Multiple sequence alignment - TraesCS5D01G330000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G330000 chr5D 100.000 2656 0 0 276 2931 421642676 421640021 0.000000e+00 4905.0
1 TraesCS5D01G330000 chr5D 91.304 115 7 3 575 686 539613180 539613294 1.410000e-33 154.0
2 TraesCS5D01G330000 chr5D 100.000 31 0 0 1 31 421642951 421642921 1.130000e-04 58.4
3 TraesCS5D01G330000 chr5A 86.430 1098 75 27 867 1933 535225433 535224379 0.000000e+00 1134.0
4 TraesCS5D01G330000 chr5A 81.694 366 24 13 2333 2683 535223880 535223543 6.230000e-67 265.0
5 TraesCS5D01G330000 chr5A 88.710 186 9 8 694 870 535227498 535227316 1.770000e-52 217.0
6 TraesCS5D01G330000 chr5B 90.788 673 50 7 971 1633 507979711 507979041 0.000000e+00 889.0
7 TraesCS5D01G330000 chr5B 83.166 796 63 28 1883 2622 507954750 507953970 0.000000e+00 662.0
8 TraesCS5D01G330000 chr5B 90.614 277 21 3 2658 2929 507953962 507953686 2.150000e-96 363.0
9 TraesCS5D01G330000 chr5B 88.688 221 21 4 1639 1858 507978747 507978530 1.730000e-67 267.0
10 TraesCS5D01G330000 chr5B 90.863 197 15 2 276 472 507991115 507990922 8.060000e-66 261.0
11 TraesCS5D01G330000 chr5B 97.980 99 2 0 823 921 507979808 507979710 3.880000e-39 172.0
12 TraesCS5D01G330000 chr5B 90.435 115 8 3 467 578 631947229 631947343 6.540000e-32 148.0
13 TraesCS5D01G330000 chr5B 89.720 107 8 3 719 824 507985775 507985671 1.830000e-27 134.0
14 TraesCS5D01G330000 chr1B 78.851 383 59 14 1221 1588 673926152 673926527 3.780000e-59 239.0
15 TraesCS5D01G330000 chr1B 91.964 112 7 2 579 690 8601880 8601989 3.910000e-34 156.0
16 TraesCS5D01G330000 chr2A 86.792 212 21 5 467 671 180101975 180102186 2.270000e-56 230.0
17 TraesCS5D01G330000 chr2A 88.393 112 12 1 468 578 620676121 620676010 1.830000e-27 134.0
18 TraesCS5D01G330000 chr1A 77.428 381 65 13 1223 1588 580925662 580926036 1.060000e-49 207.0
19 TraesCS5D01G330000 chr1D 76.429 420 74 16 1223 1625 483902233 483902644 1.380000e-48 204.0
20 TraesCS5D01G330000 chr2D 85.714 189 24 3 468 655 36788561 36788375 2.300000e-46 196.0
21 TraesCS5D01G330000 chr2D 97.872 94 2 0 579 672 649373735 649373828 2.340000e-36 163.0
22 TraesCS5D01G330000 chr2D 89.744 117 8 3 552 668 629054939 629055051 2.350000e-31 147.0
23 TraesCS5D01G330000 chr2D 90.265 113 8 1 466 578 417546502 417546611 8.470000e-31 145.0
24 TraesCS5D01G330000 chr3B 85.052 194 22 4 480 670 168121803 168121614 1.070000e-44 191.0
25 TraesCS5D01G330000 chr6D 83.333 216 25 9 467 672 453001843 453002057 3.860000e-44 189.0
26 TraesCS5D01G330000 chr6D 89.720 107 9 2 468 573 418629814 418629709 5.100000e-28 135.0
27 TraesCS5D01G330000 chr6B 88.983 118 13 0 552 669 109141046 109141163 2.350000e-31 147.0
28 TraesCS5D01G330000 chr3A 88.793 116 9 4 466 578 703404296 703404182 3.940000e-29 139.0
29 TraesCS5D01G330000 chr7A 90.385 52 5 0 2143 2194 48692378 48692429 5.240000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G330000 chr5D 421640021 421642951 2930 True 2481.700000 4905 100.000000 1 2931 2 chr5D.!!$R1 2930
1 TraesCS5D01G330000 chr5A 535223543 535227498 3955 True 538.666667 1134 85.611333 694 2683 3 chr5A.!!$R1 1989
2 TraesCS5D01G330000 chr5B 507953686 507954750 1064 True 512.500000 662 86.890000 1883 2929 2 chr5B.!!$R3 1046
3 TraesCS5D01G330000 chr5B 507978530 507979808 1278 True 442.666667 889 92.485333 823 1858 3 chr5B.!!$R4 1035

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 578 0.034059 ACCTCTGAAAGACTGTGCCG 59.966 55.0 0.0 0.0 38.67 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2167 4445 0.179108 CGGTCAGCCTGGTAAGCTAC 60.179 60.0 0.0 0.0 38.95 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
312 313 2.415697 AAAAGACGCATTCAAACCGG 57.584 45.000 0.00 0.00 0.00 5.28
313 314 0.039527 AAAGACGCATTCAAACCGGC 60.040 50.000 0.00 0.00 0.00 6.13
317 318 4.458164 GCATTCAAACCGGCGAAG 57.542 55.556 9.30 0.00 0.00 3.79
318 319 1.579429 GCATTCAAACCGGCGAAGT 59.421 52.632 9.30 0.00 0.00 3.01
319 320 0.729140 GCATTCAAACCGGCGAAGTG 60.729 55.000 9.30 2.51 0.00 3.16
320 321 0.871722 CATTCAAACCGGCGAAGTGA 59.128 50.000 9.30 5.27 0.00 3.41
321 322 1.468520 CATTCAAACCGGCGAAGTGAT 59.531 47.619 9.30 0.00 0.00 3.06
322 323 1.153353 TTCAAACCGGCGAAGTGATC 58.847 50.000 9.30 0.00 0.00 2.92
341 342 3.169924 CGTACGAGCGAGCGCAAA 61.170 61.111 17.68 0.00 44.88 3.68
342 343 2.712918 CGTACGAGCGAGCGCAAAA 61.713 57.895 17.68 0.00 44.88 2.44
343 344 1.489824 GTACGAGCGAGCGCAAAAA 59.510 52.632 17.68 0.00 44.88 1.94
364 365 1.182667 AAAAGATAAACAGGCCGGCC 58.817 50.000 39.29 39.29 0.00 6.13
365 366 0.039035 AAAGATAAACAGGCCGGCCA 59.961 50.000 45.13 26.77 38.92 5.36
366 367 0.039035 AAGATAAACAGGCCGGCCAA 59.961 50.000 45.13 25.30 38.92 4.52
367 368 0.039035 AGATAAACAGGCCGGCCAAA 59.961 50.000 45.13 25.66 38.92 3.28
368 369 1.111277 GATAAACAGGCCGGCCAAAT 58.889 50.000 45.13 28.87 38.92 2.32
369 370 1.480545 GATAAACAGGCCGGCCAAATT 59.519 47.619 45.13 34.30 38.92 1.82
370 371 0.605589 TAAACAGGCCGGCCAAATTG 59.394 50.000 45.13 35.09 38.92 2.32
371 372 2.730066 AAACAGGCCGGCCAAATTGC 62.730 55.000 45.13 18.64 38.92 3.56
372 373 3.384532 CAGGCCGGCCAAATTGCT 61.385 61.111 45.13 22.35 38.92 3.91
373 374 2.051518 CAGGCCGGCCAAATTGCTA 61.052 57.895 45.13 0.00 38.92 3.49
374 375 1.076044 AGGCCGGCCAAATTGCTAT 60.076 52.632 45.13 20.69 38.92 2.97
375 376 0.687427 AGGCCGGCCAAATTGCTATT 60.687 50.000 45.13 19.86 38.92 1.73
376 377 0.249447 GGCCGGCCAAATTGCTATTC 60.249 55.000 40.73 7.78 35.81 1.75
377 378 0.459489 GCCGGCCAAATTGCTATTCA 59.541 50.000 18.11 0.00 0.00 2.57
378 379 1.134848 GCCGGCCAAATTGCTATTCAA 60.135 47.619 18.11 0.00 39.32 2.69
379 380 2.813061 CCGGCCAAATTGCTATTCAAG 58.187 47.619 2.24 0.00 38.22 3.02
380 381 2.481795 CCGGCCAAATTGCTATTCAAGG 60.482 50.000 2.24 0.00 38.22 3.61
381 382 2.481795 CGGCCAAATTGCTATTCAAGGG 60.482 50.000 2.24 0.00 38.22 3.95
382 383 2.765699 GGCCAAATTGCTATTCAAGGGA 59.234 45.455 0.00 0.00 38.22 4.20
383 384 3.197549 GGCCAAATTGCTATTCAAGGGAA 59.802 43.478 0.00 0.00 38.22 3.97
384 385 4.323409 GGCCAAATTGCTATTCAAGGGAAA 60.323 41.667 0.00 0.00 38.22 3.13
385 386 5.244755 GCCAAATTGCTATTCAAGGGAAAA 58.755 37.500 0.00 0.00 38.22 2.29
386 387 5.704978 GCCAAATTGCTATTCAAGGGAAAAA 59.295 36.000 0.00 0.00 38.22 1.94
387 388 6.128200 GCCAAATTGCTATTCAAGGGAAAAAG 60.128 38.462 0.00 0.00 38.22 2.27
388 389 6.936335 CCAAATTGCTATTCAAGGGAAAAAGT 59.064 34.615 0.00 0.00 38.22 2.66
389 390 7.118245 CCAAATTGCTATTCAAGGGAAAAAGTC 59.882 37.037 0.00 0.00 38.22 3.01
390 391 6.286240 ATTGCTATTCAAGGGAAAAAGTCC 57.714 37.500 0.00 0.00 40.15 3.85
391 392 4.998051 TGCTATTCAAGGGAAAAAGTCCT 58.002 39.130 0.00 0.00 46.92 3.85
392 393 5.393866 TGCTATTCAAGGGAAAAAGTCCTT 58.606 37.500 0.00 0.00 46.92 3.36
393 394 5.476945 TGCTATTCAAGGGAAAAAGTCCTTC 59.523 40.000 0.00 0.00 46.92 3.46
394 395 5.476945 GCTATTCAAGGGAAAAAGTCCTTCA 59.523 40.000 0.00 0.00 46.92 3.02
395 396 6.349694 GCTATTCAAGGGAAAAAGTCCTTCAG 60.350 42.308 0.00 0.00 46.92 3.02
396 397 3.832527 TCAAGGGAAAAAGTCCTTCAGG 58.167 45.455 0.00 0.00 46.92 3.86
397 398 2.294449 AGGGAAAAAGTCCTTCAGGC 57.706 50.000 0.00 0.00 46.92 4.85
398 399 0.881796 GGGAAAAAGTCCTTCAGGCG 59.118 55.000 0.00 0.00 46.92 5.52
399 400 1.544759 GGGAAAAAGTCCTTCAGGCGA 60.545 52.381 0.00 0.00 46.92 5.54
400 401 1.807142 GGAAAAAGTCCTTCAGGCGAG 59.193 52.381 0.00 0.00 43.98 5.03
401 402 2.550208 GGAAAAAGTCCTTCAGGCGAGA 60.550 50.000 0.00 0.00 43.98 4.04
402 403 2.464157 AAAAGTCCTTCAGGCGAGAG 57.536 50.000 0.00 0.00 34.44 3.20
