Multiple sequence alignment - TraesCS5D01G325900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G325900 chr5D 100.000 3477 0 0 1 3477 418289077 418285601 0.000000e+00 6421
1 TraesCS5D01G325900 chr5A 88.683 2536 145 54 238 2686 533073916 533071436 0.000000e+00 2963
2 TraesCS5D01G325900 chr5A 86.920 474 28 9 2904 3374 533071219 533070777 5.180000e-138 501
3 TraesCS5D01G325900 chr5B 88.288 2348 128 60 409 2686 505567274 505565004 0.000000e+00 2676
4 TraesCS5D01G325900 chr5B 85.240 603 49 21 2777 3374 505564883 505564316 5.000000e-163 584
5 TraesCS5D01G325900 chr5B 85.561 187 14 5 189 371 505567454 505567277 2.130000e-42 183
6 TraesCS5D01G325900 chr5B 94.444 108 4 1 3372 3477 516704819 516704712 7.720000e-37 165
7 TraesCS5D01G325900 chr5B 94.444 108 4 1 3372 3477 516718889 516718782 7.720000e-37 165
8 TraesCS5D01G325900 chr5B 93.458 107 6 1 3371 3477 517851930 517851825 1.290000e-34 158
9 TraesCS5D01G325900 chr6D 96.226 106 3 1 3373 3477 454649947 454650052 4.610000e-39 172
10 TraesCS5D01G325900 chr6D 94.444 108 4 1 3372 3477 64599173 64599066 7.720000e-37 165
11 TraesCS5D01G325900 chr7D 95.370 108 3 1 3372 3477 8075928 8076035 1.660000e-38 171
12 TraesCS5D01G325900 chr4D 95.283 106 4 1 3373 3477 477501084 477501189 2.150000e-37 167
13 TraesCS5D01G325900 chr4B 93.694 111 6 1 3368 3477 610786845 610786735 7.720000e-37 165
14 TraesCS5D01G325900 chr1D 93.578 109 5 1 3371 3477 4577296 4577188 9.990000e-36 161


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G325900 chr5D 418285601 418289077 3476 True 6421.000000 6421 100.0000 1 3477 1 chr5D.!!$R1 3476
1 TraesCS5D01G325900 chr5A 533070777 533073916 3139 True 1732.000000 2963 87.8015 238 3374 2 chr5A.!!$R1 3136
2 TraesCS5D01G325900 chr5B 505564316 505567454 3138 True 1147.666667 2676 86.3630 189 3374 3 chr5B.!!$R4 3185

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 163 0.033920 ATGACGAGCACAGTTGAGCA 59.966 50.0 4.45 0.0 34.0 4.26 F
163 164 0.033920 TGACGAGCACAGTTGAGCAT 59.966 50.0 4.45 0.0 34.0 3.79 F
1177 1232 0.547075 CCACCGTCTCCTCCTCTCTA 59.453 60.0 0.00 0.0 0.0 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1829 1912 0.251165 GGCCTAGTTCAAAGCCCACA 60.251 55.000 0.0 0.0 39.6 4.17 R
2061 2150 2.034558 TGCCAAAAGAACAAGCAGCTAC 59.965 45.455 0.0 0.0 0.0 3.58 R
3000 3198 0.034059 ACACGCTTTCACCTCCAGAG 59.966 55.000 0.0 0.0 0.0 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.140325 CCAAAACTGAGGCAACCTAGA 57.860 47.619 0.00 0.00 31.76 2.43
23 24 2.814336 CCAAAACTGAGGCAACCTAGAC 59.186 50.000 0.00 0.00 31.76 2.59
24 25 2.457366 AAACTGAGGCAACCTAGACG 57.543 50.000 0.00 0.00 31.76 4.18
25 26 1.629043 AACTGAGGCAACCTAGACGA 58.371 50.000 0.00 0.00 31.76 4.20
26 27 1.178276 ACTGAGGCAACCTAGACGAG 58.822 55.000 0.00 0.00 31.76 4.18
27 28 0.179124 CTGAGGCAACCTAGACGAGC 60.179 60.000 0.00 0.00 31.76 5.03
28 29 0.898326 TGAGGCAACCTAGACGAGCA 60.898 55.000 0.00 0.00 31.76 4.26
29 30 0.458716 GAGGCAACCTAGACGAGCAC 60.459 60.000 0.00 0.00 31.76 4.40
30 31 1.185618 AGGCAACCTAGACGAGCACA 61.186 55.000 0.00 0.00 28.47 4.57
31 32 0.320421 GGCAACCTAGACGAGCACAA 60.320 55.000 0.00 0.00 0.00 3.33
32 33 1.676014 GGCAACCTAGACGAGCACAAT 60.676 52.381 0.00 0.00 0.00 2.71
33 34 2.418197 GGCAACCTAGACGAGCACAATA 60.418 50.000 0.00 0.00 0.00 1.90
34 35 3.259064 GCAACCTAGACGAGCACAATAA 58.741 45.455 0.00 0.00 0.00 1.40
35 36 3.682858 GCAACCTAGACGAGCACAATAAA 59.317 43.478 0.00 0.00 0.00 1.40
36 37 4.153475 GCAACCTAGACGAGCACAATAAAA 59.847 41.667 0.00 0.00 0.00 1.52
37 38 5.163754 GCAACCTAGACGAGCACAATAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
38 39 6.036735 GCAACCTAGACGAGCACAATAAAATA 59.963 38.462 0.00 0.00 0.00 1.40
39 40 7.399523 CAACCTAGACGAGCACAATAAAATAC 58.600 38.462 0.00 0.00 0.00 1.89
40 41 6.047231 ACCTAGACGAGCACAATAAAATACC 58.953 40.000 0.00 0.00 0.00 2.73
41 42 6.046593 CCTAGACGAGCACAATAAAATACCA 58.953 40.000 0.00 0.00 0.00 3.25
42 43 5.796350 AGACGAGCACAATAAAATACCAC 57.204 39.130 0.00 0.00 0.00 4.16
43 44 5.488341 AGACGAGCACAATAAAATACCACT 58.512 37.500 0.00 0.00 0.00 4.00
44 45 5.938125 AGACGAGCACAATAAAATACCACTT 59.062 36.000 0.00 0.00 0.00 3.16
45 46 6.430000 AGACGAGCACAATAAAATACCACTTT 59.570 34.615 0.00 0.00 0.00 2.66
46 47 6.378582 ACGAGCACAATAAAATACCACTTTG 58.621 36.000 0.00 0.00 0.00 2.77
47 48 6.016610 ACGAGCACAATAAAATACCACTTTGT 60.017 34.615 0.00 0.00 0.00 2.83
48 49 6.523201 CGAGCACAATAAAATACCACTTTGTC 59.477 38.462 0.00 0.00 0.00 3.18
49 50 6.687604 AGCACAATAAAATACCACTTTGTCC 58.312 36.000 0.00 0.00 0.00 4.02
50 51 5.867174 GCACAATAAAATACCACTTTGTCCC 59.133 40.000 0.00 0.00 0.00 4.46
51 52 6.090129 CACAATAAAATACCACTTTGTCCCG 58.910 40.000 0.00 0.00 0.00 5.14
52 53 5.771165 ACAATAAAATACCACTTTGTCCCGT 59.229 36.000 0.00 0.00 0.00 5.28
53 54 6.941436 ACAATAAAATACCACTTTGTCCCGTA 59.059 34.615 0.00 0.00 0.00 4.02
54 55 7.612633 ACAATAAAATACCACTTTGTCCCGTAT 59.387 33.333 0.00 0.00 0.00 3.06
55 56 9.111613 CAATAAAATACCACTTTGTCCCGTATA 57.888 33.333 0.00 0.00 0.00 1.47
56 57 9.683870 AATAAAATACCACTTTGTCCCGTATAA 57.316 29.630 0.00 0.00 0.00 0.98
57 58 6.990341 AAATACCACTTTGTCCCGTATAAC 57.010 37.500 0.00 0.00 0.00 1.89
58 59 3.339253 ACCACTTTGTCCCGTATAACC 57.661 47.619 0.00 0.00 0.00 2.85
59 60 2.908351 ACCACTTTGTCCCGTATAACCT 59.092 45.455 0.00 0.00 0.00 3.50
60 61 4.095946 ACCACTTTGTCCCGTATAACCTA 58.904 43.478 0.00 0.00 0.00 3.08
61 62 4.531732 ACCACTTTGTCCCGTATAACCTAA 59.468 41.667 0.00 0.00 0.00 2.69
62 63 5.114081 CCACTTTGTCCCGTATAACCTAAG 58.886 45.833 0.00 0.00 0.00 2.18
63 64 5.105228 CCACTTTGTCCCGTATAACCTAAGA 60.105 44.000 0.00 0.00 0.00 2.10
64 65 5.809051 CACTTTGTCCCGTATAACCTAAGAC 59.191 44.000 0.00 0.00 0.00 3.01
65 66 4.637483 TTGTCCCGTATAACCTAAGACG 57.363 45.455 0.00 0.00 35.12 4.18
66 67 3.620488 TGTCCCGTATAACCTAAGACGT 58.380 45.455 0.00 0.00 33.51 4.34
67 68 4.016444 TGTCCCGTATAACCTAAGACGTT 58.984 43.478 0.00 0.00 33.51 3.99
68 69 4.462483 TGTCCCGTATAACCTAAGACGTTT 59.538 41.667 0.00 0.00 33.51 3.60
69 70 5.047377 TGTCCCGTATAACCTAAGACGTTTT 60.047 40.000 0.00 0.00 33.51 2.43
70 71 5.869344 GTCCCGTATAACCTAAGACGTTTTT 59.131 40.000 0.00 0.00 33.51 1.94
71 72 5.868801 TCCCGTATAACCTAAGACGTTTTTG 59.131 40.000 0.00 0.00 33.51 2.44
72 73 5.446340 CCCGTATAACCTAAGACGTTTTTGC 60.446 44.000 0.00 0.00 33.51 3.68
73 74 5.120519 CCGTATAACCTAAGACGTTTTTGCA 59.879 40.000 0.00 0.00 33.51 4.08
74 75 6.238508 CGTATAACCTAAGACGTTTTTGCAG 58.761 40.000 0.00 0.00 0.00 4.41
75 76 6.128742 CGTATAACCTAAGACGTTTTTGCAGT 60.129 38.462 0.00 0.00 0.00 4.40
76 77 4.547406 AACCTAAGACGTTTTTGCAGTC 57.453 40.909 0.00 0.00 35.30 3.51
77 78 3.805207 ACCTAAGACGTTTTTGCAGTCT 58.195 40.909 0.00 0.00 46.01 3.24
89 90 9.826574 ACGTTTTTGCAGTCTTATATTATAGGA 57.173 29.630 0.00 0.00 0.00 2.94
92 93 8.827177 TTTTGCAGTCTTATATTATAGGACGG 57.173 34.615 16.48 16.48 32.86 4.79
93 94 6.525578 TGCAGTCTTATATTATAGGACGGG 57.474 41.667 19.89 15.99 32.86 5.28
94 95 6.250711 TGCAGTCTTATATTATAGGACGGGA 58.749 40.000 19.89 16.70 32.86 5.14
95 96 6.377429 TGCAGTCTTATATTATAGGACGGGAG 59.623 42.308 19.89 12.93 32.86 4.30
96 97 6.183360 GCAGTCTTATATTATAGGACGGGAGG 60.183 46.154 19.89 11.11 32.86 4.30
97 98 7.117397 CAGTCTTATATTATAGGACGGGAGGA 58.883 42.308 16.06 0.00 32.86 3.71
98 99 7.283580 CAGTCTTATATTATAGGACGGGAGGAG 59.716 44.444 16.06 3.57 32.86 3.69
99 100 7.036717 AGTCTTATATTATAGGACGGGAGGAGT 60.037 40.741 16.06 0.00 32.86 3.85
