020 41.667 0.00 0.00 36.00 2.83
493 558 4.094887 CCCTCCGAATCACATTACTTGTTG 59.905 45.833 0.00 0.00 36.00 3.33
494 559 4.437390 CCTCCGAATCACATTACTTGTTGC 60.437 45.833 0.00 0.00 36.00 4.17
496 561 4.154015 TCCGAATCACATTACTTGTTGCTG 59.846 41.667 0.00 0.00 36.00 4.41
497 562 4.154015 CCGAATCACATTACTTGTTGCTGA 59.846 41.667 0.00 0.00 36.00 4.26
498 563 5.163723 CCGAATCACATTACTTGTTGCTGAT 60.164 40.000 0.00 0.00 36.00 2.90
499 564 6.317088 CGAATCACATTACTTGTTGCTGATT 58.683 36.000 0.00 0.00 36.00 2.57
500 565 6.803320 CGAATCACATTACTTGTTGCTGATTT 59.197 34.615 0.00 0.00 36.00 2.17
501 566 7.962373 CGAATCACATTACTTGTTGCTGATTTA 59.038 33.333 0.00 0.00 36.00 1.40
502 567 9.282247 GAATCACATTACTTGTTGCTGATTTAG 57.718 33.333 0.00 0.00 36.00 1.85
503 568 7.977789 TCACATTACTTGTTGCTGATTTAGA 57.022 32.000 0.00 0.00 36.00 2.10
504 569 8.389779 TCACATTACTTGTTGCTGATTTAGAA 57.610 30.769 0.00 0.00 36.00 2.10
505 570 8.289618 TCACATTACTTGTTGCTGATTTAGAAC 58.710 33.333 0.00 0.00 36.00 3.01
506 571 8.075574 CACATTACTTGTTGCTGATTTAGAACA 58.924 33.333 0.00 0.00 36.00 3.18
508 573 8.905702 CATTACTTGTTGCTGATTTAGAACAAC 58.094 33.333 0.00 0.00 40.72 3.32
510 575 7.100458 ACTTGTTGCTGATTTAGAACAACTT 57.900 32.000 0.00 0.00 40.88 2.66
511 576 7.196331 ACTTGTTGCTGATTTAGAACAACTTC 58.804 34.615 0.00 0.00 40.88 3.01
514 579 6.480651 TGTTGCTGATTTAGAACAACTTCGTA 59.519 34.615 0.00 0.00 40.88 3.43
515 580 6.462073 TGCTGATTTAGAACAACTTCGTAC 57.538 37.500 0.00 0.00 0.00 3.67
516 581 5.118050 TGCTGATTTAGAACAACTTCGTACG 59.882 40.000 9.53 9.53 0.00 3.67
517 582 5.344128 GCTGATTTAGAACAACTTCGTACGA 59.656 40.000 15.28 15.28 0.00 3.43
518 583 6.034683 GCTGATTTAGAACAACTTCGTACGAT 59.965 38.462 20.27 2.03 0.00 3.73
519 584 7.411588 GCTGATTTAGAACAACTTCGTACGATT 60.412 37.037 20.27 9.92 0.00 3.34
520 585 8.301730 TGATTTAGAACAACTTCGTACGATTT 57.698 30.769 20.27 12.53 0.00 2.17
521 586 9.409312 TGATTTAGAACAACTTCGTACGATTTA 57.591 29.630 20.27 3.05 0.00 1.40
522 587 9.882856 GATTTAGAACAACTTCGTACGATTTAG 57.117 33.333 20.27 15.93 0.00 1.85
524 589 6.686130 AGAACAACTTCGTACGATTTAGTG 57.314 37.500 20.27 15.12 0.00 2.74
525 590 4.898328 ACAACTTCGTACGATTTAGTGC 57.102 40.909 20.27 0.00 0.00 4.40
528 593 4.898328 ACTTCGTACGATTTAGTGCAAC 57.102 40.909 20.27 0.00 0.00 4.17
547 612 8.655378 GTGCAACTTTATACACATTACTTGTC 57.345 34.615 0.00 0.00 36.00 3.18
548 613 7.477422 GTGCAACTTTATACACATTACTTGTCG 59.523 37.037 0.00 0.00 36.00 4.35
549 614 6.464834 GCAACTTTATACACATTACTTGTCGC 59.535 38.462 0.00 0.00 36.00 5.19
550 615 6.657836 ACTTTATACACATTACTTGTCGCC 57.342 37.500 0.00 0.00 36.00 5.54
551 616 5.290158 ACTTTATACACATTACTTGTCGCCG 59.710 40.000 0.00 0.00 36.00 6.46
552 617 3.513680 ATACACATTACTTGTCGCCGA 57.486 42.857 0.00 0.00 36.00 5.54
553 618 2.380084 ACACATTACTTGTCGCCGAT 57.620 45.000 0.00 0.00 36.00 4.18
555 620 3.071479 ACACATTACTTGTCGCCGATTT 58.929 40.909 0.00 0.00 36.00 2.17
556 621 4.247258 ACACATTACTTGTCGCCGATTTA 58.753 39.130 0.00 0.00 36.00 1.40
557 622 4.328983 ACACATTACTTGTCGCCGATTTAG 59.671 41.667 0.00 0.00 36.00 1.85
559 624 5.517411 CACATTACTTGTCGCCGATTTAGTA 59.483 40.000 0.00 0.00 36.00 1.82
561 626 6.591062 ACATTACTTGTCGCCGATTTAGTAAA 59.409 34.615 16.79 0.00 30.89 2.01
562 627 7.118101 ACATTACTTGTCGCCGATTTAGTAAAA 59.882 33.333 16.79 4.38 30.89 1.52
563 628 5.273523 ACTTGTCGCCGATTTAGTAAAAC 57.726 39.130 0.00 0.00 0.00 2.43
564 629 4.992951 ACTTGTCGCCGATTTAGTAAAACT 59.007 37.500 0.00 0.00 0.00 2.66
565 630 5.467735 ACTTGTCGCCGATTTAGTAAAACTT 59.532 36.000 0.00 0.00 0.00 2.66
566 631 5.927954 TGTCGCCGATTTAGTAAAACTTT 57.072 34.783 0.00 0.00 0.00 2.66
567 632 7.171337 ACTTGTCGCCGATTTAGTAAAACTTTA 59.829 33.333 0.00 0.00 0.00 1.85
568 633 7.599630 TGTCGCCGATTTAGTAAAACTTTAT 57.400 32.000 0.00 0.00 0.00 1.40
569 634 8.700722 TGTCGCCGATTTAGTAAAACTTTATA 57.299 30.769 0.00 0.00 0.00 0.98
570 635 9.316730 TGTCGCCGATTTAGTAAAACTTTATAT 57.683 29.630 0.00 0.00 0.00 0.86
573 638 9.717844 CGCCGATTTAGTAAAACTTTATATACG 57.282 33.333 0.00 0.00 0.00 3.06
604 669 9.998106 AGTACAACTTTAGTATCATTGACAAGT 57.002 29.630 0.00 0.00 0.00 3.16
607 672 9.561069 ACAACTTTAGTATCATTGACAAGTTCT 57.439 29.630 0.00 0.00 32.07 3.01
616 681 9.994432 GTATCATTGACAAGTTCTCTATTTTGG 57.006 33.333 0.00 0.00 0.00 3.28
619 684 8.567948 TCATTGACAAGTTCTCTATTTTGGAAC 58.432 33.333 0.00 0.00 39.43 3.62
630 695 4.778958 TCTATTTTGGAACGGAGGGAGTAA 59.221 41.667 0.00 0.00 0.00 2.24
631 696 4.586306 ATTTTGGAACGGAGGGAGTAAT 57.414 40.909 0.00 0.00 0.00 1.89
632 697 5.703730 ATTTTGGAACGGAGGGAGTAATA 57.296 39.130 0.00 0.00 0.00 0.98
634 699 4.682778 TTGGAACGGAGGGAGTAATATG 57.317 45.455 0.00 0.00 0.00 1.78
635 700 2.969950 TGGAACGGAGGGAGTAATATGG 59.030 50.000 0.00 0.00 0.00 2.74
639 704 4.127918 ACGGAGGGAGTAATATGGATGA 57.872 45.455 0.00 0.00 0.00 2.92
640 705 4.689062 ACGGAGGGAGTAATATGGATGAT 58.311 43.478 0.00 0.00 0.00 2.45
642 707 4.202060 CGGAGGGAGTAATATGGATGATCG 60.202 50.000 0.00 0.00 0.00 3.69
643 708 4.100189 GGAGGGAGTAATATGGATGATCGG 59.900 50.000 0.00 0.00 0.00 4.18
645 710 4.959210 AGGGAGTAATATGGATGATCGGAG 59.041 45.833 0.00 0.00 0.00 4.63
647 712 4.100189 GGAGTAATATGGATGATCGGAGGG 59.900 50.000 0.00 0.00 0.00 4.30
648 713 4.947883 AGTAATATGGATGATCGGAGGGA 58.052 43.478 0.00 0.00 0.00 4.20
649 714 4.959210 AGTAATATGGATGATCGGAGGGAG 59.041 45.833 0.00 0.00 0.00 4.30
651 716 4.609866 ATATGGATGATCGGAGGGAGTA 57.390 45.455 0.00 0.00 0.00 2.59
652 717 2.294449 TGGATGATCGGAGGGAGTAG 57.706 55.000 0.00 0.00 0.00 2.57
653 718 1.499438 TGGATGATCGGAGGGAGTAGT 59.501 52.381 0.00 0.00 0.00 2.73
654 719 2.091278 TGGATGATCGGAGGGAGTAGTT 60.091 50.000 0.00 0.00 0.00 2.24
655 720 2.966516 GGATGATCGGAGGGAGTAGTTT 59.033 50.000 0.00 0.00 0.00 2.66
656 721 3.006003 GGATGATCGGAGGGAGTAGTTTC 59.994 52.174 0.00 0.00 0.00 2.78
657 722 3.095912 TGATCGGAGGGAGTAGTTTCA 57.904 47.619 0.00 0.00 0.00 2.69
658 723 3.643237 TGATCGGAGGGAGTAGTTTCAT 58.357 45.455 0.00 0.00 0.00 2.57
659 724 4.030913 TGATCGGAGGGAGTAGTTTCATT 58.969 43.478 0.00 0.00 0.00 2.57
660 725 4.099573 TGATCGGAGGGAGTAGTTTCATTC 59.900 45.833 0.00 0.00 0.00 2.67
665 730 5.302059 CGGAGGGAGTAGTTTCATTCTGATA 59.698 44.000 0.00 0.00 0.00 2.15
666 731 6.515862 CGGAGGGAGTAGTTTCATTCTGATAG 60.516 46.154 0.00 0.00 0.00 2.08
669 734 5.988561 GGGAGTAGTTTCATTCTGATAGCAG 59.011 44.000 0.24 0.24 43.67 4.24
845 913 7.562454 TCTCAATTTGAAATCATATCCCAAGCT 59.438 33.333 0.01 0.00 0.00 3.74
847 915 5.857471 TTTGAAATCATATCCCAAGCTGG 57.143 39.130 0.00 0.00 37.25 4.85
848 916 4.794311 TGAAATCATATCCCAAGCTGGA 57.206 40.909 4.00 0.00 40.96 3.86
