Multiple sequence alignment - TraesCS5D01G317900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G317900 chr5D 100.000 2943 0 0 1 2943 410868118 410865176 0.000000e+00 5435.0
1 TraesCS5D01G317900 chr5D 84.584 746 86 19 1098 1824 411225846 411225111 0.000000e+00 713.0
2 TraesCS5D01G317900 chr5D 92.095 253 20 0 2530 2782 82715486 82715738 1.000000e-94 357.0
3 TraesCS5D01G317900 chr5D 84.091 352 47 4 1184 1526 411149305 411148954 6.080000e-87 331.0
4 TraesCS5D01G317900 chr5D 84.058 345 52 3 1183 1526 410444212 410444554 2.190000e-86 329.0
5 TraesCS5D01G317900 chr5D 76.471 595 116 17 1194 1779 411627693 411628272 4.770000e-78 302.0
6 TraesCS5D01G317900 chr5D 82.386 352 53 3 1184 1526 410952929 410952578 6.170000e-77 298.0
7 TraesCS5D01G317900 chr5A 90.889 1328 60 16 818 2138 522862014 522860741 0.000000e+00 1725.0
8 TraesCS5D01G317900 chr5A 82.388 829 121 17 1098 1905 523148792 523147968 0.000000e+00 699.0
9 TraesCS5D01G317900 chr5A 82.229 332 59 0 1196 1527 523136770 523137101 1.330000e-73 287.0
10 TraesCS5D01G317900 chr5A 92.708 96 7 0 260 355 522862106 522862011 3.960000e-29 139.0
11 TraesCS5D01G317900 chr5A 93.151 73 5 0 2338 2410 522860323 522860251 1.120000e-19 108.0
12 TraesCS5D01G317900 chr5A 97.500 40 1 0 2138 2177 522860719 522860680 5.260000e-08 69.4
13 TraesCS5D01G317900 chr5B 93.934 1121 51 5 1016 2133 493174661 493173555 0.000000e+00 1677.0
14 TraesCS5D01G317900 chr5B 81.270 929 125 32 1098 1993 493695527 493694615 0.000000e+00 706.0
15 TraesCS5D01G317900 chr5B 91.741 448 33 4 565 1009 493181261 493180815 1.160000e-173 619.0
16 TraesCS5D01G317900 chr5B 86.780 469 30 18 7 444 493181726 493181259 7.330000e-136 494.0
17 TraesCS5D01G317900 chr5B 90.310 258 22 3 4 259 445179614 445179358 4.700000e-88 335.0
18 TraesCS5D01G317900 chr5B 82.282 333 59 0 1194 1526 493931468 493931800 3.710000e-74 289.0
19 TraesCS5D01G317900 chr5B 81.818 352 55 5 1184 1526 493481090 493480739 1.330000e-73 287.0
20 TraesCS5D01G317900 chr5B 81.138 334 60 3 1193 1525 494296548 494296217 6.250000e-67 265.0
21 TraesCS5D01G317900 chr5B 89.720 107 5 1 461 567 578545849 578545749 6.620000e-27 132.0
22 TraesCS5D01G317900 chr2A 94.650 243 13 0 2537 2779 544306317 544306559 7.700000e-101 377.0
23 TraesCS5D01G317900 chr7D 93.852 244 14 1 2538 2780 217957353 217957110 1.670000e-97 366.0
24 TraesCS5D01G317900 chr7D 92.126 254 19 1 2527 2780 391440060 391439808 1.000000e-94 357.0
25 TraesCS5D01G317900 chr7D 90.837 251 19 3 1 250 11043435 11043682 1.690000e-87 333.0
26 TraesCS5D01G317900 chr6D 93.496 246 14 2 2538 2782 410823451 410823207 5.990000e-97 364.0
27 TraesCS5D01G317900 chr2B 92.157 255 20 0 2527 2781 570801458 570801204 7.750000e-96 361.0
28 TraesCS5D01G317900 chr2B 91.235 251 19 3 2 250 436266087 436266336 3.630000e-89 339.0
29 TraesCS5D01G317900 chr2B 91.071 112 9 1 458 569 455464214 455464324 1.830000e-32 150.0
30 TraesCS5D01G317900 chr2B 95.238 42 2 0 458 499 723559592 723559633 1.890000e-07 67.6
31 TraesCS5D01G317900 chr2B 91.111 45 4 0 461 505 69813710 69813666 8.810000e-06 62.1
32 TraesCS5D01G317900 chr4D 92.126 254 20 0 2527 2780 499060294 499060547 2.790000e-95 359.0
33 TraesCS5D01G317900 chr4D 91.765 255 21 0 2527 2781 114381269 114381015 3.610000e-94 355.0
34 TraesCS5D01G317900 chr4D 91.304 253 17 5 1 250 12695886 12696136 1.010000e-89 340.0
35 TraesCS5D01G317900 chr4D 89.815 108 7 2 461 568 28103841 28103738 5.120000e-28 135.0
36 TraesCS5D01G317900 chr2D 91.797 256 19 2 2537 2790 106814646 106814901 3.610000e-94 355.0
37 TraesCS5D01G317900 chr2D 90.698 258 20 4 4 259 641491314 641491059 1.010000e-89 340.0
38 TraesCS5D01G317900 chr3B 90.840 262 20 4 1 259 62389261 62389521 6.040000e-92 348.0
39 TraesCS5D01G317900 chr7B 91.270 252 19 3 1 250 217303291 217303541 1.010000e-89 340.0
40 TraesCS5D01G317900 chr7B 92.920 113 8 0 2779 2891 537539256 537539368 6.530000e-37 165.0
41 TraesCS5D01G317900 chr7B 94.505 91 4 1 488 577 577382163 577382253 3.960000e-29 139.0
42 TraesCS5D01G317900 chr3D 91.235 251 17 5 4 253 5039882 5040128 1.310000e-88 337.0
43 TraesCS5D01G317900 chr3D 88.889 117 5 4 458 566 23953107 23953223 1.420000e-28 137.0
44 TraesCS5D01G317900 chr3D 89.091 110 5 6 488 593 460333420 460333526 2.380000e-26 130.0
45 TraesCS5D01G317900 chr6B 90.347 259 20 5 4 259 260601306 260601050 4.700000e-88 335.0
46 TraesCS5D01G317900 chr6B 91.262 103 9 0 466 568 310283175 310283277 1.100000e-29 141.0
47 TraesCS5D01G317900 chr7A 92.920 113 8 0 2779 2891 443976186 443976074 6.530000e-37 165.0
48 TraesCS5D01G317900 chrUn 92.035 113 9 0 2779 2891 272029932 272030044 3.040000e-35 159.0
49 TraesCS5D01G317900 chrUn 92.035 113 9 0 2779 2891 296574431 296574543 3.040000e-35 159.0
50 TraesCS5D01G317900 chrUn 92.035 113 9 0 2779 2891 394974802 394974914 3.040000e-35 159.0
51 TraesCS5D01G317900 chrUn 96.000 75 3 0 2869 2943 343216409 343216483 3.980000e-24 122.0
52 TraesCS5D01G317900 chrUn 94.667 75 4 0 2869 2943 343216714 343216788 1.850000e-22 117.0
53 TraesCS5D01G317900 chrUn 93.333 75 5 0 2869 2943 70893292 70893218 8.620000e-21 111.0
54 TraesCS5D01G317900 chrUn 92.000 75 6 0 2869 2943 70888654 70888580 4.010000e-19 106.0
55 TraesCS5D01G317900 chr4A 92.035 113 9 0 2779 2891 668170914 668171026 3.040000e-35 159.0
56 TraesCS5D01G317900 chr4A 92.035 113 9 0 2779 2891 668178786 668178898 3.040000e-35 159.0
57 TraesCS5D01G317900 chr4A 92.035 113 9 0 2779 2891 668221239 668221351 3.040000e-35 159.0
58 TraesCS5D01G317900 chr4A 92.035 113 9 0 2779 2891 668229121 668229233 3.040000e-35 159.0
59 TraesCS5D01G317900 chr4B 89.091 110 7 5 461 568 54291448 54291554 6.620000e-27 132.0
60 TraesCS5D01G317900 chr1D 83.571 140 14 8 458 592 259665827 259665962 3.980000e-24 122.0
61 TraesCS5D01G317900 chr6A 94.667 75 4 0 2869 2943 2500717 2500643 1.850000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G317900 chr5D 410865176 410868118 2942 True 5435.00 5435 100.0000 1 2943 1 chr5D.!!$R1 2942
1 TraesCS5D01G317900 chr5D 411225111 411225846 735 True 713.00 713 84.5840 1098 1824 1 chr5D.!!$R4 726
2 TraesCS5D01G317900 chr5D 411627693 411628272 579 False 302.00 302 76.4710 1194 1779 1 chr5D.!!$F3 585
3 TraesCS5D01G317900 chr5A 523147968 523148792 824 True 699.00 699 82.3880 1098 1905 1 chr5A.!!$R1 807
4 TraesCS5D01G317900 chr5A 522860251 522862106 1855 True 510.35 1725 93.5620 260 2410 4 chr5A.!!$R2 2150
5 TraesCS5D01G317900 chr5B 493173555 493174661 1106 True 1677.00 1677 93.9340 1016 2133 1 chr5B.!!$R2 1117
6 TraesCS5D01G317900 chr5B 493694615 493695527 912 True 706.00 706 81.2700 1098 1993 1 chr5B.!!$R4 895
7 TraesCS5D01G317900 chr5B 493180815 493181726 911 True 556.50 619 89.2605 7 1009 2 chr5B.!!$R7 1002

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
793 828 0.034059 ATGGAGGCGCGGATAGAAAG 59.966 55.0 8.83 0.0 0.0 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2518 2852 0.031616 TTGGGGCAAAAACCTCACCT 60.032 50.0 0.0 0.0 40.96 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 64 5.931724 TCAATCATGACAGTACAACGAACAT 59.068 36.000 0.00 0.00 0.00 2.71
65 67 3.737032 TGACAGTACAACGAACATCCA 57.263 42.857 0.00 0.00 0.00 3.41
104 106 3.905968 TCCAGATCCGTAGACCACATAA 58.094 45.455 0.00 0.00 0.00 1.90
127 129 0.710567 CGACTACAAGCACTGAAGCG 59.289 55.000 0.00 0.00 40.15 4.68
170 173 3.917760 CCCCTCATCGCCGGAGTC 61.918 72.222 5.05 0.00 0.00 3.36
186 189 1.299089 GTCGGGCACAACTTGTTGC 60.299 57.895 12.76 4.23 0.00 4.17
188 191 1.299316 CGGGCACAACTTGTTGCAG 60.299 57.895 12.76 7.58 0.00 4.41
193 196 2.287009 GGCACAACTTGTTGCAGTAGAC 60.287 50.000 12.76 0.00 0.00 2.59
209 212 0.536687 AGACAGTCGGGAAGTCGTCA 60.537 55.000 0.00 0.00 37.36 4.35
215 218 1.135199 GTCGGGAAGTCGTCATGCTAA 60.135 52.381 0.00 0.00 0.00 3.09
224 227 1.202568 TCGTCATGCTAAGGCCTCATG 60.203 52.381 21.51 21.51 39.02 3.07
226 229 0.475475 TCATGCTAAGGCCTCATGGG 59.525 55.000 25.05 8.06 38.41 4.00
228 231 0.769873 ATGCTAAGGCCTCATGGGAG 59.230 55.000 5.23 0.00 41.02 4.30
242 245 2.669569 GGAGCAGCGCACCAGAAA 60.670 61.111 11.47 0.00 39.08 2.52
250 253 1.732917 CGCACCAGAAAAGCAACCA 59.267 52.632 0.00 0.00 0.00 3.67
271 299 1.340991 CCACGGATCCAACCCAAAGAT 60.341 52.381 13.41 0.00 0.00 2.40
418 450 9.720667 CATGTACATGATAAACTACAATGGTTG 57.279 33.333 28.41 0.00 41.20 3.77
452 484 5.640189 ATCGTTATAATGTACTCCCTCCG 57.360 43.478 4.63 0.00 0.00 4.63
453 485 4.717877 TCGTTATAATGTACTCCCTCCGA 58.282 43.478 4.63 0.00 0.00 4.55
454 486 5.319453 TCGTTATAATGTACTCCCTCCGAT 58.681 41.667 4.63 0.00 0.00 4.18
455 487 5.413833 TCGTTATAATGTACTCCCTCCGATC 59.586 44.000 4.63 0.00 0.00 3.69
456 488 5.392811 CGTTATAATGTACTCCCTCCGATCC 60.393 48.000 0.00 0.00 0.00 3.36
457 489 1.329256 AATGTACTCCCTCCGATCCG 58.671 55.000 0.00 0.00 0.00 4.18
458 490 0.477204 ATGTACTCCCTCCGATCCGA 59.523 55.000 0.00 0.00 0.00 4.55
459 491 0.256752 TGTACTCCCTCCGATCCGAA 59.743 55.000 0.00 0.00 0.00 4.30
460 492 1.341285 TGTACTCCCTCCGATCCGAAA 60.341 52.381 0.00 0.00 0.00 3.46
461 493 1.962100 GTACTCCCTCCGATCCGAAAT 59.038 52.381 0.00 0.00 0.00 2.17
462 494 1.497161 ACTCCCTCCGATCCGAAATT 58.503 50.000 0.00 0.00 0.00 1.82
463 495 1.838077 ACTCCCTCCGATCCGAAATTT 59.162 47.619 0.00 0.00 0.00 1.82
464 496 2.158943 ACTCCCTCCGATCCGAAATTTC 60.159 50.000 8.20 8.20 0.00 2.17
465 497 1.834896 TCCCTCCGATCCGAAATTTCA 59.165 47.619 17.99 0.00 0.00 2.69
466 498 2.237643 TCCCTCCGATCCGAAATTTCAA 59.762 45.455 17.99 5.91 0.00 2.69
467 499 2.354821 CCCTCCGATCCGAAATTTCAAC 59.645 50.000 17.99 5.21 0.00 3.18
468 500 3.006940 CCTCCGATCCGAAATTTCAACA 58.993 45.455 17.99 1.41 0.00 3.33
469 501 3.438781 CCTCCGATCCGAAATTTCAACAA 59.561 43.478 17.99 0.70 0.00 2.83
470 502 4.437390 CCTCCGATCCGAAATTTCAACAAG 60.437 45.833 17.99 6.08 0.00 3.16
471 503 4.069304 TCCGATCCGAAATTTCAACAAGT 58.931 39.130 17.99 0.00 0.00 3.16