403 404 1.633774 AAAGTCCTTCAGGCGAGAGA 58.366 50.000 0.00 0.00 34.44 3.10
404 405 1.633774 AAGTCCTTCAGGCGAGAGAA 58.366 50.000 0.00 0.00 34.44 2.87
405 406 1.181786 AGTCCTTCAGGCGAGAGAAG 58.818 55.000 0.00 0.00 40.64 2.85
406 407 0.459411 GTCCTTCAGGCGAGAGAAGC 60.459 60.000 0.00 0.00 39.85 3.86
407 408 0.613292 TCCTTCAGGCGAGAGAAGCT 60.613 55.000 0.00 0.00 39.85 3.74
408 409 1.107114 CCTTCAGGCGAGAGAAGCTA 58.893 55.000 0.00 0.00 39.85 3.32
409 410 1.478510 CCTTCAGGCGAGAGAAGCTAA 59.521 52.381 0.00 0.00 39.85 3.09
410 411 2.481104 CCTTCAGGCGAGAGAAGCTAAG 60.481 54.545 0.00 0.00 39.85 2.18
411 412 1.107114 TCAGGCGAGAGAAGCTAAGG 58.893 55.000 0.00 0.00 34.52 2.69
412 413 1.107114 CAGGCGAGAGAAGCTAAGGA 58.893 55.000 0.00 0.00 34.52 3.36
413 414 1.107945 AGGCGAGAGAAGCTAAGGAC 58.892 55.000 0.00 0.00 34.52 3.85
414 415 1.107945 GGCGAGAGAAGCTAAGGACT 58.892 55.000 0.00 0.00 34.52 3.85
415 416 1.066454 GGCGAGAGAAGCTAAGGACTC 59.934 57.143 0.00 0.00 34.52 3.36
416 417 1.268335 GCGAGAGAAGCTAAGGACTCG 60.268 57.143 17.73 17.73 46.11 4.18
417 418 1.268335 CGAGAGAAGCTAAGGACTCGC 60.268 57.143 12.82 0.00 40.03 5.03
418 419 1.746220 GAGAGAAGCTAAGGACTCGCA 59.254 52.381 0.00 0.00 34.98 5.10
419 420 1.474879 AGAGAAGCTAAGGACTCGCAC 59.525 52.381 0.00 0.00 34.98 5.34
420 421 1.202582 GAGAAGCTAAGGACTCGCACA 59.797 52.381 0.00 0.00 0.00 4.57
421 422 1.618837 AGAAGCTAAGGACTCGCACAA 59.381 47.619 0.00 0.00 0.00 3.33
422 423 2.037251 AGAAGCTAAGGACTCGCACAAA 59.963 45.455 0.00 0.00 0.00 2.83
423 424 2.086054 AGCTAAGGACTCGCACAAAG 57.914 50.000 0.00 0.00 0.00 2.77
424 425 0.444260 GCTAAGGACTCGCACAAAGC 59.556 55.000 0.00 0.00 40.87 3.51
433 434 2.980233 GCACAAAGCGGCTCCTGT 60.980 61.111 1.45 7.43 0.00 4.00
434 435 1.671054 GCACAAAGCGGCTCCTGTA 60.671 57.895 14.98 0.00 0.00 2.74
435 436 1.912371 GCACAAAGCGGCTCCTGTAC 61.912 60.000 14.98 8.10 0.00 2.90
436 437 1.003718 ACAAAGCGGCTCCTGTACC 60.004 57.895 14.09 0.00 0.00 3.34
441 442 3.834799 CGGCTCCTGTACCGGGTC 61.835 72.222 6.32 0.00 45.74 4.46
442 443 2.363925 GGCTCCTGTACCGGGTCT 60.364 66.667 6.32 0.00 0.00 3.85
443 444 2.424733 GGCTCCTGTACCGGGTCTC 61.425 68.421 6.32 0.00 0.00 3.36
444 445 1.681327 GCTCCTGTACCGGGTCTCA 60.681 63.158 6.32 3.77 0.00 3.27
445 446 1.043673 GCTCCTGTACCGGGTCTCAT 61.044 60.000 6.32 0.00 0.00 2.90
446 447 1.486211 CTCCTGTACCGGGTCTCATT 58.514 55.000 6.32 0.00 0.00 2.57
447 448 1.409427 CTCCTGTACCGGGTCTCATTC 59.591 57.143 6.32 0.00 0.00 2.67
448 449 0.464452 CCTGTACCGGGTCTCATTCC 59.536 60.000 6.32 0.00 0.00 3.01
449 450 1.191535 CTGTACCGGGTCTCATTCCA 58.808 55.000 6.32 0.00 0.00 3.53
450 451 1.762957 CTGTACCGGGTCTCATTCCAT 59.237 52.381 6.32 0.00 0.00 3.41
451 452 1.484653 TGTACCGGGTCTCATTCCATG 59.515 52.381 6.32 0.00 0.00 3.66
452 453 1.128200 TACCGGGTCTCATTCCATGG 58.872 55.000 4.97 4.97 0.00 3.66
453 454 1.526917 CCGGGTCTCATTCCATGGC 60.527 63.158 6.96 0.00 0.00 4.40
454 455 1.528824 CGGGTCTCATTCCATGGCT 59.471 57.895 6.96 0.00 0.00 4.75
455 456 0.107017 CGGGTCTCATTCCATGGCTT 60.107 55.000 6.96 0.00 0.00 4.35
456 457 1.683011 CGGGTCTCATTCCATGGCTTT 60.683 52.381 6.96 0.00 0.00 3.51
457 458 2.421388 CGGGTCTCATTCCATGGCTTTA 60.421 50.000 6.96 0.00 0.00 1.85
458 459 3.748668 CGGGTCTCATTCCATGGCTTTAT 60.749 47.826 6.96 0.00 0.00 1.40
459 460 3.571401 GGGTCTCATTCCATGGCTTTATG 59.429 47.826 6.96 8.11 0.00 1.90
460 461 4.210331 GGTCTCATTCCATGGCTTTATGT 58.790 43.478 6.96 0.00 0.00 2.29
461 462 4.037208 GGTCTCATTCCATGGCTTTATGTG 59.963 45.833 6.96 8.84 0.00 3.21
462 463 4.641989 GTCTCATTCCATGGCTTTATGTGT 59.358 41.667 6.96 0.00 0.00 3.72
463 464 5.822519 GTCTCATTCCATGGCTTTATGTGTA 59.177 40.000 6.96 0.00 0.00 2.90
464 465 5.822519 TCTCATTCCATGGCTTTATGTGTAC 59.177 40.000 6.96 0.00 0.00 2.90
465 466 5.504853 TCATTCCATGGCTTTATGTGTACA 58.495 37.500 6.96 0.00 0.00 2.90
466 467 6.128486 TCATTCCATGGCTTTATGTGTACAT 58.872 36.000 6.96 2.75 40.22 2.29
467 468 6.606796 TCATTCCATGGCTTTATGTGTACATT 59.393 34.615 6.96 0.00 37.76 2.71
468 469 6.849085 TTCCATGGCTTTATGTGTACATTT 57.151 33.333 6.96 0.00 37.76 2.32
469 470 6.849085 TCCATGGCTTTATGTGTACATTTT 57.151 33.333 6.96 0.00 37.76 1.82
470 471 7.238486 TCCATGGCTTTATGTGTACATTTTT 57.762 32.000 6.96 0.00 37.76 1.94
491 492 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
493 494 1.217882 AACACAGTACAGACGCAAGC 58.782 50.000 0.00 0.00 45.62 4.01
494 495 0.939577 ACACAGTACAGACGCAAGCG 60.940 55.000 13.50 13.50 46.03 4.68
495 496 2.022129 ACAGTACAGACGCAAGCGC 61.022 57.895 15.09 0.00 44.19 5.92
496 497 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
497 498 1.006102 AGTACAGACGCAAGCGCTT 60.006 52.632 18.98 18.98 44.19 4.68
498 499 0.242825 AGTACAGACGCAAGCGCTTA 59.757 50.000 24.55 0.72 44.19 3.09
499 500 1.135083 AGTACAGACGCAAGCGCTTAT 60.135 47.619 24.55 11.59 44.19 1.73
500 501 2.098607 AGTACAGACGCAAGCGCTTATA 59.901 45.455 24.55 4.12 44.19 0.98
501 502 2.225068 ACAGACGCAAGCGCTTATAT 57.775 45.000 24.55 10.78 44.19 0.86
502 503 3.364889 ACAGACGCAAGCGCTTATATA 57.635 42.857 24.55 0.00 44.19 0.86
503 504 3.050619 ACAGACGCAAGCGCTTATATAC 58.949 45.455 24.55 13.11 44.19 1.47
504 505 3.049912 CAGACGCAAGCGCTTATATACA 58.950 45.455 24.55 0.00 44.19 2.29
505 506 3.675225 CAGACGCAAGCGCTTATATACAT 59.325 43.478 24.55 4.09 44.19 2.29
506 507 3.675225 AGACGCAAGCGCTTATATACATG 59.325 43.478 24.55 9.91 44.19 3.21
507 508 2.157668 ACGCAAGCGCTTATATACATGC 59.842 45.455 24.55 18.90 44.19 4.06
515 516 4.811208 CGCTTATATACATGCGCATACAC 58.189 43.478 24.84 4.36 41.85 2.90
516 517 4.562789 CGCTTATATACATGCGCATACACT 59.437 41.667 24.84 10.63 41.85 3.55
517 518 5.062183 CGCTTATATACATGCGCATACACTT 59.938 40.000 24.84 10.82 41.85 3.16
518 519 6.252655 CGCTTATATACATGCGCATACACTTA 59.747 38.462 24.84 10.91 41.85 2.24
519 520 7.043391 CGCTTATATACATGCGCATACACTTAT 60.043 37.037 24.84 16.67 41.85 1.73
520 521 8.604035 GCTTATATACATGCGCATACACTTATT 58.396 33.333 24.84 6.05 0.00 1.40
522 523 9.869757 TTATATACATGCGCATACACTTATTCT 57.130 29.630 24.84 8.28 0.00 2.40
523 524 8.777865 ATATACATGCGCATACACTTATTCTT 57.222 30.769 24.84 0.00 0.00 2.52
524 525 9.869757 ATATACATGCGCATACACTTATTCTTA 57.130 29.630 24.84 0.99 0.00 2.10
525 526 8.777865 ATACATGCGCATACACTTATTCTTAT 57.222 30.769 24.84 0.00 0.00 1.73
526 527 9.869757 ATACATGCGCATACACTTATTCTTATA 57.130 29.630 24.84 0.00 0.00 0.98
527 528 8.601845 ACATGCGCATACACTTATTCTTATAA 57.398 30.769 24.84 0.00 0.00 0.98
528 529 9.051679 ACATGCGCATACACTTATTCTTATAAA 57.948 29.630 24.84 0.00 0.00 1.40
529 530 9.318041 CATGCGCATACACTTATTCTTATAAAC 57.682 33.333 24.84 0.00 0.00 2.01
530 531 7.560700 TGCGCATACACTTATTCTTATAAACG 58.439 34.615 5.66 0.00 0.00 3.60
531 532 6.515340 GCGCATACACTTATTCTTATAAACGC 59.485 38.462 0.30 0.00 0.00 4.84
532 533 7.560700 CGCATACACTTATTCTTATAAACGCA 58.439 34.615 0.00 0.00 0.00 5.24
533 534 7.526186 CGCATACACTTATTCTTATAAACGCAC 59.474 37.037 0.00 0.00 0.00 5.34
534 535 8.332464 GCATACACTTATTCTTATAAACGCACA 58.668 33.333 0.00 0.00 0.00 4.57
535 536 9.632969 CATACACTTATTCTTATAAACGCACAC 57.367 33.333 0.00 0.00 0.00 3.82
536 537 7.661127 ACACTTATTCTTATAAACGCACACA 57.339 32.000 0.00 0.00 0.00 3.72
537 538 8.263940 ACACTTATTCTTATAAACGCACACAT 57.736 30.769 0.00 0.00 0.00 3.21
538 539 8.175069 ACACTTATTCTTATAAACGCACACATG 58.825 33.333 0.00 0.00 0.00 3.21
550 551 1.382522 CACACATGCACACCCTATCC 58.617 55.000 0.00 0.00 0.00 2.59
551 552 1.065199 CACACATGCACACCCTATCCT 60.065 52.381 0.00 0.00 0.00 3.24