849 917 5.329191 TGAAATCATATCCCAAGCTGGAT 57.671 39.130 10.27 10.27 46.82 3.41
850 918 5.708544 TGAAATCATATCCCAAGCTGGATT 58.291 37.500 10.65 0.00 42.62 3.01
852 920 7.472741 TGAAATCATATCCCAAGCTGGATTAT 58.527 34.615 10.65 1.40 42.62 1.28
853 921 7.395206 TGAAATCATATCCCAAGCTGGATTATG 59.605 37.037 10.65 11.45 42.62 1.90
854 922 6.647461 ATCATATCCCAAGCTGGATTATGA 57.353 37.500 10.65 15.14 42.62 2.15
881 951 0.035630 GCTCTCCACTCCATGCAACT 60.036 55.000 0.00 0.00 0.00 3.16
984 1077 1.077212 GCCATGCTCCTCACACCAT 60.077 57.895 0.00 0.00 0.00 3.55
985 1078 1.099879 GCCATGCTCCTCACACCATC 61.100 60.000 0.00 0.00 0.00 3.51
986 1079 0.545171 CCATGCTCCTCACACCATCT 59.455 55.000 0.00 0.00 0.00 2.90
987 1080 1.474677 CCATGCTCCTCACACCATCTC 60.475 57.143 0.00 0.00 0.00 2.75
988 1081 1.208776 CATGCTCCTCACACCATCTCA 59.791 52.381 0.00 0.00 0.00 3.27
989 1082 0.610174 TGCTCCTCACACCATCTCAC 59.390 55.000 0.00 0.00 0.00 3.51
990 1083 0.107945 GCTCCTCACACCATCTCACC 60.108 60.000 0.00 0.00 0.00 4.02
1008 1101 1.970114 CATCATCGCCATGGCCTCC 60.970 63.158 30.79 3.87 37.98 4.30
1032 1125 0.176680 ACCTTGCGATCCTAGTGCTG 59.823 55.000 0.00 0.00 0.00 4.41
1317 1410 3.681835 AGCGTGTGGGAGTCGGAC 61.682 66.667 0.00 0.00 0.00 4.79
1518 1611 4.988716 AGGGACGAGCCGTGGACA 62.989 66.667 4.94 0.00 41.37 4.02
1574 1667 2.586357 GCCTTCGATGGAGGACGC 60.586 66.667 20.87 0.61 0.00 5.19
1620 1713 4.394712 AAGCCCTTGACGCCTCCG 62.395 66.667 0.00 0.00 41.14 4.63
1686 1779 4.699522 GGAGACCAAACGGCGCCT 62.700 66.667 26.68 8.92 0.00 5.52
1779 1875 3.315142 CTTGCCTGACCTGCCGCTA 62.315 63.158 0.00 0.00 0.00 4.26
1839 1935 4.792804 GACCTGCAGCTGCCTCCC 62.793 72.222 34.64 17.92 41.18 4.30
1958 2054 1.377463 AGCCTCTGTACTCGTCGCT 60.377 57.895 0.00 0.00 0.00 4.93
1965 2061 3.566853 TACTCGTCGCTACCGCCG 61.567 66.667 0.00 0.00 0.00 6.46
2134 2230 2.125552 CGCCACCAGCTTCATCGA 60.126 61.111 0.00 0.00 40.39 3.59
2135 2231 2.169789 CGCCACCAGCTTCATCGAG 61.170 63.158 0.00 0.00 40.39 4.04
2149 2245 1.284715 TCGAGCGACGACAACATGT 59.715 52.632 0.00 0.00 46.45 3.21
2205 2301 4.101448 CACCTTCCCCTGGGAGCG 62.101 72.222 16.20 3.65 46.06 5.03
2275 2371 4.796231 CGCTCCCGTTCGGACAGG 62.796 72.222 13.08 0.00 34.86 4.00
2276 2372 4.452733 GCTCCCGTTCGGACAGGG 62.453 72.222 15.33 15.33 46.40 4.45
2426 2522 1.898574 CCGTGAGCTTGGCTTTGGT 60.899 57.895 0.00 0.00 39.88 3.67
2427 2523 1.576421 CGTGAGCTTGGCTTTGGTC 59.424 57.895 0.00 0.00 39.88 4.02
2459 2555 4.275196 GGCTCTGGTTTTCGAGTAGTTTTT 59.725 41.667 0.00 0.00 0.00 1.94
2504 2606 3.339253 TCACATCACATCCCTCACTTG 57.661 47.619 0.00 0.00 0.00 3.16
2515 2617 4.846779 TCCCTCACTTGTGTAATTTTGC 57.153 40.909 0.46 0.00 0.00 3.68
2518 2622 5.362430 TCCCTCACTTGTGTAATTTTGCTTT 59.638 36.000 0.46 0.00 0.00 3.51
2542 2650 2.758207 TTGGGTTCGTTCAGGGGCA 61.758 57.895 0.00 0.00 0.00 5.36
2545 2653 0.898326 GGGTTCGTTCAGGGGCAAAT 60.898 55.000 0.00 0.00 0.00 2.32
2581 2689 6.377146 TGTTGCTGAATTAGTTAGGGATTTCC 59.623 38.462 0.00 0.00 0.00 3.13
2626 2734 6.151004 TCATGTTATGCTTTGTGTTGATGTG 58.849 36.000 0.00 0.00 0.00 3.21
2627 2735 5.512753 TGTTATGCTTTGTGTTGATGTGT 57.487 34.783 0.00 0.00 0.00 3.72
2628 2736 5.900425 TGTTATGCTTTGTGTTGATGTGTT 58.100 33.333 0.00 0.00 0.00 3.32
2629 2737 5.976534 TGTTATGCTTTGTGTTGATGTGTTC 59.023 36.000 0.00 0.00 0.00 3.18
2630 2738 3.435105 TGCTTTGTGTTGATGTGTTCC 57.565 42.857 0.00 0.00 0.00 3.62
2650 2758 2.237143 CCATCCCATGTATCGGCAGTAT 59.763 50.000 0.00 0.00 0.00 2.12
2708 2819 6.770286 TTCCTTTATCTATCCTTGATGCCT 57.230 37.500 0.00 0.00 0.00 4.75
2709 2820 6.365970 TCCTTTATCTATCCTTGATGCCTC 57.634 41.667 0.00 0.00 0.00 4.70
2711 2822 5.013495 CCTTTATCTATCCTTGATGCCTCCA 59.987 44.000 0.00 0.00 0.00 3.86
2714 2825 4.630644 TCTATCCTTGATGCCTCCATTC 57.369 45.455 0.00 0.00 0.00 2.67
2721 2832 0.737219 GATGCCTCCATTCACAGTGC 59.263 55.000 0.00 0.00 0.00 4.40
2757 3011 3.488778 ACAATGGCAGCCAATTTTTCA 57.511 38.095 20.84 0.00 36.95 2.69
2770 3024 4.463891 CCAATTTTTCAGTATGGCCTGTCT 59.536 41.667 3.32 0.00 36.16 3.41
2773 3027 4.487714 TTTTCAGTATGGCCTGTCTAGG 57.512 45.455 3.32 0.00 40.59 3.02
2790 3927 0.032416 AGGGCACTGTATAGACGGGT 60.032 55.000 0.67 0.00 36.12 5.28
2796 3933 4.522022 GGCACTGTATAGACGGGTACTATT 59.478 45.833 0.67 0.00 36.12 1.73
2800 3937 7.486647 CACTGTATAGACGGGTACTATTTGTT 58.513 38.462 0.67 0.00 36.12 2.83
2818 3955 3.669536 TGTTCACCACGATATTTGCAGA 58.330 40.909 0.00 0.00 0.00 4.26
2822 3959 1.210478 ACCACGATATTTGCAGAGGCT 59.790 47.619 0.00 0.00 41.91 4.58
2825 3962 2.679837 CACGATATTTGCAGAGGCTTGT 59.320 45.455 0.00 0.00 41.91 3.16
2826 3963 2.679837 ACGATATTTGCAGAGGCTTGTG 59.320 45.455 0.00 0.00 41.91 3.33
2828 3965 3.242543 CGATATTTGCAGAGGCTTGTGTC 60.243 47.826 0.00 0.00 41.91 3.67
2829 3966 1.251251 ATTTGCAGAGGCTTGTGTCC 58.749 50.000 0.00 0.00 41.91 4.02
2830 3967 0.183492 TTTGCAGAGGCTTGTGTCCT 59.817 50.000 0.00 0.00 41.91 3.85
2832 3969 0.183492 TGCAGAGGCTTGTGTCCTTT 59.817 50.000 0.00 0.00 41.91 3.11
2833 3970 1.419762 TGCAGAGGCTTGTGTCCTTTA 59.580 47.619 0.00 0.00 41.91 1.85
2834 3971 1.807142 GCAGAGGCTTGTGTCCTTTAC 59.193 52.381 0.00 0.00 36.96 2.01
2835 3972 2.551071 GCAGAGGCTTGTGTCCTTTACT 60.551 50.000 0.00 0.00 36.96 2.24
2836 3973 3.070018 CAGAGGCTTGTGTCCTTTACTG 58.930 50.000 0.00 0.00 33.24 2.74
2837 3974 2.972713 AGAGGCTTGTGTCCTTTACTGA 59.027 45.455 0.00 0.00 33.24 3.41
2838 3975 3.584848 AGAGGCTTGTGTCCTTTACTGAT 59.415 43.478 0.00 0.00 33.24 2.90
2841 3978 3.437049 GGCTTGTGTCCTTTACTGATGAC 59.563 47.826 0.00 0.00 0.00 3.06
2877 4056 5.152623 TCTGAACCATCCAAAGTACAGAG 57.847 43.478 0.00 0.00 0.00 3.35
2878 4057 4.838423 TCTGAACCATCCAAAGTACAGAGA 59.162 41.667 0.00 0.00 0.00 3.10
2879 4058 4.894784 TGAACCATCCAAAGTACAGAGAC 58.105 43.478 0.00 0.00 0.00 3.36
2880 4059 4.346709 TGAACCATCCAAAGTACAGAGACA 59.653 41.667 0.00 0.00 0.00 3.41
2881 4060 4.974645 ACCATCCAAAGTACAGAGACAA 57.025 40.909 0.00 0.00 0.00 3.18
2882 4061 5.505181 ACCATCCAAAGTACAGAGACAAT 57.495 39.130 0.00 0.00 0.00 2.71
2883 4062 5.248640 ACCATCCAAAGTACAGAGACAATG 58.751 41.667 0.00 0.00 0.00 2.82
2884 4063 5.013079 ACCATCCAAAGTACAGAGACAATGA 59.987 40.000 0.00 0.00 0.00 2.57
2885 4064 6.118170 CCATCCAAAGTACAGAGACAATGAT 58.882 40.000 0.00 0.00 0.00 2.45
2886 4065 6.037940 CCATCCAAAGTACAGAGACAATGATG 59.962 42.308 0.00 0.00 0.00 3.07
2887 4066 6.114187 TCCAAAGTACAGAGACAATGATGT 57.886 37.500 0.00 0.00 44.25 3.06
2888 4067 5.934043 TCCAAAGTACAGAGACAATGATGTG 59.066 40.000 0.00 0.00 40.74 3.21
2889 4068 5.702670 CCAAAGTACAGAGACAATGATGTGT 59.297 40.000 0.00 0.00 40.74 3.72
2890 4069 6.347969 CCAAAGTACAGAGACAATGATGTGTG 60.348 42.308 0.00 0.00 40.74 3.82