472 504 4.083537 TCCGATCCGAAATTTCAACAAGTG 60.084 41.667 17.99 0.00 0.00 3.16
473 505 4.083537 CCGATCCGAAATTTCAACAAGTGA 60.084 41.667 17.99 3.31 0.00 3.41
474 506 4.846137 CGATCCGAAATTTCAACAAGTGAC 59.154 41.667 17.99 0.00 35.39 3.67
475 507 5.334105 CGATCCGAAATTTCAACAAGTGACT 60.334 40.000 17.99 0.00 35.39 3.41
476 508 6.128661 CGATCCGAAATTTCAACAAGTGACTA 60.129 38.462 17.99 0.00 35.39 2.59
477 509 6.295039 TCCGAAATTTCAACAAGTGACTAC 57.705 37.500 17.99 0.00 35.39 2.73
478 510 5.818336 TCCGAAATTTCAACAAGTGACTACA 59.182 36.000 17.99 0.00 35.39 2.74
479 511 6.485313 TCCGAAATTTCAACAAGTGACTACAT 59.515 34.615 17.99 0.00 35.39 2.29
480 512 7.658167 TCCGAAATTTCAACAAGTGACTACATA 59.342 33.333 17.99 0.00 35.39 2.29
481 513 7.744715 CCGAAATTTCAACAAGTGACTACATAC 59.255 37.037 17.99 0.00 35.39 2.39
482 514 7.474332 CGAAATTTCAACAAGTGACTACATACG 59.526 37.037 17.99 0.00 35.39 3.06
483 515 7.956420 AATTTCAACAAGTGACTACATACGA 57.044 32.000 0.00 0.00 35.39 3.43
484 516 7.956420 ATTTCAACAAGTGACTACATACGAA 57.044 32.000 0.00 0.00 35.39 3.85
485 517 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
486 518 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
487 519 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
488 520 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
489 521 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
490 522 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
491 523 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
492 524 7.601130 ACAAGTGACTACATACGAAGCAAAATA 59.399 33.333 0.00 0.00 0.00 1.40
493 525 8.604035 CAAGTGACTACATACGAAGCAAAATAT 58.396 33.333 0.00 0.00 0.00 1.28
494 526 8.131455 AGTGACTACATACGAAGCAAAATATG 57.869 34.615 0.00 0.00 0.00 1.78
495 527 7.764443 AGTGACTACATACGAAGCAAAATATGT 59.236 33.333 0.00 8.26 40.47 2.29
496 528 8.056571 GTGACTACATACGAAGCAAAATATGTC 58.943 37.037 6.89 0.00 38.75 3.06
497 529 7.979537 TGACTACATACGAAGCAAAATATGTCT 59.020 33.333 6.89 0.00 38.75 3.41
498 530 9.459640 GACTACATACGAAGCAAAATATGTCTA 57.540 33.333 6.89 0.00 38.75 2.59
499 531 9.982651 ACTACATACGAAGCAAAATATGTCTAT 57.017 29.630 6.89 0.00 38.75 1.98
509 541 9.944376 AAGCAAAATATGTCTATATACATCCGT 57.056 29.630 7.00 0.00 40.52 4.69
516 548 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
518 550 8.866970 TGTCTATATACATCCGTATGTGGTAA 57.133 34.615 3.56 0.00 45.99 2.85
519 551 9.470399 TGTCTATATACATCCGTATGTGGTAAT 57.530 33.333 3.56 0.00 45.99 1.89
525 557 8.918202 ATACATCCGTATGTGGTAATTCATTT 57.082 30.769 3.56 0.00 45.99 2.32
526 558 7.026631 ACATCCGTATGTGGTAATTCATTTG 57.973 36.000 0.00 0.00 44.79 2.32
527 559 6.826231 ACATCCGTATGTGGTAATTCATTTGA 59.174 34.615 0.00 0.00 44.79 2.69
528 560 7.338196 ACATCCGTATGTGGTAATTCATTTGAA 59.662 33.333 0.00 0.00 44.79 2.69
529 561 7.689446 TCCGTATGTGGTAATTCATTTGAAA 57.311 32.000 0.00 0.00 37.61 2.69
530 562 8.287439 TCCGTATGTGGTAATTCATTTGAAAT 57.713 30.769 0.00 0.00 37.61 2.17
531 563 9.397280 TCCGTATGTGGTAATTCATTTGAAATA 57.603 29.630 0.00 0.00 37.61 1.40
561 593 7.568199 AATGACAAATATTTAGGAACGGAGG 57.432 36.000 0.00 0.00 0.00 4.30
562 594 5.433526 TGACAAATATTTAGGAACGGAGGG 58.566 41.667 0.00 0.00 0.00 4.30
563 595 5.190132 TGACAAATATTTAGGAACGGAGGGA 59.810 40.000 0.00 0.00 0.00 4.20
593 626 9.904198 TGAGATATTTGATTGTCCAATCTTGTA 57.096 29.630 18.09 9.93 45.55 2.41
606 639 7.919091 TGTCCAATCTTGTAGTATTGTATCGAC 59.081 37.037 0.00 0.00 32.34 4.20
673 708 2.667137 CGAGGCCGATACATTTCTCTC 58.333 52.381 0.00 0.00 38.22 3.20
675 710 3.243569 CGAGGCCGATACATTTCTCTCTT 60.244 47.826 0.00 0.00 38.22 2.85
690 725 9.912634 CATTTCTCTCTTTATATGTCTCTCTCC 57.087 37.037 0.00 0.00 0.00 3.71
709 744 1.154430 CCTAGCTAGGTCCCCTCTCT 58.846 60.000 28.90 0.00 38.69 3.10
725 760 0.548510 CTCTGATCCCCAAACCCCTC 59.451 60.000 0.00 0.00 0.00 4.30
729 764 0.840617 GATCCCCAAACCCCTCTCTC 59.159 60.000 0.00 0.00 0.00 3.20
736 771 2.363683 CAAACCCCTCTCTCTTGCATC 58.636 52.381 0.00 0.00 0.00 3.91
738 773 0.324738 ACCCCTCTCTCTTGCATCGA 60.325 55.000 0.00 0.00 0.00 3.59
754 789 2.198827 TCGACATGCACATTCCCTTT 57.801 45.000 0.00 0.00 0.00 3.11
762 797 2.627699 TGCACATTCCCTTTCTCAAACC 59.372 45.455 0.00 0.00 0.00 3.27
769 804 3.050089 TCCCTTTCTCAAACCCACACTA 58.950 45.455 0.00 0.00 0.00 2.74
783 818 0.108138 ACACTAGTGAATGGAGGCGC 60.108 55.000 29.30 0.00 0.00 6.53
786 821 2.016393 CTAGTGAATGGAGGCGCGGA 62.016 60.000 8.83 0.00 0.00 5.54
793 828 0.034059 ATGGAGGCGCGGATAGAAAG 59.966 55.000 8.83 0.00 0.00 2.62
797 832 2.973052 GCGCGGATAGAAAGGGGC 60.973 66.667 8.83 0.00 0.00 5.80
805 840 2.537143 GATAGAAAGGGGCCTCGGATA 58.463 52.381 0.84 0.00 0.00 2.59
807 842 1.132500 AGAAAGGGGCCTCGGATAAG 58.868 55.000 0.84 0.00 0.00 1.73
811 846 1.069258 GGGGCCTCGGATAAGAACG 59.931 63.158 0.84 0.00 0.00 3.95
870 905 4.454948 GCAAAGTGCAAAACCCCC 57.545 55.556 0.00 0.00 44.26 5.40
1009 1044 2.784889 TAGGCACGCCACCGGTTTAC 62.785 60.000 2.97 0.00 39.22 2.01
1010 1045 2.667199 GCACGCCACCGGTTTACT 60.667 61.111 2.97 0.00 39.22 2.24
1011 1046 2.961669 GCACGCCACCGGTTTACTG 61.962 63.158 2.97 0.00 39.22 2.74
1012 1047 1.301087 CACGCCACCGGTTTACTGA 60.301 57.895 2.97 0.00 39.22 3.41
1013 1048 1.005394 ACGCCACCGGTTTACTGAG 60.005 57.895 2.97 0.00 39.22 3.35
1043 1078 1.589716 CCCAGCAAGGTAGCAGCAAC 61.590 60.000 11.19 0.00 36.85 4.17
1044 1079 0.890542 CCAGCAAGGTAGCAGCAACA 60.891 55.000 11.19 0.00 36.85 3.33
1045 1080 0.953727 CAGCAAGGTAGCAGCAACAA 59.046 50.000 11.19 0.00 36.85 2.83
1051 1086 4.142403 GCAAGGTAGCAGCAACAATCATAA 60.142 41.667 0.00 0.00 0.00 1.90
1103 1145 2.768492 CCTTCCTCGCCAGCAATGC 61.768 63.158 0.00 0.00 0.00 3.56
1137 1179 4.379243 CAAGTGGAGCTCGCCGGT 62.379 66.667 7.83 0.00 0.00 5.28
1141 1183 4.735132 TGGAGCTCGCCGGTTTCG 62.735 66.667 7.83 0.00 0.00 3.46
1458 1503 4.821589 CGCCGTGCCCTCTTCTCC 62.822 72.222 0.00 0.00 0.00 3.71
1871 1941 3.781760 ACGCTCCGTGGGTTCTAA 58.218 55.556 0.00 0.00 39.18 2.10
1875 1945 2.234414 ACGCTCCGTGGGTTCTAATTTA 59.766 45.455 0.00 0.00 39.18 1.40
1930 2000 4.747108 GGCTATCATCACACATCACTACAC 59.253 45.833 0.00 0.00 0.00 2.90
1985 2056 4.074627 TCAAACCGGTCTCACATAACAA 57.925 40.909 8.04 0.00 0.00 2.83
1986 2057 3.810941 TCAAACCGGTCTCACATAACAAC 59.189 43.478 8.04 0.00 0.00 3.32
2020 2091 0.744414 TAGATGGACAAGCAAGCGGC 60.744 55.000 0.00 0.00 45.30 6.53
2049 2120 7.148557 GGTTCTTCATTCTCCTAAAAAGACGAG 60.149 40.741 0.00 0.00 0.00 4.18
2052 2123 5.734720 TCATTCTCCTAAAAAGACGAGCAT 58.265 37.500 0.00 0.00 0.00 3.79
2133 2207 1.270412 ACCATAACAAGCGACGTCCAA 60.270 47.619 10.58 0.00 0.00 3.53
2141 2237 2.158959 GCGACGTCCAACAGATCCG 61.159 63.158 10.58 0.00 0.00 4.18
2188 2328 8.169977 ACACTTCTGCTTTCATTCTCATTTTA 57.830 30.769 0.00 0.00 0.00 1.52
2207 2347 7.812669 TCATTTTAGAAATCATCGCTATCGCTA 59.187 33.333 0.00 0.00 35.26 4.26
2211 2351 6.196079 AGAAATCATCGCTATCGCTATACA 57.804 37.500 0.00 0.00 35.26 2.29
2213 2353 3.385079 TCATCGCTATCGCTATACACG 57.615 47.619 0.00 0.00 35.26 4.49
2220 2360 2.690173 ATCGCTATACACGAGCTGTC 57.310 50.000 0.00 0.00 43.74 3.51
2261 2405 2.343758 GCCTGTGAGCGAGGAACA 59.656 61.111 0.00 0.00 31.48 3.18
2262 2406 1.739562 GCCTGTGAGCGAGGAACAG 60.740 63.158 0.00 0.00 40.81 3.16
2263 2407 1.668294 CCTGTGAGCGAGGAACAGT 59.332 57.895 0.00 0.00 39.75 3.55
2266 2410 2.213499 CTGTGAGCGAGGAACAGTTTT 58.787 47.619 0.00 0.00 37.20 2.43
2267 2411 2.614057 CTGTGAGCGAGGAACAGTTTTT 59.386 45.455 0.00 0.00 37.20 1.94
2287 2431 2.986311 TTTTTCTGAGTGAGCGCGT 58.014 47.368 8.43 0.00 0.00 6.01
2288 2432 1.295792 TTTTTCTGAGTGAGCGCGTT 58.704 45.000 8.43 0.00 0.00 4.84
2289 2433 1.295792 TTTTCTGAGTGAGCGCGTTT 58.704 45.000 8.43 0.00 0.00 3.60
2290 2434 1.295792 TTTCTGAGTGAGCGCGTTTT 58.704 45.000 8.43 0.00 0.00 2.43
2291 2435 1.295792 TTCTGAGTGAGCGCGTTTTT 58.704 45.000 8.43 0.00 0.00 1.94
2328 2472 0.594284 GAGCGAGTGGTACGGTATGC 60.594 60.000 0.00 0.00 41.38 3.14
2329 2473 1.590792 GCGAGTGGTACGGTATGCC 60.591 63.158 0.00 0.00 0.00 4.40
2330 2474 1.811195 CGAGTGGTACGGTATGCCA 59.189 57.895 0.00 0.00 41.49 4.92
2334 2478 2.352821 TGGTACGGTATGCCACGCT 61.353 57.895 0.00 0.00 38.32 5.07
2336 2480 1.590792 GTACGGTATGCCACGCTCC 60.591 63.158 0.00 0.00 34.09 4.70
2343 2677 0.827925 TATGCCACGCTCCTAGAGGG 60.828 60.000 7.08 7.08 46.05 4.30
2349 2683 1.070445 CGCTCCTAGAGGGCAATGG 59.930 63.158 8.98 0.00 35.94 3.16
2350 2684 1.402896 CGCTCCTAGAGGGCAATGGA 61.403 60.000 8.98 0.00 35.94 3.41
2351 2685 0.107643 GCTCCTAGAGGGCAATGGAC 59.892 60.000 0.00 0.00 35.41 4.02
2398 2732 8.827177 TTTACTAAGATATTTATGTGGCCTCG 57.173 34.615 3.32 0.00 0.00 4.63
2410 2744 5.818678 ATGTGGCCTCGGTTAGATATTTA 57.181 39.130 3.32 0.00 0.00 1.40
2411 2745 4.952460 TGTGGCCTCGGTTAGATATTTAC 58.048 43.478 3.32 0.00 0.00 2.01
2412 2746 3.985925 GTGGCCTCGGTTAGATATTTACG 59.014 47.826 3.32 0.00 0.00 3.18
2413 2747 3.890756 TGGCCTCGGTTAGATATTTACGA 59.109 43.478 3.32 0.00 0.00 3.43
2414 2748 4.525487 TGGCCTCGGTTAGATATTTACGAT 59.475 41.667 3.32 0.00 0.00 3.73
2415 2749 5.011329 TGGCCTCGGTTAGATATTTACGATT 59.989 40.000 3.32 0.00 0.00 3.34
2416 2750 5.347907 GGCCTCGGTTAGATATTTACGATTG 59.652 44.000 0.00 0.00 0.00 2.67
2417 2751 6.154445 GCCTCGGTTAGATATTTACGATTGA 58.846 40.000 0.00 0.00 0.00 2.57
2418 2752 6.812160 GCCTCGGTTAGATATTTACGATTGAT 59.188 38.462 0.00 0.00 0.00 2.57
2419 2753 7.331193 GCCTCGGTTAGATATTTACGATTGATT 59.669 37.037 0.00 0.00 0.00 2.57
2420 2754 9.204570 CCTCGGTTAGATATTTACGATTGATTT 57.795 33.333 0.00 0.00 0.00 2.17
2440 2774 3.591196 TTTTGTTTCAGCAGCTGTTGT 57.409 38.095 27.01 5.04 32.61 3.32
2441 2775 2.849880 TTGTTTCAGCAGCTGTTGTC 57.150 45.000 27.01 18.86 32.61 3.18
2442 2776 1.024271 TGTTTCAGCAGCTGTTGTCC 58.976 50.000 27.01 16.98 32.61 4.02
2443 2777 0.040958 GTTTCAGCAGCTGTTGTCCG 60.041 55.000 27.01 4.92 32.61 4.79
2444 2778 0.463654 TTTCAGCAGCTGTTGTCCGT 60.464 50.000 27.01 0.00 32.61 4.69
2445 2779 0.880278 TTCAGCAGCTGTTGTCCGTC 60.880 55.000 27.01 3.08 32.61 4.79