552 553 2.170397 CACACATGCACACCCTATCCTA 59.830 50.000 0.00 0.00 0.00 2.94
553 554 3.048600 ACACATGCACACCCTATCCTAT 58.951 45.455 0.00 0.00 0.00 2.57
554 555 3.181451 ACACATGCACACCCTATCCTATG 60.181 47.826 0.00 0.00 0.00 2.23
555 556 3.071457 CACATGCACACCCTATCCTATGA 59.929 47.826 0.00 0.00 0.00 2.15
556 557 3.326006 ACATGCACACCCTATCCTATGAG 59.674 47.826 0.00 0.00 0.00 2.90
557 558 1.694150 TGCACACCCTATCCTATGAGC 59.306 52.381 0.00 0.00 0.00 4.26
558 559 1.694150 GCACACCCTATCCTATGAGCA 59.306 52.381 0.00 0.00 0.00 4.26
559 560 2.548920 GCACACCCTATCCTATGAGCAC 60.549 54.545 0.00 0.00 0.00 4.40
560 561 2.037772 CACACCCTATCCTATGAGCACC 59.962 54.545 0.00 0.00 0.00 5.01
561 562 2.090494 ACACCCTATCCTATGAGCACCT 60.090 50.000 0.00 0.00 0.00 4.00
562 563 2.564947 CACCCTATCCTATGAGCACCTC 59.435 54.545 0.00 0.00 0.00 3.85
563 564 2.452823 ACCCTATCCTATGAGCACCTCT 59.547 50.000 0.00 0.00 0.00 3.69
564 565 2.830923 CCCTATCCTATGAGCACCTCTG 59.169 54.545 0.00 0.00 0.00 3.35
565 566 3.501202 CCCTATCCTATGAGCACCTCTGA 60.501 52.174 0.00 0.00 0.00 3.27
566 567 4.155709 CCTATCCTATGAGCACCTCTGAA 58.844 47.826 0.00 0.00 0.00 3.02
567 568 4.590647 CCTATCCTATGAGCACCTCTGAAA 59.409 45.833 0.00 0.00 0.00 2.69
568 569 4.686191 ATCCTATGAGCACCTCTGAAAG 57.314 45.455 0.00 0.00 0.00 2.62
569 570 3.713003 TCCTATGAGCACCTCTGAAAGA 58.287 45.455 0.00 0.00 43.69 2.52
570 571 3.449018 TCCTATGAGCACCTCTGAAAGAC 59.551 47.826 0.00 0.00 38.67 3.01
571 572 3.450457 CCTATGAGCACCTCTGAAAGACT 59.550 47.826 0.00 0.00 38.67 3.24
572 573 2.827800 TGAGCACCTCTGAAAGACTG 57.172 50.000 0.00 0.00 38.67 3.51
573 574 2.042464 TGAGCACCTCTGAAAGACTGT 58.958 47.619 0.00 0.00 38.67 3.55
574 575 2.224137 TGAGCACCTCTGAAAGACTGTG 60.224 50.000 0.00 0.00 38.67 3.66
576 577 1.517242 CACCTCTGAAAGACTGTGCC 58.483 55.000 0.00 0.00 38.67 5.01
577 578 0.034059 ACCTCTGAAAGACTGTGCCG 59.966 55.000 0.00 0.00 38.67 5.69
578 579 0.318441 CCTCTGAAAGACTGTGCCGA 59.682 55.000 0.00 0.00 38.67 5.54
579 580 1.270305 CCTCTGAAAGACTGTGCCGAA 60.270 52.381 0.00 0.00 38.67 4.30
580 581 2.483876 CTCTGAAAGACTGTGCCGAAA 58.516 47.619 0.00 0.00 38.67 3.46
581 582 3.070018 CTCTGAAAGACTGTGCCGAAAT 58.930 45.455 0.00 0.00 38.67 2.17
582 583 3.067106 TCTGAAAGACTGTGCCGAAATC 58.933 45.455 0.00 0.00 38.67 2.17
583 584 2.151202 TGAAAGACTGTGCCGAAATCC 58.849 47.619 0.00 0.00 0.00 3.01
584 585 2.224523 TGAAAGACTGTGCCGAAATCCT 60.225 45.455 0.00 0.00 0.00 3.24
585 586 1.813513 AAGACTGTGCCGAAATCCTG 58.186 50.000 0.00 0.00 0.00 3.86
586 587 0.976641 AGACTGTGCCGAAATCCTGA 59.023 50.000 0.00 0.00 0.00 3.86
587 588 1.347707 AGACTGTGCCGAAATCCTGAA 59.652 47.619 0.00 0.00 0.00 3.02
588 589 2.151202 GACTGTGCCGAAATCCTGAAA 58.849 47.619 0.00 0.00 0.00 2.69
589 590 2.749621 GACTGTGCCGAAATCCTGAAAT 59.250 45.455 0.00 0.00 0.00 2.17
590 591 3.938963 GACTGTGCCGAAATCCTGAAATA 59.061 43.478 0.00 0.00 0.00 1.40
591 592 4.331968 ACTGTGCCGAAATCCTGAAATAA 58.668 39.130 0.00 0.00 0.00 1.40
592 593 4.764823 ACTGTGCCGAAATCCTGAAATAAA 59.235 37.500 0.00 0.00 0.00 1.40
593 594 5.418840 ACTGTGCCGAAATCCTGAAATAAAT 59.581 36.000 0.00 0.00 0.00 1.40
594 595 5.649557 TGTGCCGAAATCCTGAAATAAATG 58.350 37.500 0.00 0.00 0.00 2.32
595 596 4.504097 GTGCCGAAATCCTGAAATAAATGC 59.496 41.667 0.00 0.00 0.00 3.56
596 597 3.730715 GCCGAAATCCTGAAATAAATGCG 59.269 43.478 0.00 0.00 0.00 4.73
597 598 4.497340 GCCGAAATCCTGAAATAAATGCGA 60.497 41.667 0.00 0.00 0.00 5.10
598 599 5.207768 CCGAAATCCTGAAATAAATGCGAG 58.792 41.667 0.00 0.00 0.00 5.03
599 600 4.672413 CGAAATCCTGAAATAAATGCGAGC 59.328 41.667 0.00 0.00 0.00 5.03
600 601 5.581126 AAATCCTGAAATAAATGCGAGCA 57.419 34.783 0.00 0.00 0.00 4.26
601 602 4.558538 ATCCTGAAATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
602 603 2.682856 TCCTGAAATAAATGCGAGCACC 59.317 45.455 0.00 0.00 0.00 5.01
603 604 2.423185 CCTGAAATAAATGCGAGCACCA 59.577 45.455 0.00 0.00 0.00 4.17
604 605 3.488047 CCTGAAATAAATGCGAGCACCAG 60.488 47.826 0.00 0.34 0.00 4.00
605 606 2.423185 TGAAATAAATGCGAGCACCAGG 59.577 45.455 0.00 0.00 0.00 4.45
606 607 2.418368 AATAAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
607 608 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
608 609 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
609 610 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
610 611 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
611 612 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
612 613 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
613 614 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
614 615 1.813513 CGAGCACCAGGATTTGAACT 58.186 50.000 0.00 0.00 0.00 3.01
615 616 1.734465 CGAGCACCAGGATTTGAACTC 59.266 52.381 0.00 0.00 0.00 3.01
616 617 2.613977 CGAGCACCAGGATTTGAACTCT 60.614 50.000 0.00 0.00 0.00 3.24
617 618 2.746362 GAGCACCAGGATTTGAACTCTG 59.254 50.000 0.00 0.00 0.00 3.35
618 619 2.373169 AGCACCAGGATTTGAACTCTGA 59.627 45.455 0.00 0.00 0.00 3.27
619 620 3.009916 AGCACCAGGATTTGAACTCTGAT 59.990 43.478 0.00 0.00 0.00 2.90
620 621 3.128242 GCACCAGGATTTGAACTCTGATG 59.872 47.826 0.00 0.00 0.00 3.07
621 622 3.693085 CACCAGGATTTGAACTCTGATGG 59.307 47.826 0.00 0.00 0.00 3.51
622 623 3.285484 CCAGGATTTGAACTCTGATGGG 58.715 50.000 0.00 0.00 0.00 4.00
623 624 2.686915 CAGGATTTGAACTCTGATGGGC 59.313 50.000 0.00 0.00 0.00 5.36
624 625 2.579860 AGGATTTGAACTCTGATGGGCT 59.420 45.455 0.00 0.00 0.00 5.19
625 626 2.686915 GGATTTGAACTCTGATGGGCTG 59.313 50.000 0.00 0.00 0.00 4.85
626 627 2.205022 TTTGAACTCTGATGGGCTGG 57.795 50.000 0.00 0.00 0.00 4.85
627 628 0.329261 TTGAACTCTGATGGGCTGGG 59.671 55.000 0.00 0.00 0.00 4.45
628 629 1.225704 GAACTCTGATGGGCTGGGG 59.774 63.158 0.00 0.00 0.00 4.96
629 630 1.229951 AACTCTGATGGGCTGGGGA 60.230 57.895 0.00 0.00 0.00 4.81
630 631 0.625683 AACTCTGATGGGCTGGGGAT 60.626 55.000 0.00 0.00 0.00 3.85
631 632 0.268869 ACTCTGATGGGCTGGGGATA 59.731 55.000 0.00 0.00 0.00 2.59
632 633 0.689623 CTCTGATGGGCTGGGGATAC 59.310 60.000 0.00 0.00 0.00 2.24
648 649 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
649 650 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
650 651 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
651 652 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
652 653 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
653 654 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
654 655 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
655 656 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
656 657 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
657 658 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
658 659 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
659 660 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
660 661 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
661 662 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
662 663 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
672 673 2.590575 CCACAGGTTGGTTCGCGT 60.591 61.111 5.77 0.00 41.10 6.01
673 674 2.631428 CACAGGTTGGTTCGCGTG 59.369 61.111 5.77 0.00 0.00 5.34
674 675 2.177580 CACAGGTTGGTTCGCGTGT 61.178 57.895 5.77 0.00 34.57 4.49
675 676 0.876777 CACAGGTTGGTTCGCGTGTA 60.877 55.000 5.77 0.00 33.22 2.90
676 677 0.877213 ACAGGTTGGTTCGCGTGTAC 60.877 55.000 5.77 2.94 32.83 2.90
677 678 0.599204 CAGGTTGGTTCGCGTGTACT 60.599 55.000 5.77 0.00 0.00 2.73
678 679 0.105408 AGGTTGGTTCGCGTGTACTT 59.895 50.000 5.77 0.00 0.00 2.24