2891 4070 5.474578 AGTACAGAGACAATGATGTGTGT 57.525 39.130 0.00 0.00 40.74 3.72
2892 4071 6.590234 AGTACAGAGACAATGATGTGTGTA 57.410 37.500 0.00 0.00 40.74 2.90
2893 4072 6.993079 AGTACAGAGACAATGATGTGTGTAA 58.007 36.000 0.00 0.00 40.74 2.41
2894 4073 7.615403 AGTACAGAGACAATGATGTGTGTAAT 58.385 34.615 0.00 0.00 40.74 1.89
2895 4074 8.749354 AGTACAGAGACAATGATGTGTGTAATA 58.251 33.333 0.00 0.00 40.74 0.98
2896 4075 9.366216 GTACAGAGACAATGATGTGTGTAATAA 57.634 33.333 4.03 0.00 40.74 1.40
2897 4076 8.846943 ACAGAGACAATGATGTGTGTAATAAA 57.153 30.769 0.00 0.00 40.74 1.40
2898 4077 8.939929 ACAGAGACAATGATGTGTGTAATAAAG 58.060 33.333 0.00 0.00 40.74 1.85
2899 4078 7.907045 CAGAGACAATGATGTGTGTAATAAAGC 59.093 37.037 0.00 0.00 40.74 3.51
2900 4079 7.607607 AGAGACAATGATGTGTGTAATAAAGCA 59.392 33.333 0.00 0.00 40.74 3.91
2901 4080 8.109705 AGACAATGATGTGTGTAATAAAGCAA 57.890 30.769 0.00 0.00 40.74 3.91
2902 4081 8.742777 AGACAATGATGTGTGTAATAAAGCAAT 58.257 29.630 0.00 0.00 40.74 3.56
2931 4110 8.744008 TTTGAGTTCTCTAGTAAAATCAGACG 57.256 34.615 8.96 0.00 31.93 4.18
2932 4111 6.853720 TGAGTTCTCTAGTAAAATCAGACGG 58.146 40.000 6.09 0.00 0.00 4.79
2933 4112 6.127703 TGAGTTCTCTAGTAAAATCAGACGGG 60.128 42.308 6.09 0.00 0.00 5.28
2934 4113 5.950549 AGTTCTCTAGTAAAATCAGACGGGA 59.049 40.000 0.00 0.00 0.00 5.14
2935 4114 6.436532 AGTTCTCTAGTAAAATCAGACGGGAA 59.563 38.462 0.00 0.00 0.00 3.97
2936 4115 6.205101 TCTCTAGTAAAATCAGACGGGAAC 57.795 41.667 0.00 0.00 0.00 3.62
2937 4116 5.713389 TCTCTAGTAAAATCAGACGGGAACA 59.287 40.000 0.00 0.00 0.00 3.18
2938 4117 5.717119 TCTAGTAAAATCAGACGGGAACAC 58.283 41.667 0.00 0.00 0.00 3.32
2939 4118 4.618920 AGTAAAATCAGACGGGAACACT 57.381 40.909 0.00 0.00 0.00 3.55
2940 4119 4.969484 AGTAAAATCAGACGGGAACACTT 58.031 39.130 0.00 0.00 0.00 3.16
2941 4120 6.105397 AGTAAAATCAGACGGGAACACTTA 57.895 37.500 0.00 0.00 0.00 2.24
2942 4121 6.527423 AGTAAAATCAGACGGGAACACTTAA 58.473 36.000 0.00 0.00 0.00 1.85
2943 4122 5.941948 AAAATCAGACGGGAACACTTAAG 57.058 39.130 0.00 0.00 0.00 1.85
2944 4123 4.618920 AATCAGACGGGAACACTTAAGT 57.381 40.909 1.12 1.12 0.00 2.24
2945 4124 4.618920 ATCAGACGGGAACACTTAAGTT 57.381 40.909 5.07 0.00 0.00 2.66
2946 4125 3.724374 TCAGACGGGAACACTTAAGTTG 58.276 45.455 5.07 4.54 0.00 3.16
2947 4126 2.806244 CAGACGGGAACACTTAAGTTGG 59.194 50.000 5.07 0.00 0.00 3.77
2948 4127 1.534163 GACGGGAACACTTAAGTTGGC 59.466 52.381 5.07 0.00 0.00 4.52
2949 4128 1.142262 ACGGGAACACTTAAGTTGGCT 59.858 47.619 5.07 0.00 0.00 4.75
2950 4129 2.369532 ACGGGAACACTTAAGTTGGCTA 59.630 45.455 5.07 0.00 0.00 3.93
2951 4130 3.000727 CGGGAACACTTAAGTTGGCTAG 58.999 50.000 5.07 0.00 0.00 3.42
2952 4131 2.747989 GGGAACACTTAAGTTGGCTAGC 59.252 50.000 6.04 6.04 0.00 3.42
2953 4132 2.747989 GGAACACTTAAGTTGGCTAGCC 59.252 50.000 27.71 27.71 0.00 3.93
2954 4133 3.559384 GGAACACTTAAGTTGGCTAGCCT 60.559 47.826 33.07 16.54 36.94 4.58
2955 4134 4.323257 GGAACACTTAAGTTGGCTAGCCTA 60.323 45.833 33.07 24.39 36.94 3.93
2956 4135 5.429130 GAACACTTAAGTTGGCTAGCCTAT 58.571 41.667 33.07 18.54 36.94 2.57
2957 4136 6.407752 GGAACACTTAAGTTGGCTAGCCTATA 60.408 42.308 33.07 17.58 36.94 1.31
2958 4137 6.749036 ACACTTAAGTTGGCTAGCCTATAT 57.251 37.500 33.07 20.16 36.94 0.86
2959 4138 7.850935 ACACTTAAGTTGGCTAGCCTATATA 57.149 36.000 33.07 19.20 36.94 0.86
2960 4139 8.437274 ACACTTAAGTTGGCTAGCCTATATAT 57.563 34.615 33.07 16.89 36.94 0.86
2961 4140 9.543231 ACACTTAAGTTGGCTAGCCTATATATA 57.457 33.333 33.07 15.94 36.94 0.86
2964 4143 9.482627 CTTAAGTTGGCTAGCCTATATATATGC 57.517 37.037 33.07 12.10 36.94 3.14
2965 4144 7.437713 AAGTTGGCTAGCCTATATATATGCA 57.562 36.000 33.07 6.61 36.94 3.96
2966 4145 7.623999 AGTTGGCTAGCCTATATATATGCAT 57.376 36.000 33.07 3.79 36.94 3.96
2967 4146 8.727100 AGTTGGCTAGCCTATATATATGCATA 57.273 34.615 33.07 9.27 36.94 3.14
2968 4147 9.331466 AGTTGGCTAGCCTATATATATGCATAT 57.669 33.333 33.07 22.31 36.94 1.78
2985 4164 9.688091 ATATGCATATATATAGTACTCCCTCCG 57.312 37.037 17.72 0.00 0.00 4.63
2986 4165 6.907961 TGCATATATATAGTACTCCCTCCGT 58.092 40.000 0.00 0.00 0.00 4.69
2987 4166 7.351952 TGCATATATATAGTACTCCCTCCGTT 58.648 38.462 0.00 0.00 0.00 4.44
2988 4167 7.501559 TGCATATATATAGTACTCCCTCCGTTC 59.498 40.741 0.00 0.00 0.00 3.95
2989 4168 7.040548 GCATATATATAGTACTCCCTCCGTTCC 60.041 44.444 0.00 0.00 0.00 3.62
2990 4169 6.655376 ATATATAGTACTCCCTCCGTTCCT 57.345 41.667 0.00 0.00 0.00 3.36
2991 4170 7.761981 ATATATAGTACTCCCTCCGTTCCTA 57.238 40.000 0.00 0.00 0.00 2.94
2992 4171 4.803329 ATAGTACTCCCTCCGTTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
2993 4172 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2994 4173 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2995 4174 3.705072 AGTACTCCCTCCGTTCCTAAATG 59.295 47.826 0.00 0.00 0.00 2.32
2996 4175 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
2997 4176 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
2998 4177 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
2999 4178 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
3000 4179 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
3001 4180 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
3002 4181 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
3003 4182 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
3004 4183 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
3005 4184 6.653740 CCTCCGTTCCTAAATGTAAGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
3006 4185 7.174426 CCTCCGTTCCTAAATGTAAGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
3081 4260 9.606631 AGAATGTAGATTCACTCATTTTACTCC 57.393 33.333 14.46 0.00 40.59 3.85
3082 4261 8.425577 AATGTAGATTCACTCATTTTACTCCG 57.574 34.615 0.00 0.00 0.00 4.63
3083 4262 5.810587 TGTAGATTCACTCATTTTACTCCGC 59.189 40.000 0.00 0.00 0.00 5.54
3084 4263 4.832248 AGATTCACTCATTTTACTCCGCA 58.168 39.130 0.00 0.00 0.00 5.69
3085 4264 5.431765 AGATTCACTCATTTTACTCCGCAT 58.568 37.500 0.00 0.00 0.00 4.73
3086 4265 4.944962 TTCACTCATTTTACTCCGCATG 57.055 40.909 0.00 0.00 0.00 4.06
3087 4266 3.937814 TCACTCATTTTACTCCGCATGT 58.062 40.909 0.00 0.00 0.00 3.21
3088 4267 5.079689 TCACTCATTTTACTCCGCATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3089 4268 5.109210 TCACTCATTTTACTCCGCATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3090 4269 4.870426 CACTCATTTTACTCCGCATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3091 4270 5.005779 CACTCATTTTACTCCGCATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3092 4271 4.439057 TCATTTTACTCCGCATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