2446 2780 2.356313 AGCAGCTGTTGTCCGTCG 60.356 61.111 16.64 0.00 0.00 5.12
2447 2781 2.355837 GCAGCTGTTGTCCGTCGA 60.356 61.111 16.64 0.00 0.00 4.20
2448 2782 2.658707 GCAGCTGTTGTCCGTCGAC 61.659 63.158 16.64 5.18 39.66 4.20
2449 2783 2.050351 AGCTGTTGTCCGTCGACG 60.050 61.111 30.33 30.33 42.37 5.12
2450 2784 3.764049 GCTGTTGTCCGTCGACGC 61.764 66.667 31.73 19.56 42.37 5.19
2451 2785 2.050351 CTGTTGTCCGTCGACGCT 60.050 61.111 31.73 0.00 42.37 5.07
2452 2786 1.660575 CTGTTGTCCGTCGACGCTT 60.661 57.895 31.73 0.00 42.37 4.68
2453 2787 1.606350 CTGTTGTCCGTCGACGCTTC 61.606 60.000 31.73 21.88 42.37 3.86
2484 2818 2.464582 GGGGGTGGAGTTCTTCTGT 58.535 57.895 0.00 0.00 0.00 3.41
2485 2819 0.036875 GGGGGTGGAGTTCTTCTGTG 59.963 60.000 0.00 0.00 0.00 3.66
2486 2820 0.606673 GGGGTGGAGTTCTTCTGTGC 60.607 60.000 0.00 0.00 0.00 4.57
2487 2821 0.606673 GGGTGGAGTTCTTCTGTGCC 60.607 60.000 0.00 0.00 0.00 5.01
2488 2822 0.398318 GGTGGAGTTCTTCTGTGCCT 59.602 55.000 0.00 0.00 0.00 4.75
2489 2823 1.202818 GGTGGAGTTCTTCTGTGCCTT 60.203 52.381 0.00 0.00 0.00 4.35
2490 2824 1.876156 GTGGAGTTCTTCTGTGCCTTG 59.124 52.381 0.00 0.00 0.00 3.61
2491 2825 1.202806 TGGAGTTCTTCTGTGCCTTGG 60.203 52.381 0.00 0.00 0.00 3.61
2492 2826 1.528129 GAGTTCTTCTGTGCCTTGGG 58.472 55.000 0.00 0.00 0.00 4.12
2493 2827 0.111253 AGTTCTTCTGTGCCTTGGGG 59.889 55.000 0.00 0.00 0.00 4.96
2494 2828 0.895559 GTTCTTCTGTGCCTTGGGGG 60.896 60.000 0.00 0.00 38.36 5.40
2508 2842 3.300013 GGGGGTGGAGTTCTCGAG 58.700 66.667 5.93 5.93 0.00 4.04
2509 2843 2.359967 GGGGGTGGAGTTCTCGAGG 61.360 68.421 13.56 0.00 0.00 4.63
2510 2844 1.305046 GGGGTGGAGTTCTCGAGGA 60.305 63.158 13.56 0.00 0.00 3.71
2511 2845 1.324005 GGGGTGGAGTTCTCGAGGAG 61.324 65.000 13.56 0.00 0.00 3.69
2512 2846 0.612453 GGGTGGAGTTCTCGAGGAGT 60.612 60.000 13.56 6.69 0.00 3.85
2513 2847 1.340795 GGGTGGAGTTCTCGAGGAGTA 60.341 57.143 13.56 0.00 0.00 2.59
2514 2848 2.018515 GGTGGAGTTCTCGAGGAGTAG 58.981 57.143 13.56 0.00 0.00 2.57
2515 2849 2.355920 GGTGGAGTTCTCGAGGAGTAGA 60.356 54.545 13.56 0.00 0.00 2.59
2516 2850 2.940410 GTGGAGTTCTCGAGGAGTAGAG 59.060 54.545 13.56 0.00 35.91 2.43
2517 2851 2.092861 TGGAGTTCTCGAGGAGTAGAGG 60.093 54.545 13.56 0.00 35.34 3.69
2518 2852 2.171027 GGAGTTCTCGAGGAGTAGAGGA 59.829 54.545 13.56 0.00 35.34 3.71
2519 2853 3.463944 GAGTTCTCGAGGAGTAGAGGAG 58.536 54.545 13.56 0.00 35.34 3.69
2520 2854 2.171870 AGTTCTCGAGGAGTAGAGGAGG 59.828 54.545 13.56 0.00 35.34 4.30
2521 2855 1.882308 TCTCGAGGAGTAGAGGAGGT 58.118 55.000 13.56 0.00 35.34 3.85
2522 2856 1.487142 TCTCGAGGAGTAGAGGAGGTG 59.513 57.143 13.56 0.00 35.34 4.00
2523 2857 1.487142 CTCGAGGAGTAGAGGAGGTGA 59.513 57.143 3.91 0.00 0.00 4.02
2524 2858 1.487142 TCGAGGAGTAGAGGAGGTGAG 59.513 57.143 0.00 0.00 0.00 3.51
2525 2859 1.476110 CGAGGAGTAGAGGAGGTGAGG 60.476 61.905 0.00 0.00 0.00 3.86
2526 2860 1.567175 GAGGAGTAGAGGAGGTGAGGT 59.433 57.143 0.00 0.00 0.00 3.85
2527 2861 2.004589 AGGAGTAGAGGAGGTGAGGTT 58.995 52.381 0.00 0.00 0.00 3.50
2528 2862 2.384029 AGGAGTAGAGGAGGTGAGGTTT 59.616 50.000 0.00 0.00 0.00 3.27
2529 2863 3.174779 GGAGTAGAGGAGGTGAGGTTTT 58.825 50.000 0.00 0.00 0.00 2.43
2530 2864 3.583526 GGAGTAGAGGAGGTGAGGTTTTT 59.416 47.826 0.00 0.00 0.00 1.94
2531 2865 4.563786 GGAGTAGAGGAGGTGAGGTTTTTG 60.564 50.000 0.00 0.00 0.00 2.44
2532 2866 2.278332 AGAGGAGGTGAGGTTTTTGC 57.722 50.000 0.00 0.00 0.00 3.68
2533 2867 1.202940 AGAGGAGGTGAGGTTTTTGCC 60.203 52.381 0.00 0.00 0.00 4.52
2534 2868 0.178961 AGGAGGTGAGGTTTTTGCCC 60.179 55.000 0.00 0.00 0.00 5.36
2535 2869 1.185618 GGAGGTGAGGTTTTTGCCCC 61.186 60.000 0.00 0.00 0.00 5.80
2536 2870 0.469144 GAGGTGAGGTTTTTGCCCCA 60.469 55.000 0.00 0.00 0.00 4.96
2537 2871 0.031616 AGGTGAGGTTTTTGCCCCAA 60.032 50.000 0.00 0.00 0.00 4.12
2538 2872 0.105964 GGTGAGGTTTTTGCCCCAAC 59.894 55.000 0.00 0.00 0.00 3.77
2539 2873 1.119684 GTGAGGTTTTTGCCCCAACT 58.880 50.000 0.00 0.00 0.00 3.16
2540 2874 2.312390 GTGAGGTTTTTGCCCCAACTA 58.688 47.619 0.00 0.00 0.00 2.24
2541 2875 2.296190 GTGAGGTTTTTGCCCCAACTAG 59.704 50.000 0.00 0.00 0.00 2.57
2542 2876 1.272490 GAGGTTTTTGCCCCAACTAGC 59.728 52.381 0.00 0.00 0.00 3.42
2543 2877 1.044611 GGTTTTTGCCCCAACTAGCA 58.955 50.000 0.00 0.00 37.18 3.49
2544 2878 1.414550 GGTTTTTGCCCCAACTAGCAA 59.585 47.619 0.00 0.00 46.74 3.91
2549 2883 1.691196 TGCCCCAACTAGCAATATGC 58.309 50.000 0.00 0.00 45.46 3.14
2550 2884 0.961753 GCCCCAACTAGCAATATGCC 59.038 55.000 0.00 0.00 46.52 4.40
2551 2885 1.620822 CCCCAACTAGCAATATGCCC 58.379 55.000 0.00 0.00 46.52 5.36
2552 2886 1.133513 CCCCAACTAGCAATATGCCCA 60.134 52.381 0.00 0.00 46.52 5.36
2553 2887 2.491455 CCCCAACTAGCAATATGCCCAT 60.491 50.000 0.00 0.00 46.52 4.00
2554 2888 2.559668 CCCAACTAGCAATATGCCCATG 59.440 50.000 0.00 0.00 46.52 3.66
2555 2889 2.029649 CCAACTAGCAATATGCCCATGC 60.030 50.000 0.00 0.00 46.52 4.06
2556 2890 1.527034 ACTAGCAATATGCCCATGCG 58.473 50.000 0.00 0.00 46.52 4.73
2557 2891 1.202806 ACTAGCAATATGCCCATGCGT 60.203 47.619 0.00 0.00 46.52 5.24
2558 2892 1.881973 CTAGCAATATGCCCATGCGTT 59.118 47.619 0.00 0.00 46.52 4.84
2559 2893 0.386476 AGCAATATGCCCATGCGTTG 59.614 50.000 0.00 0.00 46.52 4.10
2560 2894 0.102844 GCAATATGCCCATGCGTTGT 59.897 50.000 0.00 0.00 41.78 3.32
2561 2895 1.336440 GCAATATGCCCATGCGTTGTA 59.664 47.619 0.00 0.00 41.78 2.41
2562 2896 2.858260 GCAATATGCCCATGCGTTGTAC 60.858 50.000 0.00 0.00 41.78 2.90
2563 2897 1.225855 ATATGCCCATGCGTTGTACG 58.774 50.000 0.00 0.00 45.88 3.67
2564 2898 0.812014 TATGCCCATGCGTTGTACGG 60.812 55.000 1.14 0.00 42.82 4.02
2566 2900 2.461110 GCCCATGCGTTGTACGGAG 61.461 63.158 1.14 0.00 46.90 4.63
2567 2901 2.461110 CCCATGCGTTGTACGGAGC 61.461 63.158 1.14 0.14 46.90 4.70
2568 2902 1.739929 CCATGCGTTGTACGGAGCA 60.740 57.895 10.56 10.56 46.90 4.26
2569 2903 1.089481 CCATGCGTTGTACGGAGCAT 61.089 55.000 13.62 13.62 46.90 3.79
2570 2904 0.301687 CATGCGTTGTACGGAGCATC 59.698 55.000 15.68 0.00 46.90 3.91
2571 2905 0.108377 ATGCGTTGTACGGAGCATCA 60.108 50.000 13.62 0.00 46.90 3.07
2572 2906 0.319986 TGCGTTGTACGGAGCATCAA 60.320 50.000 5.08 0.00 42.82 2.57
2573 2907 0.370273 GCGTTGTACGGAGCATCAAG 59.630 55.000 1.14 0.00 42.82 3.02
2574 2908 1.990799 CGTTGTACGGAGCATCAAGA 58.009 50.000 0.00 0.00 38.08 3.02
2575 2909 2.540515 CGTTGTACGGAGCATCAAGAT 58.459 47.619 0.00 0.00 38.08 2.40
2576 2910 2.282555 CGTTGTACGGAGCATCAAGATG 59.717 50.000 5.70 5.70 38.08 2.90
2592 2926 8.151141 CATCAAGATGCATTTGTATGAGTAGT 57.849 34.615 0.00 0.00 33.37 2.73
2593 2927 8.618677 CATCAAGATGCATTTGTATGAGTAGTT 58.381 33.333 0.00 0.00 33.37 2.24
2594 2928 8.565896 TCAAGATGCATTTGTATGAGTAGTTT 57.434 30.769 0.00 0.00 33.37 2.66
2595 2929 9.665719 TCAAGATGCATTTGTATGAGTAGTTTA 57.334 29.630 0.00 0.00 33.37 2.01
2605 2939 9.575868 TTTGTATGAGTAGTTTATTTTGTGGGA 57.424 29.630 0.00 0.00 0.00 4.37
2606 2940 8.786826 TGTATGAGTAGTTTATTTTGTGGGAG 57.213 34.615 0.00 0.00 0.00 4.30
2607 2941 8.598916 TGTATGAGTAGTTTATTTTGTGGGAGA 58.401 33.333 0.00 0.00 0.00 3.71
2608 2942 9.444600 GTATGAGTAGTTTATTTTGTGGGAGAA 57.555 33.333 0.00 0.00 0.00 2.87
2609 2943 8.934023 ATGAGTAGTTTATTTTGTGGGAGAAA 57.066 30.769 0.00 0.00 0.00 2.52
2610 2944 8.754991 TGAGTAGTTTATTTTGTGGGAGAAAA 57.245 30.769 0.00 0.00 0.00 2.29
2611 2945 9.362151 TGAGTAGTTTATTTTGTGGGAGAAAAT 57.638 29.630 0.00 0.00 36.98 1.82
2612 2946 9.626045 GAGTAGTTTATTTTGTGGGAGAAAATG 57.374 33.333 0.00 0.00 35.25 2.32
2613 2947 9.362151 AGTAGTTTATTTTGTGGGAGAAAATGA 57.638 29.630 0.00 0.00 35.25 2.57
2616 2950 8.869109 AGTTTATTTTGTGGGAGAAAATGATGA 58.131 29.630 0.00 0.00 35.25 2.92
2617 2951 9.487790 GTTTATTTTGTGGGAGAAAATGATGAA 57.512 29.630 0.00 0.00 35.25 2.57
2618 2952 9.487790 TTTATTTTGTGGGAGAAAATGATGAAC 57.512 29.630 0.00 0.00 35.25 3.18
2619 2953 4.764679 TTGTGGGAGAAAATGATGAACG 57.235 40.909 0.00 0.00 0.00 3.95
2620 2954 4.014569 TGTGGGAGAAAATGATGAACGA 57.985 40.909 0.00 0.00 0.00 3.85
2621 2955 4.002982 TGTGGGAGAAAATGATGAACGAG 58.997 43.478 0.00 0.00 0.00 4.18
2622 2956 3.375299 GTGGGAGAAAATGATGAACGAGG 59.625 47.826 0.00 0.00 0.00 4.63
2623 2957 2.945668 GGGAGAAAATGATGAACGAGGG 59.054 50.000 0.00 0.00 0.00 4.30
2624 2958 3.370527 GGGAGAAAATGATGAACGAGGGA 60.371 47.826 0.00 0.00 0.00 4.20
2625 2959 4.261801 GGAGAAAATGATGAACGAGGGAA 58.738 43.478 0.00 0.00 0.00 3.97
2626 2960 4.333926 GGAGAAAATGATGAACGAGGGAAG 59.666 45.833 0.00 0.00 0.00 3.46
2627 2961 5.165961 AGAAAATGATGAACGAGGGAAGA 57.834 39.130 0.00 0.00 0.00 2.87
2628 2962 4.938226 AGAAAATGATGAACGAGGGAAGAC 59.062 41.667 0.00 0.00 0.00 3.01
2629 2963 2.990066 ATGATGAACGAGGGAAGACC 57.010 50.000 0.00 0.00 40.67 3.85
2644 2978 6.076981 GGGAAGACCTTATTTGCATATGTG 57.923 41.667 4.29 0.00 35.85 3.21
2645 2979 5.507985 GGGAAGACCTTATTTGCATATGTGC 60.508 44.000 7.61 7.61 43.54 4.57
2656 2990 1.671979 CATATGTGCAGAGGGGTGTG 58.328 55.000 0.00 0.00 0.00 3.82
2657 2991 0.548031 ATATGTGCAGAGGGGTGTGG 59.452 55.000 0.00 0.00 0.00 4.17
2658 2992 0.546507 TATGTGCAGAGGGGTGTGGA 60.547 55.000 0.00 0.00 0.00 4.02
2659 2993 1.210204 ATGTGCAGAGGGGTGTGGAT 61.210 55.000 0.00 0.00 0.00 3.41
2660 2994 0.546507 TGTGCAGAGGGGTGTGGATA 60.547 55.000 0.00 0.00 0.00 2.59
2661 2995 0.839946 GTGCAGAGGGGTGTGGATAT 59.160 55.000 0.00 0.00 0.00 1.63
2662 2996 1.131638 TGCAGAGGGGTGTGGATATC 58.868 55.000 0.00 0.00 0.00 1.63
2663 2997 1.344393 TGCAGAGGGGTGTGGATATCT 60.344 52.381 2.05 0.00 0.00 1.98
2664 2998 1.771255 GCAGAGGGGTGTGGATATCTT 59.229 52.381 2.05 0.00 0.00 2.40
2665 2999 2.173569 GCAGAGGGGTGTGGATATCTTT 59.826 50.000 2.05 0.00 0.00 2.52
2666 3000 3.372025 GCAGAGGGGTGTGGATATCTTTT 60.372 47.826 2.05 0.00 0.00 2.27
2667 3001 4.860022 CAGAGGGGTGTGGATATCTTTTT 58.140 43.478 2.05 0.00 0.00 1.94
2668 3002 5.631481 GCAGAGGGGTGTGGATATCTTTTTA 60.631 44.000 2.05 0.00 0.00 1.52
2669 3003 5.823045 CAGAGGGGTGTGGATATCTTTTTAC 59.177 44.000 2.05 0.00 0.00 2.01