100 101 8.270744 GTCTTATATTATAGGACGGGAGGAGTA 58.729 40.741 9.42 0.00 0.00 2.59
101 102 9.011860 TCTTATATTATAGGACGGGAGGAGTAT 57.988 37.037 0.00 0.00 0.00 2.12
102 103 9.643735 CTTATATTATAGGACGGGAGGAGTATT 57.356 37.037 0.00 0.00 0.00 1.89
104 105 8.912614 ATATTATAGGACGGGAGGAGTATTTT 57.087 34.615 0.00 0.00 0.00 1.82
105 106 7.628501 ATTATAGGACGGGAGGAGTATTTTT 57.371 36.000 0.00 0.00 0.00 1.94
128 129 7.630242 TTTTTGCATGATAGGAACTCCTTAG 57.370 36.000 3.00 0.00 46.09 2.18
129 130 5.957771 TTGCATGATAGGAACTCCTTAGT 57.042 39.130 3.00 0.00 46.09 2.24
130 131 7.432148 TTTGCATGATAGGAACTCCTTAGTA 57.568 36.000 3.00 0.00 46.09 1.82
131 132 7.432148 TTGCATGATAGGAACTCCTTAGTAA 57.568 36.000 3.00 0.00 46.09 2.24
132 133 7.432148 TGCATGATAGGAACTCCTTAGTAAA 57.568 36.000 3.00 0.00 46.09 2.01
133 134 7.857456 TGCATGATAGGAACTCCTTAGTAAAA 58.143 34.615 3.00 0.00 46.09 1.52
134 135 8.325787 TGCATGATAGGAACTCCTTAGTAAAAA 58.674 33.333 3.00 0.00 46.09 1.94
135 136 9.343539 GCATGATAGGAACTCCTTAGTAAAAAT 57.656 33.333 3.00 0.00 46.09 1.82
153 154 9.769093 AGTAAAAATGTAAAATATGACGAGCAC 57.231 29.630 0.00 0.00 0.00 4.40
154 155 9.549509 GTAAAAATGTAAAATATGACGAGCACA 57.450 29.630 0.00 0.00 0.00 4.57
155 156 8.673626 AAAAATGTAAAATATGACGAGCACAG 57.326 30.769 0.00 0.00 0.00 3.66
156 157 6.985188 AATGTAAAATATGACGAGCACAGT 57.015 33.333 0.00 0.00 0.00 3.55
157 158 6.985188 ATGTAAAATATGACGAGCACAGTT 57.015 33.333 0.00 0.00 0.00 3.16
158 159 6.164408 TGTAAAATATGACGAGCACAGTTG 57.836 37.500 0.00 0.00 0.00 3.16
159 160 5.929415 TGTAAAATATGACGAGCACAGTTGA 59.071 36.000 0.00 0.00 0.00 3.18
160 161 5.536554 AAAATATGACGAGCACAGTTGAG 57.463 39.130 0.00 0.00 0.00 3.02
161 162 1.996292 TATGACGAGCACAGTTGAGC 58.004 50.000 0.00 0.00 0.00 4.26
162 163 0.033920 ATGACGAGCACAGTTGAGCA 59.966 50.000 4.45 0.00 34.00 4.26
163 164 0.033920 TGACGAGCACAGTTGAGCAT 59.966 50.000 4.45 0.00 34.00 3.79
164 165 1.272212 TGACGAGCACAGTTGAGCATA 59.728 47.619 4.45 0.00 34.00 3.14
165 166 2.094026 TGACGAGCACAGTTGAGCATAT 60.094 45.455 4.45 0.00 34.00 1.78
166 167 2.932614 GACGAGCACAGTTGAGCATATT 59.067 45.455 4.45 0.00 34.00 1.28
167 168 3.338249 ACGAGCACAGTTGAGCATATTT 58.662 40.909 4.45 0.00 34.00 1.40
168 169 3.753272 ACGAGCACAGTTGAGCATATTTT 59.247 39.130 4.45 0.00 34.00 1.82
169 170 4.093514 CGAGCACAGTTGAGCATATTTTG 58.906 43.478 4.45 0.00 34.00 2.44
170 171 4.418392 GAGCACAGTTGAGCATATTTTGG 58.582 43.478 4.45 0.00 34.00 3.28
171 172 3.828451 AGCACAGTTGAGCATATTTTGGT 59.172 39.130 4.45 0.00 39.22 3.67
172 173 3.922240 GCACAGTTGAGCATATTTTGGTG 59.078 43.478 0.00 0.00 35.82 4.17
173 174 4.487948 CACAGTTGAGCATATTTTGGTGG 58.512 43.478 0.00 0.00 35.82 4.61
174 175 3.511146 ACAGTTGAGCATATTTTGGTGGG 59.489 43.478 0.00 0.00 35.82 4.61
175 176 3.763360 CAGTTGAGCATATTTTGGTGGGA 59.237 43.478 0.00 0.00 35.82 4.37
176 177 4.220382 CAGTTGAGCATATTTTGGTGGGAA 59.780 41.667 0.00 0.00 35.82 3.97
177 178 4.837860 AGTTGAGCATATTTTGGTGGGAAA 59.162 37.500 0.00 0.00 35.82 3.13
178 179 5.306678 AGTTGAGCATATTTTGGTGGGAAAA 59.693 36.000 0.00 0.00 35.82 2.29
179 180 5.815233 TGAGCATATTTTGGTGGGAAAAA 57.185 34.783 0.00 0.00 35.82 1.94
205 206 2.034221 AGGCTGCCCCGAAAGAAC 59.966 61.111 16.57 0.00 39.21 3.01
207 208 2.626780 GGCTGCCCCGAAAGAACAC 61.627 63.158 7.66 0.00 0.00 3.32
216 217 1.621814 CCGAAAGAACACTGGACCCTA 59.378 52.381 0.00 0.00 0.00 3.53
224 225 0.745845 CACTGGACCCTATGCACAGC 60.746 60.000 0.00 0.00 32.60 4.40
225 226 1.200760 ACTGGACCCTATGCACAGCA 61.201 55.000 0.00 0.00 44.86 4.41
226 227 0.745845 CTGGACCCTATGCACAGCAC 60.746 60.000 0.00 0.00 43.04 4.40
227 228 1.299648 GGACCCTATGCACAGCACA 59.700 57.895 0.00 0.00 43.04 4.57
228 229 0.745845 GGACCCTATGCACAGCACAG 60.746 60.000 0.00 0.00 43.04 3.66
230 231 3.506108 CCTATGCACAGCACAGGC 58.494 61.111 3.08 0.00 46.42 4.85
231 232 1.377594 CCTATGCACAGCACAGGCA 60.378 57.895 3.08 0.00 46.42 4.75
232 233 0.961857 CCTATGCACAGCACAGGCAA 60.962 55.000 3.08 0.00 46.42 4.52
236 237 0.886043 TGCACAGCACAGGCAAGTAG 60.886 55.000 0.00 0.00 44.61 2.57
248 249 1.532713 GGCAAGTAGACGTACGCTACC 60.533 57.143 29.44 20.60 39.17 3.18
406 411 1.977009 TTCCTCGCTCCTTCTCGCA 60.977 57.895 0.00 0.00 0.00 5.10
414 419 4.717629 CCTTCTCGCACCGACGCA 62.718 66.667 0.00 0.00 0.00 5.24
591 613 2.280797 CACTCCACCACCACCACG 60.281 66.667 0.00 0.00 0.00 4.94
592 614 3.556306 ACTCCACCACCACCACGG 61.556 66.667 0.00 0.00 42.50 4.94
707 744 1.694696 ACGAATCCTATTGAGCTCCCC 59.305 52.381 12.15 0.00 0.00 4.81
948 994 0.832135 TCTGCCTCCGAGGTGAAAGT 60.832 55.000 16.09 0.00 37.80 2.66
961 1007 3.323979 AGGTGAAAGTAAGAGCGGAAGAA 59.676 43.478 0.00 0.00 0.00 2.52
965 1011 3.320673 AAGTAAGAGCGGAAGAACCTG 57.679 47.619 0.00 0.00 36.31 4.00
1144 1190 1.153901 CACGTCGTGCCGGTAAGAT 60.154 57.895 13.22 0.00 0.00 2.40
1148 1194 0.997196 GTCGTGCCGGTAAGATGAAC 59.003 55.000 11.73 0.00 0.00 3.18
1171 1226 3.391382 CCACCCACCGTCTCCTCC 61.391 72.222 0.00 0.00 0.00 4.30
1172 1227 2.283966 CACCCACCGTCTCCTCCT 60.284 66.667 0.00 0.00 0.00 3.69
1173 1228 2.037527 ACCCACCGTCTCCTCCTC 59.962 66.667 0.00 0.00 0.00 3.71
1174 1229 2.360980 CCCACCGTCTCCTCCTCT 59.639 66.667 0.00 0.00 0.00 3.69
1175 1230 1.755008 CCCACCGTCTCCTCCTCTC 60.755 68.421 0.00 0.00 0.00 3.20
1176 1231 1.304952 CCACCGTCTCCTCCTCTCT 59.695 63.158 0.00 0.00 0.00 3.10
1177 1232 0.547075 CCACCGTCTCCTCCTCTCTA 59.453 60.000 0.00 0.00 0.00 2.43
1178 1233 1.064611 CCACCGTCTCCTCCTCTCTAA 60.065 57.143 0.00 0.00 0.00 2.10
1179 1234 2.294074 CACCGTCTCCTCCTCTCTAAG 58.706 57.143 0.00 0.00 0.00 2.18
1180 1235 1.917568 ACCGTCTCCTCCTCTCTAAGT 59.082 52.381 0.00 0.00 0.00 2.24
1181 1236 2.092807 ACCGTCTCCTCCTCTCTAAGTC 60.093 54.545 0.00 0.00 0.00 3.01
1182 1237 2.171870 CCGTCTCCTCCTCTCTAAGTCT 59.828 54.545 0.00 0.00 0.00 3.24
1183 1238 3.463944 CGTCTCCTCCTCTCTAAGTCTC 58.536 54.545 0.00 0.00 0.00 3.36
1199 1254 2.520982 TCTATCTCCCGCCGGTGG 60.521 66.667 27.92 27.92 0.00 4.61
1218 1273 1.608025 GGCTTGATGGACTGACGAACA 60.608 52.381 0.00 0.00 0.00 3.18
1223 1278 2.271800 GATGGACTGACGAACACATCC 58.728 52.381 0.00 0.00 31.10 3.51
1253 1321 3.808218 TTGTGGGTTGCAGAGGGCC 62.808 63.158 0.00 0.00 43.89 5.80
1334 1402 3.787001 GAGGAGAAGCACCCGGGG 61.787 72.222 27.92 12.73 0.00 5.73
1624 1696 3.379445 AACGTCGATCGCCCCACT 61.379 61.111 11.09 0.00 44.19 4.00
1671 1752 7.557719 ACATCCACATAGTATTTTCTTCCAAGG 59.442 37.037 0.00 0.00 0.00 3.61
1714 1796 3.453424 GAGTGTTTTTGGCCACGAATTT 58.547 40.909 3.88 0.00 36.69 1.82
1826 1909 4.641396 ACAGTTTCAACATGTGCTAGCTA 58.359 39.130 17.23 5.45 0.00 3.32
1827 1910 4.692625 ACAGTTTCAACATGTGCTAGCTAG 59.307 41.667 16.84 16.84 0.00 3.42
1847 1930 1.168714 CTGTGGGCTTTGAACTAGGC 58.831 55.000 0.00 0.00 37.45 3.93
1929 2012 7.278461 TCTCCTGAGTTAATCATACTACTGC 57.722 40.000 0.00 0.00 37.28 4.40
1944 2027 2.222007 ACTGCGATCTCAAGCTGATC 57.778 50.000 3.05 3.05 37.53 2.92
1954 2037 3.323115 TCTCAAGCTGATCGATGCCTTAT 59.677 43.478 0.54 0.00 0.00 1.73
1955 2038 4.063689 CTCAAGCTGATCGATGCCTTATT 58.936 43.478 0.54 0.00 0.00 1.40
1956 2039 5.011023 TCTCAAGCTGATCGATGCCTTATTA 59.989 40.000 0.54 0.00 0.00 0.98
1966 2049 7.967854 TGATCGATGCCTTATTAACAAAAGTTG 59.032 33.333 0.54 0.00 0.00 3.16
2350 2463 3.794270 GCAAACGAGCAGGCGATA 58.206 55.556 0.00 0.00 34.83 2.92
2487 2600 4.408821 GCAGTGACATGGCCCGGA 62.409 66.667 0.73 0.00 0.00 5.14
2488 2601 2.436646 CAGTGACATGGCCCGGAC 60.437 66.667 0.73 0.00 0.00 4.79