3093 4272 3.965379 TTTTACTCCGCATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
3094 4273 4.481368 TTTTACTCCGCATGTAGTCCAT 57.519 40.909 0.00 0.00 0.00 3.41
3095 4274 5.601583 TTTTACTCCGCATGTAGTCCATA 57.398 39.130 0.00 0.00 30.71 2.74
3096 4275 5.801531 TTTACTCCGCATGTAGTCCATAT 57.198 39.130 0.00 0.00 30.71 1.78
3097 4276 5.801531 TTACTCCGCATGTAGTCCATATT 57.198 39.130 0.00 0.00 30.71 1.28
3098 4277 6.904463 TTACTCCGCATGTAGTCCATATTA 57.096 37.500 0.00 0.00 30.71 0.98
3099 4278 5.801531 ACTCCGCATGTAGTCCATATTAA 57.198 39.130 0.00 0.00 30.71 1.40
3100 4279 6.169557 ACTCCGCATGTAGTCCATATTAAA 57.830 37.500 0.00 0.00 30.71 1.52
3101 4280 6.588204 ACTCCGCATGTAGTCCATATTAAAA 58.412 36.000 0.00 0.00 30.71 1.52
3102 4281 7.051623 ACTCCGCATGTAGTCCATATTAAAAA 58.948 34.615 0.00 0.00 30.71 1.94
3103 4282 7.012044 ACTCCGCATGTAGTCCATATTAAAAAC 59.988 37.037 0.00 0.00 30.71 2.43
3104 4283 7.051623 TCCGCATGTAGTCCATATTAAAAACT 58.948 34.615 0.00 0.00 30.71 2.66
3105 4284 7.225931 TCCGCATGTAGTCCATATTAAAAACTC 59.774 37.037 0.00 0.00 30.71 3.01
3106 4285 7.226720 CCGCATGTAGTCCATATTAAAAACTCT 59.773 37.037 0.00 0.00 30.71 3.24
3107 4286 8.612619 CGCATGTAGTCCATATTAAAAACTCTT 58.387 33.333 0.00 0.00 30.71 2.85
3133 4312 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
3134 4313 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3135 4314 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3136 4315 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3137 4316 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
3138 4317 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
3139 4318 7.954620 ACTTATATTTAGGAACGGAGGGAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
3140 4319 9.471702 CTTATATTTAGGAACGGAGGGAGTATA 57.528 37.037 0.00 0.00 0.00 1.47
3147 4478 3.369242 ACGGAGGGAGTATATAGGAGC 57.631 52.381 0.00 0.00 0.00 4.70
3175 4506 4.041075 TGCATGACAACCTAGGTTTGAGTA 59.959 41.667 24.99 9.95 36.00 2.59
3230 4639 5.589855 TGTCAAAACACATCACTGAATCTGT 59.410 36.000 0.00 0.00 0.00 3.41
3233 4642 3.667497 ACACATCACTGAATCTGTCGT 57.333 42.857 0.00 0.00 0.00 4.34
3264 4673 2.430367 GGCGAGGTGGAAGGTTGT 59.570 61.111 0.00 0.00 0.00 3.32
3267 4676 0.606604 GCGAGGTGGAAGGTTGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
3276 4685 1.208293 GAAGGTTGTAGAGGCCCTCTG 59.792 57.143 23.85 0.00 41.37 3.35
3277 4686 0.117340 AGGTTGTAGAGGCCCTCTGT 59.883 55.000 23.85 0.00 41.37 3.41
3278 4687 0.250513 GGTTGTAGAGGCCCTCTGTG 59.749 60.000 23.85 0.00 41.37 3.66
3279 4688 0.391793 GTTGTAGAGGCCCTCTGTGC 60.392 60.000 23.85 13.25 41.37 4.57
3287 4696 1.153208 GCCCTCTGTGCCAGATGAG 60.153 63.158 5.50 0.00 39.92 2.90
3288 4697 1.525923 CCCTCTGTGCCAGATGAGG 59.474 63.158 5.50 0.00 39.92 3.86
3290 4699 0.907486 CCTCTGTGCCAGATGAGGAA 59.093 55.000 5.50 0.00 46.53 3.36
3291 4700 1.406614 CCTCTGTGCCAGATGAGGAAC 60.407 57.143 5.50 0.00 46.53 3.62
3296 4705 1.555075 GTGCCAGATGAGGAACAGGTA 59.445 52.381 0.00 0.00 37.16 3.08
3299 4708 2.681097 GCCAGATGAGGAACAGGTAACC 60.681 54.545 0.00 0.00 37.17 2.85
3327 4736 7.649533 ATGAATATGATGTTCAAGCCTTCAA 57.350 32.000 8.66 0.00 38.89 2.69
3344 4753 3.666883 TCAACAGTTTACACAAGCACG 57.333 42.857 0.00 0.00 0.00 5.34
3345 4754 3.004171 TCAACAGTTTACACAAGCACGT 58.996 40.909 0.00 0.00 0.00 4.49
3353 4762 2.992089 CACAAGCACGTGTCTCCTT 58.008 52.632 18.38 8.85 32.00 3.36
3359 4768 1.287730 GCACGTGTCTCCTTCTGCTG 61.288 60.000 18.38 0.00 0.00 4.41
3360 4769 1.005630 ACGTGTCTCCTTCTGCTGC 60.006 57.895 0.00 0.00 0.00 5.25
3361 4770 1.291588 CGTGTCTCCTTCTGCTGCT 59.708 57.895 0.00 0.00 0.00 4.24
3362 4771 0.320247 CGTGTCTCCTTCTGCTGCTT 60.320 55.000 0.00 0.00 0.00 3.91
3363 4772 1.155042 GTGTCTCCTTCTGCTGCTTG 58.845 55.000 0.00 0.00 0.00 4.01
3364 4773 0.761187 TGTCTCCTTCTGCTGCTTGT 59.239 50.000 0.00 0.00 0.00 3.16
3365 4774 1.270518 TGTCTCCTTCTGCTGCTTGTC 60.271 52.381 0.00 0.00 0.00 3.18
3366 4775 0.037882 TCTCCTTCTGCTGCTTGTCG 60.038 55.000 0.00 0.00 0.00 4.35
3372 4781 3.257393 CTTCTGCTGCTTGTCGTATTCT 58.743 45.455 0.00 0.00 0.00 2.40
3375 4784 0.375106 GCTGCTTGTCGTATTCTGCC 59.625 55.000 0.00 0.00 0.00 4.85
3378 4787 1.270571 TGCTTGTCGTATTCTGCCACA 60.271 47.619 0.00 0.00 0.00 4.17
3379 4788 2.009774 GCTTGTCGTATTCTGCCACAT 58.990 47.619 0.00 0.00 0.00 3.21
3380 4789 2.223112 GCTTGTCGTATTCTGCCACATG 60.223 50.000 0.00 0.00 0.00 3.21
3408 4817 2.842208 CACGTCTTGTGGCTTTCAAA 57.158 45.000 0.00 0.00 45.21 2.69
3409 4818 2.719798 CACGTCTTGTGGCTTTCAAAG 58.280 47.619 0.00 0.00 45.21 2.77
3424 4833 6.372014 CTTTCAAAGCACATCAAGAATTCG 57.628 37.500 0.00 0.00 0.00 3.34
3425 4834 5.687770 TTCAAAGCACATCAAGAATTCGA 57.312 34.783 0.00 0.00 0.00 3.71
3426 4835 5.885230 TCAAAGCACATCAAGAATTCGAT 57.115 34.783 0.00 0.00 0.00 3.59
3427 4836 5.633927 TCAAAGCACATCAAGAATTCGATG 58.366 37.500 17.05 17.05 43.78 3.84
3428 4837 5.412286 TCAAAGCACATCAAGAATTCGATGA 59.588 36.000 22.56 19.49 41.28 2.92
3429 4838 5.885230 AAGCACATCAAGAATTCGATGAA 57.115 34.783 22.56 8.65 41.28 2.57
3430 4839 5.885230 AGCACATCAAGAATTCGATGAAA 57.115 34.783 22.56 4.83 41.28 2.69
3431 4840 5.877031 AGCACATCAAGAATTCGATGAAAG 58.123 37.500 22.56 17.64 41.28 2.62
3432 4841 5.413833 AGCACATCAAGAATTCGATGAAAGT 59.586 36.000 22.56 18.09 41.28 2.66
3433 4842 5.736358 GCACATCAAGAATTCGATGAAAGTC 59.264 40.000 22.56 13.31 41.28 3.01
3434 4843 6.402983 GCACATCAAGAATTCGATGAAAGTCT 60.403 38.462 22.56 6.11 41.28 3.24
3435 4844 7.524912 CACATCAAGAATTCGATGAAAGTCTT 58.475 34.615 22.56 5.56 41.28 3.01
3436 4845 8.019669 CACATCAAGAATTCGATGAAAGTCTTT 58.980 33.333 22.56 0.00 41.28 2.52
3437 4846 8.019669 ACATCAAGAATTCGATGAAAGTCTTTG 58.980 33.333 22.56 15.26 41.28 2.77
3438 4847 6.373779 TCAAGAATTCGATGAAAGTCTTTGC 58.626 36.000 12.71 0.00 31.87 3.68
3439 4848 6.205464 TCAAGAATTCGATGAAAGTCTTTGCT 59.795 34.615 12.71 0.00 31.87 3.91
3440 4849 5.936054 AGAATTCGATGAAAGTCTTTGCTG 58.064 37.500 1.60 0.00 0.00 4.41
3441 4850 4.691860 ATTCGATGAAAGTCTTTGCTGG 57.308 40.909 1.60 0.00 0.00 4.85
3442 4851 3.126001 TCGATGAAAGTCTTTGCTGGT 57.874 42.857 1.60 0.00 0.00 4.00
3443 4852 3.476552 TCGATGAAAGTCTTTGCTGGTT 58.523 40.909 1.60 0.00 0.00 3.67
3444 4853 3.882888 TCGATGAAAGTCTTTGCTGGTTT 59.117 39.130 1.60 0.00 0.00 3.27
3445 4854 4.338118 TCGATGAAAGTCTTTGCTGGTTTT 59.662 37.500 1.60 0.00 0.00 2.43
3446 4855 4.442073 CGATGAAAGTCTTTGCTGGTTTTG 59.558 41.667 1.60 0.00 0.00 2.44
3447 4856 3.520569 TGAAAGTCTTTGCTGGTTTTGC 58.479 40.909 1.60 0.00 0.00 3.68
3448 4857 3.056250 TGAAAGTCTTTGCTGGTTTTGCA 60.056 39.130 1.60 0.00 38.80 4.08
3449 4858 3.825143 AAGTCTTTGCTGGTTTTGCAT 57.175 38.095 0.00 0.00 40.34 3.96