2670 3004 5.491078 AGAGGGGTGTGGATATCTTTTTACA 59.509 40.000 2.05 0.00 0.00 2.41
2671 3005 6.011981 AGAGGGGTGTGGATATCTTTTTACAA 60.012 38.462 2.05 0.00 0.00 2.41
2672 3006 6.557568 AGGGGTGTGGATATCTTTTTACAAA 58.442 36.000 2.05 0.00 0.00 2.83
2673 3007 7.013834 AGGGGTGTGGATATCTTTTTACAAAA 58.986 34.615 2.05 0.00 0.00 2.44
2674 3008 7.678171 AGGGGTGTGGATATCTTTTTACAAAAT 59.322 33.333 2.05 0.00 0.00 1.82
2675 3009 8.318412 GGGGTGTGGATATCTTTTTACAAAATT 58.682 33.333 2.05 0.00 0.00 1.82
2676 3010 9.150348 GGGTGTGGATATCTTTTTACAAAATTG 57.850 33.333 2.05 0.00 0.00 2.32
2677 3011 9.705290 GGTGTGGATATCTTTTTACAAAATTGT 57.295 29.630 2.05 4.01 44.86 2.71
2697 3031 7.969536 ATTGTCATAGTTTCCTTCATATCCG 57.030 36.000 0.00 0.00 0.00 4.18
2698 3032 6.479972 TGTCATAGTTTCCTTCATATCCGT 57.520 37.500 0.00 0.00 0.00 4.69
2699 3033 6.513180 TGTCATAGTTTCCTTCATATCCGTC 58.487 40.000 0.00 0.00 0.00 4.79
2700 3034 6.097696 TGTCATAGTTTCCTTCATATCCGTCA 59.902 38.462 0.00 0.00 0.00 4.35
2701 3035 6.642950 GTCATAGTTTCCTTCATATCCGTCAG 59.357 42.308 0.00 0.00 0.00 3.51
2702 3036 6.549736 TCATAGTTTCCTTCATATCCGTCAGA 59.450 38.462 0.00 0.00 0.00 3.27
2703 3037 5.878406 AGTTTCCTTCATATCCGTCAGAT 57.122 39.130 0.00 0.00 39.15 2.90
2704 3038 6.978674 AGTTTCCTTCATATCCGTCAGATA 57.021 37.500 0.00 0.00 41.73 1.98
2706 3040 8.651589 AGTTTCCTTCATATCCGTCAGATATA 57.348 34.615 0.00 0.00 44.83 0.86
2707 3041 9.090103 AGTTTCCTTCATATCCGTCAGATATAA 57.910 33.333 0.00 0.00 44.83 0.98
2708 3042 9.706691 GTTTCCTTCATATCCGTCAGATATAAA 57.293 33.333 0.00 0.00 44.83 1.40
2711 3045 8.406297 TCCTTCATATCCGTCAGATATAAATCG 58.594 37.037 0.00 0.00 44.83 3.34
2712 3046 7.649705 CCTTCATATCCGTCAGATATAAATCGG 59.350 40.741 0.00 0.00 44.83 4.18
2713 3047 7.875327 TCATATCCGTCAGATATAAATCGGA 57.125 36.000 11.86 11.86 44.83 4.55
2714 3048 7.704271 TCATATCCGTCAGATATAAATCGGAC 58.296 38.462 11.76 8.13 44.83 4.79
2719 3053 5.373981 GTCAGATATAAATCGGACGGTCT 57.626 43.478 8.23 0.00 43.98 3.85
2720 3054 6.492007 GTCAGATATAAATCGGACGGTCTA 57.508 41.667 8.23 0.00 43.98 2.59
2721 3055 7.086230 GTCAGATATAAATCGGACGGTCTAT 57.914 40.000 8.23 0.49 43.98 1.98
2722 3056 8.206325 GTCAGATATAAATCGGACGGTCTATA 57.794 38.462 8.23 2.72 43.98 1.31
2723 3057 8.838365 GTCAGATATAAATCGGACGGTCTATAT 58.162 37.037 8.23 7.23 43.98 0.86
2724 3058 9.404848 TCAGATATAAATCGGACGGTCTATATT 57.595 33.333 8.23 3.17 37.19 1.28
2725 3059 9.452065 CAGATATAAATCGGACGGTCTATATTG 57.548 37.037 8.23 5.57 37.19 1.90
2726 3060 8.136165 AGATATAAATCGGACGGTCTATATTGC 58.864 37.037 8.23 0.00 37.19 3.56
2727 3061 4.330944 AAATCGGACGGTCTATATTGCA 57.669 40.909 8.23 0.00 0.00 4.08
2728 3062 3.577649 ATCGGACGGTCTATATTGCAG 57.422 47.619 8.23 0.00 0.00 4.41
2729 3063 1.611977 TCGGACGGTCTATATTGCAGG 59.388 52.381 8.23 0.00 0.00 4.85
2730 3064 1.611977 CGGACGGTCTATATTGCAGGA 59.388 52.381 8.23 0.00 0.00 3.86
2731 3065 2.231478 CGGACGGTCTATATTGCAGGAT 59.769 50.000 8.23 0.00 0.00 3.24
2732 3066 3.589988 GGACGGTCTATATTGCAGGATG 58.410 50.000 8.23 0.00 40.87 3.51
2733 3067 3.589988 GACGGTCTATATTGCAGGATGG 58.410 50.000 0.00 0.00 35.86 3.51
2734 3068 2.289694 ACGGTCTATATTGCAGGATGGC 60.290 50.000 0.00 0.00 35.86 4.40
2735 3069 2.289631 CGGTCTATATTGCAGGATGGCA 60.290 50.000 0.00 0.00 43.19 4.92
2736 3070 3.341823 GGTCTATATTGCAGGATGGCAG 58.658 50.000 0.00 0.00 45.88 4.85
2737 3071 3.341823 GTCTATATTGCAGGATGGCAGG 58.658 50.000 0.00 0.00 45.88 4.85
2738 3072 2.089980 CTATATTGCAGGATGGCAGGC 58.910 52.381 0.00 0.00 45.88 4.85
2739 3073 0.186630 ATATTGCAGGATGGCAGGCA 59.813 50.000 0.00 0.00 45.88 4.75
2740 3074 0.752743 TATTGCAGGATGGCAGGCAC 60.753 55.000 0.00 0.00 45.88 5.01
2741 3075 2.791613 ATTGCAGGATGGCAGGCACA 62.792 55.000 0.00 0.00 45.88 4.57
2742 3076 3.446570 GCAGGATGGCAGGCACAC 61.447 66.667 0.00 0.00 35.86 3.82
2743 3077 2.034532 CAGGATGGCAGGCACACA 59.965 61.111 0.00 0.00 0.00 3.72
2744 3078 1.604308 CAGGATGGCAGGCACACAA 60.604 57.895 0.00 0.00 0.00 3.33
2745 3079 0.968901 CAGGATGGCAGGCACACAAT 60.969 55.000 0.00 0.00 0.00 2.71
2746 3080 0.682209 AGGATGGCAGGCACACAATC 60.682 55.000 0.00 0.00 0.00 2.67
2747 3081 0.966875 GGATGGCAGGCACACAATCA 60.967 55.000 0.00 0.00 0.00 2.57
2748 3082 1.108776 GATGGCAGGCACACAATCAT 58.891 50.000 0.00 0.00 0.00 2.45
2749 3083 1.066605 GATGGCAGGCACACAATCATC 59.933 52.381 0.00 0.00 0.00 2.92
2750 3084 0.251253 TGGCAGGCACACAATCATCA 60.251 50.000 0.00 0.00 0.00 3.07
2751 3085 0.171903 GGCAGGCACACAATCATCAC 59.828 55.000 0.00 0.00 0.00 3.06
2752 3086 0.171903 GCAGGCACACAATCATCACC 59.828 55.000 0.00 0.00 0.00 4.02
2753 3087 1.536940 CAGGCACACAATCATCACCA 58.463 50.000 0.00 0.00 0.00 4.17
2754 3088 1.887854 CAGGCACACAATCATCACCAA 59.112 47.619 0.00 0.00 0.00 3.67
2755 3089 1.888512 AGGCACACAATCATCACCAAC 59.111 47.619 0.00 0.00 0.00 3.77
2756 3090 1.888512 GGCACACAATCATCACCAACT 59.111 47.619 0.00 0.00 0.00 3.16
2757 3091 2.095059 GGCACACAATCATCACCAACTC 60.095 50.000 0.00 0.00 0.00 3.01
2758 3092 2.816087 GCACACAATCATCACCAACTCT 59.184 45.455 0.00 0.00 0.00 3.24
2759 3093 3.365666 GCACACAATCATCACCAACTCTG 60.366 47.826 0.00 0.00 0.00 3.35
2760 3094 3.817084 CACACAATCATCACCAACTCTGT 59.183 43.478 0.00 0.00 0.00 3.41
2761 3095 4.276678 CACACAATCATCACCAACTCTGTT 59.723 41.667 0.00 0.00 0.00 3.16
2762 3096 4.889409 ACACAATCATCACCAACTCTGTTT 59.111 37.500 0.00 0.00 0.00 2.83
2763 3097 5.360714 ACACAATCATCACCAACTCTGTTTT 59.639 36.000 0.00 0.00 0.00 2.43
2764 3098 6.127366 ACACAATCATCACCAACTCTGTTTTT 60.127 34.615 0.00 0.00 0.00 1.94
2806 3140 8.579850 TTTTATTATGTTCAATCTCTGCACCT 57.420 30.769 0.00 0.00 0.00 4.00
2807 3141 8.579850 TTTATTATGTTCAATCTCTGCACCTT 57.420 30.769 0.00 0.00 0.00 3.50
2808 3142 8.579850 TTATTATGTTCAATCTCTGCACCTTT 57.420 30.769 0.00 0.00 0.00 3.11
2809 3143 6.899393 TTATGTTCAATCTCTGCACCTTTT 57.101 33.333 0.00 0.00 0.00 2.27
2810 3144 7.994425 TTATGTTCAATCTCTGCACCTTTTA 57.006 32.000 0.00 0.00 0.00 1.52
2811 3145 8.579850 TTATGTTCAATCTCTGCACCTTTTAT 57.420 30.769 0.00 0.00 0.00 1.40
2812 3146 6.500684 TGTTCAATCTCTGCACCTTTTATC 57.499 37.500 0.00 0.00 0.00 1.75
2813 3147 6.240894 TGTTCAATCTCTGCACCTTTTATCT 58.759 36.000 0.00 0.00 0.00 1.98
2814 3148 7.394016 TGTTCAATCTCTGCACCTTTTATCTA 58.606 34.615 0.00 0.00 0.00 1.98
2815 3149 7.550551 TGTTCAATCTCTGCACCTTTTATCTAG 59.449 37.037 0.00 0.00 0.00 2.43
2816 3150 6.051717 TCAATCTCTGCACCTTTTATCTAGC 58.948 40.000 0.00 0.00 0.00 3.42
2817 3151 5.885449 ATCTCTGCACCTTTTATCTAGCT 57.115 39.130 0.00 0.00 0.00 3.32
2818 3152 5.683876 TCTCTGCACCTTTTATCTAGCTT 57.316 39.130 0.00 0.00 0.00 3.74
2819 3153 6.054860 TCTCTGCACCTTTTATCTAGCTTT 57.945 37.500 0.00 0.00 0.00 3.51
2820 3154 6.476378 TCTCTGCACCTTTTATCTAGCTTTT 58.524 36.000 0.00 0.00 0.00 2.27
2821 3155 6.595716 TCTCTGCACCTTTTATCTAGCTTTTC 59.404 38.462 0.00 0.00 0.00 2.29
2822 3156 6.476378 TCTGCACCTTTTATCTAGCTTTTCT 58.524 36.000 0.00 0.00 0.00 2.52
2823 3157 6.942576 TCTGCACCTTTTATCTAGCTTTTCTT 59.057 34.615 0.00 0.00 0.00 2.52
2824 3158 6.913170 TGCACCTTTTATCTAGCTTTTCTTG 58.087 36.000 0.00 0.00 0.00 3.02
2825 3159 6.714810 TGCACCTTTTATCTAGCTTTTCTTGA 59.285 34.615 0.00 0.00 0.00 3.02
2826 3160 7.394359 TGCACCTTTTATCTAGCTTTTCTTGAT 59.606 33.333 0.00 0.00 39.83 2.57
2827 3161 7.912773 GCACCTTTTATCTAGCTTTTCTTGATC 59.087 37.037 0.00 0.00 38.10 2.92
2828 3162 8.119226 CACCTTTTATCTAGCTTTTCTTGATCG 58.881 37.037 0.00 0.00 38.10 3.69
2829 3163 7.824779 ACCTTTTATCTAGCTTTTCTTGATCGT 59.175 33.333 0.00 0.00 38.10 3.73
2830 3164 8.119226 CCTTTTATCTAGCTTTTCTTGATCGTG 58.881 37.037 0.00 0.00 38.10 4.35
2831 3165 8.547967 TTTTATCTAGCTTTTCTTGATCGTGT 57.452 30.769 0.00 0.00 38.10 4.49
2832 3166 7.525688 TTATCTAGCTTTTCTTGATCGTGTG 57.474 36.000 0.00 0.00 38.10 3.82
2833 3167 4.245660 TCTAGCTTTTCTTGATCGTGTGG 58.754 43.478 0.00 0.00 0.00 4.17
2834 3168 2.851195 AGCTTTTCTTGATCGTGTGGT 58.149 42.857 0.00 0.00 0.00 4.16
2835 3169 2.808543 AGCTTTTCTTGATCGTGTGGTC 59.191 45.455 0.00 0.00 0.00 4.02
2836 3170 2.411547 GCTTTTCTTGATCGTGTGGTCG 60.412 50.000 0.00 0.00 0.00 4.79
2837 3171 2.804697 TTTCTTGATCGTGTGGTCGA 57.195 45.000 0.00 0.00 43.86 4.20
2845 3179 2.341318 TCGTGTGGTCGATGTTACTG 57.659 50.000 0.00 0.00 34.85 2.74
2846 3180 0.713883 CGTGTGGTCGATGTTACTGC 59.286 55.000 0.00 0.00 0.00 4.40
2847 3181 1.790755 GTGTGGTCGATGTTACTGCA 58.209 50.000 0.00 0.00 0.00 4.41
2848 3182 2.346803 GTGTGGTCGATGTTACTGCAT 58.653 47.619 0.00 0.00 0.00 3.96
2849 3183 2.094258 GTGTGGTCGATGTTACTGCATG 59.906 50.000 0.00 0.00 0.00 4.06
2850 3184 2.289382 TGTGGTCGATGTTACTGCATGT 60.289 45.455 0.00 0.00 0.00 3.21
2851 3185 2.742053 GTGGTCGATGTTACTGCATGTT 59.258 45.455 0.00 0.00 0.00 2.71
2852 3186 2.741517 TGGTCGATGTTACTGCATGTTG 59.258 45.455 0.00 0.00 0.00 3.33
2853 3187 3.000041 GGTCGATGTTACTGCATGTTGA 59.000 45.455 0.00 0.00 0.00 3.18
2854 3188 3.623060 GGTCGATGTTACTGCATGTTGAT 59.377 43.478 0.00 0.00 0.00 2.57
2855 3189 4.260375 GGTCGATGTTACTGCATGTTGATC 60.260 45.833 0.00 0.00 0.00 2.92
2856 3190 3.551485 TCGATGTTACTGCATGTTGATCG 59.449 43.478 9.91 9.91 34.23 3.69
2857 3191 3.551485 CGATGTTACTGCATGTTGATCGA 59.449 43.478 10.43 0.00 34.54 3.59
2858 3192 4.209911 CGATGTTACTGCATGTTGATCGAT 59.790 41.667 0.00 0.00 34.54 3.59
2859 3193 5.277011 CGATGTTACTGCATGTTGATCGATT 60.277 40.000 0.00 0.00 34.54 3.34
2860 3194 5.469373 TGTTACTGCATGTTGATCGATTC 57.531 39.130 0.00 0.00 0.00 2.52
2861 3195 5.178061 TGTTACTGCATGTTGATCGATTCT 58.822 37.500 0.00 0.00 0.00 2.40
2862 3196 5.643348 TGTTACTGCATGTTGATCGATTCTT 59.357 36.000 0.00 0.00 0.00 2.52
2863 3197 6.816140 TGTTACTGCATGTTGATCGATTCTTA 59.184 34.615 0.00 0.00 0.00 2.10
2864 3198 7.495606 TGTTACTGCATGTTGATCGATTCTTAT 59.504 33.333 0.00 0.00 0.00 1.73
2865 3199 8.978539 GTTACTGCATGTTGATCGATTCTTATA 58.021 33.333 0.00 0.00 0.00 0.98
2866 3200 9.710900 TTACTGCATGTTGATCGATTCTTATAT 57.289 29.630 0.00 0.00 0.00 0.86