2489 2602 2.927856 AGTGACATGGCCCGGACA 60.928 61.111 0.73 0.00 0.00 4.02
2490 2603 2.272146 GTGACATGGCCCGGACAT 59.728 61.111 0.73 0.00 0.00 3.06
2491 2604 0.980754 AGTGACATGGCCCGGACATA 60.981 55.000 5.10 0.00 25.85 2.29
2492 2605 0.814010 GTGACATGGCCCGGACATAC 60.814 60.000 5.10 4.07 25.85 2.39
2493 2606 0.980754 TGACATGGCCCGGACATACT 60.981 55.000 5.10 0.00 25.85 2.12
2495 2608 0.756903 ACATGGCCCGGACATACTAC 59.243 55.000 5.10 0.00 25.85 2.73
2496 2609 0.319555 CATGGCCCGGACATACTACG 60.320 60.000 5.10 0.00 25.85 3.51
2498 2611 0.106769 TGGCCCGGACATACTACGTA 60.107 55.000 0.73 0.00 0.00 3.57
2499 2612 0.595095 GGCCCGGACATACTACGTAG 59.405 60.000 20.97 20.97 0.00 3.51
2500 2613 1.597742 GCCCGGACATACTACGTAGA 58.402 55.000 28.74 12.75 0.00 2.59
2502 2615 2.843701 CCCGGACATACTACGTAGACT 58.156 52.381 28.74 12.19 0.00 3.24
2503 2616 3.803715 GCCCGGACATACTACGTAGACTA 60.804 52.174 28.74 12.16 0.00 2.59
2504 2617 3.993081 CCCGGACATACTACGTAGACTAG 59.007 52.174 28.74 16.31 0.00 2.57
2511 2624 5.762218 ACATACTACGTAGACTAGCCGAATT 59.238 40.000 28.74 4.46 0.00 2.17
2519 2632 1.666189 GACTAGCCGAATTGTTCAGCC 59.334 52.381 0.00 0.00 33.58 4.85
2520 2633 1.279271 ACTAGCCGAATTGTTCAGCCT 59.721 47.619 0.00 0.00 33.58 4.58
2523 2636 1.135315 CCGAATTGTTCAGCCTGCG 59.865 57.895 0.00 0.00 0.00 5.18
2524 2637 1.298157 CCGAATTGTTCAGCCTGCGA 61.298 55.000 0.00 0.00 0.00 5.10
2525 2638 0.095935 CGAATTGTTCAGCCTGCGAG 59.904 55.000 0.00 0.00 0.00 5.03
2526 2639 1.442769 GAATTGTTCAGCCTGCGAGA 58.557 50.000 0.00 0.00 0.00 4.04
2527 2640 1.806542 GAATTGTTCAGCCTGCGAGAA 59.193 47.619 0.00 0.00 0.00 2.87
2566 2694 1.215912 CATGCATTGGCGGCAAGAA 59.784 52.632 28.83 17.00 45.60 2.52
2568 2696 0.108520 ATGCATTGGCGGCAAGAAAG 60.109 50.000 28.83 18.60 45.60 2.62
2610 2738 3.291585 CGCTGCGCTATTCTTTAATTGG 58.708 45.455 9.88 0.00 0.00 3.16
2638 2779 8.156165 AGAGCTTGATAATTAATTAGCTCAGCT 58.844 33.333 32.49 31.42 45.70 4.24
2639 2780 8.321650 AGCTTGATAATTAATTAGCTCAGCTC 57.678 34.615 27.52 15.32 39.52 4.09
2648 2789 3.449528 TTAGCTCAGCTCTAGTGCATG 57.550 47.619 18.36 12.95 40.44 4.06
2664 2806 1.943340 GCATGCTTAGGTTAGTCAGGC 59.057 52.381 11.37 0.00 0.00 4.85
2673 2815 6.318900 GCTTAGGTTAGTCAGGCAAATGTAAT 59.681 38.462 0.00 0.00 0.00 1.89
2674 2816 7.497909 GCTTAGGTTAGTCAGGCAAATGTAATA 59.502 37.037 0.00 0.00 0.00 0.98
2680 2822 4.339247 AGTCAGGCAAATGTAATACCATGC 59.661 41.667 4.32 4.32 0.00 4.06
2686 2828 4.674101 GCAAATGTAATACCATGCGTGTGT 60.674 41.667 4.96 5.30 0.00 3.72
2688 2830 2.623535 TGTAATACCATGCGTGTGTCC 58.376 47.619 4.96 0.00 0.00 4.02
2689 2831 2.235155 TGTAATACCATGCGTGTGTCCT 59.765 45.455 4.96 0.00 0.00 3.85
2690 2832 1.737838 AATACCATGCGTGTGTCCTG 58.262 50.000 4.96 0.00 0.00 3.86
2691 2833 0.613260 ATACCATGCGTGTGTCCTGT 59.387 50.000 4.96 0.00 0.00 4.00
2692 2834 1.258676 TACCATGCGTGTGTCCTGTA 58.741 50.000 4.96 0.00 0.00 2.74
2694 2836 1.202710 ACCATGCGTGTGTCCTGTAAA 60.203 47.619 4.96 0.00 0.00 2.01
2695 2837 2.083774 CCATGCGTGTGTCCTGTAAAT 58.916 47.619 4.96 0.00 0.00 1.40
2696 2838 3.266636 CCATGCGTGTGTCCTGTAAATA 58.733 45.455 4.96 0.00 0.00 1.40
2697 2839 3.063452 CCATGCGTGTGTCCTGTAAATAC 59.937 47.826 4.96 0.00 0.00 1.89
2700 2842 3.495377 TGCGTGTGTCCTGTAAATACAAC 59.505 43.478 0.00 0.00 35.50 3.32
2701 2843 3.744426 GCGTGTGTCCTGTAAATACAACT 59.256 43.478 0.00 0.00 35.50 3.16
2702 2844 4.925054 GCGTGTGTCCTGTAAATACAACTA 59.075 41.667 0.00 0.00 35.50 2.24
2703 2845 5.579511 GCGTGTGTCCTGTAAATACAACTAT 59.420 40.000 0.00 0.00 35.50 2.12
2704 2846 6.091713 GCGTGTGTCCTGTAAATACAACTATT 59.908 38.462 0.00 0.00 35.50 1.73
2705 2847 7.360607 GCGTGTGTCCTGTAAATACAACTATTT 60.361 37.037 0.00 0.00 36.65 1.40
2706 2848 9.142515 CGTGTGTCCTGTAAATACAACTATTTA 57.857 33.333 0.00 0.00 34.83 1.40
2720 2907 3.134458 ACTATTTAGATGGCGAGCAAGC 58.866 45.455 0.00 0.00 0.00 4.01
2722 2909 0.391130 TTTAGATGGCGAGCAAGCGT 60.391 50.000 0.00 0.00 38.18 5.07
2733 2920 1.334869 GAGCAAGCGTATCATTTGGGG 59.665 52.381 0.00 0.00 0.00 4.96
2737 2924 3.283751 CAAGCGTATCATTTGGGGGTAA 58.716 45.455 0.00 0.00 0.00 2.85
2740 2927 3.951680 AGCGTATCATTTGGGGGTAAAAG 59.048 43.478 0.00 0.00 0.00 2.27
2741 2928 3.697542 GCGTATCATTTGGGGGTAAAAGT 59.302 43.478 0.00 0.00 0.00 2.66
2742 2929 4.158949 GCGTATCATTTGGGGGTAAAAGTT 59.841 41.667 0.00 0.00 0.00 2.66
2745 2932 7.577236 GCGTATCATTTGGGGGTAAAAGTTAAA 60.577 37.037 0.00 0.00 0.00 1.52
2747 2934 9.811995 GTATCATTTGGGGGTAAAAGTTAAATC 57.188 33.333 0.00 0.00 0.00 2.17
2749 2936 8.263854 TCATTTGGGGGTAAAAGTTAAATCAA 57.736 30.769 0.00 0.00 0.00 2.57
2751 2938 8.998377 CATTTGGGGGTAAAAGTTAAATCAAAG 58.002 33.333 0.00 0.00 0.00 2.77
2752 2939 6.673839 TGGGGGTAAAAGTTAAATCAAAGG 57.326 37.500 0.00 0.00 0.00 3.11
2753 2940 6.144625 TGGGGGTAAAAGTTAAATCAAAGGT 58.855 36.000 0.00 0.00 0.00 3.50
2754 2941 6.268158 TGGGGGTAAAAGTTAAATCAAAGGTC 59.732 38.462 0.00 0.00 0.00 3.85
2755 2942 6.384224 GGGGTAAAAGTTAAATCAAAGGTCG 58.616 40.000 0.00 0.00 0.00 4.79
2782 2977 4.278669 TGCAAGATAGGCAGTACTAGTAGC 59.721 45.833 1.87 4.17 36.11 3.58
2785 2980 6.442952 CAAGATAGGCAGTACTAGTAGCAAG 58.557 44.000 14.15 2.51 0.00 4.01
2793 2988 6.100004 GCAGTACTAGTAGCAAGATTTCACA 58.900 40.000 1.87 0.00 0.00 3.58
2795 2990 7.316640 CAGTACTAGTAGCAAGATTTCACAGT 58.683 38.462 1.87 0.00 0.00 3.55
2807 3002 7.434897 GCAAGATTTCACAGTTTCATTTGTACA 59.565 33.333 0.00 0.00 0.00 2.90
2813 3008 7.984002 TCACAGTTTCATTTGTACAATGTTG 57.016 32.000 9.56 8.08 0.00 3.33
2814 3009 7.766283 TCACAGTTTCATTTGTACAATGTTGA 58.234 30.769 9.56 10.22 0.00 3.18
2828 3023 4.142182 ACAATGTTGACACTTGGAAGTTGG 60.142 41.667 0.00 0.00 37.08 3.77
2831 3026 3.442273 TGTTGACACTTGGAAGTTGGAAC 59.558 43.478 0.00 0.00 37.08 3.62
2833 3028 3.013921 TGACACTTGGAAGTTGGAACAC 58.986 45.455 0.00 0.00 39.29 3.32
2834 3029 2.014128 ACACTTGGAAGTTGGAACACG 58.986 47.619 0.00 0.00 39.29 4.49
2835 3030 1.333619 CACTTGGAAGTTGGAACACGG 59.666 52.381 0.00 0.00 39.29 4.94
2862 3060 5.349543 GGGTTTGTGTACGTAGTGGAATAAG 59.650 44.000 0.00 0.00 45.73 1.73
2864 3062 4.787260 TGTGTACGTAGTGGAATAAGCA 57.213 40.909 0.00 0.00 45.73 3.91
2867 3065 4.025979 GTGTACGTAGTGGAATAAGCATGC 60.026 45.833 10.51 10.51 45.73 4.06
2872 3070 2.283298 AGTGGAATAAGCATGCGTGAG 58.717 47.619 16.84 0.00 0.00 3.51
2879 3077 6.015772 TGGAATAAGCATGCGTGAGTATACTA 60.016 38.462 16.84 0.00 33.53 1.82
2888 3086 6.122850 TGCGTGAGTATACTAATTACACGT 57.877 37.500 29.36 3.56 46.80 4.49
2922 3120 1.605451 TGTCACGATCGGGAGGTGT 60.605 57.895 22.77 0.00 33.51 4.16
2923 3121 1.139095 GTCACGATCGGGAGGTGTC 59.861 63.158 22.77 4.50 33.51 3.67
2924 3122 2.102357 CACGATCGGGAGGTGTCG 59.898 66.667 20.98 0.00 39.78 4.35
2925 3123 2.045634 ACGATCGGGAGGTGTCGA 60.046 61.111 20.98 0.00 39.79 4.20
2970 3168 4.581105 TTGCGGGTTTGGCAACTA 57.419 50.000 0.00 0.00 44.79 2.24
2971 3169 2.034607 TTGCGGGTTTGGCAACTAC 58.965 52.632 0.00 0.00 44.79 2.73
2972 3170 0.752009 TTGCGGGTTTGGCAACTACA 60.752 50.000 0.00 0.00 44.79 2.74
2977 3175 2.549349 CGGGTTTGGCAACTACAGTACT 60.549 50.000 0.00 0.00 32.90 2.73
2990 3188 5.881447 ACTACAGTACTGTATTTCTCTGCG 58.119 41.667 30.78 19.62 44.15 5.18
2992 3190 2.531912 CAGTACTGTATTTCTCTGCGCG 59.468 50.000 15.06 0.00 0.00 6.86
2994 3192 0.246635 ACTGTATTTCTCTGCGCGGT 59.753 50.000 17.37 0.00 0.00 5.68
2995 3193 0.647410 CTGTATTTCTCTGCGCGGTG 59.353 55.000 17.37 14.57 0.00 4.94
2996 3194 1.348594 GTATTTCTCTGCGCGGTGC 59.651 57.895 17.37 6.58 46.70 5.01