3450 4859 3.825143 AGTCTTTGCTGGTTTTGCATT 57.175 38.095 0.00 0.00 40.34 3.56
3451 4860 3.721035 AGTCTTTGCTGGTTTTGCATTC 58.279 40.909 0.00 0.00 40.34 2.67
3452 4861 3.132646 AGTCTTTGCTGGTTTTGCATTCA 59.867 39.130 0.00 0.00 40.34 2.57
3453 4862 4.060205 GTCTTTGCTGGTTTTGCATTCAT 58.940 39.130 0.00 0.00 40.34 2.57
3454 4863 4.059511 TCTTTGCTGGTTTTGCATTCATG 58.940 39.130 0.00 0.00 40.34 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 6.820152 TGATGATCTTTGGATATCGCATTAGG 59.180 38.462 0.00 0.00 31.46 2.69
68 69 7.798596 ACAACACTGATGATCTTTGGATATC 57.201 36.000 0.00 0.00 31.46 1.63
75 76 5.278169 GCAGACAACAACACTGATGATCTTT 60.278 40.000 0.00 0.00 34.07 2.52
142 144 5.514274 TTTCACGAAAATTTTCAGGAGCT 57.486 34.783 26.20 0.00 37.01 4.09
183 185 3.976793 ATAAGATGCGCAACTTCCATG 57.023 42.857 32.51 0.00 0.00 3.66
188 190 4.403453 GTCGAAAATAAGATGCGCAACTT 58.597 39.130 31.48 31.48 0.00 2.66
195 197 4.034048 ACATGGTCGTCGAAAATAAGATGC 59.966 41.667 0.00 0.00 0.00 3.91
230 232 2.863153 CGCCAAAAGCACCGAGAG 59.137 61.111 0.00 0.00 44.04 3.20
281 283 4.819630 TCCCTCACAGTGAAAATACAACAC 59.180 41.667 4.41 0.00 35.15 3.32
282 284 4.819630 GTCCCTCACAGTGAAAATACAACA 59.180 41.667 4.41 0.00 0.00 3.33
283 285 4.819630 TGTCCCTCACAGTGAAAATACAAC 59.180 41.667 4.41 0.00 0.00 3.32
285 287 4.698201 TGTCCCTCACAGTGAAAATACA 57.302 40.909 4.41 4.40 0.00 2.29
286 288 5.003804 ACATGTCCCTCACAGTGAAAATAC 58.996 41.667 4.41 1.86 38.85 1.89
287 289 5.003160 CACATGTCCCTCACAGTGAAAATA 58.997 41.667 4.41 0.00 38.85 1.40
289 291 3.213506 CACATGTCCCTCACAGTGAAAA 58.786 45.455 4.41 0.00 38.85 2.29
290 292 2.172505 ACACATGTCCCTCACAGTGAAA 59.827 45.455 4.41 0.00 38.85 2.69
291 293 1.768275 ACACATGTCCCTCACAGTGAA 59.232 47.619 4.41 0.00 38.85 3.18
292 294 1.070601 CACACATGTCCCTCACAGTGA 59.929 52.381 2.48 2.48 38.85 3.41
358 415 7.123997 TGTGAACCATATATGCATTGGAAAAGT 59.876 33.333 20.37 1.47 34.52 2.66
362 419 5.890419 TGTGTGAACCATATATGCATTGGAA 59.110 36.000 20.37 5.11 34.52 3.53
365 422 6.134040 TGTGTGTGAACCATATATGCATTG 57.866 37.500 3.54 0.00 0.00 2.82
366 423 6.377996 ACTTGTGTGTGAACCATATATGCATT 59.622 34.615 3.54 3.87 0.00 3.56
372 429 7.504238 AGGAAAAACTTGTGTGTGAACCATATA 59.496 33.333 0.00 0.00 0.00 0.86
447 504 5.808030 GGAGTATTACTTTCAGTCAGCAGAC 59.192 44.000 0.05 0.05 45.31 3.51
456 513 5.593679 TTCGGAGGGAGTATTACTTTCAG 57.406 43.478 0.00 0.00 0.00 3.02
465 530 5.148502 AGTAATGTGATTCGGAGGGAGTAT 58.851 41.667 0.00 0.00 0.00 2.12
474 539 4.154015 TCAGCAACAAGTAATGTGATTCGG 59.846 41.667 0.00 0.00 42.99 4.30
477 542 9.013229 TCTAAATCAGCAACAAGTAATGTGATT 57.987 29.630 0.00 0.00 42.99 2.57
478 543 8.565896 TCTAAATCAGCAACAAGTAATGTGAT 57.434 30.769 0.00 0.00 42.99 3.06
479 544 7.977789 TCTAAATCAGCAACAAGTAATGTGA 57.022 32.000 0.00 0.00 42.99 3.58
481 546 8.165239 TGTTCTAAATCAGCAACAAGTAATGT 57.835 30.769 0.00 0.00 46.82 2.71
482 547 8.905702 GTTGTTCTAAATCAGCAACAAGTAATG 58.094 33.333 0.00 0.00 39.17 1.90
484 549 8.220755 AGTTGTTCTAAATCAGCAACAAGTAA 57.779 30.769 0.00 0.00 41.07 2.24
487 552 6.358030 CGAAGTTGTTCTAAATCAGCAACAAG 59.642 38.462 0.00 0.00 41.07 3.16
492 557 5.118050 CGTACGAAGTTGTTCTAAATCAGCA 59.882 40.000 10.44 0.00 37.78 4.41
493 558 5.344128 TCGTACGAAGTTGTTCTAAATCAGC 59.656 40.000 17.11 0.00 37.78 4.26
494 559 6.922980 TCGTACGAAGTTGTTCTAAATCAG 57.077 37.500 17.11 0.00 37.78 2.90
496 561 9.882856 CTAAATCGTACGAAGTTGTTCTAAATC 57.117 33.333 23.56 0.00 37.78 2.17
497 562 9.415544 ACTAAATCGTACGAAGTTGTTCTAAAT 57.584 29.630 23.56 0.00 37.78 1.40
498 563 8.693504 CACTAAATCGTACGAAGTTGTTCTAAA 58.306 33.333 23.56 2.20 37.78 1.85
499 564 7.148918 GCACTAAATCGTACGAAGTTGTTCTAA 60.149 37.037 23.56 2.87 37.78 2.10
500 565 6.306356 GCACTAAATCGTACGAAGTTGTTCTA 59.694 38.462 23.56 3.54 37.78 2.10
501 566 5.118203 GCACTAAATCGTACGAAGTTGTTCT 59.882 40.000 23.56 0.00 37.78 3.01
502 567 5.107760 TGCACTAAATCGTACGAAGTTGTTC 60.108 40.000 23.56 13.87 37.78 3.18
503 568 4.746115 TGCACTAAATCGTACGAAGTTGTT 59.254 37.500 23.56 8.73 37.78 2.83
504 569 4.300803 TGCACTAAATCGTACGAAGTTGT 58.699 39.130 23.56 16.01 37.78 3.32
505 570 4.896562 TGCACTAAATCGTACGAAGTTG 57.103 40.909 23.56 15.39 37.78 3.16
506 571 4.986659 AGTTGCACTAAATCGTACGAAGTT 59.013 37.500 23.56 20.27 37.78 2.66
508 573 5.511088 AAGTTGCACTAAATCGTACGAAG 57.489 39.130 23.56 17.39 0.00 3.79
510 575 7.754475 TGTATAAAGTTGCACTAAATCGTACGA 59.246 33.333 21.93 21.93 0.00 3.43
511 576 7.837923 GTGTATAAAGTTGCACTAAATCGTACG 59.162 37.037 9.53 9.53 0.00 3.67
514 579 7.661127 TGTGTATAAAGTTGCACTAAATCGT 57.339 32.000 0.00 0.00 33.44 3.73
520 585 9.496873 ACAAGTAATGTGTATAAAGTTGCACTA 57.503 29.630 0.00 0.00 41.93 2.74
521 586 8.391075 ACAAGTAATGTGTATAAAGTTGCACT 57.609 30.769 0.00 0.00 41.93 4.40
522 587 7.477422 CGACAAGTAATGTGTATAAAGTTGCAC 59.523 37.037 0.00 0.00 44.12 4.57
524 589 6.464834 GCGACAAGTAATGTGTATAAAGTTGC 59.535 38.462 0.00 0.00 44.12 4.17
525 590 6.959311 GGCGACAAGTAATGTGTATAAAGTTG 59.041 38.462 0.00 0.00 44.12 3.16
528 593 5.517411 TCGGCGACAAGTAATGTGTATAAAG 59.483 40.000 4.99 0.00 44.12 1.85
530 595 4.996344 TCGGCGACAAGTAATGTGTATAA 58.004 39.130 4.99 0.00 44.12 0.98
532 597 3.513680 TCGGCGACAAGTAATGTGTAT 57.486 42.857 4.99 0.00 44.12 2.29
534 599 2.380084 ATCGGCGACAAGTAATGTGT 57.620 45.000 13.76 0.00 44.12 3.72
540 605 6.158598 AGTTTTACTAAATCGGCGACAAGTA 58.841 36.000 13.76 16.83 0.00 2.24
541 606 4.992951 AGTTTTACTAAATCGGCGACAAGT 59.007 37.500 13.76 17.89 0.00 3.16
542 607 5.526010 AGTTTTACTAAATCGGCGACAAG 57.474 39.130 13.76 12.59 0.00 3.16
544 609 5.927954 AAAGTTTTACTAAATCGGCGACA 57.072 34.783 13.76 0.00 0.00 4.35
547 612 9.717844 CGTATATAAAGTTTTACTAAATCGGCG 57.282 33.333 0.00 0.00 0.00 6.46
578 643 9.998106 ACTTGTCAATGATACTAAAGTTGTACT 57.002 29.630 0.00 0.00 0.00 2.73
581 646 9.561069 AGAACTTGTCAATGATACTAAAGTTGT 57.439 29.630 12.30 8.10 36.73 3.32
590 655 9.994432 CCAAAATAGAGAACTTGTCAATGATAC 57.006 33.333 0.00 0.00 0.00 2.24
591 656 9.958180 TCCAAAATAGAGAACTTGTCAATGATA 57.042 29.630 0.00 0.00 0.00 2.15
595 660 7.308589 CCGTTCCAAAATAGAGAACTTGTCAAT 60.309 37.037 0.00 0.00 38.17 2.57
598 663 5.699458 TCCGTTCCAAAATAGAGAACTTGTC 59.301 40.000 0.00 0.00 38.17 3.18
600 665 5.122396 CCTCCGTTCCAAAATAGAGAACTTG 59.878 44.000 0.00 0.00 38.17 3.16
604 669 3.841845 TCCCTCCGTTCCAAAATAGAGAA 59.158 43.478 0.00 0.00 0.00 2.87
605 670 3.446968 TCCCTCCGTTCCAAAATAGAGA 58.553 45.455 0.00 0.00 0.00 3.10
606 671 3.197983 ACTCCCTCCGTTCCAAAATAGAG 59.802 47.826 0.00 0.00 0.00 2.43
607 672 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
608 673 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