679 680 0.939419 GGTTGGTTCGCGTGTACTTT 59.061 50.000 5.77 0.00 0.00 2.66
680 681 1.331447 GGTTGGTTCGCGTGTACTTTT 59.669 47.619 5.77 0.00 0.00 2.27
681 682 2.223317 GGTTGGTTCGCGTGTACTTTTT 60.223 45.455 5.77 0.00 0.00 1.94
707 708 4.035208 AGTTGCCTCAAAGAAAAGTGTACG 59.965 41.667 0.00 0.00 0.00 3.67
708 709 3.537580 TGCCTCAAAGAAAAGTGTACGT 58.462 40.909 0.00 0.00 0.00 3.57
850 860 1.877576 AAAGCAAAAGCTAGCGGCCC 61.878 55.000 9.55 0.00 43.05 5.80
1103 3017 3.326109 GTTCACGACCACAACCGG 58.674 61.111 0.00 0.00 0.00 5.28
1245 3161 4.247380 CCGCTGCCTCAGATCCCC 62.247 72.222 0.00 0.00 32.44 4.81
1251 3167 2.770048 CCTCAGATCCCCGGCCTT 60.770 66.667 0.00 0.00 0.00 4.35
1306 3231 3.083349 CTCCACCATCTCCCGGCA 61.083 66.667 0.00 0.00 0.00 5.69
1317 3242 2.035626 CCCGGCATCCCACACTTT 59.964 61.111 0.00 0.00 0.00 2.66
1432 3357 1.372499 ACCAACATCACCGTCGTCG 60.372 57.895 0.00 0.00 0.00 5.12
1535 3460 0.255318 ATGAGCAAGCTCTTCCCCAG 59.745 55.000 21.35 0.00 43.12 4.45
1618 3543 2.049156 CGCTTCTCACGTGCTCCA 60.049 61.111 11.67 0.00 0.00 3.86
1625 3550 1.540267 TCTCACGTGCTCCAGTAAGTC 59.460 52.381 11.67 0.00 0.00 3.01
1641 3854 0.859232 AGTCGCAGCTTTTACGTGTG 59.141 50.000 0.00 0.00 0.00 3.82
1644 3857 1.841663 CGCAGCTTTTACGTGTGCCT 61.842 55.000 0.00 0.00 0.00 4.75
1651 3864 3.551551 CTTTTACGTGTGCCTTTGCTAC 58.448 45.455 0.00 0.00 38.71 3.58
1653 3866 0.668096 TACGTGTGCCTTTGCTACGG 60.668 55.000 0.00 0.00 45.98 4.02
1703 3916 7.825681 TCGTTAATGAATTCATGGTGATGTTT 58.174 30.769 21.39 6.09 36.56 2.83
1704 3917 7.967854 TCGTTAATGAATTCATGGTGATGTTTC 59.032 33.333 21.39 3.65 36.56 2.78
1729 3942 4.404098 AAACCCTACCGCCGCTGG 62.404 66.667 0.44 0.44 0.00 4.85
1739 3952 3.922640 GCCGCTGGCTCCTCCTAG 61.923 72.222 11.61 0.00 46.69 3.02
1740 3953 2.443016 CCGCTGGCTCCTCCTAGT 60.443 66.667 0.00 0.00 35.26 2.57
1741 3954 2.060980 CCGCTGGCTCCTCCTAGTT 61.061 63.158 0.00 0.00 35.26 2.24
1742 3955 1.439644 CGCTGGCTCCTCCTAGTTC 59.560 63.158 0.00 0.00 35.26 3.01
1743 3956 1.826709 GCTGGCTCCTCCTAGTTCC 59.173 63.158 0.00 0.00 35.26 3.62
1744 3957 0.978146 GCTGGCTCCTCCTAGTTCCA 60.978 60.000 0.00 0.00 35.26 3.53
1745 3958 0.827368 CTGGCTCCTCCTAGTTCCAC 59.173 60.000 0.00 0.00 35.26 4.02
1746 3959 0.413832 TGGCTCCTCCTAGTTCCACT 59.586 55.000 0.00 0.00 35.26 4.00
1747 3960 1.116308 GGCTCCTCCTAGTTCCACTC 58.884 60.000 0.00 0.00 0.00 3.51
1748 3961 1.116308 GCTCCTCCTAGTTCCACTCC 58.884 60.000 0.00 0.00 0.00 3.85
1749 3962 1.619977 GCTCCTCCTAGTTCCACTCCA 60.620 57.143 0.00 0.00 0.00 3.86
1855 4090 7.016563 ACACCAGCCTGAATTCTGTGATATATA 59.983 37.037 7.05 0.00 0.00 0.86
1856 4091 8.045507 CACCAGCCTGAATTCTGTGATATATAT 58.954 37.037 7.05 0.00 0.00 0.86
1858 4093 7.012138 CCAGCCTGAATTCTGTGATATATATGC 59.988 40.741 7.05 1.52 0.00 3.14
1859 4094 7.551617 CAGCCTGAATTCTGTGATATATATGCA 59.448 37.037 7.05 0.00 0.00 3.96
1861 4096 8.343366 GCCTGAATTCTGTGATATATATGCATG 58.657 37.037 10.16 0.00 0.00 4.06
1863 4098 8.795842 TGAATTCTGTGATATATATGCATGCA 57.204 30.769 25.04 25.04 0.00 3.96
1865 4100 9.665264 GAATTCTGTGATATATATGCATGCATG 57.335 33.333 37.43 22.70 37.82 4.06
1867 4102 7.781548 TCTGTGATATATATGCATGCATGTC 57.218 36.000 37.43 25.70 37.82 3.06
1868 4103 6.764560 TCTGTGATATATATGCATGCATGTCC 59.235 38.462 37.43 21.91 37.82 4.02
1873 4108 8.877195 TGATATATATGCATGCATGTCCTCTAT 58.123 33.333 37.43 24.53 37.82 1.98
1879 4114 9.722184 ATATGCATGCATGTCCTCTATAATATC 57.278 33.333 37.43 6.41 37.82 1.63
1880 4115 6.351711 TGCATGCATGTCCTCTATAATATCC 58.648 40.000 26.79 5.79 0.00 2.59
1933 4168 1.959282 GCAGAGGCATCCCCATAAAAG 59.041 52.381 0.00 0.00 40.72 2.27
1942 4177 4.343239 GCATCCCCATAAAAGCAAGAAGAT 59.657 41.667 0.00 0.00 0.00 2.40
1955 4214 3.863424 GCAAGAAGATGATGCATGGTTTG 59.137 43.478 2.46 0.38 39.81 2.93
1969 4228 7.658525 TGCATGGTTTGGTGAAGATTATTAT 57.341 32.000 0.00 0.00 0.00 1.28
1970 4229 8.759481 TGCATGGTTTGGTGAAGATTATTATA 57.241 30.769 0.00 0.00 0.00 0.98
2022 4288 5.164022 CCGCTTTAGTTTTACCAAGACGTAG 60.164 44.000 0.00 0.00 0.00 3.51
2041 4315 7.665145 AGACGTAGAAGTACTAAGGATATTCCC 59.335 40.741 0.00 0.00 37.19 3.97
2051 4325 6.814043 ACTAAGGATATTCCCGAGTTTACAC 58.186 40.000 0.00 0.00 37.19 2.90
2071 4345 2.887783 ACAGCCATGGAGAGTATAGTCG 59.112 50.000 18.40 0.00 0.00 4.18
2094 4368 5.856986 CGTGTATAAGGTCGTCAATGGATAG 59.143 44.000 0.00 0.00 0.00 2.08
2095 4369 5.634020 GTGTATAAGGTCGTCAATGGATAGC 59.366 44.000 0.00 0.00 0.00 2.97
2097 4371 3.845781 AAGGTCGTCAATGGATAGCAT 57.154 42.857 0.00 0.00 0.00 3.79
2185 4463 3.762674 GTAGCTTACCAGGCTGACC 57.237 57.895 17.94 0.00 40.52 4.02
2187 4465 1.956629 TAGCTTACCAGGCTGACCGC 61.957 60.000 17.94 12.49 42.76 5.68
2188 4466 2.982130 CTTACCAGGCTGACCGCT 59.018 61.111 17.94 0.00 42.76 5.52
2189 4467 1.296715 CTTACCAGGCTGACCGCTT 59.703 57.895 17.94 0.00 42.76 4.68
2190 4468 0.741221 CTTACCAGGCTGACCGCTTC 60.741 60.000 17.94 0.00 42.76 3.86
2193 4471 2.571757 CAGGCTGACCGCTTCGTA 59.428 61.111 9.42 0.00 42.76 3.43
2194 4472 1.080093 CAGGCTGACCGCTTCGTAA 60.080 57.895 9.42 0.00 42.76 3.18
2196 4474 0.034337 AGGCTGACCGCTTCGTAAAA 59.966 50.000 0.00 0.00 42.76 1.52
2197 4475 0.869730 GGCTGACCGCTTCGTAAAAA 59.130 50.000 0.00 0.00 39.13 1.94
2198 4476 1.467342 GGCTGACCGCTTCGTAAAAAT 59.533 47.619 0.00 0.00 39.13 1.82
2199 4477 2.505866 GCTGACCGCTTCGTAAAAATG 58.494 47.619 0.00 0.00 35.14 2.32
2201 4479 3.364565 GCTGACCGCTTCGTAAAAATGAA 60.365 43.478 0.00 0.00 35.14 2.57
2202 4480 4.671766 GCTGACCGCTTCGTAAAAATGAAT 60.672 41.667 0.00 0.00 35.14 2.57
2204 4482 4.452795 TGACCGCTTCGTAAAAATGAATGA 59.547 37.500 0.00 0.00 0.00 2.57
2205 4483 5.049336 TGACCGCTTCGTAAAAATGAATGAA 60.049 36.000 0.00 0.00 0.00 2.57
2206 4484 5.949735 ACCGCTTCGTAAAAATGAATGAAT 58.050 33.333 0.00 0.00 0.00 2.57
2207 4485 6.386654 ACCGCTTCGTAAAAATGAATGAATT 58.613 32.000 0.00 0.00 0.00 2.17
2208 4486 6.866248 ACCGCTTCGTAAAAATGAATGAATTT 59.134 30.769 0.00 0.00 0.00 1.82
2209 4487 7.148820 ACCGCTTCGTAAAAATGAATGAATTTG 60.149 33.333 0.00 0.00 30.21 2.32
2210 4488 7.148820 CCGCTTCGTAAAAATGAATGAATTTGT 60.149 33.333 0.00 0.00 30.21 2.83
2211 4489 8.213812 CGCTTCGTAAAAATGAATGAATTTGTT 58.786 29.630 0.00 0.00 30.21 2.83
2233 4563 7.973601 TGTTGTATATACATCTGTGTTGCTTG 58.026 34.615 16.16 0.00 39.77 4.01
2245 4575 5.182190 TCTGTGTTGCTTGTGTTCAAACTTA 59.818 36.000 0.00 0.00 32.87 2.24
2254 4584 5.712217 TGTGTTCAAACTTAGAAGTCGTG 57.288 39.130 0.00 0.00 38.57 4.35
2257 4587 7.204604 TGTGTTCAAACTTAGAAGTCGTGATA 58.795 34.615 8.69 1.94 38.57 2.15
2383 4837 1.928868 AATGGGCCTCTGTTTTCCTG 58.071 50.000 4.53 0.00 0.00 3.86
2508 4996 4.840005 TGACACAACACGCGGCCA 62.840 61.111 12.47 0.00 0.00 5.36
2624 5112 1.515521 CGGTTGCACCCTGAAGAACC 61.516 60.000 0.00 0.00 33.75 3.62
2638 5126 0.608640 AGAACCGCCTCCTAGTTGTG 59.391 55.000 0.00 0.00 0.00 3.33
2639 5127 0.320697 GAACCGCCTCCTAGTTGTGT 59.679 55.000 0.00 0.00 0.00 3.72
2641 5129 1.153823 CCGCCTCCTAGTTGTGTCG 60.154 63.158 0.00 0.00 0.00 4.35
2643 5131 0.456312 CGCCTCCTAGTTGTGTCGAC 60.456 60.000 9.11 9.11 0.00 4.20
2685 5176 7.715657 TGTTTTCACCATATGGAAATATCTGC 58.284 34.615 28.77 9.66 38.11 4.26
2686 5177 7.341512 TGTTTTCACCATATGGAAATATCTGCA 59.658 33.333 28.77 11.88 38.11 4.41
2687 5178 7.894753 TTTCACCATATGGAAATATCTGCAA 57.105 32.000 28.77 7.90 38.94 4.08
2688 5179 7.894753 TTCACCATATGGAAATATCTGCAAA 57.105 32.000 28.77 2.94 38.94 3.68
2689 5180 7.894753 TCACCATATGGAAATATCTGCAAAA 57.105 32.000 28.77 0.00 38.94 2.44
2690 5181 8.303780 TCACCATATGGAAATATCTGCAAAAA 57.696 30.769 28.77 0.00 38.94 1.94