2867 3201 8.613060 ACTGCATGTTGATCGATTCTTATATT 57.387 30.769 0.00 0.00 0.00 1.28
2868 3202 8.715998 ACTGCATGTTGATCGATTCTTATATTC 58.284 33.333 0.00 0.00 0.00 1.75
2869 3203 8.032952 TGCATGTTGATCGATTCTTATATTCC 57.967 34.615 0.00 0.00 0.00 3.01
2870 3204 7.879677 TGCATGTTGATCGATTCTTATATTCCT 59.120 33.333 0.00 0.00 0.00 3.36
2871 3205 8.725148 GCATGTTGATCGATTCTTATATTCCTT 58.275 33.333 0.00 0.00 0.00 3.36
2897 3231 9.832445 TTCTTTTGTCTAAATCTACAGAAGTGT 57.168 29.630 0.00 0.00 38.38 3.55
2912 3246 7.290857 ACAGAAGTGTAGCACATTATTTACG 57.709 36.000 2.01 0.00 36.74 3.18
2913 3247 7.094631 ACAGAAGTGTAGCACATTATTTACGA 58.905 34.615 2.01 0.00 36.74 3.43
2914 3248 7.764443 ACAGAAGTGTAGCACATTATTTACGAT 59.236 33.333 2.01 0.00 36.74 3.73
2915 3249 8.604035 CAGAAGTGTAGCACATTATTTACGATT 58.396 33.333 2.01 0.00 36.74 3.34
2916 3250 8.604035 AGAAGTGTAGCACATTATTTACGATTG 58.396 33.333 2.01 0.00 36.74 2.67
2917 3251 8.487313 AAGTGTAGCACATTATTTACGATTGA 57.513 30.769 2.01 0.00 36.74 2.57
2918 3252 8.662781 AGTGTAGCACATTATTTACGATTGAT 57.337 30.769 2.01 0.00 36.74 2.57
2919 3253 9.109393 AGTGTAGCACATTATTTACGATTGATT 57.891 29.630 2.01 0.00 36.74 2.57
2920 3254 9.158364 GTGTAGCACATTATTTACGATTGATTG 57.842 33.333 0.00 0.00 34.08 2.67
2921 3255 8.888716 TGTAGCACATTATTTACGATTGATTGT 58.111 29.630 0.00 0.00 0.00 2.71
2922 3256 9.716507 GTAGCACATTATTTACGATTGATTGTT 57.283 29.630 0.00 0.00 0.00 2.83
2924 3258 9.075519 AGCACATTATTTACGATTGATTGTTTG 57.924 29.630 0.00 0.00 0.00 2.93
2925 3259 8.859156 GCACATTATTTACGATTGATTGTTTGT 58.141 29.630 0.00 0.00 0.00 2.83
2932 3266 5.622770 ACGATTGATTGTTTGTTCCTACC 57.377 39.130 0.00 0.00 0.00 3.18
2933 3267 4.457949 ACGATTGATTGTTTGTTCCTACCC 59.542 41.667 0.00 0.00 0.00 3.69
2934 3268 4.457603 CGATTGATTGTTTGTTCCTACCCA 59.542 41.667 0.00 0.00 0.00 4.51
2935 3269 5.125417 CGATTGATTGTTTGTTCCTACCCAT 59.875 40.000 0.00 0.00 0.00 4.00
2936 3270 5.720371 TTGATTGTTTGTTCCTACCCATG 57.280 39.130 0.00 0.00 0.00 3.66
2937 3271 3.509575 TGATTGTTTGTTCCTACCCATGC 59.490 43.478 0.00 0.00 0.00 4.06
2938 3272 2.969821 TGTTTGTTCCTACCCATGCT 57.030 45.000 0.00 0.00 0.00 3.79
2939 3273 3.237268 TGTTTGTTCCTACCCATGCTT 57.763 42.857 0.00 0.00 0.00 3.91
2940 3274 3.153919 TGTTTGTTCCTACCCATGCTTC 58.846 45.455 0.00 0.00 0.00 3.86
2941 3275 3.181434 TGTTTGTTCCTACCCATGCTTCT 60.181 43.478 0.00 0.00 0.00 2.85
2942 3276 2.787473 TGTTCCTACCCATGCTTCTG 57.213 50.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 93 3.829948 AGTCGTTGTTATGTGGTCTACG 58.170 45.455 0.00 0.00 0.00 3.51
104 106 2.882927 TCAGTGCTTGTAGTCGTTGT 57.117 45.000 0.00 0.00 0.00 3.32
170 173 1.299316 CTGCAACAAGTTGTGCCCG 60.299 57.895 20.42 12.02 42.31 6.13
186 189 1.130749 CGACTTCCCGACTGTCTACTG 59.869 57.143 6.21 0.00 0.00 2.74
188 191 1.130186 GACGACTTCCCGACTGTCTAC 59.870 57.143 6.21 0.00 0.00 2.59
193 196 1.078759 GCATGACGACTTCCCGACTG 61.079 60.000 0.00 0.00 0.00 3.51
209 212 0.769873 CTCCCATGAGGCCTTAGCAT 59.230 55.000 6.77 2.44 42.56 3.79
215 218 3.806667 GCTGCTCCCATGAGGCCT 61.807 66.667 3.86 3.86 39.14 5.19
224 227 4.704833 TTCTGGTGCGCTGCTCCC 62.705 66.667 9.73 1.10 40.96 4.30
226 229 1.208614 CTTTTCTGGTGCGCTGCTC 59.791 57.895 9.73 0.00 0.00 4.26
228 231 2.429739 GCTTTTCTGGTGCGCTGC 60.430 61.111 9.73 0.69 0.00 5.25
242 245 1.303317 GGATCCGTGGTGGTTGCTT 60.303 57.895 0.00 0.00 39.52 3.91
250 253 0.251165 CTTTGGGTTGGATCCGTGGT 60.251 55.000 7.39 0.00 0.00 4.16
271 299 7.208777 TGGAGACTGTAATAAACGTTTGTGTA 58.791 34.615 23.46 9.52 0.00 2.90
359 387 9.620259 TGGTAGTGTTGCATTTGTATATTCATA 57.380 29.630 0.00 0.00 0.00 2.15
367 395 7.445707 TGAATAGTTGGTAGTGTTGCATTTGTA 59.554 33.333 0.00 0.00 0.00 2.41
433 465 5.392811 CGGATCGGAGGGAGTACATTATAAC 60.393 48.000 0.00 0.00 0.00 1.89
441 473 1.396653 TTTCGGATCGGAGGGAGTAC 58.603 55.000 2.99 0.00 0.00 2.73
442 474 2.376695 ATTTCGGATCGGAGGGAGTA 57.623 50.000 2.99 0.00 0.00 2.59
443 475 1.497161 AATTTCGGATCGGAGGGAGT 58.503 50.000 2.99 0.00 0.00 3.85
444 476 2.158957 TGAAATTTCGGATCGGAGGGAG 60.159 50.000 13.34 0.00 0.00 4.30
445 477 1.834896 TGAAATTTCGGATCGGAGGGA 59.165 47.619 13.34 0.00 0.00 4.20
446 478 2.325583 TGAAATTTCGGATCGGAGGG 57.674 50.000 13.34 0.00 0.00 4.30
447 479 3.006940 TGTTGAAATTTCGGATCGGAGG 58.993 45.455 13.34 0.00 0.00 4.30
448 480 4.154195 ACTTGTTGAAATTTCGGATCGGAG 59.846 41.667 13.34 7.25 0.00 4.63
449 481 4.069304 ACTTGTTGAAATTTCGGATCGGA 58.931 39.130 13.34 0.00 0.00 4.55
450 482 4.083537 TCACTTGTTGAAATTTCGGATCGG 60.084 41.667 13.34 4.88 0.00 4.18
451 483 4.846137 GTCACTTGTTGAAATTTCGGATCG 59.154 41.667 13.34 4.71 35.39 3.69
452 484 6.002062 AGTCACTTGTTGAAATTTCGGATC 57.998 37.500 13.34 4.65 35.39 3.36
453 485 6.485313 TGTAGTCACTTGTTGAAATTTCGGAT 59.515 34.615 13.34 0.00 35.39 4.18
454 486 5.818336 TGTAGTCACTTGTTGAAATTTCGGA 59.182 36.000 13.34 2.07 35.39 4.55
455 487 6.055231 TGTAGTCACTTGTTGAAATTTCGG 57.945 37.500 13.34 4.09 35.39 4.30
456 488 7.474332 CGTATGTAGTCACTTGTTGAAATTTCG 59.526 37.037 13.34 1.45 35.39 3.46
457 489 8.492748 TCGTATGTAGTCACTTGTTGAAATTTC 58.507 33.333 11.41 11.41 35.39 2.17
458 490 8.373048 TCGTATGTAGTCACTTGTTGAAATTT 57.627 30.769 0.00 0.00 35.39 1.82
459 491 7.956420 TCGTATGTAGTCACTTGTTGAAATT 57.044 32.000 0.00 0.00 35.39 1.82
460 492 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
461 493 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
462 494 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
463 495 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
464 496 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
465 497 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
466 498 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
467 499 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
468 500 8.604035 CATATTTTGCTTCGTATGTAGTCACTT 58.396 33.333 0.00 0.00 0.00 3.16
469 501 7.764443 ACATATTTTGCTTCGTATGTAGTCACT 59.236 33.333 0.00 0.00 36.35 3.41
470 502 7.906160 ACATATTTTGCTTCGTATGTAGTCAC 58.094 34.615 0.00 0.00 36.35 3.67
471 503 7.979537 AGACATATTTTGCTTCGTATGTAGTCA 59.020 33.333 0.00 0.00 37.76 3.41
472 504 8.354011 AGACATATTTTGCTTCGTATGTAGTC 57.646 34.615 0.00 0.00 37.76 2.59
473 505 9.982651 ATAGACATATTTTGCTTCGTATGTAGT 57.017 29.630 0.00 0.00 37.76 2.73
483 515 9.944376 ACGGATGTATATAGACATATTTTGCTT 57.056 29.630 12.82 0.00 40.18 3.91
490 522 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
492 524 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
493 525 8.866970 TTACCACATACGGATGTATATAGACA 57.133 34.615 14.23 2.07 44.82 3.41
500 532 8.783093 CAAATGAATTACCACATACGGATGTAT 58.217 33.333 14.23 7.46 44.82 2.29
501 533 7.988028 TCAAATGAATTACCACATACGGATGTA 59.012 33.333 14.23 0.00 44.82 2.29
503 535 7.258022 TCAAATGAATTACCACATACGGATG 57.742 36.000 5.94 5.94 39.16 3.51
504 536 7.873719 TTCAAATGAATTACCACATACGGAT 57.126 32.000 0.00 0.00 0.00 4.18
505 537 7.689446 TTTCAAATGAATTACCACATACGGA 57.311 32.000 0.00 0.00 33.54 4.69
535 567 8.466798 CCTCCGTTCCTAAATATTTGTCATTTT 58.533 33.333 11.05 0.00 0.00 1.82
536 568 7.068226 CCCTCCGTTCCTAAATATTTGTCATTT 59.932 37.037 11.05 0.00 0.00 2.32
537 569 6.546034 CCCTCCGTTCCTAAATATTTGTCATT 59.454 38.462 11.05 0.00 0.00 2.57
538 570 6.062095 CCCTCCGTTCCTAAATATTTGTCAT 58.938 40.000 11.05 0.00 0.00 3.06
539 571 5.190132 TCCCTCCGTTCCTAAATATTTGTCA 59.810 40.000 11.05 0.00 0.00 3.58
540 572 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
541 573 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
542 574 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
543 575 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
544 576 6.785963 TCATACTCCCTCCGTTCCTAAATATT 59.214 38.462 0.00 0.00 0.00 1.28
545 577 6.320518 TCATACTCCCTCCGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
546 578 5.708544 TCATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
547 579 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
548 580 3.958798 CTCATACTCCCTCCGTTCCTAAA 59.041 47.826 0.00 0.00 0.00 1.85
549 581 3.203710 TCTCATACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
550 582 2.781757 TCTCATACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
551 583 1.569548 TCTCATACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
552 584 2.068834 TCTCATACTCCCTCCGTTCC 57.931 55.000 0.00 0.00 0.00 3.62
553 585 5.986501 AATATCTCATACTCCCTCCGTTC 57.013 43.478 0.00 0.00 0.00 3.95
554 586 5.839063 TCAAATATCTCATACTCCCTCCGTT 59.161 40.000 0.00 0.00 0.00 4.44
555 587 5.394738 TCAAATATCTCATACTCCCTCCGT 58.605 41.667 0.00 0.00 0.00 4.69
556 588 5.984695 TCAAATATCTCATACTCCCTCCG 57.015 43.478 0.00 0.00 0.00 4.63
557 589 7.684529 ACAATCAAATATCTCATACTCCCTCC 58.315 38.462 0.00 0.00 0.00 4.30
558 590 7.821846 GGACAATCAAATATCTCATACTCCCTC 59.178 40.741 0.00 0.00 0.00 4.30
559 591 7.293299 TGGACAATCAAATATCTCATACTCCCT 59.707 37.037 0.00 0.00 0.00 4.20
560 592 7.453393 TGGACAATCAAATATCTCATACTCCC 58.547 38.462 0.00 0.00 0.00 4.30
561 593 8.908786 TTGGACAATCAAATATCTCATACTCC 57.091 34.615 0.00 0.00 0.00 3.85
673 708 7.556275 CCTAGCTAGGGAGAGAGACATATAAAG 59.444 44.444 29.47 0.00 39.86 1.85
675 710 6.964464 CCTAGCTAGGGAGAGAGACATATAA 58.036 44.000 29.47 0.00 39.86 0.98
709 744 0.121197 AGAGAGGGGTTTGGGGATCA 59.879 55.000 0.00 0.00 0.00 2.92
736 771 2.086869 AGAAAGGGAATGTGCATGTCG 58.913 47.619 0.00 0.00 0.00 4.35
738 773 3.159213 TGAGAAAGGGAATGTGCATGT 57.841 42.857 0.00 0.00 0.00 3.21
750 785 3.815401 CACTAGTGTGGGTTTGAGAAAGG 59.185 47.826 15.06 0.00 40.33 3.11
754 789 4.504864 CCATTCACTAGTGTGGGTTTGAGA 60.505 45.833 21.99 0.00 43.94 3.27
762 797 1.740380 CGCCTCCATTCACTAGTGTGG 60.740 57.143 21.99 21.56 43.94 4.17
769 804 1.399744 TATCCGCGCCTCCATTCACT 61.400 55.000 0.00 0.00 0.00 3.41
775 810 1.441729 CTTTCTATCCGCGCCTCCA 59.558 57.895 0.00 0.00 0.00 3.86
776 811 1.301009 CCTTTCTATCCGCGCCTCC 60.301 63.158 0.00 0.00 0.00 4.30
783 818 1.367840 CGAGGCCCCTTTCTATCCG 59.632 63.158 0.00 0.00 0.00 4.18