3009 3207 4.008933 GGTGCGTGCTCTGGAGGT 62.009 66.667 0.00 0.00 0.00 3.85
3010 3208 2.740055 GTGCGTGCTCTGGAGGTG 60.740 66.667 0.00 0.00 0.00 4.00
3011 3209 2.917227 TGCGTGCTCTGGAGGTGA 60.917 61.111 0.00 0.00 0.00 4.02
3012 3210 2.343758 GCGTGCTCTGGAGGTGAA 59.656 61.111 0.00 0.00 0.00 3.18
3013 3211 1.301716 GCGTGCTCTGGAGGTGAAA 60.302 57.895 0.00 0.00 0.00 2.69
3014 3212 1.294659 GCGTGCTCTGGAGGTGAAAG 61.295 60.000 0.00 0.00 0.00 2.62
3015 3213 1.294659 CGTGCTCTGGAGGTGAAAGC 61.295 60.000 0.00 0.00 0.00 3.51
3016 3214 1.004560 TGCTCTGGAGGTGAAAGCG 60.005 57.895 0.00 0.00 40.95 4.68
3017 3215 1.004440 GCTCTGGAGGTGAAAGCGT 60.004 57.895 0.00 0.00 40.95 5.07
3018 3216 1.294659 GCTCTGGAGGTGAAAGCGTG 61.295 60.000 0.00 0.00 40.95 5.34
3019 3217 0.034059 CTCTGGAGGTGAAAGCGTGT 59.966 55.000 0.00 0.00 40.95 4.49
3020 3218 0.249868 TCTGGAGGTGAAAGCGTGTG 60.250 55.000 0.00 0.00 40.95 3.82
3027 3225 0.446222 GTGAAAGCGTGTGTGTGTGT 59.554 50.000 0.00 0.00 0.00 3.72
3097 3296 0.038526 TCGGGAACTTTCTCACGAGC 60.039 55.000 0.00 0.00 0.00 5.03
3134 3333 2.094182 GCCGATTCAGAGTCACTTGGTA 60.094 50.000 0.00 0.00 0.00 3.25
3154 3355 5.247337 TGGTAAAGTGACAGTGTATGGATGA 59.753 40.000 0.00 0.00 0.00 2.92
3186 3387 2.884639 CGTTGAGGTGGAAGGTGATTTT 59.115 45.455 0.00 0.00 0.00 1.82
3197 3398 7.386059 GTGGAAGGTGATTTTGGTTTGATTAT 58.614 34.615 0.00 0.00 0.00 1.28
3199 3400 9.094578 TGGAAGGTGATTTTGGTTTGATTATTA 57.905 29.630 0.00 0.00 0.00 0.98
3200 3401 9.586435 GGAAGGTGATTTTGGTTTGATTATTAG 57.414 33.333 0.00 0.00 0.00 1.73
3201 3402 9.087424 GAAGGTGATTTTGGTTTGATTATTAGC 57.913 33.333 0.00 0.00 0.00 3.09
3202 3403 8.133024 AGGTGATTTTGGTTTGATTATTAGCA 57.867 30.769 0.00 0.00 0.00 3.49
3203 3404 8.253113 AGGTGATTTTGGTTTGATTATTAGCAG 58.747 33.333 0.00 0.00 0.00 4.24
3204 3405 8.034804 GGTGATTTTGGTTTGATTATTAGCAGT 58.965 33.333 0.00 0.00 0.00 4.40
3251 3452 1.152963 AACTTTGTCTGCACCCGCT 60.153 52.632 0.00 0.00 39.64 5.52
3351 3552 0.788391 CAAGTTTACTGTCCGCGTCC 59.212 55.000 4.92 0.00 0.00 4.79
3374 3575 1.083489 GTGACGGGCGAATCATTTGA 58.917 50.000 0.00 0.00 0.00 2.69
3375 3576 1.062587 GTGACGGGCGAATCATTTGAG 59.937 52.381 0.00 0.00 0.00 3.02
3376 3577 1.066502 TGACGGGCGAATCATTTGAGA 60.067 47.619 0.00 0.00 0.00 3.27
3377 3578 2.006888 GACGGGCGAATCATTTGAGAA 58.993 47.619 0.00 0.00 0.00 2.87
3378 3579 2.418628 GACGGGCGAATCATTTGAGAAA 59.581 45.455 0.00 0.00 0.00 2.52
3379 3580 2.817258 ACGGGCGAATCATTTGAGAAAA 59.183 40.909 0.00 0.00 0.00 2.29
3380 3581 3.254657 ACGGGCGAATCATTTGAGAAAAA 59.745 39.130 0.00 0.00 0.00 1.94
3381 3582 3.853671 CGGGCGAATCATTTGAGAAAAAG 59.146 43.478 0.00 0.00 0.00 2.27
3382 3583 4.176271 GGGCGAATCATTTGAGAAAAAGG 58.824 43.478 0.00 0.00 0.00 3.11
3383 3584 4.176271 GGCGAATCATTTGAGAAAAAGGG 58.824 43.478 0.00 0.00 0.00 3.95
3384 3585 4.321974 GGCGAATCATTTGAGAAAAAGGGT 60.322 41.667 0.00 0.00 0.00 4.34
3385 3586 5.230182 GCGAATCATTTGAGAAAAAGGGTT 58.770 37.500 0.00 0.00 0.00 4.11
3386 3587 5.696270 GCGAATCATTTGAGAAAAAGGGTTT 59.304 36.000 0.00 0.00 0.00 3.27
3387 3588 6.128822 GCGAATCATTTGAGAAAAAGGGTTTC 60.129 38.462 0.00 0.00 0.00 2.78
3388 3589 6.366061 CGAATCATTTGAGAAAAAGGGTTTCC 59.634 38.462 0.00 0.00 0.00 3.13
3389 3590 5.545063 TCATTTGAGAAAAAGGGTTTCCC 57.455 39.130 0.00 0.00 45.90 3.97
3398 3599 4.826248 GGGTTTCCCCGCTTTGTA 57.174 55.556 0.00 0.00 42.41 2.41
3399 3600 3.276281 GGGTTTCCCCGCTTTGTAT 57.724 52.632 0.00 0.00 42.41 2.29
3400 3601 1.552578 GGGTTTCCCCGCTTTGTATT 58.447 50.000 0.00 0.00 42.41 1.89
3401 3602 2.725637 GGGTTTCCCCGCTTTGTATTA 58.274 47.619 0.00 0.00 42.41 0.98
3402 3603 2.424601 GGGTTTCCCCGCTTTGTATTAC 59.575 50.000 0.00 0.00 42.41 1.89
3403 3604 3.083293 GGTTTCCCCGCTTTGTATTACA 58.917 45.455 0.00 0.00 0.00 2.41
3404 3605 3.506844 GGTTTCCCCGCTTTGTATTACAA 59.493 43.478 5.14 5.14 36.11 2.41
3405 3606 4.022155 GGTTTCCCCGCTTTGTATTACAAA 60.022 41.667 18.39 18.39 44.91 2.83
3416 3617 4.491234 TGTATTACAAAGCAACCAACCG 57.509 40.909 0.00 0.00 0.00 4.44
3417 3618 4.135306 TGTATTACAAAGCAACCAACCGA 58.865 39.130 0.00 0.00 0.00 4.69
3418 3619 4.762765 TGTATTACAAAGCAACCAACCGAT 59.237 37.500 0.00 0.00 0.00 4.18
3419 3620 5.938710 TGTATTACAAAGCAACCAACCGATA 59.061 36.000 0.00 0.00 0.00 2.92
3420 3621 6.600032 TGTATTACAAAGCAACCAACCGATAT 59.400 34.615 0.00 0.00 0.00 1.63
3421 3622 7.769507 TGTATTACAAAGCAACCAACCGATATA 59.230 33.333 0.00 0.00 0.00 0.86
3422 3623 7.633193 ATTACAAAGCAACCAACCGATATAA 57.367 32.000 0.00 0.00 0.00 0.98
3423 3624 5.305139 ACAAAGCAACCAACCGATATAAC 57.695 39.130 0.00 0.00 0.00 1.89
3424 3625 4.157105 ACAAAGCAACCAACCGATATAACC 59.843 41.667 0.00 0.00 0.00 2.85
3425 3626 2.557317 AGCAACCAACCGATATAACCG 58.443 47.619 0.00 0.00 0.00 4.44
3426 3627 2.168936 AGCAACCAACCGATATAACCGA 59.831 45.455 0.00 0.00 0.00 4.69
3427 3628 2.286025 GCAACCAACCGATATAACCGAC 59.714 50.000 0.19 0.00 0.00 4.79
3428 3629 2.497107 ACCAACCGATATAACCGACG 57.503 50.000 0.00 0.00 0.00 5.12
3429 3630 2.023673 ACCAACCGATATAACCGACGA 58.976 47.619 0.00 0.00 0.00 4.20
3430 3631 2.624838 ACCAACCGATATAACCGACGAT 59.375 45.455 0.00 0.00 0.00 3.73
3431 3632 3.820467 ACCAACCGATATAACCGACGATA 59.180 43.478 0.00 0.00 0.00 2.92
3432 3633 4.083110 ACCAACCGATATAACCGACGATAG 60.083 45.833 0.00 0.00 46.19 2.08
3433 3634 4.409570 CAACCGATATAACCGACGATAGG 58.590 47.826 0.00 0.00 43.77 2.57
3434 3635 3.012518 ACCGATATAACCGACGATAGGG 58.987 50.000 0.00 0.00 43.77 3.53
3435 3636 3.012518 CCGATATAACCGACGATAGGGT 58.987 50.000 0.00 0.00 43.77 4.34
3436 3637 3.064545 CCGATATAACCGACGATAGGGTC 59.935 52.174 0.00 0.00 43.77 4.46
3437 3638 3.937706 CGATATAACCGACGATAGGGTCT 59.062 47.826 0.00 0.00 43.77 3.85
3438 3639 4.201792 CGATATAACCGACGATAGGGTCTG 60.202 50.000 0.00 0.00 43.77 3.51
3439 3640 1.683943 TAACCGACGATAGGGTCTGG 58.316 55.000 0.00 0.00 43.77 3.86
3440 3641 1.041447 AACCGACGATAGGGTCTGGG 61.041 60.000 0.00 0.00 43.77 4.45
3441 3642 2.201022 CCGACGATAGGGTCTGGGG 61.201 68.421 0.00 0.00 43.77 4.96
3442 3643 2.857744 CGACGATAGGGTCTGGGGC 61.858 68.421 0.00 0.00 43.77 5.80
3443 3644 2.838225 ACGATAGGGTCTGGGGCG 60.838 66.667 0.00 0.00 43.77 6.13
3444 3645 2.520982 CGATAGGGTCTGGGGCGA 60.521 66.667 0.00 0.00 0.00 5.54
3445 3646 2.131709 CGATAGGGTCTGGGGCGAA 61.132 63.158 0.00 0.00 0.00 4.70
3446 3647 1.682451 CGATAGGGTCTGGGGCGAAA 61.682 60.000 0.00 0.00 0.00 3.46
3447 3648 0.106894 GATAGGGTCTGGGGCGAAAG 59.893 60.000 0.00 0.00 0.00 2.62
3460 3661 2.483793 CGAAAGCAGCACAAACACG 58.516 52.632 0.00 0.00 0.00 4.49
3461 3662 1.531522 CGAAAGCAGCACAAACACGC 61.532 55.000 0.00 0.00 0.00 5.34
3462 3663 1.208642 GAAAGCAGCACAAACACGCC 61.209 55.000 0.00 0.00 0.00 5.68
3463 3664 2.627510 AAAGCAGCACAAACACGCCC 62.628 55.000 0.00 0.00 0.00 6.13
3464 3665 3.898509 GCAGCACAAACACGCCCA 61.899 61.111 0.00 0.00 0.00 5.36
3465 3666 2.804167 CAGCACAAACACGCCCAA 59.196 55.556 0.00 0.00 0.00 4.12
3466 3667 1.140589 CAGCACAAACACGCCCAAA 59.859 52.632 0.00 0.00 0.00 3.28
3467 3668 0.459237 CAGCACAAACACGCCCAAAA 60.459 50.000 0.00 0.00 0.00 2.44
3468 3669 0.179113 AGCACAAACACGCCCAAAAG 60.179 50.000 0.00 0.00 0.00 2.27
3469 3670 0.179124 GCACAAACACGCCCAAAAGA 60.179 50.000 0.00 0.00 0.00 2.52
3470 3671 1.737363 GCACAAACACGCCCAAAAGAA 60.737 47.619 0.00 0.00 0.00 2.52
3471 3672 2.611518 CACAAACACGCCCAAAAGAAA 58.388 42.857 0.00 0.00 0.00 2.52
3472 3673 2.602660 CACAAACACGCCCAAAAGAAAG 59.397 45.455 0.00 0.00 0.00 2.62