2691 5182 8.926374 TCACCATATGGAAATATCTGCAAAAAT 58.074 29.630 28.77 0.00 38.94 1.82
2692 5183 8.984764 CACCATATGGAAATATCTGCAAAAATG 58.015 33.333 28.77 5.75 38.94 2.32
2693 5184 8.707449 ACCATATGGAAATATCTGCAAAAATGT 58.293 29.630 28.77 0.00 38.94 2.71
2694 5185 9.550406 CCATATGGAAATATCTGCAAAAATGTT 57.450 29.630 17.49 0.00 37.39 2.71
2698 5189 8.309163 TGGAAATATCTGCAAAAATGTTTCAC 57.691 30.769 18.61 12.49 35.75 3.18
2699 5190 7.387397 TGGAAATATCTGCAAAAATGTTTCACC 59.613 33.333 18.61 9.84 35.75 4.02
2700 5191 7.387397 GGAAATATCTGCAAAAATGTTTCACCA 59.613 33.333 18.61 0.00 35.75 4.17
2701 5192 8.851541 AAATATCTGCAAAAATGTTTCACCAT 57.148 26.923 0.00 0.00 0.00 3.55
2702 5193 9.941325 AAATATCTGCAAAAATGTTTCACCATA 57.059 25.926 0.00 0.00 0.00 2.74
2704 5195 7.837202 ATCTGCAAAAATGTTTCACCATATG 57.163 32.000 0.00 0.00 0.00 1.78
2705 5196 6.164876 TCTGCAAAAATGTTTCACCATATGG 58.835 36.000 20.68 20.68 42.17 2.74
2706 5197 6.014755 TCTGCAAAAATGTTTCACCATATGGA 60.015 34.615 28.77 3.58 38.94 3.41
2707 5198 6.528321 TGCAAAAATGTTTCACCATATGGAA 58.472 32.000 28.77 10.30 38.94 3.53
2708 5199 6.994496 TGCAAAAATGTTTCACCATATGGAAA 59.006 30.769 28.77 15.83 38.94 3.13
2709 5200 7.664731 TGCAAAAATGTTTCACCATATGGAAAT 59.335 29.630 28.77 2.74 35.66 2.17
2710 5201 9.160496 GCAAAAATGTTTCACCATATGGAAATA 57.840 29.630 28.77 16.63 35.66 1.40
2726 5217 4.588106 TGGAAATATCCCGACGGTGTATAA 59.412 41.667 13.94 0.00 45.95 0.98
2729 5220 6.146673 GGAAATATCCCGACGGTGTATAAAAG 59.853 42.308 13.94 0.00 40.10 2.27
2768 5259 5.036916 ACACCAGTTGGGATAAATCTAGGA 58.963 41.667 2.79 0.00 41.15 2.94
2786 5277 2.516930 CCCCAATAGCTGGCCACG 60.517 66.667 0.00 0.00 44.90 4.94
2790 5281 0.965363 CCAATAGCTGGCCACGGTTT 60.965 55.000 0.00 0.00 38.76 3.27
2801 5292 1.734163 CCACGGTTTGTTAGCTAGGG 58.266 55.000 0.00 0.00 0.00 3.53
2810 5301 6.417258 GGTTTGTTAGCTAGGGTGGTATTTA 58.583 40.000 0.00 0.00 0.00 1.40
2814 5306 5.421693 TGTTAGCTAGGGTGGTATTTACGAA 59.578 40.000 0.00 0.00 0.00 3.85
2820 5312 2.771372 GGGTGGTATTTACGAACCCCTA 59.229 50.000 14.84 0.00 43.03 3.53
2821 5313 3.199727 GGGTGGTATTTACGAACCCCTAA 59.800 47.826 14.84 0.00 43.03 2.69
2849 5341 6.206829 GGAATTTTATATGTACTGGGTGAGGC 59.793 42.308 0.00 0.00 0.00 4.70
2864 5356 3.769300 GGTGAGGCTGGATTGGTATTTTT 59.231 43.478 0.00 0.00 0.00 1.94
2867 5359 6.330278 GTGAGGCTGGATTGGTATTTTTAAC 58.670 40.000 0.00 0.00 0.00 2.01
2869 5361 6.152661 TGAGGCTGGATTGGTATTTTTAACTG 59.847 38.462 0.00 0.00 0.00 3.16
2890 5382 8.449251 AACTGCCATGTCATTGTTTAATTTTT 57.551 26.923 0.00 0.00 0.00 1.94
2891 5383 8.086851 ACTGCCATGTCATTGTTTAATTTTTC 57.913 30.769 0.00 0.00 0.00 2.29
2892 5384 7.095691 ACTGCCATGTCATTGTTTAATTTTTCG 60.096 33.333 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
292 293 2.738135 CCGGTTTGAATGCGTCTTTTT 58.262 42.857 0.00 0.00 0.00 1.94
293 294 1.601914 GCCGGTTTGAATGCGTCTTTT 60.602 47.619 1.90 0.00 0.00 2.27
294 295 0.039527 GCCGGTTTGAATGCGTCTTT 60.040 50.000 1.90 0.00 0.00 2.52
295 296 1.579429 GCCGGTTTGAATGCGTCTT 59.421 52.632 1.90 0.00 0.00 3.01
296 297 2.677003 CGCCGGTTTGAATGCGTCT 61.677 57.895 1.90 0.00 41.95 4.18
297 298 2.177654 TTCGCCGGTTTGAATGCGTC 62.178 55.000 1.90 0.00 46.57 5.19
298 299 2.182614 CTTCGCCGGTTTGAATGCGT 62.183 55.000 1.90 0.00 46.57 5.24
300 301 0.729140 CACTTCGCCGGTTTGAATGC 60.729 55.000 1.90 0.00 0.00 3.56
301 302 0.871722 TCACTTCGCCGGTTTGAATG 59.128 50.000 1.90 6.37 0.00 2.67
302 303 1.737793 GATCACTTCGCCGGTTTGAAT 59.262 47.619 1.90 0.00 0.00 2.57
303 304 1.153353 GATCACTTCGCCGGTTTGAA 58.847 50.000 1.90 4.47 0.00 2.69
304 305 1.011968 CGATCACTTCGCCGGTTTGA 61.012 55.000 1.90 0.00 41.69 2.69
305 306 1.419922 CGATCACTTCGCCGGTTTG 59.580 57.895 1.90 0.00 41.69 2.93
306 307 3.870606 CGATCACTTCGCCGGTTT 58.129 55.556 1.90 0.00 41.69 3.27
314 315 2.196497 GCTCGTACGCGATCACTTC 58.804 57.895 15.93 0.00 46.80 3.01
315 316 4.379221 GCTCGTACGCGATCACTT 57.621 55.556 15.93 0.00 46.80 3.16
324 325 2.205595 TTTTTGCGCTCGCTCGTACG 62.206 55.000 9.53 9.53 42.51 3.67
325 326 1.489824 TTTTTGCGCTCGCTCGTAC 59.510 52.632 9.73 0.00 42.51 3.67
326 327 3.939573 TTTTTGCGCTCGCTCGTA 58.060 50.000 9.73 0.00 42.51 3.43
344 345 1.548719 GGCCGGCCTGTTTATCTTTTT 59.451 47.619 38.76 0.00 0.00 1.94
345 346 1.182667 GGCCGGCCTGTTTATCTTTT 58.817 50.000 38.76 0.00 0.00 2.27
346 347 0.039035 TGGCCGGCCTGTTTATCTTT 59.961 50.000 43.34 0.00 36.94 2.52
347 348 0.039035 TTGGCCGGCCTGTTTATCTT 59.961 50.000 43.34 0.00 36.94 2.40
348 349 0.039035 TTTGGCCGGCCTGTTTATCT 59.961 50.000 43.34 0.00 36.94 1.98
349 350 1.111277 ATTTGGCCGGCCTGTTTATC 58.889 50.000 43.34 17.51 36.94 1.75
350 351 1.206849 CAATTTGGCCGGCCTGTTTAT 59.793 47.619 43.34 25.52 36.94 1.40
351 352 0.605589 CAATTTGGCCGGCCTGTTTA 59.394 50.000 43.34 23.22 36.94 2.01
352 353 1.370810 CAATTTGGCCGGCCTGTTT 59.629 52.632 43.34 29.52 36.94 2.83
353 354 3.059099 CAATTTGGCCGGCCTGTT 58.941 55.556 43.34 30.63 36.94 3.16
354 355 2.779742 TAGCAATTTGGCCGGCCTGT 62.780 55.000 43.34 27.03 36.94 4.00
355 356 1.394266 ATAGCAATTTGGCCGGCCTG 61.394 55.000 43.34 33.43 36.94 4.85
356 357 0.687427 AATAGCAATTTGGCCGGCCT 60.687 50.000 43.34 25.60 36.94 5.19
357 358 0.249447 GAATAGCAATTTGGCCGGCC 60.249 55.000 39.40 39.40 0.00 6.13
358 359 0.459489 TGAATAGCAATTTGGCCGGC 59.541 50.000 21.18 21.18 0.00 6.13
359 360 2.481795 CCTTGAATAGCAATTTGGCCGG 60.482 50.000 0.00 0.00 35.59 6.13
360 361 2.481795 CCCTTGAATAGCAATTTGGCCG 60.482 50.000 0.00 0.00 35.59 6.13
361 362 2.765699 TCCCTTGAATAGCAATTTGGCC 59.234 45.455 0.00 0.00 35.59 5.36
362 363 4.470334 TTCCCTTGAATAGCAATTTGGC 57.530 40.909 0.00 0.00 35.59 4.52
363 364 6.936335 ACTTTTTCCCTTGAATAGCAATTTGG 59.064 34.615 0.00 0.00 35.59 3.28
364 365 7.118245 GGACTTTTTCCCTTGAATAGCAATTTG 59.882 37.037 0.00 0.00 38.70 2.32
365 366 7.161404 GGACTTTTTCCCTTGAATAGCAATTT 58.839 34.615 0.00 0.00 38.70 1.82
366 367 6.701340 GGACTTTTTCCCTTGAATAGCAATT 58.299 36.000 0.00 0.00 38.70 2.32
367 368 6.286240 GGACTTTTTCCCTTGAATAGCAAT 57.714 37.500 0.00 0.00 38.70 3.56
368 369 5.722021 GGACTTTTTCCCTTGAATAGCAA 57.278 39.130 0.00 0.00 38.70 3.91
380 381 1.807142 CTCGCCTGAAGGACTTTTTCC 59.193 52.381 0.00 0.00 46.33 3.13
381 382 2.739379 CTCTCGCCTGAAGGACTTTTTC 59.261 50.000 0.00 0.00 37.39 2.29
382 383 2.368875 TCTCTCGCCTGAAGGACTTTTT 59.631 45.455 0.00 0.00 37.39 1.94
383 384 1.971357 TCTCTCGCCTGAAGGACTTTT 59.029 47.619 0.00 0.00 37.39 2.27
384 385 1.633774 TCTCTCGCCTGAAGGACTTT 58.366 50.000 0.00 0.00 37.39 2.66
385 386 1.548269 CTTCTCTCGCCTGAAGGACTT 59.452 52.381 0.00 0.00 36.84 3.01
386 387 1.181786 CTTCTCTCGCCTGAAGGACT 58.818 55.000 0.00 0.00 36.84 3.85
387 388 0.459411 GCTTCTCTCGCCTGAAGGAC 60.459 60.000 0.00 0.00 39.80 3.85
388 389 0.613292 AGCTTCTCTCGCCTGAAGGA 60.613 55.000 0.00 0.00 39.80 3.36
389 390 1.107114 TAGCTTCTCTCGCCTGAAGG 58.893 55.000 0.00 0.00 39.80 3.46
390 391 2.481104 CCTTAGCTTCTCTCGCCTGAAG 60.481 54.545 0.00 0.00 41.67 3.02
391 392 1.478510 CCTTAGCTTCTCTCGCCTGAA 59.521 52.381 0.00 0.00 0.00 3.02
392 393 1.107114 CCTTAGCTTCTCTCGCCTGA 58.893 55.000 0.00 0.00 0.00 3.86
393 394 1.107114 TCCTTAGCTTCTCTCGCCTG 58.893 55.000 0.00 0.00 0.00 4.85
394 395 1.107945 GTCCTTAGCTTCTCTCGCCT 58.892 55.000 0.00 0.00 0.00 5.52
395 396 1.066454 GAGTCCTTAGCTTCTCTCGCC 59.934 57.143 0.00 0.00 0.00 5.54
396 397 1.268335 CGAGTCCTTAGCTTCTCTCGC 60.268 57.143 0.00 0.00 38.28 5.03
397 398 1.268335 GCGAGTCCTTAGCTTCTCTCG 60.268 57.143 16.26 16.26 44.60 4.04