786 821 2.715763 TATCCGAGGCCCCTTTCTAT 57.284 50.000 0.00 0.00 0.00 1.98
793 828 1.069258 CGTTCTTATCCGAGGCCCC 59.931 63.158 0.00 0.00 0.00 5.80
797 832 2.671396 CACAAACCGTTCTTATCCGAGG 59.329 50.000 0.00 0.00 0.00 4.63
805 840 2.681344 GGACTGTTCACAAACCGTTCTT 59.319 45.455 0.00 0.00 33.58 2.52
807 842 1.004292 CGGACTGTTCACAAACCGTTC 60.004 52.381 13.15 0.00 38.68 3.95
811 846 1.652563 GGCGGACTGTTCACAAACC 59.347 57.895 0.00 0.00 34.28 3.27
870 905 0.608130 TGGTTCCAGGTCGATGTCTG 59.392 55.000 0.00 0.00 0.00 3.51
886 921 4.657824 CTCCGTTGGACGCGTGGT 62.658 66.667 20.70 0.00 40.91 4.16
1009 1044 1.674221 GCTGGGCTTGTGAGTACTCAG 60.674 57.143 25.81 15.21 40.75 3.35
1010 1045 0.321671 GCTGGGCTTGTGAGTACTCA 59.678 55.000 21.74 21.74 37.24 3.41
1011 1046 0.321671 TGCTGGGCTTGTGAGTACTC 59.678 55.000 16.32 16.32 0.00 2.59
1012 1047 0.764890 TTGCTGGGCTTGTGAGTACT 59.235 50.000 0.00 0.00 0.00 2.73
1013 1048 1.160137 CTTGCTGGGCTTGTGAGTAC 58.840 55.000 0.00 0.00 0.00 2.73
1043 1078 2.557056 CTGGCTGGCTGGATTATGATTG 59.443 50.000 2.00 0.00 0.00 2.67
1044 1079 2.872732 CTGGCTGGCTGGATTATGATT 58.127 47.619 2.00 0.00 0.00 2.57
1045 1080 1.547223 GCTGGCTGGCTGGATTATGAT 60.547 52.381 9.98 0.00 0.00 2.45
1220 1262 1.296715 GGTGGCGTGTCTCCTTGAT 59.703 57.895 0.00 0.00 0.00 2.57
1882 1952 4.963953 CACGGAGCGCTTTTTCATAATAAG 59.036 41.667 13.26 0.00 0.00 1.73
1888 1958 1.586154 CCCACGGAGCGCTTTTTCAT 61.586 55.000 13.26 0.00 0.00 2.57
1930 2000 6.130298 TGTTCCGTGATTTTATTATGCTGG 57.870 37.500 0.00 0.00 0.00 4.85
1985 2056 8.250143 TGTCCATCTATGTCAAGTATATGTGT 57.750 34.615 0.00 0.00 0.00 3.72
1986 2057 9.201127 CTTGTCCATCTATGTCAAGTATATGTG 57.799 37.037 12.73 0.00 35.34 3.21
2020 2091 6.426937 TCTTTTTAGGAGAATGAAGAACCGTG 59.573 38.462 0.00 0.00 0.00 4.94
2049 2120 1.652124 CATGTCTTTCGCTTTGCATGC 59.348 47.619 11.82 11.82 0.00 4.06
2052 2123 1.603456 TCCATGTCTTTCGCTTTGCA 58.397 45.000 0.00 0.00 0.00 4.08
2080 2154 3.439129 CACCTACTTCCGGACCATTTTTC 59.561 47.826 1.83 0.00 0.00 2.29
2081 2155 3.418047 CACCTACTTCCGGACCATTTTT 58.582 45.455 1.83 0.00 0.00 1.94
2133 2207 2.236146 TGCTGTTATGGAACGGATCTGT 59.764 45.455 0.00 0.00 43.64 3.41
2141 2237 7.495934 AGTGTATATTCTGTGCTGTTATGGAAC 59.504 37.037 0.00 0.00 36.00 3.62
2178 2274 8.703336 CGATAGCGATGATTTCTAAAATGAGAA 58.297 33.333 0.00 0.00 40.82 2.87
2223 2363 4.643387 ACCCACCCACTGAAGCGC 62.643 66.667 0.00 0.00 0.00 5.92
2224 2364 2.358737 GACCCACCCACTGAAGCG 60.359 66.667 0.00 0.00 0.00 4.68
2226 2366 1.301716 CGTGACCCACCCACTGAAG 60.302 63.158 0.00 0.00 32.64 3.02
2227 2367 2.825982 CGTGACCCACCCACTGAA 59.174 61.111 0.00 0.00 32.64 3.02
2228 2368 3.936203 GCGTGACCCACCCACTGA 61.936 66.667 0.00 0.00 32.64 3.41
2269 2413 1.295792 AACGCGCTCACTCAGAAAAA 58.704 45.000 5.73 0.00 0.00 1.94
2270 2414 1.295792 AAACGCGCTCACTCAGAAAA 58.704 45.000 5.73 0.00 0.00 2.29
2271 2415 1.295792 AAAACGCGCTCACTCAGAAA 58.704 45.000 5.73 0.00 0.00 2.52
2273 2417 2.986311 AAAAACGCGCTCACTCAGA 58.014 47.368 5.73 0.00 0.00 3.27
2291 2435 6.706270 ACTCGCTCACTCAGAAATTCTAAAAA 59.294 34.615 0.00 0.00 0.00 1.94
2292 2436 6.146184 CACTCGCTCACTCAGAAATTCTAAAA 59.854 38.462 0.00 0.00 0.00 1.52
2293 2437 5.635280 CACTCGCTCACTCAGAAATTCTAAA 59.365 40.000 0.00 0.00 0.00 1.85
2294 2438 5.164233 CACTCGCTCACTCAGAAATTCTAA 58.836 41.667 0.00 0.00 0.00 2.10
2295 2439 4.380973 CCACTCGCTCACTCAGAAATTCTA 60.381 45.833 0.00 0.00 0.00 2.10
2296 2440 3.583806 CACTCGCTCACTCAGAAATTCT 58.416 45.455 0.00 0.00 0.00 2.40
2297 2441 2.670414 CCACTCGCTCACTCAGAAATTC 59.330 50.000 0.00 0.00 0.00 2.17
2298 2442 2.037772 ACCACTCGCTCACTCAGAAATT 59.962 45.455 0.00 0.00 0.00 1.82
2299 2443 1.620819 ACCACTCGCTCACTCAGAAAT 59.379 47.619 0.00 0.00 0.00 2.17
2300 2444 1.040646 ACCACTCGCTCACTCAGAAA 58.959 50.000 0.00 0.00 0.00 2.52
2301 2445 1.540267 GTACCACTCGCTCACTCAGAA 59.460 52.381 0.00 0.00 0.00 3.02
2302 2446 1.166129 GTACCACTCGCTCACTCAGA 58.834 55.000 0.00 0.00 0.00 3.27
2303 2447 0.179187 CGTACCACTCGCTCACTCAG 60.179 60.000 0.00 0.00 0.00 3.35
2304 2448 1.583495 CCGTACCACTCGCTCACTCA 61.583 60.000 0.00 0.00 0.00 3.41
2305 2449 1.136984 CCGTACCACTCGCTCACTC 59.863 63.158 0.00 0.00 0.00 3.51
2306 2450 0.321919 TACCGTACCACTCGCTCACT 60.322 55.000 0.00 0.00 0.00 3.41
2307 2451 0.737219 ATACCGTACCACTCGCTCAC 59.263 55.000 0.00 0.00 0.00 3.51
2308 2452 0.736636 CATACCGTACCACTCGCTCA 59.263 55.000 0.00 0.00 0.00 4.26
2309 2453 0.594284 GCATACCGTACCACTCGCTC 60.594 60.000 0.00 0.00 0.00 5.03
2310 2454 1.436336 GCATACCGTACCACTCGCT 59.564 57.895 0.00 0.00 0.00 4.93
2311 2455 1.590792 GGCATACCGTACCACTCGC 60.591 63.158 0.00 0.00 0.00 5.03
2312 2456 1.811195 TGGCATACCGTACCACTCG 59.189 57.895 0.00 0.00 39.70 4.18
2328 2472 1.690219 ATTGCCCTCTAGGAGCGTGG 61.690 60.000 0.00 0.00 38.24 4.94
2329 2473 0.531532 CATTGCCCTCTAGGAGCGTG 60.532 60.000 0.00 0.14 38.24 5.34
2330 2474 1.690219 CCATTGCCCTCTAGGAGCGT 61.690 60.000 0.00 0.00 38.24 5.07
2332 2476 0.107643 GTCCATTGCCCTCTAGGAGC 59.892 60.000 0.00 0.17 38.24 4.70
2334 2478 0.044092 TGGTCCATTGCCCTCTAGGA 59.956 55.000 0.00 0.00 38.24 2.94
2336 2480 0.911769 TGTGGTCCATTGCCCTCTAG 59.088 55.000 0.00 0.00 0.00 2.43
2343 2677 1.617850 TGGAATGTTGTGGTCCATTGC 59.382 47.619 0.00 0.00 39.14 3.56
2349 2683 4.701651 TCATCATCTTGGAATGTTGTGGTC 59.298 41.667 0.00 0.00 31.31 4.02
2350 2684 4.665451 TCATCATCTTGGAATGTTGTGGT 58.335 39.130 0.00 0.00 31.31 4.16
2351 2685 5.847111 ATCATCATCTTGGAATGTTGTGG 57.153 39.130 0.00 0.00 31.31 4.17
2419 2753 3.924144 ACAACAGCTGCTGAAACAAAAA 58.076 36.364 34.28 0.00 35.18 1.94
2420 2754 3.510719 GACAACAGCTGCTGAAACAAAA 58.489 40.909 34.28 0.00 35.18 2.44
2421 2755 2.159254 GGACAACAGCTGCTGAAACAAA 60.159 45.455 34.28 0.00 35.18 2.83
2422 2756 1.405105 GGACAACAGCTGCTGAAACAA 59.595 47.619 34.28 0.00 35.18 2.83
2423 2757 1.024271 GGACAACAGCTGCTGAAACA 58.976 50.000 34.28 0.00 35.18 2.83
2424 2758 0.040958 CGGACAACAGCTGCTGAAAC 60.041 55.000 34.28 20.33 35.18 2.78
2425 2759 0.463654 ACGGACAACAGCTGCTGAAA 60.464 50.000 34.28 0.00 35.18 2.69
2426 2760 0.880278 GACGGACAACAGCTGCTGAA 60.880 55.000 34.28 0.00 35.18 3.02
2427 2761 1.300931 GACGGACAACAGCTGCTGA 60.301 57.895 34.28 0.00 35.18 4.26
2428 2762 2.661566 CGACGGACAACAGCTGCTG 61.662 63.158 27.02 27.02 37.52 4.41
2429 2763 2.356313 CGACGGACAACAGCTGCT 60.356 61.111 15.27 0.00 0.00 4.24
2430 2764 2.355837 TCGACGGACAACAGCTGC 60.356 61.111 15.27 0.00 0.00 5.25
2431 2765 2.365068 CGTCGACGGACAACAGCTG 61.365 63.158 29.70 13.48 43.61 4.24
2432 2766 2.050351 CGTCGACGGACAACAGCT 60.050 61.111 29.70 0.00 43.61 4.24
2433 2767 3.764049 GCGTCGACGGACAACAGC 61.764 66.667 36.13 15.44 43.61 4.40
2434 2768 1.606350 GAAGCGTCGACGGACAACAG 61.606 60.000 36.13 9.21 43.61 3.16
2435 2769 1.659335 GAAGCGTCGACGGACAACA 60.659 57.895 36.13 0.00 43.61 3.33
2436 2770 3.144605 GAAGCGTCGACGGACAAC 58.855 61.111 36.13 20.60 43.61 3.32
2466 2800 0.036875 CACAGAAGAACTCCACCCCC 59.963 60.000 0.00 0.00 0.00 5.40
2467 2801 0.606673 GCACAGAAGAACTCCACCCC 60.607 60.000 0.00 0.00 0.00 4.95
2468 2802 0.606673 GGCACAGAAGAACTCCACCC 60.607 60.000 0.00 0.00 0.00 4.61
2469 2803 0.398318 AGGCACAGAAGAACTCCACC 59.602 55.000 0.00 0.00 0.00 4.61
2470 2804 1.876156 CAAGGCACAGAAGAACTCCAC 59.124 52.381 0.00 0.00 0.00 4.02
2471 2805 1.202806 CCAAGGCACAGAAGAACTCCA 60.203 52.381 0.00 0.00 0.00 3.86
2472 2806 1.528129 CCAAGGCACAGAAGAACTCC 58.472 55.000 0.00 0.00 0.00 3.85
2473 2807 1.528129 CCCAAGGCACAGAAGAACTC 58.472 55.000 0.00 0.00 0.00 3.01
2474 2808 0.111253 CCCCAAGGCACAGAAGAACT 59.889 55.000 0.00 0.00 0.00 3.01
2475 2809 0.895559 CCCCCAAGGCACAGAAGAAC 60.896 60.000 0.00 0.00 0.00 3.01
2476 2810 1.460255 CCCCCAAGGCACAGAAGAA 59.540 57.895 0.00 0.00 0.00 2.52
2477 2811 3.170362 CCCCCAAGGCACAGAAGA 58.830 61.111 0.00 0.00 0.00 2.87
2491 2825 2.359967 CCTCGAGAACTCCACCCCC 61.360 68.421 15.71 0.00 0.00 5.40
2492 2826 1.305046 TCCTCGAGAACTCCACCCC 60.305 63.158 15.71 0.00 0.00 4.95
2493 2827 0.612453 ACTCCTCGAGAACTCCACCC 60.612 60.000 15.71 0.00 33.32 4.61
2494 2828 2.018515 CTACTCCTCGAGAACTCCACC 58.981 57.143 15.71 0.00 33.32 4.61
2495 2829 2.940410 CTCTACTCCTCGAGAACTCCAC 59.060 54.545 15.71 0.00 33.32 4.02
2496 2830 2.092861 CCTCTACTCCTCGAGAACTCCA 60.093 54.545 15.71 0.00 33.32 3.86
2497 2831 2.171027 TCCTCTACTCCTCGAGAACTCC 59.829 54.545 15.71 0.00 33.32 3.85
2498 2832 3.463944 CTCCTCTACTCCTCGAGAACTC 58.536 54.545 15.71 0.00 33.32 3.01
2499 2833 2.171870 CCTCCTCTACTCCTCGAGAACT 59.828 54.545 15.71 0.00 33.32 3.01
2500 2834 2.092807 ACCTCCTCTACTCCTCGAGAAC 60.093 54.545 15.71 0.00 33.32 3.01
2501 2835 2.092861 CACCTCCTCTACTCCTCGAGAA 60.093 54.545 15.71 0.00 33.32 2.87
2502 2836 1.487142 CACCTCCTCTACTCCTCGAGA 59.513 57.143 15.71 0.00 33.32 4.04
2503 2837 1.487142 TCACCTCCTCTACTCCTCGAG 59.513 57.143 5.13 5.13 35.52 4.04
2504 2838 1.487142 CTCACCTCCTCTACTCCTCGA 59.513 57.143 0.00 0.00 0.00 4.04
2505 2839 1.476110 CCTCACCTCCTCTACTCCTCG 60.476 61.905 0.00 0.00 0.00 4.63
2506 2840 1.567175 ACCTCACCTCCTCTACTCCTC 59.433 57.143 0.00 0.00 0.00 3.71
2507 2841 1.688750 ACCTCACCTCCTCTACTCCT 58.311 55.000 0.00 0.00 0.00 3.69
2508 2842 2.535836 AACCTCACCTCCTCTACTCC 57.464 55.000 0.00 0.00 0.00 3.85
2509 2843 4.570930 CAAAAACCTCACCTCCTCTACTC 58.429 47.826 0.00 0.00 0.00 2.59
2510 2844 3.244596 GCAAAAACCTCACCTCCTCTACT 60.245 47.826 0.00 0.00 0.00 2.57
2511 2845 3.075148 GCAAAAACCTCACCTCCTCTAC 58.925 50.000 0.00 0.00 0.00 2.59
2512 2846 2.039879 GGCAAAAACCTCACCTCCTCTA 59.960 50.000 0.00 0.00 0.00 2.43
2513 2847 1.202940 GGCAAAAACCTCACCTCCTCT 60.203 52.381 0.00 0.00 0.00 3.69
2514 2848 1.248486 GGCAAAAACCTCACCTCCTC 58.752 55.000 0.00 0.00 0.00 3.71
2515 2849 0.178961 GGGCAAAAACCTCACCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
2516 2850 1.185618 GGGGCAAAAACCTCACCTCC 61.186 60.000 0.00 0.00 0.00 4.30