614 679 2.969950 CCATATTACTCCCTCCGTTCCA 59.030 50.000 0.00 0.00 0.00 3.53
616 681 4.527038 TCATCCATATTACTCCCTCCGTTC 59.473 45.833 0.00 0.00 0.00 3.95
619 684 4.202060 CGATCATCCATATTACTCCCTCCG 60.202 50.000 0.00 0.00 0.00 4.63
630 695 3.481559 ACTCCCTCCGATCATCCATAT 57.518 47.619 0.00 0.00 0.00 1.78
631 696 3.333980 ACTACTCCCTCCGATCATCCATA 59.666 47.826 0.00 0.00 0.00 2.74
632 697 2.110899 ACTACTCCCTCCGATCATCCAT 59.889 50.000 0.00 0.00 0.00 3.41
634 699 2.296073 ACTACTCCCTCCGATCATCC 57.704 55.000 0.00 0.00 0.00 3.51
635 700 3.637229 TGAAACTACTCCCTCCGATCATC 59.363 47.826 0.00 0.00 0.00 2.92
639 704 4.100189 CAGAATGAAACTACTCCCTCCGAT 59.900 45.833 0.00 0.00 39.69 4.18
640 705 3.447586 CAGAATGAAACTACTCCCTCCGA 59.552 47.826 0.00 0.00 39.69 4.55
659 724 6.483974 GCTAGTAGTGTTACTCTGCTATCAGA 59.516 42.308 11.41 0.00 46.43 3.27
660 725 6.485313 AGCTAGTAGTGTTACTCTGCTATCAG 59.515 42.308 11.41 5.06 42.64 2.90
665 730 4.337145 ACAGCTAGTAGTGTTACTCTGCT 58.663 43.478 9.66 9.66 43.94 4.24
666 731 4.705337 ACAGCTAGTAGTGTTACTCTGC 57.295 45.455 0.00 0.00 40.55 4.26
669 734 8.659925 TCAGTATACAGCTAGTAGTGTTACTC 57.340 38.462 5.50 0.00 40.55 2.59
721 788 0.678048 CTAACCTTGCTGCCACCTCC 60.678 60.000 0.00 0.00 0.00 4.30
799 866 3.573538 AGATGATGGATCGAGTCAGAAGG 59.426 47.826 0.00 0.00 36.04 3.46
801 868 4.210331 TGAGATGATGGATCGAGTCAGAA 58.790 43.478 0.00 0.00 36.04 3.02
881 951 3.830755 GTGGTAGTAGGAGAAAGGTGTGA 59.169 47.826 0.00 0.00 0.00 3.58
984 1077 0.107268 CCATGGCGATGATGGTGAGA 59.893 55.000 10.66 0.00 36.38 3.27
985 1078 1.512996 GCCATGGCGATGATGGTGAG 61.513 60.000 23.48 0.00 42.25 3.51
986 1079 1.526686 GCCATGGCGATGATGGTGA 60.527 57.895 23.48 0.00 42.25 4.02
987 1080 2.558286 GGCCATGGCGATGATGGTG 61.558 63.158 29.90 0.00 42.25 4.17
988 1081 2.203394 GGCCATGGCGATGATGGT 60.203 61.111 29.90 0.00 42.25 3.55
989 1082 1.970114 GAGGCCATGGCGATGATGG 60.970 63.158 29.90 4.40 43.01 3.51
990 1083 1.970114 GGAGGCCATGGCGATGATG 60.970 63.158 29.90 0.00 43.06 3.07
1008 1101 3.797184 GCACTAGGATCGCAAGGTAAGAG 60.797 52.174 0.00 0.00 38.47 2.85
1341 1434 3.553095 GAAGGCCAGGTCGCAGGTT 62.553 63.158 5.01 0.00 0.00 3.50
1365 1458 4.379243 AACAGCTCGAGCCCCACG 62.379 66.667 32.94 18.42 43.38 4.94
1600 1693 1.448717 GAGGCGTCAAGGGCTTCTC 60.449 63.158 0.52 0.00 43.66 2.87
1601 1694 2.665603 GAGGCGTCAAGGGCTTCT 59.334 61.111 0.52 0.00 43.66 2.85
1602 1695 2.436824 GGAGGCGTCAAGGGCTTC 60.437 66.667 8.91 0.00 43.66 3.86
1603 1696 4.394712 CGGAGGCGTCAAGGGCTT 62.395 66.667 8.91 0.00 43.66 4.35
1686 1779 4.357947 GGCGACGTGTCAGCTGGA 62.358 66.667 15.13 0.00 32.56 3.86
1908 2004 3.124921 GGGTTCGGGTGCATGTCG 61.125 66.667 0.00 0.00 0.00 4.35
1965 2061 1.598130 GATAGGGTGCATGTCCGCC 60.598 63.158 0.00 0.00 34.62 6.13
1970 2066 1.383943 TCGGGGATAGGGTGCATGT 60.384 57.895 0.00 0.00 0.00 3.21
2006 2102 2.430921 GAGGTGGTGACGAGTGCG 60.431 66.667 0.00 0.00 44.79 5.34
2149 2245 1.191489 TGAGGTGGTGGCGAGAATGA 61.191 55.000 0.00 0.00 0.00 2.57
2426 2522 3.385384 CCAGAGCCACCAGAGCGA 61.385 66.667 0.00 0.00 34.64 4.93
2427 2523 2.738213 AAACCAGAGCCACCAGAGCG 62.738 60.000 0.00 0.00 34.64 5.03
2459 2555 4.201871 ACAAACTTGCGAACGAGAATGAAA 60.202 37.500 0.00 0.00 0.00 2.69
2460 2556 3.311322 ACAAACTTGCGAACGAGAATGAA 59.689 39.130 0.00 0.00 0.00 2.57
2504 2606 4.749598 CCAACCCAGAAAGCAAAATTACAC 59.250 41.667 0.00 0.00 0.00 2.90
2515 2617 1.607148 GAACGAACCCAACCCAGAAAG 59.393 52.381 0.00 0.00 0.00 2.62
2518 2622 0.107831 CTGAACGAACCCAACCCAGA 59.892 55.000 0.00 0.00 0.00 3.86
2542 2650 3.890756 TCAGCAACAAGGACATGTCATTT 59.109 39.130 26.47 16.89 30.47 2.32
2545 2653 2.636647 TCAGCAACAAGGACATGTCA 57.363 45.000 26.47 0.00 31.81 3.58
2626 2734 1.202758 TGCCGATACATGGGATGGAAC 60.203 52.381 0.00 0.00 33.60 3.62
2627 2735 1.072173 CTGCCGATACATGGGATGGAA 59.928 52.381 0.00 0.00 33.60 3.53
2628 2736 0.686789 CTGCCGATACATGGGATGGA 59.313 55.000 0.00 0.00 33.60 3.41
2629 2737 0.397941 ACTGCCGATACATGGGATGG 59.602 55.000 0.00 0.00 33.60 3.51
2630 2738 3.264947 CATACTGCCGATACATGGGATG 58.735 50.000 0.00 0.00 0.00 3.51
2633 2741 2.839486 ACATACTGCCGATACATGGG 57.161 50.000 0.00 0.00 0.00 4.00
2708 2819 0.817229 TGCAACGCACTGTGAATGGA 60.817 50.000 12.86 5.07 31.71 3.41
2709 2820 0.030504 TTGCAACGCACTGTGAATGG 59.969 50.000 12.86 0.00 38.71 3.16
2711 2822 0.737804 TGTTGCAACGCACTGTGAAT 59.262 45.000 23.79 0.00 38.71 2.57
2714 2825 0.639756 GTTTGTTGCAACGCACTGTG 59.360 50.000 23.79 2.76 38.71 3.66
2721 2832 3.484886 CCATTGTTTGGTTTGTTGCAACG 60.485 43.478 23.79 5.31 40.99 4.10
2757 3011 2.841595 GCCCTAGACAGGCCATACT 58.158 57.895 5.01 2.88 45.16 2.12
2770 3024 1.216175 ACCCGTCTATACAGTGCCCTA 59.784 52.381 0.00 0.00 0.00 3.53
2773 3027 2.305009 AGTACCCGTCTATACAGTGCC 58.695 52.381 0.00 0.00 0.00 5.01
2775 3029 7.035840 ACAAATAGTACCCGTCTATACAGTG 57.964 40.000 0.00 0.00 0.00 3.66
2776 3030 7.340232 TGAACAAATAGTACCCGTCTATACAGT 59.660 37.037 0.00 0.00 0.00 3.55
2777 3031 7.646922 GTGAACAAATAGTACCCGTCTATACAG 59.353 40.741 0.00 0.00 0.00 2.74
2778 3032 7.416664 GGTGAACAAATAGTACCCGTCTATACA 60.417 40.741 0.00 0.00 0.00 2.29
2779 3033 6.920210 GGTGAACAAATAGTACCCGTCTATAC 59.080 42.308 0.00 0.00 0.00 1.47
2790 3927 7.334671 TGCAAATATCGTGGTGAACAAATAGTA 59.665 33.333 0.00 0.00 0.00 1.82
2796 3933 4.068599 TCTGCAAATATCGTGGTGAACAA 58.931 39.130 0.00 0.00 0.00 2.83
2800 3937 2.905075 CCTCTGCAAATATCGTGGTGA 58.095 47.619 0.00 0.00 0.00 4.02
2818 3955 3.327757 TCATCAGTAAAGGACACAAGCCT 59.672 43.478 0.00 0.00 37.35 4.58
2822 3959 5.924356 TGAAGTCATCAGTAAAGGACACAA 58.076 37.500 0.00 0.00 33.04 3.33
2825 3962 9.739276 ATAAATTGAAGTCATCAGTAAAGGACA 57.261 29.630 0.00 0.00 39.77 4.02
2837 3974 9.685276 TGGTTCAGATGTATAAATTGAAGTCAT 57.315 29.630 2.55 0.00 0.00 3.06
2838 3975 9.685276 ATGGTTCAGATGTATAAATTGAAGTCA 57.315 29.630 2.55 4.77 0.00 3.41
2841 3978 9.123902 TGGATGGTTCAGATGTATAAATTGAAG 57.876 33.333 2.55 0.00 0.00 3.02
2877 4056 8.915871 ATTGCTTTATTACACACATCATTGTC 57.084 30.769 0.00 0.00 32.34 3.18
2905 4084 9.360093 CGTCTGATTTTACTAGAGAACTCAAAT 57.640 33.333 0.00 1.63 0.00 2.32
2906 4085 7.813148 CCGTCTGATTTTACTAGAGAACTCAAA 59.187 37.037 0.00 0.00 0.00 2.69
2907 4086 7.313646 CCGTCTGATTTTACTAGAGAACTCAA 58.686 38.462 0.00 0.00 0.00 3.02
2908 4087 6.127703 CCCGTCTGATTTTACTAGAGAACTCA 60.128 42.308 0.00 0.23 0.00 3.41
2909 4088 6.095160 TCCCGTCTGATTTTACTAGAGAACTC 59.905 42.308 0.00 0.00 0.00 3.01
2910 4089 5.950549 TCCCGTCTGATTTTACTAGAGAACT 59.049 40.000 0.00 0.00 0.00 3.01
2911 4090 6.205101 TCCCGTCTGATTTTACTAGAGAAC 57.795 41.667 0.00 0.00 0.00 3.01