3473 3674 2.200899 CAAACACGCCCAAAAGAAAGG 58.799 47.619 0.00 0.00 0.00 3.11
3474 3675 1.770294 AACACGCCCAAAAGAAAGGA 58.230 45.000 0.00 0.00 0.00 3.36
3475 3676 1.770294 ACACGCCCAAAAGAAAGGAA 58.230 45.000 0.00 0.00 0.00 3.36
3476 3677 2.104170 ACACGCCCAAAAGAAAGGAAA 58.896 42.857 0.00 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.814336 GTCTAGGTTGCCTCAGTTTTGG 59.186 50.000 0.00 0.00 34.61 3.28
3 4 2.480419 CGTCTAGGTTGCCTCAGTTTTG 59.520 50.000 0.00 0.00 34.61 2.44
4 5 2.367567 TCGTCTAGGTTGCCTCAGTTTT 59.632 45.455 0.00 0.00 34.61 2.43
5 6 1.968493 TCGTCTAGGTTGCCTCAGTTT 59.032 47.619 0.00 0.00 34.61 2.66
6 7 1.546476 CTCGTCTAGGTTGCCTCAGTT 59.454 52.381 0.00 0.00 34.61 3.16
7 8 1.178276 CTCGTCTAGGTTGCCTCAGT 58.822 55.000 0.00 0.00 34.61 3.41
8 9 0.179124 GCTCGTCTAGGTTGCCTCAG 60.179 60.000 0.00 0.00 34.61 3.35
9 10 0.898326 TGCTCGTCTAGGTTGCCTCA 60.898 55.000 0.00 0.00 34.61 3.86
10 11 0.458716 GTGCTCGTCTAGGTTGCCTC 60.459 60.000 0.00 0.00 34.61 4.70
11 12 1.185618 TGTGCTCGTCTAGGTTGCCT 61.186 55.000 0.00 0.00 37.71 4.75
12 13 0.320421 TTGTGCTCGTCTAGGTTGCC 60.320 55.000 0.00 0.00 0.00 4.52
13 14 1.726853 ATTGTGCTCGTCTAGGTTGC 58.273 50.000 0.00 0.00 0.00 4.17
14 15 5.856126 TTTTATTGTGCTCGTCTAGGTTG 57.144 39.130 0.00 0.00 0.00 3.77
15 16 6.537660 GGTATTTTATTGTGCTCGTCTAGGTT 59.462 38.462 0.00 0.00 0.00 3.50
16 17 6.047231 GGTATTTTATTGTGCTCGTCTAGGT 58.953 40.000 0.00 0.00 0.00 3.08
17 18 6.018994 GTGGTATTTTATTGTGCTCGTCTAGG 60.019 42.308 0.00 0.00 0.00 3.02
18 19 6.757010 AGTGGTATTTTATTGTGCTCGTCTAG 59.243 38.462 0.00 0.00 0.00 2.43
19 20 6.636705 AGTGGTATTTTATTGTGCTCGTCTA 58.363 36.000 0.00 0.00 0.00 2.59
20 21 5.488341 AGTGGTATTTTATTGTGCTCGTCT 58.512 37.500 0.00 0.00 0.00 4.18
21 22 5.796350 AGTGGTATTTTATTGTGCTCGTC 57.204 39.130 0.00 0.00 0.00 4.20
22 23 6.016610 ACAAAGTGGTATTTTATTGTGCTCGT 60.017 34.615 0.00 0.00 30.46 4.18
23 24 6.378582 ACAAAGTGGTATTTTATTGTGCTCG 58.621 36.000 0.00 0.00 30.46 5.03
24 25 6.806739 GGACAAAGTGGTATTTTATTGTGCTC 59.193 38.462 0.00 0.00 36.56 4.26
25 26 6.295067 GGGACAAAGTGGTATTTTATTGTGCT 60.295 38.462 7.66 0.00 38.59 4.40
26 27 5.867174 GGGACAAAGTGGTATTTTATTGTGC 59.133 40.000 0.00 0.00 38.07 4.57
27 28 6.090129 CGGGACAAAGTGGTATTTTATTGTG 58.910 40.000 0.00 0.00 31.68 3.33
28 29 5.771165 ACGGGACAAAGTGGTATTTTATTGT 59.229 36.000 0.00 0.00 34.01 2.71
29 30 6.262193 ACGGGACAAAGTGGTATTTTATTG 57.738 37.500 0.00 0.00 0.00 1.90
30 31 9.683870 TTATACGGGACAAAGTGGTATTTTATT 57.316 29.630 0.00 0.00 0.00 1.40
31 32 9.112725 GTTATACGGGACAAAGTGGTATTTTAT 57.887 33.333 0.00 0.00 0.00 1.40
32 33 7.552330 GGTTATACGGGACAAAGTGGTATTTTA 59.448 37.037 0.00 0.00 0.00 1.52
33 34 6.375174 GGTTATACGGGACAAAGTGGTATTTT 59.625 38.462 0.00 0.00 0.00 1.82
34 35 5.882000 GGTTATACGGGACAAAGTGGTATTT 59.118 40.000 0.00 0.00 0.00 1.40
35 36 5.190330 AGGTTATACGGGACAAAGTGGTATT 59.810 40.000 0.00 0.00 0.00 1.89
36 37 4.718276 AGGTTATACGGGACAAAGTGGTAT 59.282 41.667 0.00 0.00 0.00 2.73
37 38 4.095946 AGGTTATACGGGACAAAGTGGTA 58.904 43.478 0.00 0.00 0.00 3.25
38 39 2.908351 AGGTTATACGGGACAAAGTGGT 59.092 45.455 0.00 0.00 0.00 4.16
39 40 3.622166 AGGTTATACGGGACAAAGTGG 57.378 47.619 0.00 0.00 0.00 4.00
40 41 5.809051 GTCTTAGGTTATACGGGACAAAGTG 59.191 44.000 0.00 0.00 0.00 3.16
41 42 5.393461 CGTCTTAGGTTATACGGGACAAAGT 60.393 44.000 0.00 0.00 0.00 2.66
42 43 5.039333 CGTCTTAGGTTATACGGGACAAAG 58.961 45.833 0.00 0.00 0.00 2.77
43 44 4.462483 ACGTCTTAGGTTATACGGGACAAA 59.538 41.667 0.00 0.00 39.57 2.83
44 45 4.016444 ACGTCTTAGGTTATACGGGACAA 58.984 43.478 0.00 0.00 39.57 3.18
45 46 3.620488 ACGTCTTAGGTTATACGGGACA 58.380 45.455 0.00 0.00 39.57 4.02
46 47 4.639135 AACGTCTTAGGTTATACGGGAC 57.361 45.455 0.00 0.00 39.57 4.46
47 48 5.659440 AAAACGTCTTAGGTTATACGGGA 57.341 39.130 0.00 0.00 39.57 5.14
48 49 5.446340 GCAAAAACGTCTTAGGTTATACGGG 60.446 44.000 0.00 0.00 39.57 5.28
49 50 5.120519 TGCAAAAACGTCTTAGGTTATACGG 59.879 40.000 0.00 0.00 39.57 4.02
50 51 6.128742 ACTGCAAAAACGTCTTAGGTTATACG 60.129 38.462 0.00 0.00 40.99 3.06
51 52 7.117379 AGACTGCAAAAACGTCTTAGGTTATAC 59.883 37.037 0.00 0.00 34.55 1.47
52 53 7.156673 AGACTGCAAAAACGTCTTAGGTTATA 58.843 34.615 0.00 0.00 34.55 0.98
53 54 5.995897 AGACTGCAAAAACGTCTTAGGTTAT 59.004 36.000 0.00 0.00 34.55 1.89
54 55 5.362263 AGACTGCAAAAACGTCTTAGGTTA 58.638 37.500 0.00 0.00 34.55 2.85
55 56 4.196971 AGACTGCAAAAACGTCTTAGGTT 58.803 39.130 0.00 0.00 34.55 3.50
56 57 3.805207 AGACTGCAAAAACGTCTTAGGT 58.195 40.909 0.00 0.00 34.55 3.08
57 58 4.813296 AAGACTGCAAAAACGTCTTAGG 57.187 40.909 14.63 0.00 43.85 2.69
63 64 9.826574 TCCTATAATATAAGACTGCAAAAACGT 57.173 29.630 0.00 0.00 0.00 3.99
66 67 9.268268 CCGTCCTATAATATAAGACTGCAAAAA 57.732 33.333 7.26 0.00 0.00 1.94
67 68 7.876068 CCCGTCCTATAATATAAGACTGCAAAA 59.124 37.037 7.26 0.00 0.00 2.44
68 69 7.233962 TCCCGTCCTATAATATAAGACTGCAAA 59.766 37.037 7.26 0.00 0.00 3.68
69 70 6.722590 TCCCGTCCTATAATATAAGACTGCAA 59.277 38.462 7.26 0.00 0.00 4.08
70 71 6.250711 TCCCGTCCTATAATATAAGACTGCA 58.749 40.000 7.26 0.00 0.00 4.41
71 72 6.183360 CCTCCCGTCCTATAATATAAGACTGC 60.183 46.154 7.26 0.00 0.00 4.40
72 73 7.117397 TCCTCCCGTCCTATAATATAAGACTG 58.883 42.308 7.26 1.86 0.00 3.51
73 74 7.036717 ACTCCTCCCGTCCTATAATATAAGACT 60.037 40.741 7.26 0.00 0.00 3.24
74 75 7.118060 ACTCCTCCCGTCCTATAATATAAGAC 58.882 42.308 0.12 0.12 0.00 3.01
75 76 7.281366 ACTCCTCCCGTCCTATAATATAAGA 57.719 40.000 0.00 0.00 0.00 2.10
76 77 9.643735 AATACTCCTCCCGTCCTATAATATAAG 57.356 37.037 0.00 0.00 0.00 1.73
79 80 8.912614 AAAATACTCCTCCCGTCCTATAATAT 57.087 34.615 0.00 0.00 0.00 1.28
80 81 8.731591 AAAAATACTCCTCCCGTCCTATAATA 57.268 34.615 0.00 0.00 0.00 0.98
81 82 7.628501 AAAAATACTCCTCCCGTCCTATAAT 57.371 36.000 0.00 0.00 0.00 1.28
127 128 9.769093 GTGCTCGTCATATTTTACATTTTTACT 57.231 29.630 0.00 0.00 0.00 2.24
128 129 9.549509 TGTGCTCGTCATATTTTACATTTTTAC 57.450 29.630 0.00 0.00 0.00 2.01
129 130 9.767684 CTGTGCTCGTCATATTTTACATTTTTA 57.232 29.630 0.00 0.00 0.00 1.52
130 131 8.296713 ACTGTGCTCGTCATATTTTACATTTTT 58.703 29.630 0.00 0.00 0.00 1.94
131 132 7.816640 ACTGTGCTCGTCATATTTTACATTTT 58.183 30.769 0.00 0.00 0.00 1.82
132 133 7.377766 ACTGTGCTCGTCATATTTTACATTT 57.622 32.000 0.00 0.00 0.00 2.32
133 134 6.985188 ACTGTGCTCGTCATATTTTACATT 57.015 33.333 0.00 0.00 0.00 2.71
134 135 6.593770 TCAACTGTGCTCGTCATATTTTACAT 59.406 34.615 0.00 0.00 0.00 2.29
135 136 5.929415 TCAACTGTGCTCGTCATATTTTACA 59.071 36.000 0.00 0.00 0.00 2.41
136 137 6.403333 TCAACTGTGCTCGTCATATTTTAC 57.597 37.500 0.00 0.00 0.00 2.01
137 138 5.063438 GCTCAACTGTGCTCGTCATATTTTA 59.937 40.000 0.00 0.00 0.00 1.52
138 139 4.142816 GCTCAACTGTGCTCGTCATATTTT 60.143 41.667 0.00 0.00 0.00 1.82
139 140 3.372206 GCTCAACTGTGCTCGTCATATTT 59.628 43.478 0.00 0.00 0.00 1.40
140 141 2.932614 GCTCAACTGTGCTCGTCATATT 59.067 45.455 0.00 0.00 0.00 1.28
141 142 2.094026 TGCTCAACTGTGCTCGTCATAT 60.094 45.455 5.46 0.00 35.73 1.78
142 143 1.272212 TGCTCAACTGTGCTCGTCATA 59.728 47.619 5.46 0.00 35.73 2.15
143 144 0.033920 TGCTCAACTGTGCTCGTCAT 59.966 50.000 5.46 0.00 35.73 3.06
144 145 0.033920 ATGCTCAACTGTGCTCGTCA 59.966 50.000 5.46 0.00 35.73 4.35
145 146 1.996292 TATGCTCAACTGTGCTCGTC 58.004 50.000 5.46 0.00 35.73 4.20
146 147 2.680312 ATATGCTCAACTGTGCTCGT 57.320 45.000 5.46 0.00 35.73 4.18
147 148 4.093514 CAAAATATGCTCAACTGTGCTCG 58.906 43.478 5.46 0.00 35.73 5.03