398 399 1.746220 TGCGAGTCCTTAGCTTCTCTC 59.254 52.381 0.00 0.00 0.00 3.20
399 400 1.474879 GTGCGAGTCCTTAGCTTCTCT 59.525 52.381 0.00 0.00 0.00 3.10
400 401 1.202582 TGTGCGAGTCCTTAGCTTCTC 59.797 52.381 0.00 0.00 0.00 2.87
401 402 1.257743 TGTGCGAGTCCTTAGCTTCT 58.742 50.000 0.00 0.00 0.00 2.85
402 403 2.080286 TTGTGCGAGTCCTTAGCTTC 57.920 50.000 0.00 0.00 0.00 3.86
403 404 2.417719 CTTTGTGCGAGTCCTTAGCTT 58.582 47.619 0.00 0.00 0.00 3.74
404 405 1.941668 GCTTTGTGCGAGTCCTTAGCT 60.942 52.381 0.00 0.00 0.00 3.32
405 406 0.444260 GCTTTGTGCGAGTCCTTAGC 59.556 55.000 0.00 0.00 0.00 3.09
416 417 1.671054 TACAGGAGCCGCTTTGTGC 60.671 57.895 17.19 0.00 38.57 4.57
417 418 1.298859 GGTACAGGAGCCGCTTTGTG 61.299 60.000 17.19 8.33 0.00 3.33
418 419 1.003718 GGTACAGGAGCCGCTTTGT 60.004 57.895 13.83 13.83 0.00 2.83
419 420 2.100631 CGGTACAGGAGCCGCTTTG 61.101 63.158 0.00 0.00 41.53 2.77
420 421 2.264794 CGGTACAGGAGCCGCTTT 59.735 61.111 0.00 0.00 41.53 3.51
421 422 3.771160 CCGGTACAGGAGCCGCTT 61.771 66.667 6.11 0.00 45.98 4.68
424 425 3.834799 GACCCGGTACAGGAGCCG 61.835 72.222 14.25 0.00 46.80 5.52
425 426 2.363925 AGACCCGGTACAGGAGCC 60.364 66.667 14.25 2.20 0.00 4.70
426 427 1.043673 ATGAGACCCGGTACAGGAGC 61.044 60.000 14.25 4.89 0.00 4.70
427 428 1.409427 GAATGAGACCCGGTACAGGAG 59.591 57.143 14.25 6.32 0.00 3.69
428 429 1.481871 GAATGAGACCCGGTACAGGA 58.518 55.000 14.25 0.00 0.00 3.86
429 430 0.464452 GGAATGAGACCCGGTACAGG 59.536 60.000 4.87 4.87 0.00 4.00
430 431 1.191535 TGGAATGAGACCCGGTACAG 58.808 55.000 0.00 0.00 0.00 2.74
431 432 1.874129 ATGGAATGAGACCCGGTACA 58.126 50.000 0.00 0.00 0.00 2.90
440 441 7.855368 ATGTACACATAAAGCCATGGAATGAGA 60.855 37.037 18.40 0.00 40.06 3.27
441 442 6.263842 ATGTACACATAAAGCCATGGAATGAG 59.736 38.462 18.40 13.13 40.06 2.90
442 443 6.128486 ATGTACACATAAAGCCATGGAATGA 58.872 36.000 18.40 0.00 40.06 2.57
443 444 5.833406 TGTACACATAAAGCCATGGAATG 57.167 39.130 18.40 14.64 46.21 2.67
444 445 7.422465 AAATGTACACATAAAGCCATGGAAT 57.578 32.000 18.40 0.00 35.10 3.01
445 446 6.849085 AAATGTACACATAAAGCCATGGAA 57.151 33.333 18.40 0.00 35.10 3.53
446 447 6.849085 AAAATGTACACATAAAGCCATGGA 57.151 33.333 18.40 0.00 35.10 3.41
469 470 5.728344 GCTTGCGTCTGTACTGTGTTAAAAA 60.728 40.000 0.00 0.00 0.00 1.94
470 471 4.260456 GCTTGCGTCTGTACTGTGTTAAAA 60.260 41.667 0.00 0.00 0.00 1.52
471 472 3.246699 GCTTGCGTCTGTACTGTGTTAAA 59.753 43.478 0.00 0.00 0.00 1.52
472 473 2.798283 GCTTGCGTCTGTACTGTGTTAA 59.202 45.455 0.00 0.00 0.00 2.01
473 474 2.400399 GCTTGCGTCTGTACTGTGTTA 58.600 47.619 0.00 0.00 0.00 2.41
474 475 1.217882 GCTTGCGTCTGTACTGTGTT 58.782 50.000 0.00 0.00 0.00 3.32
475 476 0.939577 CGCTTGCGTCTGTACTGTGT 60.940 55.000 6.86 0.00 0.00 3.72
476 477 1.775344 CGCTTGCGTCTGTACTGTG 59.225 57.895 6.86 0.00 0.00 3.66
477 478 2.022129 GCGCTTGCGTCTGTACTGT 61.022 57.895 16.38 0.00 0.00 3.55
478 479 1.284982 AAGCGCTTGCGTCTGTACTG 61.285 55.000 24.40 0.00 45.69 2.74
479 480 0.242825 TAAGCGCTTGCGTCTGTACT 59.757 50.000 32.23 3.76 45.69 2.73
480 481 1.278238 ATAAGCGCTTGCGTCTGTAC 58.722 50.000 32.23 0.00 45.69 2.90
481 482 2.855660 TATAAGCGCTTGCGTCTGTA 57.144 45.000 32.23 10.34 45.69 2.74
482 483 2.225068 ATATAAGCGCTTGCGTCTGT 57.775 45.000 32.23 6.01 45.69 3.41
483 484 3.049912 TGTATATAAGCGCTTGCGTCTG 58.950 45.455 32.23 0.00 45.69 3.51
484 485 3.364889 TGTATATAAGCGCTTGCGTCT 57.635 42.857 32.23 14.14 45.69 4.18
485 486 3.722082 GCATGTATATAAGCGCTTGCGTC 60.722 47.826 32.23 17.62 45.69 5.19
486 487 2.157668 GCATGTATATAAGCGCTTGCGT 59.842 45.455 32.23 19.35 45.69 5.24
487 488 2.762472 GCATGTATATAAGCGCTTGCG 58.238 47.619 32.23 10.90 45.69 4.85
488 489 2.762472 CGCATGTATATAAGCGCTTGC 58.238 47.619 32.23 22.82 43.80 4.01
494 495 6.408858 AAGTGTATGCGCATGTATATAAGC 57.591 37.500 32.48 11.51 0.00 3.09
496 497 9.869757 AGAATAAGTGTATGCGCATGTATATAA 57.130 29.630 32.48 8.02 0.00 0.98
497 498 9.869757 AAGAATAAGTGTATGCGCATGTATATA 57.130 29.630 32.48 18.88 0.00 0.86
498 499 8.777865 AAGAATAAGTGTATGCGCATGTATAT 57.222 30.769 32.48 18.54 0.00 0.86
499 500 9.869757 ATAAGAATAAGTGTATGCGCATGTATA 57.130 29.630 32.48 17.23 0.00 1.47
500 501 8.777865 ATAAGAATAAGTGTATGCGCATGTAT 57.222 30.769 32.48 17.19 0.00 2.29
501 502 9.699703 TTATAAGAATAAGTGTATGCGCATGTA 57.300 29.630 32.48 17.97 0.00 2.29
502 503 8.601845 TTATAAGAATAAGTGTATGCGCATGT 57.398 30.769 32.48 11.40 0.00 3.21
503 504 9.318041 GTTTATAAGAATAAGTGTATGCGCATG 57.682 33.333 32.48 0.00 0.00 4.06
504 505 8.221100 CGTTTATAAGAATAAGTGTATGCGCAT 58.779 33.333 28.23 28.23 0.00 4.73
505 506 7.560700 CGTTTATAAGAATAAGTGTATGCGCA 58.439 34.615 14.96 14.96 0.00 6.09
506 507 6.515340 GCGTTTATAAGAATAAGTGTATGCGC 59.485 38.462 0.00 0.00 0.00 6.09
507 508 7.526186 GTGCGTTTATAAGAATAAGTGTATGCG 59.474 37.037 0.00 0.00 0.00 4.73
508 509 8.332464 TGTGCGTTTATAAGAATAAGTGTATGC 58.668 33.333 0.00 0.00 0.00 3.14
509 510 9.632969 GTGTGCGTTTATAAGAATAAGTGTATG 57.367 33.333 0.00 0.00 0.00 2.39
510 511 9.373603 TGTGTGCGTTTATAAGAATAAGTGTAT 57.626 29.630 0.00 0.00 0.00 2.29
511 512 8.760103 TGTGTGCGTTTATAAGAATAAGTGTA 57.240 30.769 0.00 0.00 0.00 2.90
512 513 7.661127 TGTGTGCGTTTATAAGAATAAGTGT 57.339 32.000 0.00 0.00 0.00 3.55
513 514 7.164171 GCATGTGTGCGTTTATAAGAATAAGTG 59.836 37.037 0.00 0.00 42.28 3.16
514 515 7.186804 GCATGTGTGCGTTTATAAGAATAAGT 58.813 34.615 0.00 0.00 42.28 2.24
515 516 7.594824 GCATGTGTGCGTTTATAAGAATAAG 57.405 36.000 0.00 0.00 42.28 1.73
531 532 1.065199 AGGATAGGGTGTGCATGTGTG 60.065 52.381 0.00 0.00 0.00 3.82
532 533 1.289160 AGGATAGGGTGTGCATGTGT 58.711 50.000 0.00 0.00 0.00 3.72
533 534 3.071457 TCATAGGATAGGGTGTGCATGTG 59.929 47.826 0.00 0.00 0.00 3.21
534 535 3.317406 TCATAGGATAGGGTGTGCATGT 58.683 45.455 0.00 0.00 0.00 3.21
535 536 3.867600 GCTCATAGGATAGGGTGTGCATG 60.868 52.174 0.00 0.00 32.92 4.06
536 537 2.304180 GCTCATAGGATAGGGTGTGCAT 59.696 50.000 0.00 0.00 32.92 3.96
537 538 1.694150 GCTCATAGGATAGGGTGTGCA 59.306 52.381 0.00 0.00 32.92 4.57
538 539 1.694150 TGCTCATAGGATAGGGTGTGC 59.306 52.381 0.00 0.00 0.00 4.57
539 540 2.037772 GGTGCTCATAGGATAGGGTGTG 59.962 54.545 0.00 0.00 0.00 3.82
540 541 2.090494 AGGTGCTCATAGGATAGGGTGT 60.090 50.000 0.00 0.00 0.00 4.16
541 542 2.564947 GAGGTGCTCATAGGATAGGGTG 59.435 54.545 0.00 0.00 0.00 4.61
542 543 2.452823 AGAGGTGCTCATAGGATAGGGT 59.547 50.000 0.00 0.00 32.06 4.34
543 544 2.830923 CAGAGGTGCTCATAGGATAGGG 59.169 54.545 0.00 0.00 32.06 3.53
544 545 3.772387 TCAGAGGTGCTCATAGGATAGG 58.228 50.000 0.00 0.00 32.06 2.57
545 546 5.538053 TCTTTCAGAGGTGCTCATAGGATAG 59.462 44.000 0.00 0.00 32.06 2.08
546 547 5.303078 GTCTTTCAGAGGTGCTCATAGGATA 59.697 44.000 0.00 0.00 32.06 2.59
547 548 4.100808 GTCTTTCAGAGGTGCTCATAGGAT 59.899 45.833 0.00 0.00 32.06 3.24
548 549 3.449018 GTCTTTCAGAGGTGCTCATAGGA 59.551 47.826 0.00 0.00 32.06 2.94
549 550 3.450457 AGTCTTTCAGAGGTGCTCATAGG 59.550 47.826 0.00 0.00 32.06 2.57
550 551 4.081752 ACAGTCTTTCAGAGGTGCTCATAG 60.082 45.833 0.00 0.00 32.06 2.23
551 552 3.834813 ACAGTCTTTCAGAGGTGCTCATA 59.165 43.478 0.00 0.00 32.06 2.15
552 553 2.636893 ACAGTCTTTCAGAGGTGCTCAT 59.363 45.455 0.00 0.00 32.06 2.90
553 554 2.042464 ACAGTCTTTCAGAGGTGCTCA 58.958 47.619 0.00 0.00 32.06 4.26
554 555 2.411904 CACAGTCTTTCAGAGGTGCTC 58.588 52.381 0.00 0.00 0.00 4.26
555 556 1.542108 GCACAGTCTTTCAGAGGTGCT 60.542 52.381 17.26 0.00 45.62 4.40
556 557 0.871057 GCACAGTCTTTCAGAGGTGC 59.129 55.000 12.27 12.27 44.18 5.01
557 558 1.517242 GGCACAGTCTTTCAGAGGTG 58.483 55.000 0.00 0.00 35.19 4.00