2912 4091 6.209986 TGTTCCCGTCTGATTTTACTAGAGAA 59.790 38.462 0.00 0.00 0.00 2.87
2913 4092 5.713389 TGTTCCCGTCTGATTTTACTAGAGA 59.287 40.000 0.00 0.00 0.00 3.10
2914 4093 5.805994 GTGTTCCCGTCTGATTTTACTAGAG 59.194 44.000 0.00 0.00 0.00 2.43
2915 4094 5.479375 AGTGTTCCCGTCTGATTTTACTAGA 59.521 40.000 0.00 0.00 0.00 2.43
2916 4095 5.721232 AGTGTTCCCGTCTGATTTTACTAG 58.279 41.667 0.00 0.00 0.00 2.57
2917 4096 5.733620 AGTGTTCCCGTCTGATTTTACTA 57.266 39.130 0.00 0.00 0.00 1.82
2918 4097 4.618920 AGTGTTCCCGTCTGATTTTACT 57.381 40.909 0.00 0.00 0.00 2.24
2919 4098 6.426025 ACTTAAGTGTTCCCGTCTGATTTTAC 59.574 38.462 7.48 0.00 0.00 2.01
2920 4099 6.527423 ACTTAAGTGTTCCCGTCTGATTTTA 58.473 36.000 7.48 0.00 0.00 1.52
2921 4100 5.374071 ACTTAAGTGTTCCCGTCTGATTTT 58.626 37.500 7.48 0.00 0.00 1.82
2922 4101 4.969484 ACTTAAGTGTTCCCGTCTGATTT 58.031 39.130 7.48 0.00 0.00 2.17
2923 4102 4.618920 ACTTAAGTGTTCCCGTCTGATT 57.381 40.909 7.48 0.00 0.00 2.57
2924 4103 4.315803 CAACTTAAGTGTTCCCGTCTGAT 58.684 43.478 9.34 0.00 0.00 2.90
2925 4104 3.493699 CCAACTTAAGTGTTCCCGTCTGA 60.494 47.826 9.34 0.00 0.00 3.27
2926 4105 2.806244 CCAACTTAAGTGTTCCCGTCTG 59.194 50.000 9.34 0.00 0.00 3.51
2927 4106 2.809299 GCCAACTTAAGTGTTCCCGTCT 60.809 50.000 9.34 0.00 0.00 4.18
2928 4107 1.534163 GCCAACTTAAGTGTTCCCGTC 59.466 52.381 9.34 0.00 0.00 4.79
2929 4108 1.142262 AGCCAACTTAAGTGTTCCCGT 59.858 47.619 9.34 0.00 0.00 5.28
2930 4109 1.892209 AGCCAACTTAAGTGTTCCCG 58.108 50.000 9.34 0.00 0.00 5.14
2931 4110 2.747989 GCTAGCCAACTTAAGTGTTCCC 59.252 50.000 9.34 0.00 0.00 3.97
2932 4111 2.747989 GGCTAGCCAACTTAAGTGTTCC 59.252 50.000 29.33 0.76 35.81 3.62
2933 4112 3.676093 AGGCTAGCCAACTTAAGTGTTC 58.324 45.455 34.70 3.04 38.92 3.18
2934 4113 3.790089 AGGCTAGCCAACTTAAGTGTT 57.210 42.857 34.70 7.25 38.92 3.32
2935 4114 6.749036 ATATAGGCTAGCCAACTTAAGTGT 57.251 37.500 34.70 13.03 38.92 3.55
2938 4117 9.482627 GCATATATATAGGCTAGCCAACTTAAG 57.517 37.037 34.70 16.91 37.12 1.85
2939 4118 8.988060 TGCATATATATAGGCTAGCCAACTTAA 58.012 33.333 34.70 15.89 40.42 1.85
2940 4119 8.547481 TGCATATATATAGGCTAGCCAACTTA 57.453 34.615 34.70 18.91 40.42 2.24
2941 4120 7.437713 TGCATATATATAGGCTAGCCAACTT 57.562 36.000 34.70 17.23 40.42 2.66
2942 4121 7.623999 ATGCATATATATAGGCTAGCCAACT 57.376 36.000 34.70 20.31 40.42 3.16
2959 4138 9.688091 CGGAGGGAGTACTATATATATGCATAT 57.312 37.037 22.31 22.31 0.00 1.78
2960 4139 8.666821 ACGGAGGGAGTACTATATATATGCATA 58.333 37.037 9.27 9.27 0.00 3.14
2961 4140 7.527796 ACGGAGGGAGTACTATATATATGCAT 58.472 38.462 3.79 3.79 0.00 3.96
2962 4141 6.907961 ACGGAGGGAGTACTATATATATGCA 58.092 40.000 5.44 0.00 0.00 3.96
2963 4142 7.040548 GGAACGGAGGGAGTACTATATATATGC 60.041 44.444 5.44 0.00 0.00 3.14
2964 4143 8.219178 AGGAACGGAGGGAGTACTATATATATG 58.781 40.741 5.44 0.00 0.00 1.78
2965 4144 8.347557 AGGAACGGAGGGAGTACTATATATAT 57.652 38.462 0.00 0.00 0.00 0.86
2966 4145 7.761981 AGGAACGGAGGGAGTACTATATATA 57.238 40.000 0.00 0.00 0.00 0.86
2967 4146 6.655376 AGGAACGGAGGGAGTACTATATAT 57.345 41.667 0.00 0.00 0.00 0.86
2968 4147 7.574021 TTAGGAACGGAGGGAGTACTATATA 57.426 40.000 0.00 0.00 0.00 0.86
2969 4148 6.460103 TTAGGAACGGAGGGAGTACTATAT 57.540 41.667 0.00 0.00 0.00 0.86
2970 4149 5.912149 TTAGGAACGGAGGGAGTACTATA 57.088 43.478 0.00 0.00 0.00 1.31
2971 4150 4.803329 TTAGGAACGGAGGGAGTACTAT 57.197 45.455 0.00 0.00 0.00 2.12
2972 4151 4.591321 TTTAGGAACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 0.00 1.82
2973 4152 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
2974 4153 3.450096 ACATTTAGGAACGGAGGGAGTAC 59.550 47.826 0.00 0.00 0.00 2.73
2975 4154 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
2976 4155 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
2977 4156 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
2978 4157 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
2979 4158 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2980 4159 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2981 4160 7.668525 AAAAGACTTACATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
3055 4234 9.606631 GGAGTAAAATGAGTGAATCTACATTCT 57.393 33.333 0.00 0.00 39.49 2.40
3056 4235 8.543774 CGGAGTAAAATGAGTGAATCTACATTC 58.456 37.037 0.00 0.00 39.24 2.67
3057 4236 7.011482 GCGGAGTAAAATGAGTGAATCTACATT 59.989 37.037 0.00 0.00 34.99 2.71
3058 4237 6.480320 GCGGAGTAAAATGAGTGAATCTACAT 59.520 38.462 0.00 0.00 0.00 2.29
3059 4238 5.810587 GCGGAGTAAAATGAGTGAATCTACA 59.189 40.000 0.00 0.00 0.00 2.74
3060 4239 5.810587 TGCGGAGTAAAATGAGTGAATCTAC 59.189 40.000 0.00 0.00 0.00 2.59
3061 4240 5.972935 TGCGGAGTAAAATGAGTGAATCTA 58.027 37.500 0.00 0.00 0.00 1.98
3062 4241 4.832248 TGCGGAGTAAAATGAGTGAATCT 58.168 39.130 0.00 0.00 0.00 2.40
3063 4242 5.065218 ACATGCGGAGTAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3064 4243 4.943705 ACATGCGGAGTAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3065 4244 4.323417 ACATGCGGAGTAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3066 4245 3.937814 ACATGCGGAGTAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3067 4246 4.870426 ACTACATGCGGAGTAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3068 4247 5.086104 ACTACATGCGGAGTAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3069 4248 4.508124 GGACTACATGCGGAGTAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
3070 4249 4.081365 TGGACTACATGCGGAGTAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
3071 4250 4.188462 TGGACTACATGCGGAGTAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
3072 4251 4.481368 TGGACTACATGCGGAGTAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
3073 4252 3.965379 TGGACTACATGCGGAGTAAAA 57.035 42.857 0.00 0.00 0.00 1.52
3074 4253 5.801531 ATATGGACTACATGCGGAGTAAA 57.198 39.130 0.00 0.00 40.82 2.01
3075 4254 5.801531 AATATGGACTACATGCGGAGTAA 57.198 39.130 0.00 0.00 40.82 2.24
3076 4255 6.904463 TTAATATGGACTACATGCGGAGTA 57.096 37.500 0.00 0.00 40.82 2.59
3077 4256 5.801531 TTAATATGGACTACATGCGGAGT 57.198 39.130 0.00 0.00 40.82 3.85
3078 4257 7.226720 AGTTTTTAATATGGACTACATGCGGAG 59.773 37.037 0.00 0.00 40.82 4.63
3079 4258 7.051623 AGTTTTTAATATGGACTACATGCGGA 58.948 34.615 0.00 0.00 40.82 5.54
3080 4259 7.226720 AGAGTTTTTAATATGGACTACATGCGG 59.773 37.037 0.00 0.00 40.82 5.69
3081 4260 8.142994 AGAGTTTTTAATATGGACTACATGCG 57.857 34.615 0.00 0.00 40.82 4.73
3108 4287 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