148 149 4.082571 ACCAAAATATGCTCAACTGTGCTC 60.083 41.667 5.46 0.00 35.73 4.26
149 150 3.828451 ACCAAAATATGCTCAACTGTGCT 59.172 39.130 5.46 0.00 35.73 4.40
150 151 3.922240 CACCAAAATATGCTCAACTGTGC 59.078 43.478 0.00 0.00 35.32 4.57
151 152 4.487948 CCACCAAAATATGCTCAACTGTG 58.512 43.478 0.00 0.00 0.00 3.66
152 153 3.511146 CCCACCAAAATATGCTCAACTGT 59.489 43.478 0.00 0.00 0.00 3.55
153 154 3.763360 TCCCACCAAAATATGCTCAACTG 59.237 43.478 0.00 0.00 0.00 3.16
154 155 4.046286 TCCCACCAAAATATGCTCAACT 57.954 40.909 0.00 0.00 0.00 3.16
155 156 4.799564 TTCCCACCAAAATATGCTCAAC 57.200 40.909 0.00 0.00 0.00 3.18
156 157 5.815233 TTTTCCCACCAAAATATGCTCAA 57.185 34.783 0.00 0.00 0.00 3.02
157 158 5.815233 TTTTTCCCACCAAAATATGCTCA 57.185 34.783 0.00 0.00 0.00 4.26
176 177 0.681175 GGCAGCCTGACACCATTTTT 59.319 50.000 3.29 0.00 0.00 1.94
177 178 1.187567 GGGCAGCCTGACACCATTTT 61.188 55.000 12.43 0.00 0.00 1.82
178 179 1.607467 GGGCAGCCTGACACCATTT 60.607 57.895 12.43 0.00 0.00 2.32
179 180 2.036256 GGGCAGCCTGACACCATT 59.964 61.111 12.43 0.00 0.00 3.16
180 181 4.052518 GGGGCAGCCTGACACCAT 62.053 66.667 12.43 0.00 0.00 3.55
183 184 3.842925 TTTCGGGGCAGCCTGACAC 62.843 63.158 12.43 0.00 0.00 3.67
184 185 3.551496 CTTTCGGGGCAGCCTGACA 62.551 63.158 12.43 2.16 0.00 3.58
185 186 2.747855 CTTTCGGGGCAGCCTGAC 60.748 66.667 12.43 0.00 0.00 3.51
186 187 2.525124 TTCTTTCGGGGCAGCCTGA 61.525 57.895 12.43 7.14 0.00 3.86
187 188 2.034066 TTCTTTCGGGGCAGCCTG 59.966 61.111 12.43 4.48 0.00 4.85
194 195 0.605589 GGTCCAGTGTTCTTTCGGGG 60.606 60.000 0.00 0.00 0.00 5.73
205 206 0.745845 GCTGTGCATAGGGTCCAGTG 60.746 60.000 12.79 0.00 0.00 3.66
207 208 0.745845 GTGCTGTGCATAGGGTCCAG 60.746 60.000 12.79 3.23 41.91 3.86
216 217 0.250858 TACTTGCCTGTGCTGTGCAT 60.251 50.000 0.00 0.00 41.91 3.96
224 225 1.614385 CGTACGTCTACTTGCCTGTG 58.386 55.000 7.22 0.00 0.00 3.66
225 226 0.109412 GCGTACGTCTACTTGCCTGT 60.109 55.000 17.90 0.00 0.00 4.00
226 227 0.170561 AGCGTACGTCTACTTGCCTG 59.829 55.000 17.90 0.00 0.00 4.85
227 228 1.399791 GTAGCGTACGTCTACTTGCCT 59.600 52.381 27.59 13.99 34.93 4.75
228 229 1.532713 GGTAGCGTACGTCTACTTGCC 60.533 57.143 30.51 19.79 37.25 4.52
229 230 1.131126 TGGTAGCGTACGTCTACTTGC 59.869 52.381 30.51 21.67 37.25 4.01
230 231 2.160219 TGTGGTAGCGTACGTCTACTTG 59.840 50.000 30.51 3.56 37.25 3.16
231 232 2.426522 TGTGGTAGCGTACGTCTACTT 58.573 47.619 30.51 12.06 37.25 2.24
232 233 2.099141 TGTGGTAGCGTACGTCTACT 57.901 50.000 30.51 18.68 37.25 2.57
236 237 2.104144 CGTATTGTGGTAGCGTACGTC 58.896 52.381 17.90 9.31 34.93 4.34
248 249 1.274596 GCGTGTACTCCCGTATTGTG 58.725 55.000 0.00 0.00 0.00 3.33
265 266 2.100631 GTCCCACTTGTCATCCGCG 61.101 63.158 0.00 0.00 0.00 6.46
372 377 0.250513 GGAACGCTTGGATGTCTCCT 59.749 55.000 0.00 0.00 42.59 3.69
373 378 0.250513 AGGAACGCTTGGATGTCTCC 59.749 55.000 0.00 0.00 42.45 3.71
406 411 2.684192 TTTGGGATTGGTGCGTCGGT 62.684 55.000 0.00 0.00 0.00 4.69
414 419 0.701731 TCCGGTGATTTGGGATTGGT 59.298 50.000 0.00 0.00 0.00 3.67
565 587 4.083862 GGTGGAGTGAGGGGTCGC 62.084 72.222 0.00 0.00 0.00 5.19
591 613 2.936032 AAGGAGGAGGGTGGTGCC 60.936 66.667 0.00 0.00 0.00 5.01
592 614 2.671682 GAAGGAGGAGGGTGGTGC 59.328 66.667 0.00 0.00 0.00 5.01
707 744 2.670934 GCACAGGCACAGACAGGG 60.671 66.667 0.00 0.00 40.72 4.45
836 873 0.108520 TCGCCGGCTAGTTAACCAAG 60.109 55.000 26.68 3.78 0.00 3.61
948 994 2.231478 CAGTCAGGTTCTTCCGCTCTTA 59.769 50.000 0.00 0.00 41.99 2.10
965 1011 0.032416 TAGCTCCCCTGGTACCAGTC 60.032 60.000 34.49 19.72 42.15 3.51
1090 1136 3.307906 CACGACCACCTTCCCGGA 61.308 66.667 0.73 0.00 36.31 5.14
1144 1190 1.458486 GGTGGGTGGATGTGGTTCA 59.542 57.895 0.00 0.00 0.00 3.18
1148 1194 2.046314 GACGGTGGGTGGATGTGG 60.046 66.667 0.00 0.00 0.00 4.17
1159 1205 2.294074 CTTAGAGAGGAGGAGACGGTG 58.706 57.143 0.00 0.00 0.00 4.94
1171 1226 4.000988 GCGGGAGATAGAGACTTAGAGAG 58.999 52.174 0.00 0.00 0.00 3.20
1172 1227 3.244630 GGCGGGAGATAGAGACTTAGAGA 60.245 52.174 0.00 0.00 0.00 3.10
1173 1228 3.078837 GGCGGGAGATAGAGACTTAGAG 58.921 54.545 0.00 0.00 0.00 2.43
1174 1229 2.550423 CGGCGGGAGATAGAGACTTAGA 60.550 54.545 0.00 0.00 0.00 2.10
1175 1230 1.807742 CGGCGGGAGATAGAGACTTAG 59.192 57.143 0.00 0.00 0.00 2.18
1176 1231 1.544982 CCGGCGGGAGATAGAGACTTA 60.545 57.143 20.56 0.00 34.06 2.24
1177 1232 0.824182 CCGGCGGGAGATAGAGACTT 60.824 60.000 20.56 0.00 34.06 3.01
1178 1233 1.228306 CCGGCGGGAGATAGAGACT 60.228 63.158 20.56 0.00 34.06 3.24
1179 1234 1.528776 ACCGGCGGGAGATAGAGAC 60.529 63.158 31.78 0.00 36.97 3.36
1180 1235 1.528542 CACCGGCGGGAGATAGAGA 60.529 63.158 31.78 0.00 36.97 3.10
1181 1236 2.565645 CCACCGGCGGGAGATAGAG 61.566 68.421 31.78 8.71 36.97 2.43
1182 1237 2.520982 CCACCGGCGGGAGATAGA 60.521 66.667 31.78 0.00 36.97 1.98
1183 1238 4.301027 GCCACCGGCGGGAGATAG 62.301 72.222 31.78 12.46 39.62 2.08
1199 1254 1.461127 GTGTTCGTCAGTCCATCAAGC 59.539 52.381 0.00 0.00 0.00 4.01
1218 1273 2.485426 CACAAAACAGAGCATCGGATGT 59.515 45.455 18.54 6.35 42.67 3.06
1223 1278 1.238439 ACCCACAAAACAGAGCATCG 58.762 50.000 0.00 0.00 42.67 3.84
1334 1402 3.081409 TAGGTCCGGGGCAGCTTC 61.081 66.667 0.00 0.00 0.00 3.86
1671 1752 1.079503 AGAGCGAAGAAATTCGTGGC 58.920 50.000 7.70 7.70 45.45 5.01
1696 1778 3.526931 TCAAATTCGTGGCCAAAAACA 57.473 38.095 7.24 0.00 0.00 2.83
1714 1796 2.527497 TGCTGAAGAAATTGGCCATCA 58.473 42.857 6.09 5.08 0.00 3.07
1827 1910 1.168714 CCTAGTTCAAAGCCCACAGC 58.831 55.000 0.00 0.00 44.25 4.40
1828 1911 1.168714 GCCTAGTTCAAAGCCCACAG 58.831 55.000 0.00 0.00 0.00 3.66
1829 1912 0.251165 GGCCTAGTTCAAAGCCCACA 60.251 55.000 0.00 0.00 39.60 4.17
1847 1930 3.655276 AGAGTGCAAAGCAAAAGATGG 57.345 42.857 0.00 0.00 41.47 3.51
1944 2027 5.861251 TGCAACTTTTGTTAATAAGGCATCG 59.139 36.000 0.00 0.00 41.35 3.84
1966 2049 5.397534 CGCTGCACATTTAATCTTTATCTGC 59.602 40.000 0.00 0.00 0.00 4.26
2061 2150 2.034558 TGCCAAAAGAACAAGCAGCTAC 59.965 45.455 0.00 0.00 0.00 3.58
2062 2151 2.034558 GTGCCAAAAGAACAAGCAGCTA 59.965 45.455 0.00 0.00 33.37 3.32
2335 2448 4.088421 CGTATCGCCTGCTCGTTT 57.912 55.556 0.00 0.00 0.00 3.60
2477 2590 0.319555 CGTAGTATGTCCGGGCCATG 60.320 60.000 2.12 0.00 0.00 3.66
2478 2591 0.757935 ACGTAGTATGTCCGGGCCAT 60.758 55.000 2.12 8.24 41.94 4.40
2479 2592 0.106769 TACGTAGTATGTCCGGGCCA 60.107 55.000 2.12 0.00 45.11 5.36
2480 2593 0.595095 CTACGTAGTATGTCCGGGCC 59.405 60.000 14.66 0.00 44.56 5.80
2482 2595 2.843701 AGTCTACGTAGTATGTCCGGG 58.156 52.381 21.53 0.00 44.56 5.73
2483 2596 3.431572 GCTAGTCTACGTAGTATGTCCGG 59.568 52.174 21.53 0.00 44.56 5.14
2487 2600 4.327982 TCGGCTAGTCTACGTAGTATGT 57.672 45.455 21.53 7.98 44.56 2.29
2488 2601 5.859521 ATTCGGCTAGTCTACGTAGTATG 57.140 43.478 21.53 11.61 44.56 2.39
2489 2602 5.762218 ACAATTCGGCTAGTCTACGTAGTAT 59.238 40.000 21.53 13.70 44.56 2.12
2490 2603 5.118990 ACAATTCGGCTAGTCTACGTAGTA 58.881 41.667 21.53 7.53 45.11 1.82
2492 2605 4.548991 ACAATTCGGCTAGTCTACGTAG 57.451 45.455 16.73 16.73 0.00 3.51
2493 2606 4.395854 TGAACAATTCGGCTAGTCTACGTA 59.604 41.667 0.00 0.00 0.00 3.57
2495 2608 3.766151 TGAACAATTCGGCTAGTCTACG 58.234 45.455 0.00 0.00 0.00 3.51
2511 2624 0.392706 TTCTTCTCGCAGGCTGAACA 59.607 50.000 20.86 0.00 0.00 3.18
2519 2632 4.106197 GTGTATGTACCTTCTTCTCGCAG 58.894 47.826 0.00 0.00 0.00 5.18
2520 2633 3.427098 CGTGTATGTACCTTCTTCTCGCA 60.427 47.826 0.00 0.00 0.00 5.10
2523 2636 4.106029 TGCGTGTATGTACCTTCTTCTC 57.894 45.455 0.00 0.00 0.00 2.87