558 559 0.034059 CGGCACAGTCTTTCAGAGGT 59.966 55.000 0.00 0.00 0.00 3.85
559 560 0.318441 TCGGCACAGTCTTTCAGAGG 59.682 55.000 0.00 0.00 0.00 3.69
560 561 2.154854 TTCGGCACAGTCTTTCAGAG 57.845 50.000 0.00 0.00 0.00 3.35
561 562 2.613026 TTTCGGCACAGTCTTTCAGA 57.387 45.000 0.00 0.00 0.00 3.27
562 563 2.160417 GGATTTCGGCACAGTCTTTCAG 59.840 50.000 0.00 0.00 0.00 3.02
563 564 2.151202 GGATTTCGGCACAGTCTTTCA 58.849 47.619 0.00 0.00 0.00 2.69
564 565 2.160417 CAGGATTTCGGCACAGTCTTTC 59.840 50.000 0.00 0.00 0.00 2.62
565 566 2.154462 CAGGATTTCGGCACAGTCTTT 58.846 47.619 0.00 0.00 0.00 2.52
566 567 1.347707 TCAGGATTTCGGCACAGTCTT 59.652 47.619 0.00 0.00 0.00 3.01
567 568 0.976641 TCAGGATTTCGGCACAGTCT 59.023 50.000 0.00 0.00 0.00 3.24
568 569 1.808411 TTCAGGATTTCGGCACAGTC 58.192 50.000 0.00 0.00 0.00 3.51
569 570 2.270352 TTTCAGGATTTCGGCACAGT 57.730 45.000 0.00 0.00 0.00 3.55
570 571 4.963276 TTATTTCAGGATTTCGGCACAG 57.037 40.909 0.00 0.00 0.00 3.66
571 572 5.649557 CATTTATTTCAGGATTTCGGCACA 58.350 37.500 0.00 0.00 0.00 4.57
572 573 4.504097 GCATTTATTTCAGGATTTCGGCAC 59.496 41.667 0.00 0.00 0.00 5.01
573 574 4.681744 GCATTTATTTCAGGATTTCGGCA 58.318 39.130 0.00 0.00 0.00 5.69
574 575 3.730715 CGCATTTATTTCAGGATTTCGGC 59.269 43.478 0.00 0.00 0.00 5.54
575 576 5.168526 TCGCATTTATTTCAGGATTTCGG 57.831 39.130 0.00 0.00 0.00 4.30
576 577 4.672413 GCTCGCATTTATTTCAGGATTTCG 59.328 41.667 0.00 0.00 0.00 3.46
577 578 5.456822 GTGCTCGCATTTATTTCAGGATTTC 59.543 40.000 0.00 0.00 0.00 2.17
578 579 5.343249 GTGCTCGCATTTATTTCAGGATTT 58.657 37.500 0.00 0.00 0.00 2.17
579 580 4.202050 GGTGCTCGCATTTATTTCAGGATT 60.202 41.667 0.00 0.00 0.00 3.01
580 581 3.316308 GGTGCTCGCATTTATTTCAGGAT 59.684 43.478 0.00 0.00 0.00 3.24
581 582 2.682856 GGTGCTCGCATTTATTTCAGGA 59.317 45.455 0.00 0.00 0.00 3.86
582 583 2.423185 TGGTGCTCGCATTTATTTCAGG 59.577 45.455 0.00 0.00 0.00 3.86
583 584 3.488047 CCTGGTGCTCGCATTTATTTCAG 60.488 47.826 0.00 0.00 0.00 3.02
584 585 2.423185 CCTGGTGCTCGCATTTATTTCA 59.577 45.455 0.00 0.00 0.00 2.69
585 586 2.682856 TCCTGGTGCTCGCATTTATTTC 59.317 45.455 0.00 0.00 0.00 2.17
586 587 2.722094 TCCTGGTGCTCGCATTTATTT 58.278 42.857 0.00 0.00 0.00 1.40
587 588 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
588 589 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
589 590 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
590 591 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
591 592 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
592 593 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
593 594 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
594 595 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
595 596 1.734465 GAGTTCAAATCCTGGTGCTCG 59.266 52.381 0.00 0.00 0.00 5.03
596 597 2.746362 CAGAGTTCAAATCCTGGTGCTC 59.254 50.000 0.00 0.00 0.00 4.26
597 598 2.373169 TCAGAGTTCAAATCCTGGTGCT 59.627 45.455 0.00 0.00 0.00 4.40
598 599 2.783135 TCAGAGTTCAAATCCTGGTGC 58.217 47.619 0.00 0.00 0.00 5.01
599 600 3.693085 CCATCAGAGTTCAAATCCTGGTG 59.307 47.826 0.00 0.00 37.47 4.17
600 601 3.308688 CCCATCAGAGTTCAAATCCTGGT 60.309 47.826 0.00 0.00 0.00 4.00
601 602 3.285484 CCCATCAGAGTTCAAATCCTGG 58.715 50.000 0.00 0.00 0.00 4.45
602 603 2.686915 GCCCATCAGAGTTCAAATCCTG 59.313 50.000 0.00 0.00 0.00 3.86
603 604 2.579860 AGCCCATCAGAGTTCAAATCCT 59.420 45.455 0.00 0.00 0.00 3.24
604 605 2.686915 CAGCCCATCAGAGTTCAAATCC 59.313 50.000 0.00 0.00 0.00 3.01
605 606 2.686915 CCAGCCCATCAGAGTTCAAATC 59.313 50.000 0.00 0.00 0.00 2.17
606 607 2.622452 CCCAGCCCATCAGAGTTCAAAT 60.622 50.000 0.00 0.00 0.00 2.32
607 608 1.272092 CCCAGCCCATCAGAGTTCAAA 60.272 52.381 0.00 0.00 0.00 2.69
608 609 0.329261 CCCAGCCCATCAGAGTTCAA 59.671 55.000 0.00 0.00 0.00 2.69
609 610 1.565390 CCCCAGCCCATCAGAGTTCA 61.565 60.000 0.00 0.00 0.00 3.18
610 611 1.225704 CCCCAGCCCATCAGAGTTC 59.774 63.158 0.00 0.00 0.00 3.01
611 612 0.625683 ATCCCCAGCCCATCAGAGTT 60.626 55.000 0.00 0.00 0.00 3.01
612 613 0.268869 TATCCCCAGCCCATCAGAGT 59.731 55.000 0.00 0.00 0.00 3.24
613 614 0.689623 GTATCCCCAGCCCATCAGAG 59.310 60.000 0.00 0.00 0.00 3.35
614 615 0.768221 GGTATCCCCAGCCCATCAGA 60.768 60.000 0.00 0.00 0.00 3.27
615 616 1.061905 TGGTATCCCCAGCCCATCAG 61.062 60.000 0.00 0.00 38.72 2.90
616 617 1.005423 TGGTATCCCCAGCCCATCA 59.995 57.895 0.00 0.00 38.72 3.07
617 618 1.352622 TGTGGTATCCCCAGCCCATC 61.353 60.000 0.00 0.00 46.45 3.51
618 619 1.308657 TGTGGTATCCCCAGCCCAT 60.309 57.895 0.00 0.00 46.45 4.00
619 620 2.000701 CTGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
620 621 1.984288 GACTGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
621 622 1.527370 GACTGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
622 623 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
627 628 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
628 629 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
629 630 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
630 631 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
631 632 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
632 633 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
633 634 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
634 635 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
635 636 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
637 638 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
638 639 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
639 640 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
640 641 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
641 642 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
642 643 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
643 644 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
656 657 0.876777 TACACGCGAACCAACCTGTG 60.877 55.000 15.93 0.00 0.00 3.66
657 658 0.877213 GTACACGCGAACCAACCTGT 60.877 55.000 15.93 6.53 0.00 4.00
658 659 0.599204 AGTACACGCGAACCAACCTG 60.599 55.000 15.93 0.00 0.00 4.00
659 660 0.105408 AAGTACACGCGAACCAACCT 59.895 50.000 15.93 0.00 0.00 3.50
660 661 0.939419 AAAGTACACGCGAACCAACC 59.061 50.000 15.93 0.00 0.00 3.77
661 662 2.742954 AAAAGTACACGCGAACCAAC 57.257 45.000 15.93 3.24 0.00 3.77
685 686 4.201881 ACGTACACTTTTCTTTGAGGCAAC 60.202 41.667 0.00 0.00 0.00 4.17
686 687 3.942748 ACGTACACTTTTCTTTGAGGCAA 59.057 39.130 0.00 0.00 0.00 4.52
687 688 3.537580 ACGTACACTTTTCTTTGAGGCA 58.462 40.909 0.00 0.00 0.00 4.75
688 689 4.547406 AACGTACACTTTTCTTTGAGGC 57.453 40.909 0.00 0.00 0.00 4.70
778 787 8.204836 ACTATAGAGATAGCACGGAACATTTTT 58.795 33.333 6.78 0.00 39.00 1.94
850 860 2.303022 TCCTTAGGAGTCAAAGGTGCTG 59.697 50.000 18.23 0.00 42.47 4.41
953 2849 1.140375 GGGTCGATGTGGGACGTAC 59.860 63.158 0.00 0.00 35.24 3.67
1103 3017 2.885266 GGGTCTGTTTCTTCTTGGTTCC 59.115 50.000 0.00 0.00 0.00 3.62
1203 3118 2.750237 GGGAAGCCGCCGAACAAT 60.750 61.111 0.00 0.00 0.00 2.71
1230 3145 4.247380 CCGGGGATCTGAGGCAGC 62.247 72.222 0.00 0.00 0.00 5.25
1297 3213 3.399181 GTGTGGGATGCCGGGAGA 61.399 66.667 2.18 0.00 0.00 3.71
1306 3231 2.355115 GGGCGGAAAGTGTGGGAT 59.645 61.111 0.00 0.00 0.00 3.85
1380 3305 2.410469 GGCGCCATCTGCATCAAC 59.590 61.111 24.80 0.00 41.33 3.18
1398 3323 1.080025 GGTGAGGTAGTCCACGCAC 60.080 63.158 0.00 0.00 36.72 5.34
1535 3460 2.266055 GGATCGGATCGATGGGCC 59.734 66.667 0.54 0.00 47.00 5.80
1618 3543 2.729882 CACGTAAAAGCTGCGACTTACT 59.270 45.455 14.88 4.91 36.53 2.24