3109 4288 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3110 4289 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3111 4290 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3112 4291 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3113 4292 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3114 4293 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3117 4296 9.643735 CTATATACTCCCTCCGTTCCTAAATAT 57.356 37.037 0.00 0.00 0.00 1.28
3118 4297 8.057623 CCTATATACTCCCTCCGTTCCTAAATA 58.942 40.741 0.00 0.00 0.00 1.40
3119 4298 6.896307 CCTATATACTCCCTCCGTTCCTAAAT 59.104 42.308 0.00 0.00 0.00 1.40
3120 4299 6.045931 TCCTATATACTCCCTCCGTTCCTAAA 59.954 42.308 0.00 0.00 0.00 1.85
3121 4300 5.553162 TCCTATATACTCCCTCCGTTCCTAA 59.447 44.000 0.00 0.00 0.00 2.69
3122 4301 5.103687 TCCTATATACTCCCTCCGTTCCTA 58.896 45.833 0.00 0.00 0.00 2.94
3123 4302 3.921486 TCCTATATACTCCCTCCGTTCCT 59.079 47.826 0.00 0.00 0.00 3.36
3124 4303 4.271661 CTCCTATATACTCCCTCCGTTCC 58.728 52.174 0.00 0.00 0.00 3.62
3125 4304 3.695556 GCTCCTATATACTCCCTCCGTTC 59.304 52.174 0.00 0.00 0.00 3.95
3126 4305 3.075582 TGCTCCTATATACTCCCTCCGTT 59.924 47.826 0.00 0.00 0.00 4.44
3127 4306 2.648304 TGCTCCTATATACTCCCTCCGT 59.352 50.000 0.00 0.00 0.00 4.69
3128 4307 3.283751 CTGCTCCTATATACTCCCTCCG 58.716 54.545 0.00 0.00 0.00 4.63
3129 4308 4.325084 ACTGCTCCTATATACTCCCTCC 57.675 50.000 0.00 0.00 0.00 4.30
3130 4309 5.300792 GCATACTGCTCCTATATACTCCCTC 59.699 48.000 0.00 0.00 40.96 4.30
3131 4310 5.205056 GCATACTGCTCCTATATACTCCCT 58.795 45.833 0.00 0.00 40.96 4.20
3132 4311 4.956700 TGCATACTGCTCCTATATACTCCC 59.043 45.833 0.34 0.00 45.31 4.30
3133 4312 6.322456 TCATGCATACTGCTCCTATATACTCC 59.678 42.308 0.00 0.00 45.31 3.85
3134 4313 7.148000 TGTCATGCATACTGCTCCTATATACTC 60.148 40.741 0.00 0.00 45.31 2.59
3135 4314 6.665248 TGTCATGCATACTGCTCCTATATACT 59.335 38.462 0.00 0.00 45.31 2.12
3136 4315 6.867550 TGTCATGCATACTGCTCCTATATAC 58.132 40.000 0.00 0.00 45.31 1.47
3137 4316 7.323420 GTTGTCATGCATACTGCTCCTATATA 58.677 38.462 0.00 0.00 45.31 0.86
3138 4317 6.169094 GTTGTCATGCATACTGCTCCTATAT 58.831 40.000 0.00 0.00 45.31 0.86
3139 4318 5.511373 GGTTGTCATGCATACTGCTCCTATA 60.511 44.000 0.00 0.00 45.31 1.31
3140 4319 4.384056 GTTGTCATGCATACTGCTCCTAT 58.616 43.478 0.00 0.00 45.31 2.57
3141 4320 3.432186 GGTTGTCATGCATACTGCTCCTA 60.432 47.826 0.00 0.00 45.31 2.94
3142 4321 2.636830 GTTGTCATGCATACTGCTCCT 58.363 47.619 0.00 0.00 45.31 3.69
3147 4478 4.142609 ACCTAGGTTGTCATGCATACTG 57.857 45.455 9.21 0.00 0.00 2.74
3175 4506 1.499007 ACACCACCCATTCCTCTTGTT 59.501 47.619 0.00 0.00 0.00 2.83
3222 4631 1.610624 GGCCCTGAAACGACAGATTCA 60.611 52.381 0.00 0.00 39.94 2.57
3230 4639 4.697756 CGGCTGGCCCTGAAACGA 62.698 66.667 0.00 0.00 0.00 3.85
3257 4666 1.280457 CAGAGGGCCTCTACAACCTT 58.720 55.000 34.60 8.91 38.99 3.50
3276 4685 0.326264 ACCTGTTCCTCATCTGGCAC 59.674 55.000 0.00 0.00 0.00 5.01
3277 4686 1.951209 TACCTGTTCCTCATCTGGCA 58.049 50.000 0.00 0.00 0.00 4.92
3278 4687 2.633488 GTTACCTGTTCCTCATCTGGC 58.367 52.381 0.00 0.00 0.00 4.85
3279 4688 2.571653 TGGTTACCTGTTCCTCATCTGG 59.428 50.000 2.07 0.00 0.00 3.86
3280 4689 3.981071 TGGTTACCTGTTCCTCATCTG 57.019 47.619 2.07 0.00 0.00 2.90
3283 4692 6.575244 TCATAATGGTTACCTGTTCCTCAT 57.425 37.500 2.07 0.00 0.00 2.90
3287 4696 8.918202 TCATATTCATAATGGTTACCTGTTCC 57.082 34.615 2.07 0.00 0.00 3.62
3290 4699 9.866655 AACATCATATTCATAATGGTTACCTGT 57.133 29.630 2.07 0.00 0.00 4.00
3296 4705 8.362639 GGCTTGAACATCATATTCATAATGGTT 58.637 33.333 0.00 0.00 36.02 3.67
3299 4708 9.622004 GAAGGCTTGAACATCATATTCATAATG 57.378 33.333 3.46 0.00 36.02 1.90
3344 4753 1.155042 CAAGCAGCAGAAGGAGACAC 58.845 55.000 0.00 0.00 0.00 3.67
3345 4754 0.761187 ACAAGCAGCAGAAGGAGACA 59.239 50.000 0.00 0.00 0.00 3.41
3353 4762 2.610433 CAGAATACGACAAGCAGCAGA 58.390 47.619 0.00 0.00 0.00 4.26
3359 4768 1.438651 TGTGGCAGAATACGACAAGC 58.561 50.000 0.00 0.00 0.00 4.01
3360 4769 2.352651 CCATGTGGCAGAATACGACAAG 59.647 50.000 0.00 0.00 0.00 3.16
3361 4770 2.290008 ACCATGTGGCAGAATACGACAA 60.290 45.455 0.00 0.00 39.32 3.18
3362 4771 1.277842 ACCATGTGGCAGAATACGACA 59.722 47.619 0.00 0.00 39.32 4.35
3363 4772 1.933853 GACCATGTGGCAGAATACGAC 59.066 52.381 0.00 0.00 39.32 4.34
3364 4773 1.470805 CGACCATGTGGCAGAATACGA 60.471 52.381 0.00 0.00 39.32 3.43
3365 4774 0.930310 CGACCATGTGGCAGAATACG 59.070 55.000 0.00 0.00 39.32 3.06
3366 4775 2.024176 ACGACCATGTGGCAGAATAC 57.976 50.000 0.00 0.00 39.32 1.89
3372 4781 2.983030 GGCAACGACCATGTGGCA 60.983 61.111 0.00 0.00 40.73 4.92
3407 4816 5.885230 TTCATCGAATTCTTGATGTGCTT 57.115 34.783 17.59 0.00 42.05 3.91
3408 4817 5.413833 ACTTTCATCGAATTCTTGATGTGCT 59.586 36.000 17.59 3.29 42.05 4.40
3409 4818 5.634896 ACTTTCATCGAATTCTTGATGTGC 58.365 37.500 17.59 0.00 42.05 4.57
3410 4819 7.069852 AGACTTTCATCGAATTCTTGATGTG 57.930 36.000 17.59 13.12 42.05 3.21
3411 4820 7.678947 AAGACTTTCATCGAATTCTTGATGT 57.321 32.000 17.59 14.03 42.05 3.06
3412 4821 7.008086 GCAAAGACTTTCATCGAATTCTTGATG 59.992 37.037 14.02 14.02 42.61 3.07
3413 4822 7.025963 GCAAAGACTTTCATCGAATTCTTGAT 58.974 34.615 3.52 0.00 30.09 2.57
3414 4823 6.205464 AGCAAAGACTTTCATCGAATTCTTGA 59.795 34.615 3.52 4.02 30.09 3.02
3415 4824 6.304922 CAGCAAAGACTTTCATCGAATTCTTG 59.695 38.462 3.52 1.59 30.09 3.02
3416 4825 6.376978 CAGCAAAGACTTTCATCGAATTCTT 58.623 36.000 3.52 0.00 30.52 2.52
3417 4826 5.106396 CCAGCAAAGACTTTCATCGAATTCT 60.106 40.000 3.52 0.00 0.00 2.40
3418 4827 5.091431 CCAGCAAAGACTTTCATCGAATTC 58.909 41.667 0.00 0.00 0.00 2.17
3419 4828 4.520492 ACCAGCAAAGACTTTCATCGAATT 59.480 37.500 0.00 0.00 0.00 2.17
3420 4829 4.074970 ACCAGCAAAGACTTTCATCGAAT 58.925 39.130 0.00 0.00 0.00 3.34
3421 4830 3.476552 ACCAGCAAAGACTTTCATCGAA 58.523 40.909 0.00 0.00 0.00 3.71
3422 4831 3.126001 ACCAGCAAAGACTTTCATCGA 57.874 42.857 0.00 0.00 0.00 3.59
3423 4832 3.904136 AACCAGCAAAGACTTTCATCG 57.096 42.857 0.00 0.00 0.00 3.84
3424 4833 4.209911 GCAAAACCAGCAAAGACTTTCATC 59.790 41.667 0.00 0.00 0.00 2.92
3425 4834 4.122046 GCAAAACCAGCAAAGACTTTCAT 58.878 39.130 0.00 0.00 0.00 2.57
3426 4835 3.056250 TGCAAAACCAGCAAAGACTTTCA 60.056 39.130 0.00 0.00 39.39 2.69
3427 4836 3.520569 TGCAAAACCAGCAAAGACTTTC 58.479 40.909 0.00 0.00 39.39 2.62
3428 4837 3.608316 TGCAAAACCAGCAAAGACTTT 57.392 38.095 0.00 0.00 39.39 2.66
3429 4838 3.825143 ATGCAAAACCAGCAAAGACTT 57.175 38.095 0.00 0.00 46.27 3.01
3430 4839 3.132646 TGAATGCAAAACCAGCAAAGACT 59.867 39.130 0.00 0.00 46.27 3.24
3431 4840 3.456280 TGAATGCAAAACCAGCAAAGAC 58.544 40.909 0.00 0.00 46.27 3.01
3432 4841 3.815856 TGAATGCAAAACCAGCAAAGA 57.184 38.095 0.00 0.00 46.27 2.52
3433 4842 4.398549 CATGAATGCAAAACCAGCAAAG 57.601 40.909 0.00 0.00 46.27 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.