2524 2637 3.676324 GCTGCGTGTATGTACCTTCTTCT 60.676 47.826 0.00 0.00 0.00 2.85
2525 2638 2.603560 GCTGCGTGTATGTACCTTCTTC 59.396 50.000 0.00 0.00 0.00 2.87
2526 2639 2.618053 GCTGCGTGTATGTACCTTCTT 58.382 47.619 0.00 0.00 0.00 2.52
2527 2640 1.469251 CGCTGCGTGTATGTACCTTCT 60.469 52.381 14.93 0.00 0.00 2.85
2553 2681 1.290009 GTGCTTTCTTGCCGCCAAT 59.710 52.632 0.00 0.00 0.00 3.16
2554 2682 2.727544 GTGCTTTCTTGCCGCCAA 59.272 55.556 0.00 0.00 0.00 4.52
2638 2779 4.709886 TGACTAACCTAAGCATGCACTAGA 59.290 41.667 21.98 3.86 0.00 2.43
2639 2780 5.011090 TGACTAACCTAAGCATGCACTAG 57.989 43.478 21.98 18.49 0.00 2.57
2648 2789 4.010349 ACATTTGCCTGACTAACCTAAGC 58.990 43.478 0.00 0.00 0.00 3.09
2664 2806 4.980590 ACACACGCATGGTATTACATTTG 58.019 39.130 0.00 0.00 0.00 2.32
2673 2815 1.258676 TACAGGACACACGCATGGTA 58.741 50.000 0.00 0.00 0.00 3.25
2674 2816 0.394938 TTACAGGACACACGCATGGT 59.605 50.000 0.00 0.00 0.00 3.55
2680 2822 7.591006 AATAGTTGTATTTACAGGACACACG 57.409 36.000 0.00 0.00 37.52 4.49
2686 2828 9.555727 GCCATCTAAATAGTTGTATTTACAGGA 57.444 33.333 0.00 0.00 39.23 3.86
2688 2830 9.256477 TCGCCATCTAAATAGTTGTATTTACAG 57.744 33.333 0.00 0.00 39.23 2.74
2689 2831 9.256477 CTCGCCATCTAAATAGTTGTATTTACA 57.744 33.333 0.00 0.00 39.23 2.41
2690 2832 8.221766 GCTCGCCATCTAAATAGTTGTATTTAC 58.778 37.037 0.00 0.00 39.23 2.01
2691 2833 7.929245 TGCTCGCCATCTAAATAGTTGTATTTA 59.071 33.333 0.00 0.00 39.23 1.40
2692 2834 6.765989 TGCTCGCCATCTAAATAGTTGTATTT 59.234 34.615 0.00 0.00 41.05 1.40
2694 2836 5.853936 TGCTCGCCATCTAAATAGTTGTAT 58.146 37.500 0.00 0.00 0.00 2.29
2695 2837 5.270893 TGCTCGCCATCTAAATAGTTGTA 57.729 39.130 0.00 0.00 0.00 2.41
2696 2838 4.137116 TGCTCGCCATCTAAATAGTTGT 57.863 40.909 0.00 0.00 0.00 3.32
2697 2839 4.553547 GCTTGCTCGCCATCTAAATAGTTG 60.554 45.833 0.00 0.00 0.00 3.16
2700 2842 2.156504 CGCTTGCTCGCCATCTAAATAG 59.843 50.000 0.00 0.00 0.00 1.73
2701 2843 2.135139 CGCTTGCTCGCCATCTAAATA 58.865 47.619 0.00 0.00 0.00 1.40
2702 2844 0.940126 CGCTTGCTCGCCATCTAAAT 59.060 50.000 0.00 0.00 0.00 1.40
2703 2845 0.391130 ACGCTTGCTCGCCATCTAAA 60.391 50.000 0.00 0.00 0.00 1.85
2704 2846 0.458260 TACGCTTGCTCGCCATCTAA 59.542 50.000 0.00 0.00 0.00 2.10
2705 2847 0.673985 ATACGCTTGCTCGCCATCTA 59.326 50.000 0.00 0.00 0.00 1.98
2706 2848 0.598680 GATACGCTTGCTCGCCATCT 60.599 55.000 0.00 0.00 0.00 2.90
2707 2849 0.875908 TGATACGCTTGCTCGCCATC 60.876 55.000 0.00 0.00 0.00 3.51
2708 2850 0.250038 ATGATACGCTTGCTCGCCAT 60.250 50.000 0.00 0.00 0.00 4.40
2709 2851 0.461870 AATGATACGCTTGCTCGCCA 60.462 50.000 0.00 0.00 0.00 5.69
2711 2853 1.595489 CCAAATGATACGCTTGCTCGC 60.595 52.381 0.00 0.00 0.00 5.03
2720 2907 5.907866 AACTTTTACCCCCAAATGATACG 57.092 39.130 0.00 0.00 0.00 3.06
2722 2909 9.548631 TGATTTAACTTTTACCCCCAAATGATA 57.451 29.630 0.00 0.00 0.00 2.15
2733 2920 6.973843 ACCGACCTTTGATTTAACTTTTACC 58.026 36.000 0.00 0.00 0.00 2.85
2737 2924 5.278315 GCAGACCGACCTTTGATTTAACTTT 60.278 40.000 0.00 0.00 0.00 2.66
2740 2927 3.500680 TGCAGACCGACCTTTGATTTAAC 59.499 43.478 0.00 0.00 0.00 2.01
2741 2928 3.745799 TGCAGACCGACCTTTGATTTAA 58.254 40.909 0.00 0.00 0.00 1.52
2742 2929 3.410631 TGCAGACCGACCTTTGATTTA 57.589 42.857 0.00 0.00 0.00 1.40
2745 2932 1.347707 TCTTGCAGACCGACCTTTGAT 59.652 47.619 0.00 0.00 0.00 2.57
2747 2934 1.813513 ATCTTGCAGACCGACCTTTG 58.186 50.000 0.00 0.00 0.00 2.77
2749 2936 1.482593 CCTATCTTGCAGACCGACCTT 59.517 52.381 0.00 0.00 0.00 3.50
2751 2938 0.530870 GCCTATCTTGCAGACCGACC 60.531 60.000 0.00 0.00 0.00 4.79
2752 2939 0.175760 TGCCTATCTTGCAGACCGAC 59.824 55.000 0.00 0.00 34.05 4.79
2753 2940 2.590704 TGCCTATCTTGCAGACCGA 58.409 52.632 0.00 0.00 34.05 4.69
2768 2960 5.520649 GTGAAATCTTGCTACTAGTACTGCC 59.479 44.000 5.39 0.00 0.00 4.85
2769 2961 6.100004 TGTGAAATCTTGCTACTAGTACTGC 58.900 40.000 5.39 2.78 0.00 4.40
2770 2962 7.316640 ACTGTGAAATCTTGCTACTAGTACTG 58.683 38.462 5.39 0.00 0.00 2.74
2771 2963 7.469537 ACTGTGAAATCTTGCTACTAGTACT 57.530 36.000 0.00 0.00 0.00 2.73
2772 2964 8.535690 AAACTGTGAAATCTTGCTACTAGTAC 57.464 34.615 0.00 0.00 0.00 2.73
2773 2965 8.364894 TGAAACTGTGAAATCTTGCTACTAGTA 58.635 33.333 1.89 1.89 0.00 1.82
2774 2966 7.217200 TGAAACTGTGAAATCTTGCTACTAGT 58.783 34.615 0.00 0.00 0.00 2.57
2775 2967 7.658179 TGAAACTGTGAAATCTTGCTACTAG 57.342 36.000 0.00 0.00 0.00 2.57
2776 2968 8.621532 AATGAAACTGTGAAATCTTGCTACTA 57.378 30.769 0.00 0.00 0.00 1.82
2782 2977 8.854979 TGTACAAATGAAACTGTGAAATCTTG 57.145 30.769 0.00 0.00 0.00 3.02
2785 2980 9.248291 ACATTGTACAAATGAAACTGTGAAATC 57.752 29.630 13.23 0.00 0.00 2.17
2793 2988 7.771183 AGTGTCAACATTGTACAAATGAAACT 58.229 30.769 24.99 24.99 31.24 2.66
2795 2990 7.490725 CCAAGTGTCAACATTGTACAAATGAAA 59.509 33.333 13.23 9.83 0.00 2.69
2807 3002 4.277476 TCCAACTTCCAAGTGTCAACATT 58.723 39.130 0.00 0.00 39.66 2.71
2813 3008 2.031683 CGTGTTCCAACTTCCAAGTGTC 59.968 50.000 0.00 0.00 39.66 3.67
2814 3009 2.014128 CGTGTTCCAACTTCCAAGTGT 58.986 47.619 0.00 0.00 39.66 3.55
2828 3023 2.903350 ACAAACCCGGCCGTGTTC 60.903 61.111 26.20 0.00 0.00 3.18
2831 3026 2.280933 TACACAAACCCGGCCGTG 60.281 61.111 26.12 16.88 35.48 4.94
2833 3028 2.762006 TACGTACACAAACCCGGCCG 62.762 60.000 21.04 21.04 0.00 6.13
2834 3029 1.005156 TACGTACACAAACCCGGCC 60.005 57.895 0.00 0.00 0.00 6.13
2835 3030 0.319813 ACTACGTACACAAACCCGGC 60.320 55.000 0.00 0.00 0.00 6.13
2862 3060 6.398621 CGTGTAATTAGTATACTCACGCATGC 60.399 42.308 22.96 7.91 39.97 4.06
2864 3062 6.732154 ACGTGTAATTAGTATACTCACGCAT 58.268 36.000 29.33 16.93 46.76 4.73
2872 3070 5.565723 CGCCCAACGTGTAATTAGTATAC 57.434 43.478 0.00 0.00 36.87 1.47
2888 3086 2.280524 CACCAACGAGACGCCCAA 60.281 61.111 0.00 0.00 0.00 4.12
2902 3100 2.348888 ACCTCCCGATCGTGACACC 61.349 63.158 15.09 0.00 0.00 4.16
2922 3120 3.209812 CAGAGCCGTCCCGATCGA 61.210 66.667 18.66 0.00 0.00 3.59
2923 3121 4.271816 CCAGAGCCGTCCCGATCG 62.272 72.222 8.51 8.51 0.00 3.69
2924 3122 3.917760 CCCAGAGCCGTCCCGATC 61.918 72.222 0.00 0.00 0.00 3.69
2970 3168 3.512680 GCGCAGAGAAATACAGTACTGT 58.487 45.455 30.13 30.13 46.87 3.55
2971 3169 2.531912 CGCGCAGAGAAATACAGTACTG 59.468 50.000 21.44 21.44 0.00 2.74
2972 3170 2.479730 CCGCGCAGAGAAATACAGTACT 60.480 50.000 8.75 0.00 0.00 2.73
2977 3175 1.358725 GCACCGCGCAGAGAAATACA 61.359 55.000 8.75 0.00 41.79 2.29
2992 3190 4.008933 ACCTCCAGAGCACGCACC 62.009 66.667 0.00 0.00 0.00 5.01
2994 3192 2.038814 TTTCACCTCCAGAGCACGCA 62.039 55.000 0.00 0.00 0.00 5.24
2995 3193 1.294659 CTTTCACCTCCAGAGCACGC 61.295 60.000 0.00 0.00 0.00 5.34
2996 3194 1.294659 GCTTTCACCTCCAGAGCACG 61.295 60.000 0.00 0.00 33.68 5.34
2997 3195 1.294659 CGCTTTCACCTCCAGAGCAC 61.295 60.000 0.00 0.00 33.07 4.40
3000 3198 0.034059 ACACGCTTTCACCTCCAGAG 59.966 55.000 0.00 0.00 0.00 3.35
3001 3199 0.249868 CACACGCTTTCACCTCCAGA 60.250 55.000 0.00 0.00 0.00 3.86
3002 3200 0.532862 ACACACGCTTTCACCTCCAG 60.533 55.000 0.00 0.00 0.00 3.86
3003 3201 0.813610 CACACACGCTTTCACCTCCA 60.814 55.000 0.00 0.00 0.00 3.86
3004 3202 0.814010 ACACACACGCTTTCACCTCC 60.814 55.000 0.00 0.00 0.00 4.30
3005 3203 0.304705 CACACACACGCTTTCACCTC 59.695 55.000 0.00 0.00 0.00 3.85
3006 3204 0.392461 ACACACACACGCTTTCACCT 60.392 50.000 0.00 0.00 0.00 4.00
3007 3205 0.248054 CACACACACACGCTTTCACC 60.248 55.000 0.00 0.00 0.00 4.02
3008 3206 0.446222 ACACACACACACGCTTTCAC 59.554 50.000 0.00 0.00 0.00 3.18
3009 3207 0.445829 CACACACACACACGCTTTCA 59.554 50.000 0.00 0.00 0.00 2.69