1625 3550 1.440353 GGCACACGTAAAAGCTGCG 60.440 57.895 0.00 0.00 39.33 5.18
1641 3854 2.034179 AGAACAAAACCGTAGCAAAGGC 59.966 45.455 0.00 0.00 41.61 4.35
1644 3857 4.142643 ACGAAAGAACAAAACCGTAGCAAA 60.143 37.500 0.00 0.00 0.00 3.68
1703 3916 0.320374 CGGTAGGGTTTGAGCTGTGA 59.680 55.000 0.00 0.00 0.00 3.58
1704 3917 1.298859 GCGGTAGGGTTTGAGCTGTG 61.299 60.000 0.00 0.00 0.00 3.66
1759 3993 2.182030 CGGAGACACGGGAGAAGC 59.818 66.667 0.00 0.00 0.00 3.86
1817 4051 1.199097 GGCTGGTGTGTTTACGGATTG 59.801 52.381 0.00 0.00 0.00 2.67
1822 4057 1.588674 TTCAGGCTGGTGTGTTTACG 58.411 50.000 15.73 0.00 0.00 3.18
1855 4090 6.996879 GGATATTATAGAGGACATGCATGCAT 59.003 38.462 27.46 27.46 37.08 3.96
1856 4091 6.157471 AGGATATTATAGAGGACATGCATGCA 59.843 38.462 26.53 25.04 0.00 3.96
1858 4093 9.708092 CATAGGATATTATAGAGGACATGCATG 57.292 37.037 25.09 25.09 0.00 4.06
1859 4094 9.444668 ACATAGGATATTATAGAGGACATGCAT 57.555 33.333 0.00 0.00 0.00 3.96
1903 4138 2.498885 GGATGCCTCTGCCAAGAAAAAT 59.501 45.455 0.00 0.00 36.33 1.82
1933 4168 3.795623 AACCATGCATCATCTTCTTGC 57.204 42.857 0.00 0.00 36.91 4.01
1942 4177 2.874014 TCTTCACCAAACCATGCATCA 58.126 42.857 0.00 0.00 0.00 3.07
1974 4233 6.183360 GGCTATGCAACTAAACATCAACTGAT 60.183 38.462 0.00 0.00 34.56 2.90
2022 4288 6.897706 ACTCGGGAATATCCTTAGTACTTC 57.102 41.667 0.00 0.00 36.57 3.01
2041 4315 2.002586 CTCCATGGCTGTGTAAACTCG 58.997 52.381 6.96 0.00 0.00 4.18
2051 4325 2.887783 ACGACTATACTCTCCATGGCTG 59.112 50.000 6.96 2.21 0.00 4.85
2071 4345 5.634020 GCTATCCATTGACGACCTTATACAC 59.366 44.000 0.00 0.00 0.00 2.90
2167 4445 0.179108 CGGTCAGCCTGGTAAGCTAC 60.179 60.000 0.00 0.00 38.95 3.58
2168 4446 1.956629 GCGGTCAGCCTGGTAAGCTA 61.957 60.000 0.00 0.00 38.95 3.32
2169 4447 2.982130 CGGTCAGCCTGGTAAGCT 59.018 61.111 0.00 0.00 42.70 3.74
2170 4448 2.820037 GCGGTCAGCCTGGTAAGC 60.820 66.667 0.00 0.00 40.81 3.09
2180 4458 4.398549 TTCATTTTTACGAAGCGGTCAG 57.601 40.909 0.00 0.00 0.00 3.51
2182 4460 4.965062 TCATTCATTTTTACGAAGCGGTC 58.035 39.130 0.00 0.00 0.00 4.79
2183 4461 5.365403 TTCATTCATTTTTACGAAGCGGT 57.635 34.783 0.00 0.00 0.00 5.68
2184 4462 6.869421 AATTCATTCATTTTTACGAAGCGG 57.131 33.333 0.00 0.00 0.00 5.52
2185 4463 7.719538 ACAAATTCATTCATTTTTACGAAGCG 58.280 30.769 0.00 0.00 0.00 4.68
2204 4482 9.787532 GCAACACAGATGTATATACAACAAATT 57.212 29.630 19.11 1.91 38.45 1.82
2205 4483 9.177608 AGCAACACAGATGTATATACAACAAAT 57.822 29.630 19.11 2.66 38.45 2.32
2206 4484 8.560355 AGCAACACAGATGTATATACAACAAA 57.440 30.769 19.11 0.00 38.45 2.83
2207 4485 8.450180 CAAGCAACACAGATGTATATACAACAA 58.550 33.333 19.11 0.00 38.45 2.83
2208 4486 7.606073 ACAAGCAACACAGATGTATATACAACA 59.394 33.333 19.11 0.00 38.45 3.33
2209 4487 7.904977 CACAAGCAACACAGATGTATATACAAC 59.095 37.037 19.11 16.23 38.45 3.32
2210 4488 7.606073 ACACAAGCAACACAGATGTATATACAA 59.394 33.333 19.11 3.83 38.45 2.41
2211 4489 7.102993 ACACAAGCAACACAGATGTATATACA 58.897 34.615 17.65 17.65 38.45 2.29
2218 4548 3.016031 TGAACACAAGCAACACAGATGT 58.984 40.909 0.00 0.00 42.46 3.06
2233 4563 5.961395 TCACGACTTCTAAGTTTGAACAC 57.039 39.130 0.00 0.00 39.88 3.32
2264 4594 4.444838 CCACGATGGCCGGTTCGA 62.445 66.667 24.03 0.00 43.93 3.71
2269 4599 2.359354 TTGTTCCACGATGGCCGG 60.359 61.111 0.00 0.00 43.93 6.13
2331 4785 2.301577 ACAGAGGCTCGTTATTCTGC 57.698 50.000 9.22 0.00 40.47 4.26
2383 4837 2.178273 GCATTTCGTTCGTGGGCC 59.822 61.111 0.00 0.00 0.00 5.80
2459 4940 2.050144 TGGAAGAAGCAGACAGACCTT 58.950 47.619 0.00 0.00 0.00 3.50
2461 4942 1.802069 GTGGAAGAAGCAGACAGACC 58.198 55.000 0.00 0.00 0.00 3.85
2468 4956 1.337817 CGTCGACGTGGAAGAAGCAG 61.338 60.000 29.08 0.00 34.11 4.24
2618 5106 1.002087 CACAACTAGGAGGCGGTTCTT 59.998 52.381 0.00 0.00 0.00 2.52
2624 5112 0.456312 GTCGACACAACTAGGAGGCG 60.456 60.000 11.55 0.00 0.00 5.52
2638 5126 2.129823 TTTCCAACTCGACAGTCGAC 57.870 50.000 21.92 7.70 44.82 4.20
2641 5129 4.813296 ACATTTTTCCAACTCGACAGTC 57.187 40.909 0.00 0.00 29.93 3.51
2643 5131 6.020678 GTGAAAACATTTTTCCAACTCGACAG 60.021 38.462 8.53 0.00 0.00 3.51
2682 5173 6.164876 TCCATATGGTGAAACATTTTTGCAG 58.835 36.000 21.28 0.00 39.98 4.41
2683 5174 6.106648 TCCATATGGTGAAACATTTTTGCA 57.893 33.333 21.28 0.00 39.98 4.08
2684 5175 7.432350 TTTCCATATGGTGAAACATTTTTGC 57.568 32.000 21.28 0.00 39.98 3.68
2688 5179 8.650490 GGGATATTTCCATATGGTGAAACATTT 58.350 33.333 21.28 3.80 44.60 2.32
2689 5180 7.039784 CGGGATATTTCCATATGGTGAAACATT 60.040 37.037 21.28 4.12 44.60 2.71
2690 5181 6.434028 CGGGATATTTCCATATGGTGAAACAT 59.566 38.462 21.28 10.15 44.60 2.71
2691 5182 5.767665 CGGGATATTTCCATATGGTGAAACA 59.232 40.000 21.28 5.54 44.60 2.83
2692 5183 6.001460 TCGGGATATTTCCATATGGTGAAAC 58.999 40.000 21.28 9.65 44.60 2.78
2693 5184 6.001460 GTCGGGATATTTCCATATGGTGAAA 58.999 40.000 21.28 15.22 44.60 2.69
2694 5185 5.556915 GTCGGGATATTTCCATATGGTGAA 58.443 41.667 21.28 16.65 44.60 3.18
2695 5186 4.322424 CGTCGGGATATTTCCATATGGTGA 60.322 45.833 21.28 11.43 44.60 4.02
2696 5187 3.932710 CGTCGGGATATTTCCATATGGTG 59.067 47.826 21.28 0.00 44.60 4.17
2697 5188 3.055385 CCGTCGGGATATTTCCATATGGT 60.055 47.826 21.28 5.10 44.60 3.55
2698 5189 3.055385 ACCGTCGGGATATTTCCATATGG 60.055 47.826 16.25 16.25 44.60 2.74
2699 5190 3.932710 CACCGTCGGGATATTTCCATATG 59.067 47.826 17.28 0.00 44.60 1.78
2700 5191 3.581332 ACACCGTCGGGATATTTCCATAT 59.419 43.478 17.28 0.00 44.60 1.78
2701 5192 2.967201 ACACCGTCGGGATATTTCCATA 59.033 45.455 17.28 0.00 44.60 2.74
2702 5193 1.766496 ACACCGTCGGGATATTTCCAT 59.234 47.619 17.28 0.00 44.60 3.41
2703 5194 1.196911 ACACCGTCGGGATATTTCCA 58.803 50.000 17.28 0.00 44.60 3.53
2704 5195 3.672767 ATACACCGTCGGGATATTTCC 57.327 47.619 17.28 0.00 41.77 3.13
2705 5196 6.146673 CCTTTTATACACCGTCGGGATATTTC 59.853 42.308 17.28 0.00 36.97 2.17
2706 5197 5.993441 CCTTTTATACACCGTCGGGATATTT 59.007 40.000 17.28 0.00 36.97 1.40
2707 5198 5.305128 TCCTTTTATACACCGTCGGGATATT 59.695 40.000 17.28 0.00 36.97 1.28
2708 5199 4.834496 TCCTTTTATACACCGTCGGGATAT 59.166 41.667 17.28 14.44 36.97 1.63
2709 5200 4.037923 GTCCTTTTATACACCGTCGGGATA 59.962 45.833 17.28 7.73 36.97 2.59
2710 5201 3.033184 TCCTTTTATACACCGTCGGGAT 58.967 45.455 17.28 8.43 36.97 3.85
2711 5202 2.166254 GTCCTTTTATACACCGTCGGGA 59.834 50.000 17.28 0.18 36.97 5.14
2726 5217 7.778382 ACTGGTGTTAATTTCTAACTGTCCTTT 59.222 33.333 0.00 0.00 0.00 3.11
2729 5220 7.360361 CAACTGGTGTTAATTTCTAACTGTCC 58.640 38.462 0.00 0.00 34.60 4.02
2786 5277 2.873094 ACCACCCTAGCTAACAAACC 57.127 50.000 0.00 0.00 0.00 3.27
2790 5281 4.955450 TCGTAAATACCACCCTAGCTAACA 59.045 41.667 0.00 0.00 0.00 2.41
2801 5292 5.297527 CCATTTAGGGGTTCGTAAATACCAC 59.702 44.000 0.00 0.00 40.09 4.16
2810 5301 8.856103 CATATAAAATTCCATTTAGGGGTTCGT 58.144 33.333 0.00 0.00 38.24 3.85
2820 5312 9.707957 TCACCCAGTACATATAAAATTCCATTT 57.292 29.630 0.00 0.00 0.00 2.32
2821 5313 9.354673 CTCACCCAGTACATATAAAATTCCATT 57.645 33.333 0.00 0.00 0.00 3.16
2849 5341 6.279513 TGGCAGTTAAAAATACCAATCCAG 57.720 37.500 0.00 0.00 0.00 3.86
2864 5356 9.553064 AAAAATTAAACAATGACATGGCAGTTA 57.447 25.926 7.63 0.00 0.00 2.24
2867 5359 7.116090 TCGAAAAATTAAACAATGACATGGCAG 59.884 33.333 7.63 0.00 0.00 4.85
2869 5361 7.344910 TCGAAAAATTAAACAATGACATGGC 57.655 32.000 0.00 0.00 0.00 4.40
2890 5382 2.060050 TTTTGCCAAAACCTCCTCGA 57.940 45.000 0.00 0.00 0.00 4.04
2891 5383 2.880963 TTTTTGCCAAAACCTCCTCG 57.119 45.000 1.25 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.