2517 2851 0.469144 TGGGGCAAAAACCTCACCTC 60.469 55.000 0.00 0.00 34.34 3.85
2518 2852 0.031616 TTGGGGCAAAAACCTCACCT 60.032 50.000 0.00 0.00 40.96 4.00
2519 2853 0.105964 GTTGGGGCAAAAACCTCACC 59.894 55.000 0.00 0.00 40.96 4.02
2520 2854 1.119684 AGTTGGGGCAAAAACCTCAC 58.880 50.000 0.00 0.00 40.96 3.51
2521 2855 2.593026 CTAGTTGGGGCAAAAACCTCA 58.407 47.619 0.00 0.00 38.89 3.86
2522 2856 1.272490 GCTAGTTGGGGCAAAAACCTC 59.728 52.381 0.00 0.00 0.00 3.85
2523 2857 1.338107 GCTAGTTGGGGCAAAAACCT 58.662 50.000 0.00 0.00 0.00 3.50
2524 2858 1.044611 TGCTAGTTGGGGCAAAAACC 58.955 50.000 0.00 0.00 35.40 3.27
2525 2859 2.900716 TTGCTAGTTGGGGCAAAAAC 57.099 45.000 0.00 0.00 44.01 2.43
2530 2864 1.691196 GCATATTGCTAGTTGGGGCA 58.309 50.000 0.00 0.00 40.96 5.36
2531 2865 0.961753 GGCATATTGCTAGTTGGGGC 59.038 55.000 0.00 0.00 44.28 5.80
2532 2866 1.133513 TGGGCATATTGCTAGTTGGGG 60.134 52.381 0.00 0.00 44.28 4.96
2533 2867 2.363306 TGGGCATATTGCTAGTTGGG 57.637 50.000 0.00 0.00 44.28 4.12
2534 2868 2.029649 GCATGGGCATATTGCTAGTTGG 60.030 50.000 0.00 0.00 44.28 3.77
2535 2869 2.351060 CGCATGGGCATATTGCTAGTTG 60.351 50.000 0.00 0.00 44.28 3.16
2536 2870 1.881973 CGCATGGGCATATTGCTAGTT 59.118 47.619 0.00 0.00 44.28 2.24
2537 2871 1.202806 ACGCATGGGCATATTGCTAGT 60.203 47.619 10.10 0.00 44.28 2.57
2538 2872 1.527034 ACGCATGGGCATATTGCTAG 58.473 50.000 10.10 0.00 44.28 3.42
2539 2873 1.608109 CAACGCATGGGCATATTGCTA 59.392 47.619 10.10 0.00 44.28 3.49
2540 2874 0.386476 CAACGCATGGGCATATTGCT 59.614 50.000 10.10 0.00 44.28 3.91
2541 2875 0.102844 ACAACGCATGGGCATATTGC 59.897 50.000 10.10 0.00 44.08 3.56
2542 2876 2.601979 CGTACAACGCATGGGCATATTG 60.602 50.000 10.10 9.24 41.24 1.90
2543 2877 1.601903 CGTACAACGCATGGGCATATT 59.398 47.619 10.10 0.00 41.24 1.28
2544 2878 1.225855 CGTACAACGCATGGGCATAT 58.774 50.000 10.10 0.00 41.24 1.78
2545 2879 0.812014 CCGTACAACGCATGGGCATA 60.812 55.000 10.10 0.00 40.91 3.14
2546 2880 2.112198 CCGTACAACGCATGGGCAT 61.112 57.895 10.10 0.00 40.91 4.40
2547 2881 2.744318 CCGTACAACGCATGGGCA 60.744 61.111 10.10 0.00 40.91 5.36
2548 2882 2.435234 TCCGTACAACGCATGGGC 60.435 61.111 10.10 0.00 40.91 5.36
2549 2883 2.461110 GCTCCGTACAACGCATGGG 61.461 63.158 8.44 8.44 40.91 4.00
2550 2884 1.089481 ATGCTCCGTACAACGCATGG 61.089 55.000 10.74 0.00 41.17 3.66
2551 2885 0.301687 GATGCTCCGTACAACGCATG 59.698 55.000 14.93 0.00 42.60 4.06
2552 2886 0.108377 TGATGCTCCGTACAACGCAT 60.108 50.000 11.19 11.19 44.97 4.73
2553 2887 0.319986 TTGATGCTCCGTACAACGCA 60.320 50.000 2.95 2.95 40.91 5.24
2554 2888 0.370273 CTTGATGCTCCGTACAACGC 59.630 55.000 0.00 0.00 40.91 4.84
2555 2889 1.990799 TCTTGATGCTCCGTACAACG 58.009 50.000 0.00 0.00 42.11 4.10
2556 2890 2.030946 GCATCTTGATGCTCCGTACAAC 59.969 50.000 23.56 0.00 43.79 3.32
2557 2891 2.279741 GCATCTTGATGCTCCGTACAA 58.720 47.619 23.56 0.00 43.79 2.41
2558 2892 1.939974 GCATCTTGATGCTCCGTACA 58.060 50.000 23.56 0.00 43.79 2.90
2567 2901 8.151141 ACTACTCATACAAATGCATCTTGATG 57.849 34.615 20.96 18.39 32.76 3.07
2568 2902 8.743085 AACTACTCATACAAATGCATCTTGAT 57.257 30.769 20.96 11.48 32.76 2.57
2569 2903 8.565896 AAACTACTCATACAAATGCATCTTGA 57.434 30.769 20.96 10.81 32.76 3.02
2579 2913 9.575868 TCCCACAAAATAAACTACTCATACAAA 57.424 29.630 0.00 0.00 0.00 2.83
2580 2914 9.226606 CTCCCACAAAATAAACTACTCATACAA 57.773 33.333 0.00 0.00 0.00 2.41
2581 2915 8.598916 TCTCCCACAAAATAAACTACTCATACA 58.401 33.333 0.00 0.00 0.00 2.29
2582 2916 9.444600 TTCTCCCACAAAATAAACTACTCATAC 57.555 33.333 0.00 0.00 0.00 2.39
2584 2918 8.934023 TTTCTCCCACAAAATAAACTACTCAT 57.066 30.769 0.00 0.00 0.00 2.90
2585 2919 8.754991 TTTTCTCCCACAAAATAAACTACTCA 57.245 30.769 0.00 0.00 0.00 3.41
2586 2920 9.626045 CATTTTCTCCCACAAAATAAACTACTC 57.374 33.333 0.00 0.00 32.74 2.59
2587 2921 9.362151 TCATTTTCTCCCACAAAATAAACTACT 57.638 29.630 0.00 0.00 32.74 2.57
2590 2924 8.869109 TCATCATTTTCTCCCACAAAATAAACT 58.131 29.630 0.00 0.00 32.74 2.66
2591 2925 9.487790 TTCATCATTTTCTCCCACAAAATAAAC 57.512 29.630 0.00 0.00 32.74 2.01
2592 2926 9.487790 GTTCATCATTTTCTCCCACAAAATAAA 57.512 29.630 0.00 0.00 32.74 1.40
2593 2927 7.812191 CGTTCATCATTTTCTCCCACAAAATAA 59.188 33.333 0.00 0.00 32.74 1.40
2594 2928 7.175816 TCGTTCATCATTTTCTCCCACAAAATA 59.824 33.333 0.00 0.00 32.74 1.40
2595 2929 6.015519 TCGTTCATCATTTTCTCCCACAAAAT 60.016 34.615 0.00 0.00 34.42 1.82
2596 2930 5.300539 TCGTTCATCATTTTCTCCCACAAAA 59.699 36.000 0.00 0.00 0.00 2.44
2597 2931 4.824537 TCGTTCATCATTTTCTCCCACAAA 59.175 37.500 0.00 0.00 0.00 2.83
2598 2932 4.393834 TCGTTCATCATTTTCTCCCACAA 58.606 39.130 0.00 0.00 0.00 3.33
2599 2933 4.002982 CTCGTTCATCATTTTCTCCCACA 58.997 43.478 0.00 0.00 0.00 4.17
2600 2934 3.375299 CCTCGTTCATCATTTTCTCCCAC 59.625 47.826 0.00 0.00 0.00 4.61
2601 2935 3.609853 CCTCGTTCATCATTTTCTCCCA 58.390 45.455 0.00 0.00 0.00 4.37
2602 2936 2.945668 CCCTCGTTCATCATTTTCTCCC 59.054 50.000 0.00 0.00 0.00 4.30
2603 2937 3.873910 TCCCTCGTTCATCATTTTCTCC 58.126 45.455 0.00 0.00 0.00 3.71
2604 2938 5.064071 GTCTTCCCTCGTTCATCATTTTCTC 59.936 44.000 0.00 0.00 0.00 2.87
2605 2939 4.938226 GTCTTCCCTCGTTCATCATTTTCT 59.062 41.667 0.00 0.00 0.00 2.52
2606 2940 4.095036 GGTCTTCCCTCGTTCATCATTTTC 59.905 45.833 0.00 0.00 0.00 2.29
2607 2941 4.010349 GGTCTTCCCTCGTTCATCATTTT 58.990 43.478 0.00 0.00 0.00 1.82
2608 2942 3.264450 AGGTCTTCCCTCGTTCATCATTT 59.736 43.478 0.00 0.00 40.71 2.32
2609 2943 2.840651 AGGTCTTCCCTCGTTCATCATT 59.159 45.455 0.00 0.00 40.71 2.57
2610 2944 2.472029 AGGTCTTCCCTCGTTCATCAT 58.528 47.619 0.00 0.00 40.71 2.45
2611 2945 1.938585 AGGTCTTCCCTCGTTCATCA 58.061 50.000 0.00 0.00 40.71 3.07
2612 2946 4.674281 ATAAGGTCTTCCCTCGTTCATC 57.326 45.455 0.00 0.00 45.47 2.92
2613 2947 5.186198 CAAATAAGGTCTTCCCTCGTTCAT 58.814 41.667 0.00 0.00 45.47 2.57
2614 2948 4.575885 CAAATAAGGTCTTCCCTCGTTCA 58.424 43.478 0.00 0.00 45.47 3.18
2615 2949 3.374367 GCAAATAAGGTCTTCCCTCGTTC 59.626 47.826 0.00 0.00 45.47 3.95
2616 2950 3.244770 TGCAAATAAGGTCTTCCCTCGTT 60.245 43.478 0.00 0.00 45.47 3.85
2617 2951 2.304761 TGCAAATAAGGTCTTCCCTCGT 59.695 45.455 0.00 0.00 45.47 4.18
2618 2952 2.985896 TGCAAATAAGGTCTTCCCTCG 58.014 47.619 0.00 0.00 45.47 4.63
2619 2953 6.016777 CACATATGCAAATAAGGTCTTCCCTC 60.017 42.308 1.58 0.00 45.47 4.30
2621 2955 6.076981 CACATATGCAAATAAGGTCTTCCC 57.923 41.667 1.58 0.00 0.00 3.97
2637 2971 1.671979 CACACCCCTCTGCACATATG 58.328 55.000 0.00 0.00 0.00 1.78
2638 2972 0.548031 CCACACCCCTCTGCACATAT 59.452 55.000 0.00 0.00 0.00 1.78
2639 2973 0.546507 TCCACACCCCTCTGCACATA 60.547 55.000 0.00 0.00 0.00 2.29
2640 2974 1.210204 ATCCACACCCCTCTGCACAT 61.210 55.000 0.00 0.00 0.00 3.21
2641 2975 0.546507 TATCCACACCCCTCTGCACA 60.547 55.000 0.00 0.00 0.00 4.57
2642 2976 0.839946 ATATCCACACCCCTCTGCAC 59.160 55.000 0.00 0.00 0.00 4.57
2643 2977 1.131638 GATATCCACACCCCTCTGCA 58.868 55.000 0.00 0.00 0.00 4.41
2644 2978 1.428869 AGATATCCACACCCCTCTGC 58.571 55.000 0.00 0.00 0.00 4.26
2645 2979 4.510167 AAAAGATATCCACACCCCTCTG 57.490 45.455 0.00 0.00 0.00 3.35
2646 2980 5.491078 TGTAAAAAGATATCCACACCCCTCT 59.509 40.000 0.00 0.00 0.00 3.69
2647 2981 5.751586 TGTAAAAAGATATCCACACCCCTC 58.248 41.667 0.00 0.00 0.00 4.30
2648 2982 5.789574 TGTAAAAAGATATCCACACCCCT 57.210 39.130 0.00 0.00 0.00 4.79
2649 2983 6.844097 TTTGTAAAAAGATATCCACACCCC 57.156 37.500 0.00 0.00 0.00 4.95
2650 2984 9.150348 CAATTTTGTAAAAAGATATCCACACCC 57.850 33.333 0.00 0.00 0.00 4.61
2651 2985 9.705290 ACAATTTTGTAAAAAGATATCCACACC 57.295 29.630 0.00 0.00 40.16 4.16
2671 3005 8.840321 CGGATATGAAGGAAACTATGACAATTT 58.160 33.333 0.00 0.00 42.68 1.82
2672 3006 7.993183 ACGGATATGAAGGAAACTATGACAATT 59.007 33.333 0.00 0.00 42.68 2.32
2673 3007 7.509546 ACGGATATGAAGGAAACTATGACAAT 58.490 34.615 0.00 0.00 42.68 2.71
2674 3008 6.884832 ACGGATATGAAGGAAACTATGACAA 58.115 36.000 0.00 0.00 42.68 3.18
2675 3009 6.097696 TGACGGATATGAAGGAAACTATGACA 59.902 38.462 0.00 0.00 42.68 3.58
2676 3010 6.513180 TGACGGATATGAAGGAAACTATGAC 58.487 40.000 0.00 0.00 42.68 3.06
2677 3011 6.549736 TCTGACGGATATGAAGGAAACTATGA 59.450 38.462 0.00 0.00 42.68 2.15
2678 3012 6.749139 TCTGACGGATATGAAGGAAACTATG 58.251 40.000 0.00 0.00 42.68 2.23
2679 3013 6.978674 TCTGACGGATATGAAGGAAACTAT 57.021 37.500 0.00 0.00 42.68 2.12
2680 3014 6.978674 ATCTGACGGATATGAAGGAAACTA 57.021 37.500 0.00 0.00 33.70 2.24
2681 3015 5.878406 ATCTGACGGATATGAAGGAAACT 57.122 39.130 0.00 0.00 35.69 2.66
2682 3016 9.706691 TTTATATCTGACGGATATGAAGGAAAC 57.293 33.333 22.16 0.00 44.61 2.78
2685 3019 8.406297 CGATTTATATCTGACGGATATGAAGGA 58.594 37.037 22.16 3.87 44.61 3.36
2686 3020 7.649705 CCGATTTATATCTGACGGATATGAAGG 59.350 40.741 22.16 15.61 44.61 3.46
2687 3021 8.406297 TCCGATTTATATCTGACGGATATGAAG 58.594 37.037 22.16 11.78 44.61 3.02
2688 3022 8.288689 TCCGATTTATATCTGACGGATATGAA 57.711 34.615 22.16 20.34 44.61 2.57
2689 3023 7.875327 TCCGATTTATATCTGACGGATATGA 57.125 36.000 22.16 14.02 44.61 2.15
2697 3031 5.373981 AGACCGTCCGATTTATATCTGAC 57.626 43.478 7.39 7.39 39.96 3.51
2698 3032 8.975663 ATATAGACCGTCCGATTTATATCTGA 57.024 34.615 0.00 0.00 0.00 3.27
2699 3033 9.452065 CAATATAGACCGTCCGATTTATATCTG 57.548 37.037 0.00 0.00 0.00 2.90
2700 3034 8.136165 GCAATATAGACCGTCCGATTTATATCT 58.864 37.037 0.00 0.00 0.00 1.98
2701 3035 7.919091 TGCAATATAGACCGTCCGATTTATATC 59.081 37.037 0.00 0.00 0.00 1.63
2702 3036 7.778083 TGCAATATAGACCGTCCGATTTATAT 58.222 34.615 0.00 0.00 0.00 0.86
2703 3037 7.160547 TGCAATATAGACCGTCCGATTTATA 57.839 36.000 0.00 0.00 0.00 0.98
2704 3038 6.032956 TGCAATATAGACCGTCCGATTTAT 57.967 37.500 0.00 0.00 0.00 1.40
2705 3039 5.456548 TGCAATATAGACCGTCCGATTTA 57.543 39.130 0.00 0.00 0.00 1.40
2706 3040 4.307432 CTGCAATATAGACCGTCCGATTT 58.693 43.478 0.00 0.00 0.00 2.17
2707 3041 3.306088 CCTGCAATATAGACCGTCCGATT 60.306 47.826 0.00 0.00 0.00 3.34
2708 3042 2.231478 CCTGCAATATAGACCGTCCGAT 59.769 50.000 0.00 0.00 0.00 4.18