3010 3208 0.446222 ACACACACACACACGCTTTC 59.554 50.000 0.00 0.00 0.00 2.62
3011 3209 0.878416 AACACACACACACACGCTTT 59.122 45.000 0.00 0.00 0.00 3.51
3012 3210 0.167908 CAACACACACACACACGCTT 59.832 50.000 0.00 0.00 0.00 4.68
3013 3211 1.643868 CCAACACACACACACACGCT 61.644 55.000 0.00 0.00 0.00 5.07
3014 3212 1.226267 CCAACACACACACACACGC 60.226 57.895 0.00 0.00 0.00 5.34
3015 3213 1.360820 TACCAACACACACACACACG 58.639 50.000 0.00 0.00 0.00 4.49
3016 3214 2.474856 CGTTACCAACACACACACACAC 60.475 50.000 0.00 0.00 0.00 3.82
3017 3215 1.732809 CGTTACCAACACACACACACA 59.267 47.619 0.00 0.00 0.00 3.72
3018 3216 1.062880 CCGTTACCAACACACACACAC 59.937 52.381 0.00 0.00 0.00 3.82
3019 3217 1.338864 ACCGTTACCAACACACACACA 60.339 47.619 0.00 0.00 0.00 3.72
3020 3218 1.371595 ACCGTTACCAACACACACAC 58.628 50.000 0.00 0.00 0.00 3.82
3027 3225 1.336148 CGACAGCTACCGTTACCAACA 60.336 52.381 0.00 0.00 0.00 3.33
3134 3333 4.690748 CGTTCATCCATACACTGTCACTTT 59.309 41.667 0.00 0.00 0.00 2.66
3142 3343 3.450817 TGTCATCCGTTCATCCATACACT 59.549 43.478 0.00 0.00 0.00 3.55
3146 3347 2.429250 ACGTGTCATCCGTTCATCCATA 59.571 45.455 0.00 0.00 34.28 2.74
3186 3387 9.953565 AAACTAGTACTGCTAATAATCAAACCA 57.046 29.630 5.39 0.00 0.00 3.67
3197 3398 4.508461 TGACGCAAACTAGTACTGCTAA 57.492 40.909 21.31 9.00 33.82 3.09
3199 3400 3.254060 CATGACGCAAACTAGTACTGCT 58.746 45.455 21.31 12.20 33.82 4.24
3200 3401 2.348666 CCATGACGCAAACTAGTACTGC 59.651 50.000 16.39 16.39 0.00 4.40
3201 3402 2.348666 GCCATGACGCAAACTAGTACTG 59.651 50.000 5.39 0.00 0.00 2.74
3202 3403 2.233922 AGCCATGACGCAAACTAGTACT 59.766 45.455 0.00 0.00 0.00 2.73
3203 3404 2.348666 CAGCCATGACGCAAACTAGTAC 59.651 50.000 0.00 0.00 0.00 2.73
3204 3405 2.616960 CAGCCATGACGCAAACTAGTA 58.383 47.619 0.00 0.00 0.00 1.82
3205 3406 1.442769 CAGCCATGACGCAAACTAGT 58.557 50.000 0.00 0.00 0.00 2.57
3206 3407 0.729116 CCAGCCATGACGCAAACTAG 59.271 55.000 0.00 0.00 0.00 2.57
3251 3452 0.516877 GCTTGCACGCATGAACTACA 59.483 50.000 10.77 0.00 0.00 2.74
3333 3534 0.665369 CGGACGCGGACAGTAAACTT 60.665 55.000 12.47 0.00 0.00 2.66
3354 3555 0.098728 CAAATGATTCGCCCGTCACC 59.901 55.000 0.00 0.00 0.00 4.02
3382 3583 3.506844 TTGTAATACAAAGCGGGGAAACC 59.493 43.478 2.97 0.00 42.37 3.27
3383 3584 4.769859 TTGTAATACAAAGCGGGGAAAC 57.230 40.909 2.97 0.00 34.76 2.78
3393 3594 5.067413 TCGGTTGGTTGCTTTGTAATACAAA 59.933 36.000 16.57 16.57 44.91 2.83
3394 3595 4.579340 TCGGTTGGTTGCTTTGTAATACAA 59.421 37.500 1.08 1.08 36.11 2.41
3395 3596 4.135306 TCGGTTGGTTGCTTTGTAATACA 58.865 39.130 0.00 0.00 0.00 2.29
3396 3597 4.752661 TCGGTTGGTTGCTTTGTAATAC 57.247 40.909 0.00 0.00 0.00 1.89
3397 3598 8.614346 GTTATATCGGTTGGTTGCTTTGTAATA 58.386 33.333 0.00 0.00 0.00 0.98
3398 3599 7.415877 GGTTATATCGGTTGGTTGCTTTGTAAT 60.416 37.037 0.00 0.00 0.00 1.89
3399 3600 6.127952 GGTTATATCGGTTGGTTGCTTTGTAA 60.128 38.462 0.00 0.00 0.00 2.41
3400 3601 5.354792 GGTTATATCGGTTGGTTGCTTTGTA 59.645 40.000 0.00 0.00 0.00 2.41
3401 3602 4.157105 GGTTATATCGGTTGGTTGCTTTGT 59.843 41.667 0.00 0.00 0.00 2.83
3402 3603 4.668289 GGTTATATCGGTTGGTTGCTTTG 58.332 43.478 0.00 0.00 0.00 2.77
3403 3604 3.375922 CGGTTATATCGGTTGGTTGCTTT 59.624 43.478 0.00 0.00 0.00 3.51
3404 3605 2.940410 CGGTTATATCGGTTGGTTGCTT 59.060 45.455 0.00 0.00 0.00 3.91
3405 3606 2.168936 TCGGTTATATCGGTTGGTTGCT 59.831 45.455 0.00 0.00 0.00 3.91
3406 3607 2.286025 GTCGGTTATATCGGTTGGTTGC 59.714 50.000 0.00 0.00 0.00 4.17
3407 3608 2.536803 CGTCGGTTATATCGGTTGGTTG 59.463 50.000 0.00 0.00 0.00 3.77
3408 3609 2.426738 TCGTCGGTTATATCGGTTGGTT 59.573 45.455 0.00 0.00 0.00 3.67
3409 3610 2.023673 TCGTCGGTTATATCGGTTGGT 58.976 47.619 0.00 0.00 0.00 3.67
3410 3611 2.780065 TCGTCGGTTATATCGGTTGG 57.220 50.000 0.00 0.00 0.00 3.77
3411 3612 4.409570 CCTATCGTCGGTTATATCGGTTG 58.590 47.826 0.00 0.00 0.00 3.77
3412 3613 3.441572 CCCTATCGTCGGTTATATCGGTT 59.558 47.826 0.00 0.00 0.00 4.44
3413 3614 3.012518 CCCTATCGTCGGTTATATCGGT 58.987 50.000 0.00 0.00 0.00 4.69
3414 3615 3.012518 ACCCTATCGTCGGTTATATCGG 58.987 50.000 0.00 0.00 0.00 4.18
3415 3616 3.937706 AGACCCTATCGTCGGTTATATCG 59.062 47.826 0.00 0.00 37.85 2.92
3416 3617 4.096081 CCAGACCCTATCGTCGGTTATATC 59.904 50.000 0.00 0.00 37.85 1.63
3417 3618 4.015084 CCAGACCCTATCGTCGGTTATAT 58.985 47.826 0.00 0.00 37.85 0.86
3418 3619 3.415212 CCAGACCCTATCGTCGGTTATA 58.585 50.000 0.00 0.00 37.85 0.98
3419 3620 2.236766 CCAGACCCTATCGTCGGTTAT 58.763 52.381 0.00 0.00 37.85 1.89
3420 3621 1.683943 CCAGACCCTATCGTCGGTTA 58.316 55.000 0.00 0.00 37.85 2.85
3421 3622 1.041447 CCCAGACCCTATCGTCGGTT 61.041 60.000 0.00 0.00 37.85 4.44
3422 3623 1.455217 CCCAGACCCTATCGTCGGT 60.455 63.158 0.00 0.00 37.85 4.69
3423 3624 2.201022 CCCCAGACCCTATCGTCGG 61.201 68.421 0.00 0.00 37.85 4.79
3424 3625 2.857744 GCCCCAGACCCTATCGTCG 61.858 68.421 0.00 0.00 37.85 5.12
3425 3626 2.857744 CGCCCCAGACCCTATCGTC 61.858 68.421 0.00 0.00 0.00 4.20
3426 3627 2.838225 CGCCCCAGACCCTATCGT 60.838 66.667 0.00 0.00 0.00 3.73
3427 3628 1.682451 TTTCGCCCCAGACCCTATCG 61.682 60.000 0.00 0.00 0.00 2.92
3428 3629 0.106894 CTTTCGCCCCAGACCCTATC 59.893 60.000 0.00 0.00 0.00 2.08
3429 3630 1.984288 GCTTTCGCCCCAGACCCTAT 61.984 60.000 0.00 0.00 0.00 2.57
3430 3631 2.666098 GCTTTCGCCCCAGACCCTA 61.666 63.158 0.00 0.00 0.00 3.53
3431 3632 4.035102 GCTTTCGCCCCAGACCCT 62.035 66.667 0.00 0.00 0.00 4.34
3432 3633 4.344865 TGCTTTCGCCCCAGACCC 62.345 66.667 0.00 0.00 34.43 4.46
3433 3634 2.747855 CTGCTTTCGCCCCAGACC 60.748 66.667 0.00 0.00 34.43 3.85
3434 3635 3.435186 GCTGCTTTCGCCCCAGAC 61.435 66.667 0.00 0.00 34.43 3.51
3435 3636 3.952508 TGCTGCTTTCGCCCCAGA 61.953 61.111 0.00 0.00 34.43 3.86
3436 3637 3.741476 GTGCTGCTTTCGCCCCAG 61.741 66.667 0.00 0.00 34.43 4.45
3437 3638 4.577677 TGTGCTGCTTTCGCCCCA 62.578 61.111 0.00 0.00 34.43 4.96
3438 3639 2.855514 TTTGTGCTGCTTTCGCCCC 61.856 57.895 0.00 0.00 34.43 5.80
3439 3640 1.661509 GTTTGTGCTGCTTTCGCCC 60.662 57.895 0.00 0.00 34.43 6.13
3440 3641 1.065600 TGTTTGTGCTGCTTTCGCC 59.934 52.632 0.00 0.00 34.43 5.54
3441 3642 1.531522 CGTGTTTGTGCTGCTTTCGC 61.532 55.000 0.00 0.00 0.00 4.70
3442 3643 1.531522 GCGTGTTTGTGCTGCTTTCG 61.532 55.000 0.00 0.00 0.00 3.46
3443 3644 1.208642 GGCGTGTTTGTGCTGCTTTC 61.209 55.000 0.00 0.00 0.00 2.62
3444 3645 1.226945 GGCGTGTTTGTGCTGCTTT 60.227 52.632 0.00 0.00 0.00 3.51
3445 3646 2.412937 GGCGTGTTTGTGCTGCTT 59.587 55.556 0.00 0.00 0.00 3.91
3446 3647 3.595758 GGGCGTGTTTGTGCTGCT 61.596 61.111 0.00 0.00 0.00 4.24
3447 3648 2.897641 TTTGGGCGTGTTTGTGCTGC 62.898 55.000 0.00 0.00 0.00 5.25
3448 3649 0.459237 TTTTGGGCGTGTTTGTGCTG 60.459 50.000 0.00 0.00 0.00 4.41
3449 3650 0.179113 CTTTTGGGCGTGTTTGTGCT 60.179 50.000 0.00 0.00 0.00 4.40
3450 3651 0.179124 TCTTTTGGGCGTGTTTGTGC 60.179 50.000 0.00 0.00 0.00 4.57
3451 3652 2.285827 TTCTTTTGGGCGTGTTTGTG 57.714 45.000 0.00 0.00 0.00 3.33
3452 3653 2.418060 CCTTTCTTTTGGGCGTGTTTGT 60.418 45.455 0.00 0.00 0.00 2.83
3453 3654 2.159170 TCCTTTCTTTTGGGCGTGTTTG 60.159 45.455 0.00 0.00 0.00 2.93
3454 3655 2.104170 TCCTTTCTTTTGGGCGTGTTT 58.896 42.857 0.00 0.00 0.00 2.83
3455 3656 1.770294 TCCTTTCTTTTGGGCGTGTT 58.230 45.000 0.00 0.00 0.00 3.32
3456 3657 1.770294 TTCCTTTCTTTTGGGCGTGT 58.230 45.000 0.00 0.00 0.00 4.49
3457 3658 2.880963 TTTCCTTTCTTTTGGGCGTG 57.119 45.000 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.