2709 3043 1.611977 CCTGCAATATAGACCGTCCGA 59.388 52.381 0.00 0.00 0.00 4.55
2710 3044 1.611977 TCCTGCAATATAGACCGTCCG 59.388 52.381 0.00 0.00 0.00 4.79
2711 3045 3.589988 CATCCTGCAATATAGACCGTCC 58.410 50.000 0.00 0.00 0.00 4.79
2712 3046 3.589988 CCATCCTGCAATATAGACCGTC 58.410 50.000 0.00 0.00 0.00 4.79
2713 3047 2.289694 GCCATCCTGCAATATAGACCGT 60.290 50.000 0.00 0.00 0.00 4.83
2714 3048 2.289631 TGCCATCCTGCAATATAGACCG 60.290 50.000 0.00 0.00 38.56 4.79
2715 3049 3.341823 CTGCCATCCTGCAATATAGACC 58.658 50.000 0.00 0.00 41.51 3.85
2716 3050 3.341823 CCTGCCATCCTGCAATATAGAC 58.658 50.000 0.00 0.00 41.51 2.59
2717 3051 2.290514 GCCTGCCATCCTGCAATATAGA 60.291 50.000 0.00 0.00 41.51 1.98
2718 3052 2.089980 GCCTGCCATCCTGCAATATAG 58.910 52.381 0.00 0.00 41.51 1.31
2719 3053 1.424684 TGCCTGCCATCCTGCAATATA 59.575 47.619 0.00 0.00 41.51 0.86
2720 3054 0.186630 TGCCTGCCATCCTGCAATAT 59.813 50.000 0.00 0.00 41.51 1.28
2721 3055 0.752743 GTGCCTGCCATCCTGCAATA 60.753 55.000 0.00 0.00 41.51 1.90
2722 3056 2.056223 GTGCCTGCCATCCTGCAAT 61.056 57.895 0.00 0.00 41.51 3.56
2723 3057 2.677524 GTGCCTGCCATCCTGCAA 60.678 61.111 0.00 0.00 41.51 4.08
2724 3058 3.969119 TGTGCCTGCCATCCTGCA 61.969 61.111 0.00 0.00 39.37 4.41
2725 3059 3.446570 GTGTGCCTGCCATCCTGC 61.447 66.667 0.00 0.00 0.00 4.85
2726 3060 0.968901 ATTGTGTGCCTGCCATCCTG 60.969 55.000 0.00 0.00 0.00 3.86
2727 3061 0.682209 GATTGTGTGCCTGCCATCCT 60.682 55.000 0.00 0.00 0.00 3.24
2728 3062 0.966875 TGATTGTGTGCCTGCCATCC 60.967 55.000 0.00 0.00 0.00 3.51
2729 3063 1.066605 GATGATTGTGTGCCTGCCATC 59.933 52.381 0.00 0.00 0.00 3.51
2730 3064 1.108776 GATGATTGTGTGCCTGCCAT 58.891 50.000 0.00 0.00 0.00 4.40
2731 3065 0.251253 TGATGATTGTGTGCCTGCCA 60.251 50.000 0.00 0.00 0.00 4.92
2732 3066 0.171903 GTGATGATTGTGTGCCTGCC 59.828 55.000 0.00 0.00 0.00 4.85
2733 3067 0.171903 GGTGATGATTGTGTGCCTGC 59.828 55.000 0.00 0.00 0.00 4.85
2734 3068 1.536940 TGGTGATGATTGTGTGCCTG 58.463 50.000 0.00 0.00 0.00 4.85
2735 3069 1.888512 GTTGGTGATGATTGTGTGCCT 59.111 47.619 0.00 0.00 0.00 4.75
2736 3070 1.888512 AGTTGGTGATGATTGTGTGCC 59.111 47.619 0.00 0.00 0.00 5.01
2737 3071 2.816087 AGAGTTGGTGATGATTGTGTGC 59.184 45.455 0.00 0.00 0.00 4.57
2738 3072 3.817084 ACAGAGTTGGTGATGATTGTGTG 59.183 43.478 0.00 0.00 0.00 3.82
2739 3073 4.090761 ACAGAGTTGGTGATGATTGTGT 57.909 40.909 0.00 0.00 0.00 3.72
2740 3074 5.443185 AAACAGAGTTGGTGATGATTGTG 57.557 39.130 0.00 0.00 0.00 3.33
2741 3075 6.469782 AAAAACAGAGTTGGTGATGATTGT 57.530 33.333 0.00 0.00 0.00 2.71
2780 3114 9.193806 AGGTGCAGAGATTGAACATAATAAAAT 57.806 29.630 0.00 0.00 37.03 1.82
2781 3115 8.579850 AGGTGCAGAGATTGAACATAATAAAA 57.420 30.769 0.00 0.00 37.03 1.52
2782 3116 8.579850 AAGGTGCAGAGATTGAACATAATAAA 57.420 30.769 0.00 0.00 37.03 1.40
2783 3117 8.579850 AAAGGTGCAGAGATTGAACATAATAA 57.420 30.769 0.00 0.00 37.03 1.40
2784 3118 8.579850 AAAAGGTGCAGAGATTGAACATAATA 57.420 30.769 0.00 0.00 37.03 0.98
2785 3119 7.472334 AAAAGGTGCAGAGATTGAACATAAT 57.528 32.000 0.00 0.00 37.03 1.28
2786 3120 6.899393 AAAAGGTGCAGAGATTGAACATAA 57.101 33.333 0.00 0.00 37.03 1.90
2787 3121 8.049117 AGATAAAAGGTGCAGAGATTGAACATA 58.951 33.333 0.00 0.00 37.03 2.29
2788 3122 6.888632 AGATAAAAGGTGCAGAGATTGAACAT 59.111 34.615 0.00 0.00 37.03 2.71
2789 3123 6.240894 AGATAAAAGGTGCAGAGATTGAACA 58.759 36.000 0.00 0.00 37.03 3.18
2790 3124 6.749923 AGATAAAAGGTGCAGAGATTGAAC 57.250 37.500 0.00 0.00 34.23 3.18
2791 3125 6.540189 GCTAGATAAAAGGTGCAGAGATTGAA 59.460 38.462 0.00 0.00 0.00 2.69
2792 3126 6.051717 GCTAGATAAAAGGTGCAGAGATTGA 58.948 40.000 0.00 0.00 0.00 2.57
2793 3127 6.054295 AGCTAGATAAAAGGTGCAGAGATTG 58.946 40.000 0.00 0.00 0.00 2.67
2794 3128 6.245890 AGCTAGATAAAAGGTGCAGAGATT 57.754 37.500 0.00 0.00 0.00 2.40
2795 3129 5.885449 AGCTAGATAAAAGGTGCAGAGAT 57.115 39.130 0.00 0.00 0.00 2.75
2796 3130 5.683876 AAGCTAGATAAAAGGTGCAGAGA 57.316 39.130 0.00 0.00 0.00 3.10
2797 3131 6.597280 AGAAAAGCTAGATAAAAGGTGCAGAG 59.403 38.462 0.00 0.00 0.00 3.35
2798 3132 6.476378 AGAAAAGCTAGATAAAAGGTGCAGA 58.524 36.000 0.00 0.00 0.00 4.26
2799 3133 6.749923 AGAAAAGCTAGATAAAAGGTGCAG 57.250 37.500 0.00 0.00 0.00 4.41
2800 3134 6.714810 TCAAGAAAAGCTAGATAAAAGGTGCA 59.285 34.615 0.00 0.00 0.00 4.57
2801 3135 7.145932 TCAAGAAAAGCTAGATAAAAGGTGC 57.854 36.000 0.00 0.00 0.00 5.01
2802 3136 8.119226 CGATCAAGAAAAGCTAGATAAAAGGTG 58.881 37.037 0.00 0.00 0.00 4.00
2803 3137 7.824779 ACGATCAAGAAAAGCTAGATAAAAGGT 59.175 33.333 0.00 0.00 0.00 3.50
2804 3138 8.119226 CACGATCAAGAAAAGCTAGATAAAAGG 58.881 37.037 0.00 0.00 0.00 3.11
2805 3139 8.660373 ACACGATCAAGAAAAGCTAGATAAAAG 58.340 33.333 0.00 0.00 0.00 2.27
2806 3140 8.443160 CACACGATCAAGAAAAGCTAGATAAAA 58.557 33.333 0.00 0.00 0.00 1.52
2807 3141 7.064609 CCACACGATCAAGAAAAGCTAGATAAA 59.935 37.037 0.00 0.00 0.00 1.40
2808 3142 6.535150 CCACACGATCAAGAAAAGCTAGATAA 59.465 38.462 0.00 0.00 0.00 1.75
2809 3143 6.042777 CCACACGATCAAGAAAAGCTAGATA 58.957 40.000 0.00 0.00 0.00 1.98
2810 3144 4.872691 CCACACGATCAAGAAAAGCTAGAT 59.127 41.667 0.00 0.00 0.00 1.98
2811 3145 4.245660 CCACACGATCAAGAAAAGCTAGA 58.754 43.478 0.00 0.00 0.00 2.43
2812 3146 3.997021 ACCACACGATCAAGAAAAGCTAG 59.003 43.478 0.00 0.00 0.00 3.42
2813 3147 3.994392 GACCACACGATCAAGAAAAGCTA 59.006 43.478 0.00 0.00 0.00 3.32
2814 3148 2.808543 GACCACACGATCAAGAAAAGCT 59.191 45.455 0.00 0.00 0.00 3.74
2815 3149 2.411547 CGACCACACGATCAAGAAAAGC 60.412 50.000 0.00 0.00 35.09 3.51
2816 3150 3.057019 TCGACCACACGATCAAGAAAAG 58.943 45.455 0.00 0.00 37.37 2.27
2817 3151 3.100658 TCGACCACACGATCAAGAAAA 57.899 42.857 0.00 0.00 37.37 2.29
2818 3152 2.804697 TCGACCACACGATCAAGAAA 57.195 45.000 0.00 0.00 37.37 2.52
2826 3160 1.667756 GCAGTAACATCGACCACACGA 60.668 52.381 0.00 0.00 46.04 4.35
2827 3161 0.713883 GCAGTAACATCGACCACACG 59.286 55.000 0.00 0.00 0.00 4.49
2828 3162 1.790755 TGCAGTAACATCGACCACAC 58.209 50.000 0.00 0.00 0.00 3.82
2829 3163 2.289382 ACATGCAGTAACATCGACCACA 60.289 45.455 0.00 0.00 0.00 4.17
2830 3164 2.346803 ACATGCAGTAACATCGACCAC 58.653 47.619 0.00 0.00 0.00 4.16
2831 3165 2.741517 CAACATGCAGTAACATCGACCA 59.258 45.455 0.00 0.00 0.00 4.02
2832 3166 3.000041 TCAACATGCAGTAACATCGACC 59.000 45.455 0.00 0.00 0.00 4.79
2833 3167 4.548916 CGATCAACATGCAGTAACATCGAC 60.549 45.833 12.41 0.00 36.22 4.20
2834 3168 3.551485 CGATCAACATGCAGTAACATCGA 59.449 43.478 12.41 0.00 36.22 3.59
2835 3169 3.551485 TCGATCAACATGCAGTAACATCG 59.449 43.478 11.81 11.81 35.82 3.84
2836 3170 5.663795 ATCGATCAACATGCAGTAACATC 57.336 39.130 0.00 0.00 0.00 3.06
2837 3171 5.819379 AGAATCGATCAACATGCAGTAACAT 59.181 36.000 0.00 0.00 0.00 2.71
2838 3172 5.178061 AGAATCGATCAACATGCAGTAACA 58.822 37.500 0.00 0.00 0.00 2.41
2839 3173 5.725110 AGAATCGATCAACATGCAGTAAC 57.275 39.130 0.00 0.00 0.00 2.50
2840 3174 9.710900 ATATAAGAATCGATCAACATGCAGTAA 57.289 29.630 0.00 0.00 0.00 2.24
2841 3175 9.710900 AATATAAGAATCGATCAACATGCAGTA 57.289 29.630 0.00 0.00 0.00 2.74
2842 3176 8.613060 AATATAAGAATCGATCAACATGCAGT 57.387 30.769 0.00 0.00 0.00 4.40
2843 3177 8.173775 GGAATATAAGAATCGATCAACATGCAG 58.826 37.037 0.00 0.00 0.00 4.41
2844 3178 7.879677 AGGAATATAAGAATCGATCAACATGCA 59.120 33.333 0.00 0.00 0.00 3.96
2845 3179 8.261492 AGGAATATAAGAATCGATCAACATGC 57.739 34.615 0.00 0.00 0.00 4.06
2871 3205 9.832445 ACACTTCTGTAGATTTAGACAAAAGAA 57.168 29.630 0.00 0.00 29.94 2.52
2887 3221 8.245491 TCGTAAATAATGTGCTACACTTCTGTA 58.755 33.333 0.00 0.00 35.11 2.74
2888 3222 7.094631 TCGTAAATAATGTGCTACACTTCTGT 58.905 34.615 0.00 0.00 35.11 3.41
2889 3223 7.520119 TCGTAAATAATGTGCTACACTTCTG 57.480 36.000 0.00 0.00 35.11 3.02
2890 3224 8.604035 CAATCGTAAATAATGTGCTACACTTCT 58.396 33.333 0.00 0.00 35.11 2.85
2891 3225 8.600625 TCAATCGTAAATAATGTGCTACACTTC 58.399 33.333 0.00 0.00 35.11 3.01
2892 3226 8.487313 TCAATCGTAAATAATGTGCTACACTT 57.513 30.769 0.00 0.00 35.11 3.16
2893 3227 8.662781 ATCAATCGTAAATAATGTGCTACACT 57.337 30.769 0.00 0.00 35.11 3.55
2894 3228 9.158364 CAATCAATCGTAAATAATGTGCTACAC 57.842 33.333 0.00 0.00 34.56 2.90
2895 3229 8.888716 ACAATCAATCGTAAATAATGTGCTACA 58.111 29.630 0.00 0.00 0.00 2.74
2896 3230 9.716507 AACAATCAATCGTAAATAATGTGCTAC 57.283 29.630 0.00 0.00 0.00 3.58
2898 3232 9.075519 CAAACAATCAATCGTAAATAATGTGCT 57.924 29.630 0.00 0.00 0.00 4.40
2899 3233 8.859156 ACAAACAATCAATCGTAAATAATGTGC 58.141 29.630 0.00 0.00 0.00 4.57
2906 3240 8.241367 GGTAGGAACAAACAATCAATCGTAAAT 58.759 33.333 0.00 0.00 0.00 1.40
2907 3241 7.308710 GGGTAGGAACAAACAATCAATCGTAAA 60.309 37.037 0.00 0.00 0.00 2.01
2908 3242 6.149807 GGGTAGGAACAAACAATCAATCGTAA 59.850 38.462 0.00 0.00 0.00 3.18
2909 3243 5.644636 GGGTAGGAACAAACAATCAATCGTA 59.355 40.000 0.00 0.00 0.00 3.43
2910 3244 4.457949 GGGTAGGAACAAACAATCAATCGT 59.542 41.667 0.00 0.00 0.00 3.73
2911 3245 4.457603 TGGGTAGGAACAAACAATCAATCG 59.542 41.667 0.00 0.00 0.00 3.34
2912 3246 5.975693 TGGGTAGGAACAAACAATCAATC 57.024 39.130 0.00 0.00 0.00 2.67
2913 3247 5.337491 GCATGGGTAGGAACAAACAATCAAT 60.337 40.000 0.00 0.00 0.00 2.57
2914 3248 4.021544 GCATGGGTAGGAACAAACAATCAA 60.022 41.667 0.00 0.00 0.00 2.57
2915 3249 3.509575 GCATGGGTAGGAACAAACAATCA 59.490 43.478 0.00 0.00 0.00 2.57
2916 3250 3.763897 AGCATGGGTAGGAACAAACAATC 59.236 43.478 0.00 0.00 0.00 2.67
2917 3251 3.778265 AGCATGGGTAGGAACAAACAAT 58.222 40.909 0.00 0.00 0.00 2.71
2918 3252 3.237268 AGCATGGGTAGGAACAAACAA 57.763 42.857 0.00 0.00 0.00 2.83
2919 3253 2.969821 AGCATGGGTAGGAACAAACA 57.030 45.000 0.00 0.00 0.00 2.83
2920 3254 3.191371 CAGAAGCATGGGTAGGAACAAAC 59.809 47.826 0.00 0.00 0.00 2.93
2921 3255 3.420893 CAGAAGCATGGGTAGGAACAAA 58.579 45.455 0.00 0.00 0.00 2.83
2922 3256 3.071874 CAGAAGCATGGGTAGGAACAA 57.928 47.619 0.00 0.00 0.00 2.83
2923 3257 2.787473 CAGAAGCATGGGTAGGAACA 57.213 50.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.